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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11006#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1983 fasta sequence
[AGAGTTATTGCATACCTCCGCTTGACTAGATACAACCACAGCCATGTCCTCCGCCGGCCACGCCGTCGACCAGCAGCGCAAATCCACCACGATGAAGGCGCACTTCGTGCTG-GTCCCGATGATGGCGCAGGGACACATGATCCCCATGACCGGCATGGCCCGCCTGCTGGCCGAGCATGGCGCGCAGGTCAGCTTTGTCACCACTCCGGTGAACGCCGCCAGGATGGCAGGATTCGTCACCGCTGTGGAGGCGGCTGGCCTGGCAGTGCAGCTGGTGAAGCTCCCCTTCCCGGCCACCGAGTTTGGGTTGCC-GGACGGGTGCGAAAACCTGGATATGATCCAGTCCAGGGATCTCAGCCGAAACTTCATGGAGGCCTGCGGAGCGCTCCGGGAGCCGCTCACGGCGAGGCTCCGTCAGCTATGCCCACCTCCAAGCTGCATCATATCTGACATGGTGCAGTGGTGGACCGGTGAAATTGCAAGGGAGCTCGGTATCCCAAGGCTAACATTTGATGGCTTCTGTACCTTCGCCTCCCTTGCCAGGTATATCATTTTCCGCGACAAACTGTTGGACAATGTCGCAGATGAGGAGATCGTCACTTTCTCAGGGTTCCCTATGCTGCTTGAGTTGCCAAAGGCTAGATGCCCTGGAAGCTTGTGTGTTCCAGGTATGGAACAAATTCGTGATAAGATGTATGAGGAGGAGCTGCAAAGCGATGGCAATGTAATGAACAGCTTCCAGGAGCTGGAGACTCTGTACATCGAGTCCTTTGAACAGATAACAGGTAAGAAGGTCTGGACAATCGGCCCAATGTGCCTCTGTGACAGAGACAGCAACATGATGGCTGCTAGAGGAAACAAGGCATCAGTGGATGAGGCAAAGTGCTTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTCGCCAGCACCGCACCTCAGCAGCTTGTTGAGCTGGGACTGGGGCTTGAAGCTTCCAAGGAGCCTTTCATCTGGGTGATCAAAGCAGGAAATAAGTTTCCAGAAGTTGAGGAATGGCTTGCAGATGGGTTCGAGGAACGCGTTAAAGACAGAGGCATGATAATAAGGGGCTGGGCACCACAGGTGATGATCCTATGGCACCAGGCCATTGGAGGGTTCATGACACACTGTGGGTGGAACTCAACAATAGAGGGCATTTGCGCGGGCGTGCCCATGATCACATGGCCACATTTCGCAGAGCAGTTTTTGAATGAGAAATTTGTGGTGAATCTGCTGAAAATTGGGCTGGAGATTGGAGTGAAAGGAGTGGCACAATGGGGAAGTGAACATAAAGAAGTTAGGGTGACAAGGAATGCTGT-GGAGACAGCAGTGTCCACATTGATGAATGATGGAGAAGCTGCACAGGAGATGAGGATGAGAGCAAAAGACTTGGGTGTAAAGGCAAGGAGGGCTTTGGAAGAGGGAGGTTCTTCCTATGATAACATAAGCCTATTGATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACAGATGGGAATAAGCATTTTTTTTAATCATGATGAGCATGAAGTGGAGGACCTATCATACTTATATCTTCATAAAGTATGGAAGATGTCCACATTTGGTTATTCAACTATGGATTTGGCCTGAATTTCATCCCTCTAACTATAAAGGATTGTGTTTTACAAATGACCAGTATGTTGTGTGGTATGATTCTATGGTTTAAAATAAACCTGGTCTAAATTGCATCAGTTGCTCAGTTTCTCAGCAGAGTTGATACNTTTTAGAGAAGGAGTAAAAATTAAATAAAATAGCGTTTGTGCAACNCCCTAGGCCAAAATGCTCTCAAAGTCTAATCTCCAAGTAATTTGGGTGTACGACTGGTACNTTCTTACGAGCATAGAGGACTGGTGTAAATTTATGAAAACAATACTTTGCCAATTATATACTTCTTTAACTTTTCTGAAAAAA]
[+] EMBL C28641 [AGAGTTATTGCATACCTCCGCTTGACTAGATACAACCACAGCCATGTCCTCCGCCGGCCACGCCGTCGACCAGCAGCGCAAATCCACCACGATGAAGGCGCACTTCGT NTGNGTCCCGATGATGGCGCAGGGACACATGATCCCCATGACCGGCATGGCCCGCCTGCTGGCCGAGCATGGCGCGCAGGTCAGCTTTGTCACCACTCCGGTGAACGCCGCCAGGATGGCAGGATTCGTCACCGCTGTGGAGGCGGCTGGCCTGGCAGTGCAGCTGGTGAAGCTCCCCTTCCCGGCCACCGAGTTTGGGTTGCCGGGACGGGTGCGAAAACCTGGATATGATCCAGTCCAGGGATCTCAGCCGAAACTTCATGGAGG ]
