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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10980#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1449 fasta sequence
[CCCCTTTATGTTTTATTTT--ATTCACAATCATCGTGCAAAGCTTATTTGACCATGA-TAAATGC-ATATTCA-ATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAAGCATGGAGGGCATGAGACTAGAGTTGTACTAGGGGAGATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCGGTCCAAAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAGGCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAAAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCCTTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGCACTTCGGTAGCAACCAAGACACACCCTGCTTCTGGCATTGTAATAGGGTGAGCCCACTTTTGAGGAAGCTGGTGTGCTGGTTCTCCTGATGATGTTTTCTGCTCTGCGGGTGCACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCAGTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGAGCTGTCACCTGTGGAGGCCGCATCGTCATTTCCAGATTTCACTACAAGAACCCCGAATGCAATATCTCCCAGTTCCCATCATGGCTCTGCATACATCCATTTTGAATGTAGAATCCAGGTTTTAATCCATTATCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCTTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGGGAGTGGGAGTGAGGACCGCAAGGGGCTGC]
[+] EMBL CB648347 [CCCCTTTATGTTTTATTTTCCATTCACAATCATCGTGCAAAGCTTATTTGAGCATGACTAAATGCTCTATTCACATAGTTGCATACATACCAGTTGCTAGTTGCTACAAAAAGCATGGAGGGCATGAAACTAGAGTTGTACTAGGGGAAATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCGGTCCAAAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCACCTCCGTGCTGCAGGAGGCAACGGCCCATTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACAAAAAACCTCAGGGCCTGGCTCTTAATTGCCCCACTCTTCATCAAAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCCAACCCCTTGAGACGAAAGTTGTCACTGGCCCTCACCAGAAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGAAATGATGGATTCACATTCTTGATCTTTGTGTAAAGTGGACGGTTCAGGATGACTCCAAACG ]
[+] EMBL CB668509 [ ccTTTTTTTTT TTTCGCAATCATCGTGCAGAGCTTATTTGACCATGA TAAATGC ATATTCA ATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAAGCATGGAGGGCATGAGACTAGAGTTGTACTAGGTGAGATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCGGTCCAGAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAGGCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAGAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCCTTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGCACTTCGGTAGCAACCAAGACACACCCTGCT ]
[+] EMBL CB666665 [ GCTTATTTGACCATGA TAAATGC ATATTCA ATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAAGCATGGAGGGCATGAGACTAGAGTTGTACTAGGGGAGATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCACCTGCAATATCTCGGTCCAAAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAGGCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAAAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCCTTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGT ]
[-] EMBL CB648346 [ CCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTTGAAGATGCTATCATCGTCAAGCACTTCGGTAGCAACCAAGACACACCCTGCTTCTGGCATTGTAATAGGGTGAGCCCACTTTTGAGGAAGCTGGTGTGCTGGTTCTCCTGATGATGTTTTCTGCTCTGCGGGTGCACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCAGTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGAGCTGTCACCTGTGGAGGCCGCATCGTCATTTCCAGATTTCACTACAAGAACCCCGAATGCAATATCTCCCAGTTCCCATCATGGCTCTGCATACATCCATTTTGAATGTAGAATCCAGGTTTTAATCCATTATCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCTTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGGGAGTGGGAGTGAGGACCGCAAGGGGCTGC]
consensusID : consensus_10980#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1334 fasta sequence
