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Oryza sativa
cluster # 10990 cluster # 10990       Sequences # 8       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10990#0 length = 1412 sequences # 8  
consensusID : consensus_10990#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1412
fasta sequence 
                              [AGGGAAAGGGTCGAGAGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA-CCG-CAAGTTCCTGCCTATAG-TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA-CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT-GGGGTTTC-TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA-TTGA-CTTGTGATCAA-TGCCCTGGCACAAGTGCGACAGATTC-TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA-TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGATGGTTTTGCTATTTGCCGCCCAAATCTGCGTTGAAAATGAAATGTACAG]

[+] EMBL AK059475             [AGGGAAAGGGTCGAGAGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA TTGA CTTGTGATCAA TGCCCTGGCACAAGTGCGACAGATTC TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGA                                                 ]
[+] EMBL AK102993             [               AGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA TTGA CTTGTGATCAA TGCCCTGGCACAAGTGCGACAGATTC TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGATGGTTTTGCTATTTGCCGCCCAAATCTGCGTTGAAAATGAAATGTACAG]
[+] EMBL OSC109201            [                                            CGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BP184953             [                                         acgaGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAACCCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BP184850             [                                               acgaGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA753516             [                                                                                                                                                                                                                  nGGAGAAGAGAACATTNCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGTTATTACAATGAATGGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACCAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCCACAA CCGCCAAGTTCCTGCCTATAGTTGCCACAGCACCAGATCCGCATTCCTCCACCCTTCCATCCCCATGCTGTTGTGCGAATGTACCCCCTGGTATTAGTCTCCTGCTGTTCAACTGGCCCGACGAGTGGGGGGTTCTTTCTTGTATTCCACCAGGTGGTGGTTGTACCTTATTATTTGACCTTGTGAACAATTCCCCCGGCCCCAGTCCCACAAAATCTTACTGGACCCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA763923             [                                                                                                                                                                                                                                                                                             aaggggGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAACAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCACATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA TTGA CTTTTGATCAA TGCCCTGGCACAAGTGCAACAGATTC TACTGGAGCAACCTGCGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTNCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGNGATCNTGNCGGTGGCTTAAATGCATGGTACGCAGCGGGGNTTTACACTGGCAGGTACCTTATGCAGCAGTCCATGNAAAATACCAGACAAGGCTGACTTTTATTAAAAAGNCATTTGGAGGATCGNCNAANAGGTCCTTT CNCTNCAG AAAATCAAAAAATCTATTGGCAACTCGGGGAACTGGACATTCa                                                                                                                                                                                                                        ]
[+] EMBL BP184851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTTGTAGCATATCA TTGA CTT TGATCAA TGCCCTGGCACAAGTGCGACAGATTC TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGATTCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAAAAAaa                                                              ]




>consensus_10990#0
AGGGAAAGGGTCGAGAGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGAT
GGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGT
CGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGA
ACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGC
CGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACC
ATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCT
GGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGA
GCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTA
TGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAA
TTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAACCGCAAGTTCCTGCCTATAGTGC
CACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTACC
CCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGTGGGGTTTCTTCTTGTATGCA
ACCAAGTGGTGGTTGTAGCATATCATTGACTTGTGATCAATGCCCTGGCACAAGTGCGAC
AGATTCTACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGATCA
AGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGAT
ATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCC
TATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTT
AAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAA
AAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCC
TTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTA
GCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATT
TGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCC
AAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGATGGTTTTGCTATTTGCC
GCCCAAATCTGCGTTGAAAATGAAATGTACAG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)