[+] EMBL AK102335 [ GCTTGACTAGATACAACCACAGCCATGTCCTCCGCCGGCCACGCCGTCGACCAGCAGCGCAAATCCACCACGATGAAGGCGCACTTCGTGCTG GTCCCGATGATGGCGCAGGGACACATGATCCCCATGACCGGCATGGCCCGCCTGCTGGCCGAGCATGGCGCGCAGGTCAGCTTTGTCACCACTCCGGTGAACGCCGCCAGGATGGCAGGATTCGTCACCGCTGTGGAGGCGGCTGGCCTGGCAGTGCAGCTGGTGAAGCTCCCCTTCCCGGCCACCGAGTTTGGGTTGCC GGACGGGTGCGAAAACCTGGATATGATCCAGTCCAGGGATCTCAGCCGAAACTTCATGGAGGCCTGCGGAGCGCTCCGGGAGCCGCTCACGGCGAGGCTCCGTCAGCTATGCCCACCTCCAAGCTGCATCATATCTGACATGGTGCAGTGGTGGACCGGTGAAATTGCAAGGGAGCTCGGTATCCCAAGGCTAACATTTGATGGCTTCTGTACCTTCGCCTCCCTTGCCAGGTATATCATTTTCCGCGACAAACTGTTGGACAATGTCGCAGATGAGGAGATCGTCACTTTCTCAGGGTTCCCTATGCTGCTTGAGTTGCCAAAGGCTAGATGCCCTGGAAGCTTGTGTGTTCCAGGTATGGAACAAATTCGTGATAAGATGTATGAGGAGGAGCTGCAAAGCGATGGCAATGTAATGAACAGCTTCCAGGAGCTGGAGACTCTGTACATCGAGTCCTTTGAACAGATAACAGGTAAGAAGGTCTGGACAATCGGCCCAATGTGCCTCTGTGACAGAGACAGCAACATGATGGCTGCTAGAGGAAACAAGGCATCAGTGGATGAGGCAAAGTGCTTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTCGCCAGCACCGCACCTCAGCAGCTTGTTGAGCTGGGACTGGGGCTTGAAGCTTCCAAGGAGCCTTTCATCTGGGTGATCAAAGCAGGAAATAAGTTTCCAGAAGTTGAGGAATGGCTTGCAGATGGGTTCGAGGAACGCGTTAAAGACAGAGGCATGATAATAAGGGGCTGGGCACCACAGGTGATGATCCTATGGCACCAGGCCATTGGAGGGTTCATGACACACTGTGGGTGGAACTCAACAATAGAGGGCATTTGCGCGGGCGTGCCCATGATCACATGGCCACATTTCGCAGAGCAGTTTTTGAATGAGAAATTTGTGGTGAATCTGCTGAAAATTGGGCTGGAGATTGGAGTGAAAGGAGTGGCACAATGGGGAAGTGAACATAAAGAAGTTAGGGTGACAAGGAATGCTGT GGAGACAGCAGTGTCCACATTGATGAATGATGGAGAAGCTGCACAGGAGATGAGGATGAGAGCAAAAGACTTGGGTGTAAAGGCAAGGAGGGCTTTGGAAGAGGGAGGTTCTTCCTATGATAACATAAGCCTATTGATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACAGATGGGAATAAGCATTTTTTTTAATCATGATGAGCATGAAGTGGAGGACCTATCATACTTATATCTTCATAAAGTATGGAAGATGTCCACATTTGGTTATTCAACTATGGATTTGGCCTGAATTTCATCCCTCTAACTATAAAGG ]
[+] EMBL AK064351 [ TCCTCCGCCGGCCACGCCGTCGACCAGCAGCGCAAATCCACCACGATGAAGGCGCACTTCGTGCTG GTCCCGATGATGGCGCAGGGACACATGATCCCCATGACCGGCATGGCCCGCCTGCTGGCCGAGCATGGCGCGCAGGTCAGCTTTGTCACCACTCCGGTGAACGCCGCCAGGATGGCAGGATTCGTCACCGCTGTGGAGGCGGCTGGCCTGGCAGTGCAGCTGGTGAAGCTCCCCTTCCCGGCCACCGAGTTTGGGTTGCC GGACGGGTGCGAAAACCTGGATATGATCCAGTCCAGGGATCTCAGCCGAAACTTCATGGAGGCCTGCGGAGCGCTCCGGGAGCCGCTCACGGCGAGGCTCCGTCAGCTATGCCCACCTCCAAGCTGCATCATATCTGACATGGTGCAGTGGTGGACCGGTGAAATTGCAAGGGAGCTCGGTATCCCAAGGCTAACATTTGATGGCTTCTGTACCTTCGCCTCCCTTGCCAGGTATATCATTTTCCGCGACAAACTGTTGGACAATGTCGCAGATGAGGAGATCGTCACTTTCTCAGGGTTCCCTATGCTGCTTGAGTTGCCAAAGGCTAGATGCCCTGGAAGCTTGTGTGTTCCAGGTATGGAACAAATTCGTGATAAGATGTATGAGGAGGAGCTGCAAAGCGATGGCAATGTAATGAACAGCTTCCAGGAGCTGGAGACTCTGTACATCGAGTCCTTTGAACAGATAACAGGTAAGAAGGTCTGGACAATCGGCCCAATGTGCCTCTGTGACAGAGACAGCAACATGATGGCTGCTAGAGGAAACAAGGCATCAGTGGATGAGGCAAAGTGCTTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTCGCCAGCACCGCACCTCAGCAGCTTGTTGAGCTGGGACTGGGGCTTGAAGCTTCCAAGGAGCCTTTCATCTGGGTGATCAAAGCAGGAAATAAGTTTCCAGAAGTTGAGGAATGGCTTGCAGATGGGTTCGAGGAACGCGTTAAAGACAGAGGCATGATAATAAGGGGCTGGGCACCACAGGTGATGATCCTATGGCACCAGGCCATTGGAGGGTTCATGACACACTGTGGGTGGAACTCAACAATAGAGGGCATTTGCGCGGGCGTGCCCATGATCACATGGCCACATTTCGCAGAGCAGTTTTTGAATGAGAAATTTGTGGTGAATCTGCTGAAAATTGGGCTGGAGATTGGAGTGAAAGGAGTGGCACAATGGGGAAGTGAACATAAAGAAGTTAGGGTGACAAGGAATGCTGT