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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11000#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1678 fasta sequence
[AGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCTTCGCTTTCTTGTGATGTTGGCCTCACTCGAAGCGTCTGCACAGTAACAATAAAAAGCATGACAGCCTTATATATTTCTCGAAATCTGGGAAAAATCTCACTCATATGATGGGAACGAGCGTCTTCAATGAGTGAGCCACATGCGAGAAATCGCTCCCGAGTCCCGGCTCCATGAGCACTACTCGTCCGGTCAGAACAACATCAAATCGCTTATATACAAACCTGCCGAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCGTCATCGGCGCTGGGTCTGGTGGGATAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCCTCATCGGCGCTGGGTCTGGTGGGATTTAATACCCTTTGTTTTCCTCTGAAAAGGAGGAAGAATGCCGTGATAATAGCGCGTAGCCGGCAGGAGATACAAATCCAGAAGAGCATTCTTCGTCATCCTTCATCCTGGTTGTTGTCTGCCATTGTTGTGGTCTAAGCGTATGATCAAATCATTCTAAATAGCTATCTTGTTTTAAATCAAGATGTGATATGTCATTCTAAATACTTCTATCCATTCACAAGAGTAATACCTATTTCATATTTTAGTTTTTTAAAACAAGTTGTTTTTATTTGTAGTCTTTTTACACCAAGATTCAAATGAAGAGGTAAATTAA]
[+] EMBL AK063948 [AGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCTTCGCTTTCTTGTGATGTTGGCCTCACTCGAAGCGTCTGCACAGTAACAATAAAAAGCATGACAGCCTTATATATTTCTCGAAATCTGGGAAAAATCTCACTCATATGATGGGAACGAGCGTCTTCAATGAGTGAGCCACATGCGAGAAATCGCTCCCGAGTCCCGGCTCCATGAGCACTACTCGTCCGGTCAGAACAACATCAAATCGCTTATATACAAACCTGCCGAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCGTCATCGGCGCTGGGTCTGGTGGGATAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCCTCATCGGCGCTGGGTCTGGTGGGATTTAATACCCTTTGTTTTCCTCTGAAAAGGAGGAAGAATGCCGTGATAATAGCGCGTAGCCGGCAGGAGATACAAATCCAGAAGAGCATTCTTCGTCATCCTTCATCCTGGTTGTTGTCTGCCATTGTTGTGGTCTAAGCGTATGATCAAATCATTCTAAATAGCTATCTTGTTTTAAATCAAGATGTGATATGTCATTCTAAATACTTCTATCCATTCACAAGAGTAATACCTATTTCATATTTTAGTTTTTTAAAACAAGTTGTTTTTATTTGTAGTCTTTTTACACCAAGATTCAAATGAAGAGGTAAATTAA]
[-] EMBL CB647641 [ CGTG TTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCT ]
consensusID : consensus_11000#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1266 fasta sequence
[CTCGCCCCGCTCGCTCGGGCAGCGCACACCACGCGGCGTCCCTCCCGCTCCCCCTCGCCGCTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGGAGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTTTTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGGAAAGGTGGGGAGTTAACCCACGATGAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATGACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATGCAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTCAGAAGGTTGTGAAGAATCTTCCCTCCACTAAGAAGATGGAAGAGCTGCCCCAAC]
[+] EMBL CB647640 [CTCGCCCCGCTCGCTCGGGCAGCGCACACCACGCGGCGTCCCTCCCGCTCCCCCTCGCCGCTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGGAGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCCTATCCGATAAGCAAGCTGCTGGACCCTCTGCTTGGTAAAGGTCATACAGCTCTTTTCCG ]
[+] EMBL CB680396 [ GTCCCCCCTTCTCCCCCTCGCCGCTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGGAGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTTTTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGGAAAGGTGGGGAGTTAACCCAC ]
[+] EMBL CB000109 [ TCCTTGATAGCTTGGTGACTGCTTGGGGTGCCCTTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTTTTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGTAAAGGTGGGGAGTTAACCCACGATGAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATGACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATGCAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTCAGAAGGTTGTGAAGAATCTTCCCTCCACTAAGAAGATGGAAGAGCTGCCCCAAC]
consensusID : consensus_11000#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence
[AATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAAGAAAAGAGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAAAAAAAAAAAAGAAAAACTCGAGAC]
[-] EMBL CF305683 [AATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAAGAAAAGAGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAAAAAAAAAAAAGAAAAACTCGAGAC]
consensusID : consensus_11000#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 494 fasta sequence
[CAGATGTTCTTCAAATACCACTGAAGACCCATTGCCGACCCTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAA-CGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTCCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACACGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTC-ATGGTGCTCCTTCGGAAGGCTTCGCTTTCTAAAAAAAAAA]