[TTTTTTTCCCATTTCGGCATTTGCCATCATCCATTCGCAATCATCGTGCAGAGCTTATTTGAGCATGATAAATGCATATTCAATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAAGCATGGAGGGCATGAGACTAGAGTTGTACTAGGTGAGATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCGGTCCAGAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAGGCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAGAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCCTTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGCACTTC-GGTAGCAACCAAGACACACCCTGCTTCTGGCATTGTAATAGGGTGAGCCCACTTTTGAGGAAGCTGGTGTGCTGGTTCTCCTGATGATGTTTTCTGCTCTGCGGGTGCACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCAGTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGAGCTGTCACCTGTGGAGGCCGCATCGTCATTTCCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGGGA]
[-] EMBL BP184635 [TTTTTTTCCCATTTCGGCATTTGCCATCATCCATTCGCAATCATCGTGCAGAGCTTATTTGAGCATGATAAATGCATATTCAATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAAGCATGGAGGGCATGAGACTAGAGTTGTACTAGGTGAGATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCGGTCCAGAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAGGCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAGAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCCTTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGCACTTCGGGTAGCAACCAAGACACACCCTGCTTCTGGCATTGTAATAGGGTGAGCCCACTTTTGAGGAAGCTGGTGTGCTGGTTCTCCTGATGATGTTTTCTGCTCTGCGGGTGCACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCAGTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGAGCTGTCACCTGTGGAGGCCGCATCGTCATTTCCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCG ]
[-] EMBL AK067880 [ TCATCGTGCAGAGCTTATTTGAGCATGATAAATGCATATTCAATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAAGCATGGAGGGCATGAGACTAGAGTTGTACCAGGTGAGATTTATCCTATTTCAATTATGTACAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTCGTTGTCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCGGTCCAGAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAGGCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCGTGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAGAACAGCAGCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCCTTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGCACTTC GGTAGCAACCAAGACACACCCTGCTTCTGGCATTGTAATAGGGTGAGCCCACTTTTGAGGAAGCTGGTGTGCTGGTTCTCCTGATGATGTTTTCTGCTCTGCGGGTGCACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCAGTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGAGCTGTCACCTGTGGAGGCCGCATCGTCATTTCCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGGGA]
[-] EMBL CB668508 [ GTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCGAAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTCTTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCTCTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGCACTTC GGTAGCAACCAAGACACACCCTGCTTCTGGCATTGTAATAGGGTGAGCCCACTTTTGAGGAAGCTGGTGTGCTGGTTCTCCTGATGATGTTTTCTGCTCTGCGGGTGCACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCAGTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGAGCTGTCACCTGTGGAGGCCGCATCGTCATTTCCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGAGGGAGGA ]
consensusID : consensus_10980#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 762 fasta sequence
[CGTCATTTCCAGATTTCACTACAAGACCCCCGAATGCAATATCTCCCAGTTCCCATCATGGCTCTGCATACATCCATTCTGAATGTAGAATCCAGGTTTTAATCCATTATCTAGAAAAATGAAGAAGCTACTAATCAATATCAGAACCAATTCGATCACAAAAATGTCAGGGTTAGATAAAATTAGCTAGTGACTAGATTACTCTTCCAATTTCGCTAATTTAACCCAAATTTCCACTGCTGTCTCGTCAATCAGTTGCACAAAAAGACCACCACCGGCCGGAGAATTTGGAGCATGTCACCCCGCCCAATTCCCCAATTCCCCAACCGCATGGCATATACGAGAAAAGGTTCTTTTTCCAATCGCGCCAAGATCCCACCTTTTTCCCGGCTCCAGAAAAATTGGGGGTACAATTTTTACTTGTCGGAAAAGGGGAGTCTCTCTCACCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCTGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGGGAGTGGGAGTGAGGCCCGCACGAGGCTG]