GGAGACAGCAGTGTCCACATTGATGAATGATGGAGAAGCTGCACAGGAGATGAGGATGAGAGCAAAAGACTTGGGTGTAAAGGCAAGGAGGGCTTTGGAAGAGGGAGGTTCTTCCTATGATAACATAAGCCTATTGATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACAGATGGGAATAAGCATTTTTTTTAATCATGATGAGCATGAAGTGGAGGACCTATCATACTTATATCTTCATAAAGTATGGAAGATGTCCACATTTGGTTATTCAACTATGGATTTGGCCTGAATTTCATCCCTCTAACTATAAAGGATTGTGTTTTACAAATGACCAGTATGTTGTGTGGTATGATTCTATGGTTTAAAATAAACCTGGTCT ]
[+] EMBL C73149 [ cnanAAGCAGGAAATAAGTTTCCAGAAGTTGAGGAATGGCTTGCAGATGGGTTCGAGGAACGCGTTAAAGACAGAGGCATGATAATAAGGGGCTGGGCACCACAGGTGATGATCCTATGGCACCAGGCCATTGGAGGGTTCATGACACACTGTGGGTGGAACTCAACAATAGAGGGCATTTGCGCGGGCGTGCCCATGATCACATGGCCACATTTCGCAGAGCAGTTTTTGAATGAGAAATTTGTGGTGAATCTGCTGAAAATTGGGCTGGAGATTGGAGTGAAAGGAGTGGCACAATGGGGAAGTGAACATAAAGAAGTTAGGGTGACAAGGAATGCTGTGGGAGACAGCAGTGTCCACATTGATGAATGATGGAGAAGCTGCACAGGAGATGAGGATGAGAGCAAAAGACTTGGGTGTAAAGGCAAGGAGGGCTTTGGAAGA ]
[+] EMBL AU222588 [ TGTGGTGAATCTGCTGAAAATTGGGCTGGAGATTGGAGTGAAAGGAGTGGCNCAATGGGGAAGTGAACATAAAGAAGTTAGGGTGACAAGGAATGCTGT GGAGACAGCAGTGTCCACATTGATGAATGATGGAGAAGCTGCACAGGAGATGAGGATGAGAGCAAAAGACTTGGGTGTAAAGGCAAGGAGGGCTTTGGAAGAGGGAGGTTCTTCCTATGATAACATAAGCCTATTGATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACAGATGGGAATAAGCATTTTTTTTAATCATGATGAGCATGAAGTGGAGGACCTATCATACTTATATCTTCATAAAGTATGGAAGATGTCCNCATTTGGTTATTCAACTATGGATTTGGCCTGAATTTCATCCCTCTAACTATAAAGGATTGTGTTTTACAAAaa ]
[+] EMBL AU222564 [ TATGGAAGATGTCCACATTTGGTTATTCAACTATGGATTTGGCCTGAATTTCATCCCTCTAACTATAAAGGATTGTGTTTTACAAATGACCAGTATGTTGTGTGGTATGATTCTATGGTTTAAAATAAACCTGGTNTAAATTGCATCAGTTGCTCAGTTTCTCAGCAGAGTTGATACNTTTTAGAGAAGGAGTAAAAATTAAATAAAATAGCGTTTGTGCAACNCCCTAGGCCAAAATGCTCTCAAAGTCTAATCTCCAAGTAATTTGGGTGTACGACTGGTACNTTCTTACGAGCATAGAGGACTGGTGTAAATTTATGAAAACAATACTTTGCCAATTATATACTTCTTTAACTTTTCTGAAAAAA]
consensusID : consensus_11006#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1668 fasta sequence
[ACTCAAACGCCATAAAACAACTTCGCCACAATTCACTAGCAACAAACCACAGCCATGGACGACGACACCGCCGGCCACGCCTCCGGCGGCTACACGACGACGGCGGCGGCGCACTTCGTGCTGGTCCCGATGATGGCGCAGGGCCACGCCATCCCCATGACCGACATGGCGCGCCTGCTGGCCGAGCACGGCGCGGCGCGGGTCAGCCTCGTCGTCACGCCGGTCAACGCCGCCAGGATGGCCGGGTTCGCCGCCGGCGTGGAGGAGGCCGGCCTGCCGGTGCAGCTGGTGGAGCTCCCCTTCCCGGCCGCCGAGTTCGGCCTGCCGGACGGCTGCGAGAACGTCGACATGCTCCCGTCCAAAGACCTCTTCAGCAACTTCCTCTTGGCCTGCGGCGCGCTCCGGGAGCCGTTCGCGGCGAGGCTCCGGCAGCAACGGCCGCCGGCGAGCTGCATCATCTCCGACATGATACACTCGTGGGCCGGTGACATCGCCAGGGAGCTCGGCGTCCCATGGCTCACGTTCAACGGCTCCTGCACCTTCTCCTCCTTTGCCAGGGACATCATTTATCGCAAAAATCTATTGGAGAACCTCACGGATGATGAGATCGTCAAAGTCTCAGGGTTCCCTACGCCGCTAGAGTTGCCAAAAGCTAGATGCCCTGGAACACTGTGCGTTCCAGGTCTGAAGCAAATAAGTGACAAGATTTACGAGGCTGAGACGCGAAGCGATGGCAGGATCATGAATAGCTTCCAGGAGATGGAATCTCTGTACATCGAGTCGTTTGAGCGAACCATAGGTAAGAAGATCTGGACGATCGGCCCAATGTGCCTTTGTCACAGAGACAGCAACGCCATGGCTGCTAGAGGAAACAAGGCGTCAATGGATGATGCGAAATGTTTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTCTCCAGCACCGACCCTCAGCAGCTTGTTGAGCTGGGGCTGGGACTTGAAGCTTCCAAGAAACCATTCATCTGGGTGATCAAAGCAGGAAAAAAGTTTCCAGAAGTCGAGGAATGGCTTGCAGATGGGTTCGAGGAGCGCGTCAAAGACAGAGGCATGATCATAAGGGCCTGGGCGCCACAGATGATGATCCTGTGGCACCAGGCCATTGGAGGGTTCATGACGCACTGCGGGTGGAACTCGACACTAGAGGGCATCTCCGTGGGTGTGCCGATGATCACATGGCCACACTGTTCAGAGCAGTTTGTGAATGAGAAATTGGTGGTGGATCACCTGAAAATTGGGGTGGAGGTTGGAGTGAAAGGAGTGACACAGTGGGGAACTGAACAAAAAGAGGTTAAGGTGACAAGGACTGCTGTGGAGACAGCGGTATCCATGTTGATGGATGAAGGGGAAGTTGCACAGGAGATTAGGATGAGAGCAAAAGATTTTGGCATGAAGGCAAGAAGGGCTTTGGAAGAGGGAGGTTCTTCCTATAACAACATAAAACTATTAATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACATATGGAAATAAGCTTTATTTTTTCTTAATTGTAAATCTGTAAGCAAGAACTGGAGGATCCTATTGTGCTTACCCTGATTTTCATCCCTCAAACTATAAAGAACTGTACTCTCC]
[+] EMBL AK103303 [ACTCAAACGCCATAAAACAACTTCGCCACAATTCACTAGCAACAAACCACAGCCATGGACGACGACACCGCCGGCCACGCCTCCGGCGGCTACACGACGACGGCGGCGGCGCACTTCGTGCTGGTCCCGATGATGGCGCAGGGCCACGCCATCCCCATGACCGACATGGCGCGCCTGCTGGCCGAGCACGGCGCGGCGCGGGTCAGCCTCGTCGTCACGCCGGTCAACGCCGCCAGGATGGCCGGGTTCGCCGCCGGCGTGGAGGAGGCCGGCCTGCCGGTGCAGCTGGTGGAGCTCCCCTTCCCGGCCGCCGAGTTCGGCCTGCCGGACGGCTGCGAGAACGTCGACATGCTCCCGTCCAAAGACCTCTTCAGCAACTTCCTCTTGGCCTGCGGCGCGCTCCGGGAGCCGTTCGCGGCGAGGCTCCGGCAGCAACGGCCGCCGGCGAGCTGCATCATCTCCGACATGATACACTCGTGGGCCGGTGACATCGCCAGGGAGCTCGGCGTCCCATGGCTCACGTTCAACGGCTCCTGCACCTTCTCCTCCTTTGCCAGGGACATCATTTATCGCAAAAATCTATTGGAGAACCTCACGGATGATGAGATCGTCAAAGTCTCAGGGTTCCCTACGCCGCTAGAGTTGCCAAAAGCTAGATGCCCTGGAACACTGTGCGTTCCAGGTCTGAAGCAAATAAGTGACAAGATTTACGAGGCTGAGACGCGAAGCGATGGCAGGATCATGAATAGCTTCCAGGAGATGGAATCTCTGTACATCGAGTCGTTTGAGCGAACCATAGGTAAGAAGATCTGGACGATCGGCCCAATGTGCCTTTGTCACAGAGACAGCAACGCCATGGCTGCTAGAGGAAACAAGGCGTCAATGGATGATGCGAAATGTTTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTCTCCAGCACCGACCCTCAGCAGCTTGTTGAGCTGGGGCTGGGACTTGAAGCTTCCAAGAAACCATTCATCTGGGTGATCAAAGCAGGAAAAAAGTTTCCAGAAGTCGAGGAATGGCTTGCAGATGGGTTCGAGGAGCGCGTCAAAGACAGAGGCATGATCATAAGGGCCTGGGCGCCACAGATGATGATCCTGTGGCACCAGGCCATTGGAGGGTTCATGACGCACTGCGGGTGGAACTCGACACTAGAGGGCATCTCCGTGGGTGTGCCGATGATCACATGGCCACACTGTTCAGAGCAGTTTGTGAATGAGAAATTGGTGGTGGATCACCTGAAAATTGGGGTGGAGGTTGGAGTGAAAGGAGTGACACAGTGGGGAACTGAACAAAAAGAGGTTAAGGTGACAAGGACTGCTGTGGAGACAGCGGTATCCATGTTGATGGATGAAGGGGAAGTTGCACAGGAGATTAGGATGAGAGCAAAAGATTTTGGCATGAAGGCAAGAAGGGCTTTGGAAGAGGGAGGTTCTTCCTATAACAACATAAAACTATTAATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACATATGGAAATAAGCTTTATTTTTTCTTAATTGTAAATCTGTAAGCAAGAACTGGAGGATCCTATTGTGCTTACCCTGATTTTCATCCCTCAAACTATAAAGAACTGTACTCTCC]
