cluster # 10956

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Oryza sativa
cluster # 10956 cluster # 10956 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10956#0 length = 980 sequences # 8
consensusID : consensus_10956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 980
fasta sequence
                              [GAGCTGATCAGCTGAACAGAACTGCCCCCAAGACTTGTGGAGTTGTAGCGAA-CTGCAAG-AGTGACGCGGCGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGACGACGGCGGCGTGGATGGCGCGGCACCGGGGGATGTACGAGCGGGCCACGAGGCACCCGTTCACCGTCTCCATCCGCGACGGCACCGTCGACCTGTCCGCCTTCAGACGCTGGCTGGGCCAGGACTACATGTTTGTGAAGGAATTTGTTGCGTTTCTAGCTAGTGTACTGCTCAAGTGTTGCAGACAGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAGCTTCCCTTAGTGAT-GAGCTCTCTTGGTTCAAGAAGGAAGCT-GAAAAATGGAGT-GTTAATCTAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATAC-T-GCAGGTT-TCTCCAAAGC-TTCAGCG-AGCCAGAGATCAGCTACG-TTGTTGCCATAACTACCTTTT-GGATAATTGAAACCGTGTACCAGGATAGC-TTTGCTTTCTG-TATAGAAGAAGGCAACAAGACGCCACCTGAACTCCTGGGGACCTGCCAGAGATGGGGAAGCCCTGAGTTCAAGCAGTACTGCCAGTCTCTGCAGAGAATTGCAGATCGCTGCCTCGCAGAAGCGTCAGCTGA-TGCTGCG-AGGAGTGCTG-AAGAGGCCTTCCTTCGGGTGCTTGAGCTGGAAATTGGTTTCTGGGA-CATGAGCTCTTCTCGATCATGAACGGCAA-CAGCATCTCGATCATGAACTACTTGGGAGAAATAATCGAATAATGGTGCAGCCGGTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTCTCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGCCGTTTCCTCCTNATCAAAAA]

[+] EMBL AK073626             [GAGCTGATCAGCTGAACAGAACTGCCCCCAAGACTTGTGGAGTTGTAGCGAAGCTGCAAG AGTGACGCGGCGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGACGACGGCGGCGTGGATGGCGCGGCACCGGGGGATGTACGAGCGGGCCACGAGGCACCCGTTCACCGTCTCCATCCGCGACGGCACCGTCGACCTGTCCGCCTTCAGACGCTGGCTGGGCCAGGACTACATGTTTGTGAAGGAATTTGTTGCGTTTCTAGCTAGTGTACTGCTCAAGTGTTGCAGACAGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAGCTTCCCTTAGTGAT GAGCTCTCTTGGTTCAAGAAGGAAGCT GAAAAATGGAGT GTTAATCTAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATAC T GCAGGTT TCTCCAAAGC TTCAGCG AGCCAGAGATCAGCTACG TTGTTGCCATAACTACCTTTT GGATAATTGAAACCGTGTACCAGGATAGC TTTGCTTTCTG TATAGAAGAAGGCAACAAGACGCCACCTGAACTCCTGGGGACCTGCCAGAGATGGGGAAGCCCTGAGTTCAAGCAGTACTGCCAGTCTCTGCAGAGAATTGCAGATCGCTGCCTCGCAGAAGCGTCAGCTGA TGCTGCG AGGAGTGCTG AAGAGGCCTTCCTTCGGGTGCTTGAGCTGGAAATTGGTTTCTGGGA CATGAGCTCTTCTCGATCATGAACGGCAA CAGCATCTCGATCATGAACTACTTGGGAGAAATAATCGAATAATGGTGCAGCCGGTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTCTCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGCC                   ]
[+] EMBL AU162647             [           CTGAACAGAACTGCCCCCAAGACTTGTGGAGTTGTAGCGAA CTGCAAG AGTGACGCGGCGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGACGACGGCGGCGTGGATGGCGCGGCACCGGGGGATGTACGAGCGGGCCACGAGGCACCCGTTCACCGTCTCCATCCGCGACGGCACCGTCGACCTGTCCGCCTTCAGACGCTGGCTGGGCCAGGACTACATGTTTGTGAAGGAATTTGTTGCGTTTCTAGCTAGTGTACTGCTCAAGTGTTGCAGACAGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAGCTTCCCTTAGTGATGGAGCTCTCTTGGTTCAAGAAGGAAGCT GAAAAATGGAGT GTTAATCTAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATAC T GCAGGTT TCTCCAAAGC