[+] EMBL BI804907 [CAGATGTTCTTCAAATACCACTGAAGACCCATTGCCGACCCTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAA CGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTCCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACACGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTC ATGGTGCTCCTTCGGAAGGCTTCGCTTTCTAAAAAAAAAA]
[+] EMBL BI804884 [ GAGGATGTCATAGAAGA CTGCTCCAGGAGGAGATATCCGATGAGCCAGACGTACATGTTGAAGAAC ATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGT CCATACCTTTCTTTT GCTGAGGGGAAGTCCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACCGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGT CAGTAGTAGAGAGGGACCAA GGTTGTGTGATTTTGCTTGGTCCTGGGACA GTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGT CCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCTTCGCTTTCTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 ---------------------------AGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCA 33
consensus_11000#1 CTCGCCCCGCTCGCTCGGGCAGCGCACACCACGCGGCGTCCCTCCCGCTCCCCCTCGCCG 60
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 CGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAAGTCCTTGACAAAGG 93
consensus_11000#1 CTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCG 120
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 TCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGT 153
consensus_11000#1 GAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGG 180
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 GAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCG 213
consensus_11000#1 AGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCT 240
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 CAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAA 273
consensus_11000#1 TCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATG--TCGGGGCT 298
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 GGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACC 333
consensus_11000#1 CACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCAC 358
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 TCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGA 393
consensus_11000#1 CGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCT 418
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 GA-AGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGA 452
consensus_11000#1 GCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGA 478
consensus_11000#2 ---------------------------AATGGTCCAAAGATCAATCA----GATGTTCT- 28
consensus_11000#3 ---------------------------------------------CA----GATGTTCT- 10
consensus_11000#0 ATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCA----GATGTTCT- 507
consensus_11000#1 TAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGG 538
* * *****
consensus_11000#2 TCAAATAC--ATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATC 86
consensus_11000#3 TCAAATACCACTGAAGACCCATTGCCGACCCTGAATGAAGATGAAGAAGCTGTCGGTATC 70
consensus_11000#0 TCAAATAC--ATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATC 565
consensus_11000#1 TGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGC 598
* * *** * * ** ** ** * * * ** ** *
consensus_11000#2 ATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGAC 146
consensus_11000#3 ATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGAC 130
consensus_11000#0 ATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGAC 625
consensus_11000#1 TCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCT 658
* ** * ** * **** * **** **** ** **
consensus_11000#2 GT---ACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAA 203
consensus_11000#3 GT---ACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAA 187
consensus_11000#0 GT---ACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAA 682
consensus_11000#1 GCTGGACCATCTGCTTGGTAAAGGT-CATACAGCTCTTTTCCGTAGAGCTGAACTAAAAA 717
* ** ** ** * *** * ** * ***** * ***
consensus_11000#2 -ATCGGTGCCATACCTTTCTTTTGGCTGAGG---GGAAGTGCCGGGTGCAAATATGTGTT 259
consensus_11000#3 -ATCGGTGCCATACCTTTCTTTTGGCTGAGG---GGAAGTGCCGGGTGCAAATATGTGTT 243
consensus_11000#0 -ATCGGTGCCATACCTTTCTTTTGGCTGAGG---GGAAGTGCCGGGTGCAAATATGTGTT 738
consensus_11000#1 CACTCGTG----ACCCTGCATGGAAATGAGGCTGGGAAAGGTGGGGAGTTAACCCACGAT 773
* *** *** * * * ***** **** * *** * ** * *
consensus_11000#2 TATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTT--- 316