consensusID : consensus_11006#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 927 fasta sequence
[GCGCCTGCTGGCCGAGCACGGCGCGGCGCGGGTCATCCTCGTCGTCACGCCGGTCAACGCCGCCAGGATGGCCGGGTTCGCCGCCGGCGTGGAGGAGGCCGGCCTGCCGGTGCAGCTGGTGGAGCTCCCCTTCCCGGCCGCCGAGTTCGGCCTGCCGGACGGCTGCGAGAACGTCGACATGCTCCCGTCCAAAGACCTCTTCAGCAACTTCCTCTTGGCCTGCGGCGCGCTCCGGGAGCCGTTCGCGGCGAGGCTCCGGCAGCAACGGCCGCCGGCGAGCTGCATCATCTCCGACATGATACACTCGTGGGCCGGTGACATCGCCAGGGAGCTCGGCGTNCCATGGCTCACGTTCAACGGCTCCTGCACCTTCTCCTCCTTTGCCAGGTAAAAATCGTAGCAAAAGCCACTGGCATATNNTCTCTGATATGAATAANGGGTATCCGTCATTTNTACATGTCACTTAAAAAGTCATCAAAATATTTTAAAAAAAGTTTGGTNGGATAGATCATATGTGAANTGTACTTCACGACATGCAATTCAATTCACCTATACAGTTGAANNTAAATATNATTTGCTATGATGGAACGCATCTACGGCCATTGGTATTTNGTTCAATGGTAAGTGAGATTACTCGTGTNGCAAAGAATTTATTATTGACTTCGGAAANTTTTACCTTAAACCAAGGAAACAGGGTATTCTCGGGGAAAATTTTCCATAACACAAATACTTCCCTCCGCACAATTATNAAATCTTTTTGGGAAAGAGAAGGATTTTTGGTGTAACACACCGGGGCGGGGGGGTANAAGGCCATTTTTTTATTCTCACCCACCCTCCTCTTTAAAAANNTGGNNAATAAAANCGANNNCNCNNCCTTTTTTTTTTNTATATATATTTTTNNTATTTATTTTTAATGCAACAACAGAG]
[+] EMBL AW155158 [GCGCCTGCTGGCCGAGCACGGCGCGGCGCGGGTCATCCTCGTCGTCACGCCGGTCAACGCCGCCAGGATGGCCGGGTTCGCCGCCGGCGTGGAGGAGGCCGGCCTGCCGGTGCAGCTGGTGGAGCTCCCCTTCCCGGCCGCCGAGTTCGGCCTGCCGGACGGCTGCGAGAACGTCGACATGCTCCCGTCCAAAGACCTCTTCAGCAACTTCCTCTTGGCCTGCGGCGCGCTCCGGGAGCCGTTCGCGGCGAGGCTCCGGCAGCAACGGCCGCCGGCGAGCTGCATCATCTCCGACATGATACACTCGTGGGCCGGTGACATCGCCAGGGAGCTCGGCGTNCCATGGCTCACGTTCAACGGCTCCTGCACCTTCTCCTCCTTTGCCAGGTAAAAATCGTAGCAAAAGCCACTGGCATATNNTCTCTGATATGAATAANGGGTATCCGTCATTTNTACATGTCACTTAAAAAGTCATCAAAATATTTTAAAAAAAGTTTGGTNGGATAGATCATATGTGAANTGTACTTCACGACATGCAATTCAATTCACCTATACAGTTGAANNTAAATATNATTTGCTATGATGGAACGCATCTACGGCCATTGGTATTTNGTTCAATGGTAAGTGAGATTACTCGTGTNGCAAAGAATTTATTATTGACTTCGGAAANTTTTACCTTAAACCAAGGAAACAGGGTATTCTCGGGGAAAATTTTCCATAACACAAATACTTCCCTCCGCACAATTATNAAATCTTTTTGGGAAAGAGAAGGATTTTTGGTGTAACACACCGGGGCGGGGGGGTANAAGGCCATTTTTTTATTCTCACCCACCCTCCTCTTTAAAAANNTGGNNAATAAAANCGANNNCNCNNCCTTTTTTTTTTNTATATATATTTTTNNTATTTATTTTTAATGCAACAACAGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11006#0 -----AGAGTTATTGCATACCTCCGC-----TTGACTAGATACAA-CCACAGCCATGTCC 49
consensus_11006#1 ACTCAAACGCCATAAAACAACTTCGCCACAATTCACTAGCAACAAACCACAGCCATGGAC 60
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 TCCGCCGGCCACGCCGTCGACCAGCAGCGCAAATCCACCACGATGAAGGCGCACTTCGTG 109
consensus_11006#1 GACGACACCGCCGGCCACGCCTCCGGCGGCTACACGACGACGGCGGCGGCGCACTTCGTG 120