TTCAGCG AGCCAGAGATCAGCTACG TTGTTGCCATAACTACCTTTT GGATAATTGAAACCGTGTACCAGGATAGC TTTGCTTTCTG TATAGANGAAGGCAACAAGACGCCACCNGAACTCCTGGGGA CTGCCAGAGATGGGGAAG CNTGAGTTCAAGCAGTACTGCCAG NTCTGCAGAGAATTGNAGATCGCTGCCTC                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU095631             [           CTGAACAGAACTGCCCCCAAGACTTGTGGAGTTGTAGCGAA CTGCAAG AGTGACGCGGCGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGACGACGGCGGCGTGGATGGCGCGGCACCGGGGGATGTACGANCGGGCCACGAGGCACCCGTTCACCGTCTCCATCCGCGACGGCACCGTCGACCTGTCCGCCTTCAGACGCTGGCTGGGCCAGGACTACATGTTTGTGAAGGAATTTGTTGCGTTTCTAGCTAGTGTACTGCTCAAGTGTTGCAGACAGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAGCTTCCCTTAGTGAT GAGCTCTCTTGGTTCAAGAAGGAAGCTGGAAAAATGGAGTGGTTAATCTAGCTGAAGTNTCTCCTCNGAAATCCAATACAGAATACTT GCAGGTTGTCTCCAAAGCTTTCAGCGAAGCCAGANATCAGCTACGTTTGTTGCCATAACTACCTTTTGGGATAATTTGAACCGTGTACCAGGATAGCTTTTGCTTTCTGNTATA                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU164858             [                               GACTTGTGGAGTTGTAGCG A CTGCAAGNAGTGACGCGGCGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGACGACGGCGGCGTGGATGGCGCGGCACCGGGGGATGTACGAGCGGGCCACGAGGCACCCGTTCACCGTCTCCATCCGCGACGGCACCGTCGACCTGTCCGCCTTCAGACGCTGGCTGGGCCAGGACTACATGTTTGTGAAGGAATTTGTTGCGTTTCTAGCTAGTGTACTGCTCAAGTGTTGCAGACAGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAGCTTCCCTTAGTGAT GAGCTCTCTTGGTTCAAGAAGGAAGCT GAAAAATGGAGT GTTAATCTAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATAC TGGCAGGTT TCTCCAAAGC TTCAGCG AGCCAGAGATCAGCTACG TTGTTGCCATAACTACCTTTT GGATAATTGAAACCGTGTACCAGGATAGC TTT CTTTCTG TATAGAAGAAGGCAACAAGACGCCACCTGAACTCCTGGGGACCTGCCAGAGATGGGGAAGCCCTGAGTTCAAGCAGTACTG CAGTCTCTGCAGAGAATTGCAGATCGCTGCCTCGCAGAAGCGTCA CTGAGTGCTGCGAAGGAGTGCTGAAAGAGGCCTTCCTTCGGGTGCTT                                                                                                                                                                                                                                                        ]
[+] EMBL AK063807             [                                                                                                                                                                                                                                                                                                                                AGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAGCTTCCCTTAGTGAT GAGCTCTCTTGGTTCAAGAAGGAAGCT GAAAAATGGAGT GTTAATCTAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATAC T GCAGGTT TCTCCAAAGC TTCAGCG AGCCAGAGATCAGCTACG TTGTTGCCATAACTACCTTTT GGATAATTGAAACCGTGTACCAGGATAGC TTTGCTTTCTG TATAGAAGAAGGCAACAAGACGCCACCTGAACTCCTGGGGACCTGCCAGAGATGGGGAAGCCCTGAGTTCAAGCAGTACTGCCAGTCTCTGCAGAGAATTGCAGATCGCTGCCTCGCAGAAGCGTCAGCTGA TGCTGCG AGGAGTGCTG AAGAGGCCTTCCTTCGGGTGCTTGAGCTGGAAATTGGTTTCTGGGA CATGAGCTCTTCTCGATCATGAACGGCAA CAGCATCTCGATCATGAACTACTTGGGAGAAATAATCGAATAATGGTGCAGCCGGTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTCTCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGCCGTTT               ]