[-] EMBL CB666664 [CGTCATTTCCAGATTTCACTACAAGACCCCCGAATGCAATATCTCCCAGTTCCCATCATGGCTCTGCATACATCCATTCTGAATGTAGAATCCAGGTTTTAATCCATTATCTAGAAAAATGAAGAAGCTACTAATCAATATCAGAACCAATTCGATCACAAAAATGTCAGGGTTAGATAAAATTAGCTAGTGACTAGATTACTCTTCCAATTTCGCTAATTTAACCCAAATTTCCACTGCTGTCTCGTCAATCAGTTGCACAAAAAGACCACCACCGGCCGGAGAATTTGGAGCATGTCACCCCGCCCAATTCCCCAATTCCCCAACCGCATGGCATATACGAGAAAAGGTTCTTTTTCCAATCGCGCCAAGATCCCACCTTTTTCCCGGCTCCAGAAAAATTGGGGGTACAATTTTTACTTGTCGGAAAAGGGGAGTCTCTCTCACCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCGCCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCTGACGCGCCCACCGCCACCAGCGCCATGCCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCCTCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTCAGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGGGAGTGGGAGTGAGGCCCGCACGAGGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10980#0 -------------CCCCTTTATGTTTTATTTTATTCACAATCATCGTGCAAAGCTTATTT 47
consensus_10980#1 TTTTTTTCCCATTTCGGCATTTGCCATCATCCATTCGCAATCATCGTGCAGAGCTTATTT 60
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 GACCATGATAAATGCATATTCAATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAA 107
consensus_10980#1 GAGCATGATAAATGCATATTCAATAGTTGCATACATAGCAGTTGCTAGTTGCTACAAGAA 120
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 GCATGGAGGGCATGAGACTAGAGTTGTACTAGGGGAGATTTATCCTATTTCAATTATGTA 167
consensus_10980#1 GCATGGAGGGCATGAGACTAGAGTTGTACTAGGTGAGATTTATCCTATTTCAATTATGTA 180
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 CAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTG 227
consensus_10980#1 CAGGACAGATACAACCTTTAGCTGTTTGTCATGGTACATATGAGCAGCATCTACTGGTTG 240
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 TCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCG 287
consensus_10980#1 TCTTCCTTTGGTTTCTGGCTGAGCTCCGAGTAATGCCCTCCCATCAGCTGCAATATCTCG 300
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 GTCCAAAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAG 347
consensus_10980#1 GTCCAGAGACAAGAAGGATCGCCTGTCAGTGCATCGCTGATCAGCTCCGTGCTGCAGGAG 360
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 GCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCG 407
consensus_10980#1 GCGACGGCCCAGTATCCTGCCCTGATCTCGCTCAACAGCTGCTCGTAATCCCACGCAGCG 420
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 TGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAAAACAGCA 467
consensus_10980#1 TGCCCGACGAAGAACCTCAGGTCCTGGCTCTTAATTGCCCCACTCTTCATCAGAACAGCA 480
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 GCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCC 527
consensus_10980#1 GCCTTCTCTAGGTCGGTCCGGAAGCCAAAGCGAATGCCTGGTATGACCTCCTCGAACCCC 540
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 TTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCG 587
consensus_10980#1 TTGAGACGAGAGTTGTCACTGGCCCTCACCAGGAACATGCTCATGTCGACAGGGCCTCCG 600
consensus_10980#2 -------------------------------------------------CGTCATTTCCA 11
* ***
consensus_10980#0 AAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTC 647
consensus_10980#1 AAGAAGAGGGGGGAGTCACCGAACGGAGTTGCCTGGTCCTGGAATGATGGATTCACATTC 660
consensus_10980#2 GATTTCACTACAAGACCCCCGAATGCAATATCTCCCAGTTCCCATCATGGCTCTGCAT-- 69
* * * ***** * * * * * ** **** * ***
consensus_10980#0 TTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCT 707
consensus_10980#1 TTGATCTTTGTGTAGAGTGGACGGTTCAGGATGACTCCAAACGGGCTATCAAATGTGCCT 720
consensus_10980#2 ---ACATCCATTCTGAATGTAGAATCCAGG-----TTTTAATCCATTATCTAGAAAAATG 121
* * * ** ** * * **** * ** **** *
consensus_10980#0 CTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGC 767
consensus_10980#1 CTGGAACCTAGTCTAAGGAGGAGAATGACAGTTCTTTCGAAGATGCTATCATCGTCAAGC 780