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 CTGGTCCCGATGATGGCGCAGGGACACATGATCCCCATGACCGGCATGGCCCGCCTGCTG 169
consensus_11006#1 CTGGTCCCGATGATGGCGCAGGGCCACGCCATCCCCATGACCGACATGGCGCGCCTGCTG 180
consensus_11006#2 --------------------------------------------------GCGCCTGCTG 10
*********
consensus_11006#0 GCCGAGCATGGCGCG---CAGGTCAGCTTTGTCACCACTCCGGTGAACGCCGCCAGGATG 226
consensus_11006#1 GCCGAGCACGGCGCGGCGCGGGTCAGCCTCGTCGTCACGCCGGTCAACGCCGCCAGGATG 240
consensus_11006#2 GCCGAGCACGGCGCGGCGCGGGTCATCCTCGTCGTCACGCCGGTCAACGCCGCCAGGATG 70
******** ****** * ***** * * *** *** ***** ***************
consensus_11006#0 GCAGGATTCGTCACCGCTGTGGAGGCGGCTGGCCTGGCAGTGCAGCTGGTGAAGCTCCCC 286
consensus_11006#1 GCCGGGTTCGCCGCCGGCGTGGAGGAGGCCGGCCTGCCGGTGCAGCTGGTGGAGCTCCCC 300
consensus_11006#2 GCCGGGTTCGCCGCCGGCGTGGAGGAGGCCGGCCTGCCGGTGCAGCTGGTGGAGCTCCCC 130
** ** **** * *** ******* *** ****** * ************ ********
consensus_11006#0 TTCCCGGCCACCGAGTTTGGGTTGCCGGACGGGTGCGAAAACCTGGATATGATCCAGTCC 346
consensus_11006#1 TTCCCGGCCGCCGAGTTCGGCCTGCCGGACGGCTGCGAGAACGTCGACATGCTCCCGTCC 360
consensus_11006#2 TTCCCGGCCGCCGAGTTCGGCCTGCCGGACGGCTGCGAGAACGTCGACATGCTCCCGTCC 190
********* ******* ** ********** ***** *** * ** *** *** ****
consensus_11006#0 AGGGATCTCAGCCGAAACTTCATGGAGGCCTGCGGAGCGCTCCGGGAGCCGCTCACGGCG 406
consensus_11006#1 AAAGACCTCTTCAGCAACTTCCTCTTGGCCTGCGGCGCGCTCCGGGAGCCGTTCGCGGCG 420
consensus_11006#2 AAAGACCTCTTCAGCAACTTCCTCTTGGCCTGCGGCGCGCTCCGGGAGCCGTTCGCGGCG 250
* ** *** * * ****** * ********* *************** ** *****
consensus_11006#0 AGGCTCCGTCAGCTATGCCCACCTCCAAGCTGCATCATATCTGACATGGTGCAGTGGTGG 466
consensus_11006#1 AGGCTCCGGCAGCAACGGCCGCCGGCGAGCTGCATCATCTCCGACATGATACACTCGTGG 480
consensus_11006#2 AGGCTCCGGCAGCAACGGCCGCCGGCGAGCTGCATCATCTCCGACATGATACACTCGTGG 310
******** **** * * ** ** * *********** ** ****** * ** * ****
consensus_11006#0 ACCGGTGAAATTGCAAGGGAGCTCGGTATCCCAAGGCTAACATTTGATGGCTTCTGTACC 526
consensus_11006#1 GCCGGTGACATCGCCAGGGAGCTCGGCGTCCCATGGCTCACGTTCAACGGCTCCTGCACC 540
consensus_11006#2 GCCGGTGACATCGCCAGGGAGCTCGGCGTNCCATGGCTCACGTTCAACGGCTCCTGCACC 370
******* ** ** *********** * *** **** ** ** * **** *** ***
consensus_11006#0 TTCGCCTCCCTTGCCAGGTATATCATTTTCCGCGACAAACTGTTGGACAATGTCGCAGAT 586
consensus_11006#1 TTCTCCTCCTTTGCCAGGGACATCATTTATCGCAAAAATCTATTGGAGAACCTCACGGAT 600
consensus_11006#2 TTCTCCTCCTTTGCCAGGTAAA--AATCGTAGCAAAAGCCACTGGCATATNNTCTCTGAT 428
*** ***** ******** * * * * ** * * * * * * * ** * ***
consensus_11006#0 GAGGAGATCGTCACTTTCTCAGGGTTCCCTATGCTGCTTGAGTTGCCAAAGGCTAGATGC 646
consensus_11006#1 GATGAGATCGTCAAAGTCTCAGGGTTCCCTACGCCGCTAGAGTTGCCAAAAGCTAGATGC 660
consensus_11006#2 ATGAATAANGGGTATCCGTCA--TTTNTACATGTCACTTAAAAAGTCATCAAAATATTTT 486