[-] EMBL BI305554             [                                                                                                                                                                                                                                                                                                                                                                             CCCTTAGTGAT GAGCTCTCTTGGTTCAAGAAGGAAGCT GAAAAATGGAGT GTTAATCTAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATAC T GCAGGTT TCTCCANAGC TTCAGCG AGCCAGAGATCAGCTACG TTGTTGCCATAACTACCTTTT GGATAATTGAAACCGTGTACCAGGATAGC TTTGCTTTCTG TATAGAAGAAGGCAACAAGACGCCACCTGAACTCCTGGGGACCTGCCAGAGATGGGGAAGCCCTGAGTTCAAGCAGTACTGCCAGTCTCTGCAGAGAATTGCAGATCGCTGCCTCGCAGAAGCGTCAGCTGA TGCTGCG AGGAGTGCTG AAGAGGCCTTCCTTCGGGTGCTTGAGCTGGAAATTGGTTTCTGGGA CATGAGCTCTTCTCGATCATGAACGGCAA CAGCATCTCGATCATGAACTACTTGGGAGAAATAATCGAATAATGGTGCAGCCGGTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTCTCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGCCG                  ]
[+] EMBL AU056054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGAAGCGTCAGCTGA TGCTGCG AGGNGTGCTG AAGAGGCCTTCCTTCGGGTGCTTGAGCTGGAAATTGGTTTCTGGGA CATGAGCTCTTCTCGATCATGAACGGCAA CAGCATCTCGATCATGAACTACTTGGGAGAAATAATCGAATAATGGTGCAGCCGGTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTCTCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGCCGTTTCCTCCTNATCAAAAA]
[+] EMBL AU056053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CG AGGAGTNCTG AAGAGGCCTNCTTTCGGGTGCNTGAGCTGGAAATTGGTTTCTGGGACCATGAGNTCTTCTCGATCATGAACGGCAACCAGCATCTCGATCATGANCTACTTGGGAGANATAATCGAATAATGGTGCAGCCGGTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTCTCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGCCGTTTCCTCNTNATCAAAAA]




>consensus_10956#0
GAGCTGATCAGCTGAACAGAACTGCCCCCAAGACTTGTGGAGTTGTAGCGAACTGCAAGA
GTGACGCGGCGGCGGCGATGGACGGCGGCGGGGTCGAGGCGGCGATGGACGGCGGCGGGG
TCGAGGCGGCGACGACGGCGGCGTGGATGGCGCGGCACCGGGGGATGTACGAGCGGGCCA
CGAGGCACCCGTTCACCGTCTCCATCCGCGACGGCACCGTCGACCTGTCCGCCTTCAGAC
GCTGGCTGGGCCAGGACTACATGTTTGTGAAGGAATTTGTTGCGTTTCTAGCTAGTGTAC
TGCTCAAGTGTTGCAGACAGTCAGATGGCTCGGACATGGAAATAATACTCGGTGGCTTAG
CTTCCCTTAGTGATGAGCTCTCTTGGTTCAAGAAGGAAGCTGAAAAATGGAGTGTTAATC
TAGCTGAAGTTTCTCCTCTGAAATCCAATACAGAATACTGCAGGTTTCTCCAAAGCTTCA
GCGAGCCAGAGATCAGCTACGTTGTTGCCATAACTACCTTTTGGATAATTGAAACCGTGT
ACCAGGATAGCTTTGCTTTCTGTATAGAAGAAGGCAACAAGACGCCACCTGAACTCCTGG
GGACCTGCCAGAGATGGGGAAGCCCTGAGTTCAAGCAGTACTGCCAGTCTCTGCAGAGAA
TTGCAGATCGCTGCCTCGCAGAAGCGTCAGCTGATGCTGCGAGGAGTGCTGAAGAGGCCT
TCCTTCGGGTGCTTGAGCTGGAAATTGGTTTCTGGGACATGAGCTCTTCTCGATCATGAA
CGGCAACAGCATCTCGATCATGAACTACTTGGGAGAAATAATCGAATAATGGTGCAGCCG
GTTCCATACCGAACCCTGCAGTGTACTACTGTGTTTTCCTCTTCCTTTTATCCCCATTTC
TCTCCTTACTCCCATGAACATTGATGTATCATCGTAACTATGAAATAAATGAAATAATGC
CGTTTCCTCCTNATCAAAAA
clustalw multiple alignements is not computed in this case