consensus_10980#2 AAGAAGCTACTAATCAATATCAGAACCAATTCGATCACAAAAATGTCAGGGTTAG-ATAA 180
* * * * * * **** * * * ** *** * * *
consensus_10980#0 ACTTCGGTAGCAACCAAGACACACC-CTGCTTCTGGCATTGTAATAGGGTGAGCCCACTT 826
consensus_10980#1 ACTTCGGTAGCAACCAAGACACACC-CTGCTTCTGGCATTGTAATAGGGTGAGCCCACTT 839
consensus_10980#2 AATTAGCTAGTGACTAGATTACTCTTCCAATTTCGCTAATTTAACCCAA-ATTTCCACTG 239
* ** * *** ** * ** * * ** * * * *** *****
consensus_10980#0 TTGAGGAAGCTGGTGTGCTGGTT-CTCCTGATGATGTTTTCTGCTCTGCGGGT-----GC 880
consensus_10980#1 TTGAGGAAGCTGGTGTGCTGGTT-CTCCTGATGATGTTTTCTGCTCTGCGGGT-----GC 893
consensus_10980#2 CTGT-----CTCGTCAATCAGTTGCACAAAAAGACCACCACCGGCCGGAGAATTTGGAGC 294
** ** ** *** * * * ** * * * * * * **
consensus_10980#0 ACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCA 940
consensus_10980#1 ACTTGGATCTACCAAGAGCTCCTGCTCCCGGCGCACAAGGTTTGCTCTGACATCTCTCCA 953
consensus_10980#2 ATGTCACCCCGCCCAATTCCCCAATTCCCCAACCGCATGGCATATACGAGAAAAGGTTCT 354
* * * ** * * ** **** * ** ** * * * * *
consensus_10980#0 GTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGA 1000
consensus_10980#1 GTAATTGCTGTTAGAGATATTGGATTTGGATTCGTTATGCAGTTGGTTCAATCCATCAGA 1013
consensus_10980#2 TTTTCCAATCGCGCCAAGATCCCACCTTTTTCCCGGCTCCAGAAAAATTGG--GGGTACA 412
* * * ** * * * * * *** * * *
consensus_10980#0 GCTGTCACCTGTGGAGGCCGCATCGTCATTTCCAGATTTCACTACAAGAACCCCGAATGC 1060
consensus_10980#1 GCTGTCACCTGTGGAGGCCGCATCGTCATTTCC--------------------------- 1046
consensus_10980#2 ATTTTTACTTGTCGGAAAAGGGGAGTCTCTCTCA-------------------------- 446
* * ** *** * * *** * *
consensus_10980#0 AATATCTCCCAGTTCCCATCATGGCTCTGCATACATCCATTTTGAATGTAGAATCCAGGT 1120
consensus_10980#1 ------------------------------------------------------------
consensus_10980#2 ------------------------------------------------------------
consensus_10980#0 TTTAATCCATTATCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCG 1180
consensus_10980#1 --------------GGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCG 1092
consensus_10980#2 ------------CCGGAAGAAGACGAGGCCTTGCTCTTGGCCTCATCGTCCCCGCCATCG 494
**********************************************
consensus_10980#0 CCGCCGCTTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATG 1240
consensus_10980#1 CCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCCGACGCGCCCACCGCCACCAGCGCCATG 1152
consensus_10980#2 CCGCCGCCTGGGCCGTCCTTGCCCCTCCTCCCTGACGCGCCCACCGCCACCAGCGCCATG 554
******* ************************ ***************************
consensus_10980#0 CCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCC 1300
consensus_10980#1 CCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCC 1212
consensus_10980#2 CCGCGCCTCCCCCCGACCCTCCTCCCCGCCCACGCCGCCGCCACGGAGCACGGGGCGGCC 614
************************************************************
consensus_10980#0 TCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTC 1360
consensus_10980#1 TCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTC 1272
consensus_10980#2 TCGCCGGCGGCGAGGGGGCGCCGCCTCGGCGTGAGGCAGGGCCCCCCGCCGCCCGCCTTC 674
************************************************************
consensus_10980#0 AGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGG 1420
consensus_10980#1 AGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGG 1332
consensus_10980#2 AGGTTGAGGGCCCACATGGCCGTGGCCGCGCGGAGATGGGGGAGGAGGAGAGAAGCGTGG 734
************************************************************
consensus_10980#0 GAGTGGGAGTGAGGACCGCAAGGGGCTGC 1449
consensus_10980#1 GA--------------------------- 1334
consensus_10980#2 GAGTGGGAGTGAGGCCCGCACGAGGCTG- 762
**
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||