* * * *** ** * * ** * * ** *
consensus_11006#0 CCTGGAAGCTTGTGTGTTCCAGGTATGGAACAAATTCGTGATAAGATGTATGAGGAGGAG 706
consensus_11006#1 CCTGGAACACTGTGCGTTCCAGGTCTGAAGCAAATAAGTGACAAGATTTACGAGGCTGAG 720
consensus_11006#2 AAAAAAAGTTTGGTNGGATAGATCATATGTGAANTGTACTTCACGACATGCAATTCAATT 546
** ** * * ** * * ** * *
consensus_11006#0 CTGCAAAGCGATGGCAATGTAATGAACAGCTTCCAGGAGCTGGAGACTCTGTACATCGAG 766
consensus_11006#1 ACGCGAAGCGATGGCAGGATCATGAATAGCTTCCAGGAGATGGAATCTCTGTACATCGAG 780
consensus_11006#2 CACCTATACAGTTG-AANNTAAATATNATTTGCTATGA--TGGAACGCATCTACGGCCAT 603
* * * * * * * * * * * * * ** **** * *** * *
consensus_11006#0 TCCTTTGAACAGATAACAGGTAAGAAGGTCTGGACAATCGGCCCAATGTGCCTCTGTGAC 826
consensus_11006#1 TCGTTTGAGCGAACCATAGGTAAGAAGATCTGGACGATCGGCCCAATGTGCCTTTGTCAC 840
consensus_11006#2 TGGTAT--TTNGTTCAATGGTAAGTGAGATTACTCGTGTNGCAAAGAATTTATTATTGAC 661
* * * * ****** * * ** * * * * **
consensus_11006#0 AGAGACAGCAACATGATGGCTGCTAGAGGAAACAAGGCATCAGTGGATGAGGCAAAGTGC 886
consensus_11006#1 AGAGACAGCAACGCCATGGCTGCTAGAGGAAACAAGGCGTCAATGGATGATGCGAAATGT 900
consensus_11006#2 TTCGGAA--ANTTTTACCTTAAACCAAGGAAACAGGGTATTCTCGG----GGAAAATTTT 715
* * * * ******** ** * ** * ** *
consensus_11006#0 TTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTC 946
consensus_11006#1 TTGCAATGGCTTGATTCAAAGAAGCCTGGTTCAGTGATCTTTGTCAGCTTTGGCAGCCTC 960
consensus_11006#2 CCATAACACAAATACTTCCCTCCGCACAATTATNAAATCTTTTTGGGAAAGAGAAGGATT 775
** * * ** ** ****** * * * ** *
consensus_11006#0 GCCAGCACCGCACCTCAGCAGCTTGTTGAGCTGGGACTGGGGCTTGAAGCTTCCAAGGAG 1006
consensus_11006#1 TCCAGCACCGACCCTCAGCAGCTTGTTGAGCTGGGGCTGGGACTTGAAGCTTCCAAGAAA 1020
consensus_11006#2 TTTGGTGTAACACACCGG-GGCGGGGGGGTANAAGGCCATTTTTTTA--TTCTCACCCAC 832
* * * * ** * * * * ** * * ** *
consensus_11006#0 CCTTTCATCTGGGTGATCAAAGCAGGAAATAAGTTTCCAGAAGTTGAGGAATGGCTTGCA 1066
consensus_11006#1 CCATTCATCTGGGTGATCAAAGCAGGAAAAAAGTTTCCAGAAGTCGAGGAATGGCTTGCA 1080
consensus_11006#2 CCTCCTCTTTAAAAANNTGGNNAATAAAANCGANNNCNCNNCCTTTTTT--TTTTNTATA 890
** * * * *** * * * * *
consensus_11006#0 GATGGGTTCGAGGAACGCGTTAAAGACAGAGGCATGATAATAAGGGGCTGGGCACCACAG 1126
consensus_11006#1 GATGGGTTCGAGGAGCGCGTCAAAGACAGAGGCATGATCATAAGGGCCTGGGCGCCACAG 1140
consensus_11006#2 TATATTTTTNNTATTTATTTTTAATGCAACAACAGAG----------------------- 927
** ** * ** ** **
consensus_11006#0 GTGATGATCCTATGGCACCAGGCCATTGGAGGGTTCATGACACACTGTGGGTGGAACTCA 1186
consensus_11006#1 ATGATGATCCTGTGGCACCAGGCCATTGGAGGGTTCATGACGCACTGCGGGTGGAACTCG 1200
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 ACAATAGAGGGCATTTGCGCGGGCGTGCCCATGATCACATGGCCACATTTCGCAGAGCAG 1246
consensus_11006#1 ACACTAGAGGGCATCTCCGTGGGTGTGCCGATGATCACATGGCCACACTGTTCAGAGCAG 1260
