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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10939#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2957 fasta sequence
[AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTTCCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTCCGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCGCGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCCCTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCCCTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCATTTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTTGTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAATACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATTTGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCAATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACAGCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTTCTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGGGGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTCTCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTTCATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAAGGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAGTTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATCATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTATTTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGTGCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTCCTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCACATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAAAGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGACTAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTTCTGTTCGTTCTTCACCGAGCACTT-GGCATCTAATGAATGACTCCCATGTTGATTT-GATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTGAAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACATCTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAAAAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCC-TGGT-AGTGCTGC-TGACATTA-CCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAG-TTTGAGGACTTCGGTGACG-AAGATGAGACCCCTCTGCTTGGAAACCTTAAA-TTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACT-CGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACT-CAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGTGGGCCGGTGCCGTTCTTCTTCAAAAAAAAAAAAAA]
[+] EMBL AK069300 [AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTTCCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTCCGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCGCGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCCCTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCCCTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCATTTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTTGTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAATACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATTTGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCAATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACAGCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTTCTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGGGGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTCTCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTTCATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAAGGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAGTTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATCATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTATTTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGTGCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTCCTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCACATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAAAGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGACTAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTTCTGTTCGTTCTTCACCGAGCACTT GGCATCTAATGAATGACTCCCATGTTGATTT GATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTGAAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACATCTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAAAAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCC TGGT AGTGCTGC TGACATTA CCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAG TTTGAGGACTTCGGTGACG AAGATGAGACCCCTCTGCTTGGAAACCTTAAA TTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACT CGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACT CAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAG ]
[+] EMBL AU056091 [ TCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTNCTGTTCGTTCTTCACCGAGCACTTGGGCATCTAATGAATGACTCCCATGTTGATTTGGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGANAATACGAGTGGTGCAT TCCCGTTTCAGTATTGGAGANTATAGATGTGGATTNTCCAACAT ]
[+] EMBL AU082892 [ GTCCNTGGTAAGTGCTNCTTGACATTACCCAATTTGGACAGACCCTCAACTCTTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTTGAGGACTTCGGTGACGAAAGATGAGACCCCTCTGCTTGGAACCCTTAAA TTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATNCCGTCCACT CGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACT CAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGTGGGCCGGTGCCGTTCTTCTTCAAAAAAAAAAAAAA]
[+] EMBL AU056092 [ gtcnTGC TGACATTA CCAATTTGGACAGCCCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGNGTTTGAG TTTGAGGACTTCGGTGACG AAGATGAGACCCCTCTGCTTGGAAACCTTAAATTTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACTCCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCCAATGCAGAGCNGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAGGGANGNGNNTAAAAAa ]
[+] EMBL CF298016 [ AGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATTTGTTTGT ATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAaa ]
consensusID : consensus_10939#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence
[AAAGCGCGATTTGAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCAAGGGGCGCCTAAAAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTGGTGGGTTTTAGGGGTCCTGGTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGGCAAACGCCCAGGGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACTTGGGTGGCCAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGAAGGCTAAGGTTGAATTAGCATCTAAATTGACGAAGGGCCCCTGGATAGATAAGAACGTAACCCGGTTAGTAAGGAGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCCAACTCAATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAAAGCTTGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACAAATTTTATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTTTGAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA760799 [AAAGCGCGATTTGAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCAAGGGGCGCCTAAAAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTGGTGGGTTTTAGGGGTCCTGGTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGGCAAACGCCCAGGGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACTTGGGTGGCCAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGAAGGCTAAGGTTGAATTAGCATCTAAATTGACGAAGGGCCCCTGGATAGATAAGAACGTAACCCGGTTAGTAAGGAGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCCAACTCAATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAAAGCTTGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACAAATTTTATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTTTGAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10939#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence
[TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCCANGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTTATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCCACATCCTCTGGTGAGGAACCCACAGTTCTGGTGATAATTAGGAGAAGATGAACTAGTCAATGCAAACATCTTCCCTNNGGGGCCACTAAGGGATGCCCCTTTAT]
[+] EMBL C28329 [TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCCANGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTTATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCCACATCCTCTGGTGAGGAACCCACAGTTCTGGTGATAATTAGGAGAAGATGAACTAGTCAATGCAAACATCTTCCCTNNGGGGCCACTAAGGGATGCCCCTTTAT]
consensusID : consensus_10939#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 326 fasta sequence
[AGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGATCCCCCTAATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGTGATAGTGAGGTACATTTTTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAACATGCACTAGGAGTCCCATATTCATTTGTGAAAAACAGTGGCAATGTGGAACCCAAAAAACCCTGTCATGCCGTCACGTAGCGTAT]
[-] EMBL CF298015 [AGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGATCCCCCTAATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGTGATAGTGAGGTACATTTTTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAACATGCACTAGGAGTCCCATATTCATTTGTGAAAAACAGTGGCAATGTGGAACCCAAAAAACCCTGTCATGCCGTCACGTAGCGTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTT 60
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTC 120
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCG 180
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCC 240
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCC 300
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCAT 360
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTT 420
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAAT 480
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 ACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATT 540
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCA 600
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 ATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACA 660
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTT 720
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGG 780
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTC 840
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTT 900
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAA 960
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAG 1020
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATC 1080
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 ATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTAT 1140
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGT 1200
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTC 1260
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCAC 1320
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 ATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAA 1380
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 AGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGAC 1440
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCT 1500
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTA 1560
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAA 1620
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 AAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATT 1680
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACC 1740
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAAT 1800
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 ATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTT 1860
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CTGTTCGTTCTTCACCGAGCACTTGGCATCTAATGAATGACTCCCATGTTGATTTGATTA 1920
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAAT 1980
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 TTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTG 2040
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTG 2100
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 ------------------------------------------------AAAGCGCGATTT 12
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 AAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACAT 2160
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 GAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCAAGGGGCGCCTAA 72
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAA 2220
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 AAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTG-GTGGGTTTTAGGGGTCCTG 131
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 AAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCCTG 2280
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 GTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGGCAAACGCCCAG 191
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GTAGTGCTGCTGACATTACCAATTTGGACA-GACCCTCAACTCCTTCGCCAAAACGCAAG 2339
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 GGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACTTGGGTGGCCAA 251
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 CGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTGAGGACTTCGGTGACGAA 2399
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 GATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGAAGGCTAAGGTT 311
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GATGAGACCCCTCTGCTTGGAAACCTTAAATTCACATCAAAAGCTAAGAAGGCTAAGGTT 2459
consensus_10939#2 ---------------TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCC 45
consensus_10939#1 GAATTAGCATCTAAATTGA---CGAAGGGCCCCTGGATAGATAAGAACGTAACCCGGTTA 368
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GAATCAGCATCTAAATCGA---CGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTA 2516
consensus_10939#2 ANGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTT 105
consensus_10939#1 GTAAGG--AGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCCAACTCA 426
consensus_10939#3 ------------------------------------------------------------
consensus_10939#0 GTAAGG--AGTATGCCGTCCACTCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCA 2574
consensus_10939#2 ATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAG-TGA 164
consensus_10939#1 ATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAAAGCTTG 486
consensus_10939#3 --------------------------------AGTCACCCTCTTGGCAAAAAGAAGCTCG 28
consensus_10939#0 ATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCG 2634
consensus_10939#2 GGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCA 224
** * **** ** *
consensus_10939#1 GCA--TCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTT------TTT 538
consensus_10939#3 GCA--TCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTT------TTT 80
consensus_10939#0 GCA--TCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTT------TTT 2686
consensus_10939#2 GTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGC 284
* * * * * * ** *** * * * * *** *
consensus_10939#1 TTTTCCAGCT---GTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACA 595
consensus_10939#3 TTTTCCAGCT---GTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGATCCCCCT 137
consensus_10939#0 TTTTCCAGCT---GTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACA 2743
consensus_10939#2 ATCTCCCGTTTCAGTATTGGAGAATATAG-ATGTGGATTGTCCCACATCCTCTGGTGAGG 343
* *** * * *** * * * *** *** **** * ****
consensus_10939#1 AATTTTATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTT 655
consensus_10939#3 AATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGTGATAGTGAGGTACATTT 197
consensus_10939#0 AATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTT 2803
consensus_10939#2 AACCCACAGTTCTGGTGATAATTAGGAGAA--GATGAACTAGTCAATGCAAACATCTTCC 401
** * ** ** *** * * * * * * ** * * * * *
consensus_10939#1 TTGCTGCCTTTTGAAAAAAAAAAAAAAAAAAA---------------------------- 687
consensus_10939#3 TTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAACATGCACTAGGAGTCCC 257
consensus_10939#0 TTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCC 2863
consensus_10939#2 CTNNGGGGCCACTAAGGGATGCCCCTTTAT------------------------------ 431
* * *
consensus_10939#1 ------------------------------------------------------------
consensus_10939#3 ATATTCATTTGTGAAAAACAGTGGCAATGTGGA-ACCCAAAAAACCCTGTCATGCCGTCA 316
consensus_10939#0 AC-TTCATTTGTGAAAAACAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGT 2922
consensus_10939#2 ------------------------------------------------------------
consensus_10939#1 -----------------------------------
consensus_10939#3 CGTAGCGTAT------------------------- 326
consensus_10939#0 GGGCCGGTGCCGTTCTTCTTCAAAAAAAAAAAAAA 2957
consensus_10939#2 -----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||