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Oryza sativa
cluster # 10946 cluster # 10946       Sequences # 8       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10946#0 length = 1683 sequences # 8  
consensusID : consensus_10946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1683
fasta sequence 
                              [GCCGGCGGTTTCCGCAGCCGCGACTGCGGGCGCGAGCGCGAGCGCGAGGGGGGGAATCGGCCATGTCGAGGTGGCGCGCAGCCGCCGCGCGCATCTCGGCCGCGGCGGAATCGCGGCTGCTCTCCAGGGCCTTCTCGAGGGTGGGGACGCCCGCTCCCCAGCCCCCGTGCAGAGGCTTCTCCAAGGCCTCCGCCGCCGCCGCCGCGTCGTCGCGCGGCCCTGCCGCAGCCGCAGCCACCACCACCGCCACTGCCGCTGGGGCGAGGCCCGAGGTCAGACTGAATTCTATGTTCCTGTCAAAGCCCTGCTCGCTGGCATTGCCTCCTGACTCCCCTCTTCGAGTGGAAGATCCAAAGTTTGAGGGCATTAAGCATTTGATGCTCACGCTTTTGCTGTTCTACAGTAAGCAAAGCAAGTCCATTAGAGGAGCAAATGTTGTTTATCATCGCATCACTTCTCAAGTTGACAAGTCTGATATCTTTGATGTTTTTCAGTTGGAGAAAACATTTAAAACAACATTTTCATTACTTGTTCTCCATATGTGGCTTATTCTACGTCGCTTGAAAGAAGAAGGGAAGGATGGTGTTAAATTTGGACAGTACATCTATGAAATTTACAATCATGATGTGGAGCTTAGAGTTTCGAAAGCTGGGGTTAACTTGCTCTTGACAAAATGGATGAAAGAACTTGAGAAGATATTCTATGGGAACATTGTGAAATATGACTCTGCAATAAGCCCAGAAGCACGTCAGGATGATCTTGTAAATGTCATCTGGAGGAATGTGTATGCCGACGAAGGTTCAGAGGCTATGGATGCAGCAGCTGTCCCTGCTATCCAGGCATTGGCACGGTACACTCGGAGGGAGGCAACTTGCCTATCACTGACAGATAAAGAAGCTATGTTCTCTGGCAACTTCAAATTTACAGCCCTGCTGCCGAATTCTCCCAGCCCAGCGAAGCCTGTGCGGTGAACCATGACATGGTAGGTTGGTATCCCATGCGAAGATTGGTAAACAACATGGACAAAAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATCGTGGAATCCTTGCGAATCTGCCCCTTTTTTATGAC--TA---TTTCATCCTAGCTAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGG-TTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGT-CAAAGCTTCTCGAAT-CAGTTTAGTACATTCCCATCTTATGAATTGGTACGCCAATTGCTTTATTGACTGTTTATATCGTTTAAGGCAGCAACAGCTTTGACAGGGCCATCTAGTAGCAAGGTATTTGGTACTTCCTCCATCCTAGTAAAATATAGCAATCTATAGTATTTGATTAGACAGCTAGTATTAGTACTTGTTGTATCTAATTCAGAATGGGACACTTCCTATTACAATGAATCTGGACATGTTGGNTATTTTCTGTGACGGGAGGGAGTACTTTGGAATGGAGGGATGATTTACATCACATTCGAATAATATATTCCTCCGACTGANATGTGGTCCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068288             [GCCGGCGGTTTCCGCAGCCGCGACTGCGGGCGCGAGCGCGAGCGCGAGGGGGGGAATCGGCCATGTCGAGGTGGCGCGCAGCCGCCGCGCGCATCTCGGCCGCGGCGGAATCGCGGCTGCTCTCCAGGGCCTTCTCGAGGGTGGGGACGCCCGCTCCCCAGCCCCCGTGCAGAGGCTTCTCCAAGGCCTCCGCCGCCGCCGCCGCGTCGTCGCGCGGCCCTGCCGCAGCCGCAGCCACCACCACCGCCACTGCCGCTGGGGCGAGGCCCGAGGTCAGACTGAATTCTATGTTCCTGTCAAAGCCCTGCTCGCTGGCATTGCCTCCTGACTCCCCTCTTCGAGTGGAAGATCCAAAGTTTGAGGGCATTAAGCATTTGATGCTCACGCTTTTGCTGTTCTACAGTAAGCAAAGCAAGTCCATTAGAGGAGCAAATGTTGTTTATCATCGCATCACTTCTCAAGTTGACAAGTCTGATATCTTTGATGTTTTTCAGTTGGAGAAAACATTTAAAACAACATTTTCATTACTTGTTCTCCATATGTGGCTTATTCTACGTCGCTTGAAAGAAGAAGGGAAGGATGGTGTTAAATTTGGACAGTACATCTATGAAATTTACAATCATGATGTGGAGCTTAGAGTTTCGAAAGCTGGGGTTAACTTGCTCTTGACAAAATGGATGAAAGAACTTGAGAAGATATTCTATGGGAACATTGTGAAATATGACTCTGCAATAAGCCCAGAAGCACGTCAGGATGATCTTGTAAATGTCATCTGGAGGAATGTGTATGCCGACGAAGGTTCAGAGGCTATGGATGCAGCAGCTGTCCCTGCTATCCAGGCATTGGCACGGTACACTCGGAGGGAGGCAACTTGCCTATCACTGACAGATAAAGAAGCTATGTTCTCTGGCAACTTCAAATTTACAGCCCTGCTGCCGAATTCTCCCAGCCCAGCGAAGCCTGTGCGGTGAACCATGACATGGTAGGTTGGTATCCCATGCGAAGATTGGTAAACAACATGGACAAAAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATCGTGGAATCCTTGCGAATCTGCCCCTTTTTTATGACTATA   TTTCATCCTAGATAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGG TTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGT CAAAGCTTCTCGAAT CAGTTTAGTACATTCCCATCTTATGAATTGGTACGCCAATTGCTTTATTGACTGTTTATATCGTTTAAGGCAGCAACAGCTTTGACAGGGCCATCTAGTAGCAAGGTATTTGGTACTTCCTCCATCCTAGTAAAATATAGCAATCTATAGTATTTGATTAGACAGCTAGTATTAGTACTTGTTGTATCTAATTCAGAATGGGACACTTCCTATTACAATGAATCTGGACATGT                                                                                                                     ]
[+] EMBL AU166259             [GCCGGCGGTTTCCGCAGCCGCGACTGCGGGCGCGAGCGCGAGCGCGAGGGGGGGAATCGGCCATGTCGAGGTGGCGCGCAGCCGCCGCGCGCATCTCGGCCGCGGCGGAATCGCGGCTGCTCTCCAGGGCCTTCTCGAGGGTGGGGACGCCCGCTCCCCAGCCCCCGTGCAGAGGCTTCTCCAAGGCCTCCGCCGCCGCCGCCGCGTCGTCGCGCGGCCCTGCCGCAGCCGCAGCCACCACCACCGCCACTGCCGCTGGGGCGAGGCCCGAGGTCAGACTGAATTCTATGTTCCTGTCAAAGCCCTGCTCGCTGGCATTGCCTCCTGACTCCCCTCTTCGAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA765188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCTGCCGAATTCTCCCAGCCCAGCGAAGCCTGTGCGGTGAACCCTGACATGGTAGGTTGGTATCCCATGCGAAGATTGGTAAACAACATGGACAAAAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATCATGGAATCCTTGCGAATCTGCCCCTTTTTTATGAC  TATACTTTCATCCTAGATAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGGTTTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGT CAAAGCTTCTCGAAT CAGTTTAGTACATTCCCATCTTATGAATTGGTACGCCAATTGCTTTATTGACTGTTTATATCGTTTAAGGCAGCAACAGCTTTGACAGGGCCATCTAGTAGCAAGGTATTTGGTACTTCCTCCATCCTAGTAAAATATAGCAATCTATAGTATTTGATTAGACAGCTAGTATTAGTACTTGTTGTATCTAATTCAGAATGGGACACTTCCTATTACAATGAATCTGGACATGTTGGNTATTTTCTGTGACGGGAGGGAGTACTTTGGAATGGAGGGATGATTTACATCACATTC                                                        ]
[-] EMBL CB965667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTCCCAGCCCAGCGAAGCCTGTCCGGTGAACCATGACATGGTAGTTTGGTATCCCATGCGAAGATTGGTAAACTACATGGACTATAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATCGTGGAATCCTTGCGAATCTGCCCCTTTTTTATGAC  TA   TTTCATCCTAGCTAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGG TTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGACGTGGGAGAAGAATGTAGT CAAAGCTTCTCGAAT CAGTTTAGTACATTCCCATCTTATGAATTGGTACGCCAATTGCTTTATTGACTGTTTATATCGTT                                                                                                                                                                                                                                                                                             ]
[-] EMBL BU673479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGAAGCCTGTGCGGTGAACCATGACATGGTAGGTTGGTATCCCATGCGAAGATTGGTAAACAACATGGACAAAAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATCGTGGAATCCTTGCGAATCTGCCCCTTTTTTATGAC  TA   TTTCATCCTAGCTAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGG TTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGT C AAGCTTCTCGAAT CAGTTTAGTACATTCCC TCTTATGAATTGGTACGCC ATTGCTTTATTG CTG TTATATCGT                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB966819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGAAGCCTGTGCGGTGAACCATGACATGGTAGGTTGGTATCCCATGCGAAGATTGGTAAACAACATGGACAAAAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATCGTGGAATCCTTGCGAATCTGCCCCTTTTTTATGAC  TA   TTTCATCCTAGCTAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGG TTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGT CAAAGCTTCTCGAAT CAGTTTAGTACATTCCCATCTTATGAATTGGTACGCC ATTGCTTTATTGACTGTTTATATCGTT                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB964559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACACTTATTTATCGTGGAATCCTTGCGAATCTGCCCCTTTTTTATGAC  TA   TTTCATCCTAGCTAGGAATTTGTTTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGG TTGGATGTTTTCAATCTTATCATTTTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTATCCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGTCCAAAGCTTCTCGAATCCAGTTTAGTACATTCCCATCTTATGAATTGGTACGCCAATTGCTTTATTGACTGTTTATATCGTTTAAGGC                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU166260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAANAATGTAGT CAAAGCTTCTCGAAT CAGTTTAGTACATTCCCATCTTATGAATTGGNACGCCAATTGCTTTATTGACTGTTTATATCGTTTAAGGCAGCAACAGCTTTGACAGGGCCATNTAGTAGCAAGGTATTTGGTACTTCCTCCATCCTAGTAAAATATAGCAATCTATAGTATTTGATTAGACAGCTAGTATTAGNACTTGTTGTATCTAATTCAGAATGGGACNCTTCCTATTACAATGAATCTGGACATGTTGGTTA TTTCTGTGAC GGAGGGAGTACTTTGGAATGGA GGATGATTTACATCNCATCAGAATAATATATTCCTCCGACTGANATGTGGTCCAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10946#0
GCCGGCGGTTTCCGCAGCCGCGACTGCGGGCGCGAGCGCGAGCGCGAGGGGGGGAATCGG
CCATGTCGAGGTGGCGCGCAGCCGCCGCGCGCATCTCGGCCGCGGCGGAATCGCGGCTGC
TCTCCAGGGCCTTCTCGAGGGTGGGGACGCCCGCTCCCCAGCCCCCGTGCAGAGGCTTCT
CCAAGGCCTCCGCCGCCGCCGCCGCGTCGTCGCGCGGCCCTGCCGCAGCCGCAGCCACCA
CCACCGCCACTGCCGCTGGGGCGAGGCCCGAGGTCAGACTGAATTCTATGTTCCTGTCAA
AGCCCTGCTCGCTGGCATTGCCTCCTGACTCCCCTCTTCGAGTGGAAGATCCAAAGTTTG
AGGGCATTAAGCATTTGATGCTCACGCTTTTGCTGTTCTACAGTAAGCAAAGCAAGTCCA
TTAGAGGAGCAAATGTTGTTTATCATCGCATCACTTCTCAAGTTGACAAGTCTGATATCT
TTGATGTTTTTCAGTTGGAGAAAACATTTAAAACAACATTTTCATTACTTGTTCTCCATA
TGTGGCTTATTCTACGTCGCTTGAAAGAAGAAGGGAAGGATGGTGTTAAATTTGGACAGT
ACATCTATGAAATTTACAATCATGATGTGGAGCTTAGAGTTTCGAAAGCTGGGGTTAACT
TGCTCTTGACAAAATGGATGAAAGAACTTGAGAAGATATTCTATGGGAACATTGTGAAAT
ATGACTCTGCAATAAGCCCAGAAGCACGTCAGGATGATCTTGTAAATGTCATCTGGAGGA
ATGTGTATGCCGACGAAGGTTCAGAGGCTATGGATGCAGCAGCTGTCCCTGCTATCCAGG
CATTGGCACGGTACACTCGGAGGGAGGCAACTTGCCTATCACTGACAGATAAAGAAGCTA
TGTTCTCTGGCAACTTCAAATTTACAGCCCTGCTGCCGAATTCTCCCAGCCCAGCGAAGC
CTGTGCGGTGAACCATGACATGGTAGGTTGGTATCCCATGCGAAGATTGGTAAACAACAT
GGACAAAAAATATTCTATCAGCGTCATAAAATAACAGGAATTTCCCTACACTTATTTATC
GTGGAATCCTTGCGAATCTGCCCCTTTTTTATGACTATTTCATCCTAGCTAGGAATTTGT
TTTTTCTTTGCCTTGAGCTCACGGTAGGGACGTTGGTTGGATGTTTTCAATCTTATCATT
TTTGTCATGGCTGATTTGGACATGAGCATCATTTGTACGTGGGACTGGGTAGGCAAGTAT
CCGTACAGATCTGTCTACATCTCTAGTAGGGTTTGATGATGTGGGAGAAGAATGTAGTCA
AAGCTTCTCGAATCAGTTTAGTACATTCCCATCTTATGAATTGGTACGCCAATTGCTTTA
TTGACTGTTTATATCGTTTAAGGCAGCAACAGCTTTGACAGGGCCATCTAGTAGCAAGGT
ATTTGGTACTTCCTCCATCCTAGTAAAATATAGCAATCTATAGTATTTGATTAGACAGCT
AGTATTAGTACTTGTTGTATCTAATTCAGAATGGGACACTTCCTATTACAATGAATCTGG
ACATGTTGGNTATTTTCTGTGACGGGAGGGAGTACTTTGGAATGGAGGGATGATTTACAT
CACATTCGAATAATATATTCCTCCGACTGANATGTGGTCCAAAAAAAAAAAAAAAAAAAA
AAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)