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 TTTTTGAATGAGAAATTTGTGGTGAATCTGCTGAAAATTGGGCTGGAGATTGGAGTGAAA 1306
consensus_11006#1 TTTGTGAATGAGAAATTGGTGGTGGATCACCTGAAAATTGGGGTGGAGGTTGGAGTGAAA 1320
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 GGAGTGGCACAATGGGGAAGTGAACATAAAGAAGTTAGGGTGACAAGGAATGCTGTGGAG 1366
consensus_11006#1 GGAGTGACACAGTGGGGAACTGAACAAAAAGAGGTTAAGGTGACAAGGACTGCTGTGGAG 1380
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 ACAGCAGTGTCCACATTGATGAATGATGGAGAAGCTGCACAGGAGATGAGGATGAGAGCA 1426
consensus_11006#1 ACAGCGGTATCCATGTTGATGGATGAAGGGGAAGTTGCACAGGAGATTAGGATGAGAGCA 1440
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 AAAGACTTGGGTGTAAAGGCAAGGAGGGCTTTGGAAGAGGGAGGTTCTTCCTATGATAAC 1486
consensus_11006#1 AAAGATTTTGGCATGAAGGCAAGAAGGGCTTTGGAAGAGGGAGGTTCTTCCTATAACAAC 1500
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 ATAAGCCTATTGATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACAGATGG 1546
consensus_11006#1 ATAAAACTATTAATTCAAGAAATGGGAAACAAGCAAAATGCATCTGGTTGATACATATGG 1560
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 GAATAAGCATTTTTTTTAATCATGATGAGCATGAAGTGGAGGACCTATCATACTTATATC 1606
consensus_11006#1 AAATAAGCTTTATTTTT------------------------------TCTTAATTGTAAA 1590
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 TTCATAAAGTATGGAAGATGTCCACATTTGGTTATTCAACTATGGATTTGGCCTGAATTT 1666
consensus_11006#1 TCTGTAA-----GCAAGA-------ACTGGAGGATCCTATTGTG--CTTACCCTGATTTT 1636
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 CATCCCTCTAACTATAAAGGATTGTGTTTTACAAATGACCAGTATGTTGTGTGGTATGAT 1726
consensus_11006#1 CATCCCTCAAACTATAAAGAACTGTACTCTCC---------------------------- 1668
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 TCTATGGTTTAAAATAAACCTGGTCTAAATTGCATCAGTTGCTCAGTTTCTCAGCAGAGT 1786
consensus_11006#1 ------------------------------------------------------------
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 TGATACNTTTTAGAGAAGGAGTAAAAATTAAATAAAATAGCGTTTGTGCAACNCCCTAGG 1846
consensus_11006#1 ------------------------------------------------------------
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 CCAAAATGCTCTCAAAGTCTAATCTCCAAGTAATTTGGGTGTACGACTGGTACNTTCTTA 1906
consensus_11006#1 ------------------------------------------------------------
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 CGAGCATAGAGGACTGGTGTAAATTTATGAAAACAATACTTTGCCAATTATATACTTCTT 1966
consensus_11006#1 ------------------------------------------------------------
consensus_11006#2 ------------------------------------------------------------
consensus_11006#0 TAACTTTTCTGAAAAAA 1983
consensus_11006#1 -----------------
consensus_11006#2 -----------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||