consensus_11000#3 TATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTT--- 300
consensus_11000#0 TATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTT--- 795
consensus_11000#1 GAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATG 833
* * ** ** * * ** * * * **** * * * ** * *
consensus_11000#2 -CATTTGAACAGCTGGTACGAA-TAGTAGTGCAGTAGTAGAGAGGGACAAAAGAAAAGAG 374
consensus_11000#3 -CATTTGAACAGCTGGTACGAA-TAGTAGTCCAGTAGTAGAGAGGGACAAAGGGTT-GTG 357
consensus_11000#0 -CATTTGAACAGCTGGTACGAA-TAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTT-GTG 852
consensus_11000#1 ACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATG 893
** * * * ** * * * * * ** **** *
consensus_11000#2 TGATTTTGCTTGGTCCTGGGACA--GTAGGATTGCG--TAGTTATGAAACTGTACTGGTT 430
consensus_11000#3 TGATTTTGCTTGGTCCTGGGACAC-GTAGGATTGCG--TAGTTATGAAACTGTACTGGTT 414
consensus_11000#0 TGATTTTGCTTGGTCCTGGGACA--GTAGGATTGCG--TAGTTATGAAACTGTACTGGTT 908
consensus_11000#1 CAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAAC 953
* * * * * ** ** * *** * ** * ****** *
consensus_11000#2 ATCCCGGGATT----TTGACGCGGTAAT-AGTGCCGCTCTGAGTCAATGGTG---CTCCT 482
consensus_11000#3 ATCCCGGGATT----TTGACGCGGTAAT-AGTGCCGCTCTGAGTCA-TGGTG---CTCCT 465
consensus_11000#0 ATCCCGGGATT----TTGACGCGGTAAT-AGTGCCGCTCTGAGTCAATGGTG---CTCCT 960
consensus_11000#1 ATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCT 1013
** ***** *** * * * * * * * ** ** ** ****
consensus_11000#2 TCGGAAAAAAAAAAAAAGAAAAACTCGAGAC----------------------------- 513
consensus_11000#3 TCGGAAGGCTTCGCTTTCTAAAAAAAAAA------------------------------- 494
consensus_11000#0 TCGGAAGGCTTCGCTTTCTTGTGATGTTGGCCTCACTCGAAGCGTCTGCACAGTAACAAT 1020
consensus_11000#1 ATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGAC 1073
*
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 AAAAAGCATGACAGCCTTATATATTTCTCGAAATCTGGGAAAAATCTCACTCATATGATG 1080
consensus_11000#1 ATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAAT 1133
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 GGAACGAGCGTCTTCAATGAGTGAGCCACATGCGAGAAATCGCTCCCGAGTCCCGGCTCC 1140
consensus_11000#1 GCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCA 1193
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 ATGAGCACTACTCGTCCGGTCAGAACAACATCAAATCGCTTATATACAAACCTGCCGAGA 1200
consensus_11000#1 ATTGATGATAAGCATGGTCAGAAGGTTGTGAAGAATCTTCCCTCCACTAAGAAGATGGAA 1253
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 TTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCGTCATC 1260
consensus_11000#1 GAGCTGCCCCAAC----------------------------------------------- 1266
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 GGCGCTGGGTCTGGTGGGATAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTA 1320
consensus_11000#1 ------------------------------------------------------------
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 CCTGCGCGAGCCGACGCCTCATCGGCGCTGGGTCTGGTGGGATTTAATACCCTTTGTTTT 1380
consensus_11000#1 ------------------------------------------------------------
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 CCTCTGAAAAGGAGGAAGAATGCCGTGATAATAGCGCGTAGCCGGCAGGAGATACAAATC 1440
consensus_11000#1 ------------------------------------------------------------
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 CAGAAGAGCATTCTTCGTCATCCTTCATCCTGGTTGTTGTCTGCCATTGTTGTGGTCTAA 1500
consensus_11000#1 ------------------------------------------------------------
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 GCGTATGATCAAATCATTCTAAATAGCTATCTTGTTTTAAATCAAGATGTGATATGTCAT 1560
consensus_11000#1 ------------------------------------------------------------
consensus_11000#2 ------------------------------------------------------------
consensus_11000#3 ------------------------------------------------------------
consensus_11000#0 TCTAAATACTTCTATCCATTCACAAGAGTAATACCTATTTCATATTTTAGTTTTTTAAAA 1620
consensus_11000#1 ------------------------------------------------------------
consensus_11000#2 ----------------------------------------------------------
consensus_11000#3 ----------------------------------------------------------
consensus_11000#0 CAAGTTGTTTTTATTTGTAGTCTTTTTACACCAAGATTCAAATGAAGAGGTAAATTAA 1678
consensus_11000#1 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||