cluster # 11019

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Oryza sativa
cluster # 11019 cluster # 11019 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11019#0 length = 1506 sequences # 8
consensusID : consensus_11019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1506
fasta sequence
                              [AATCTCACCCATCGCCGACGACCCACGCACGCAGTCCACCAACGCGCCGCCGCCGCCGAATCCGCTTCGCTCCCTCCGCCGCGCCGCGCGCCACCTCCGTCGACGCTGGCCCGACGCGCGCGGTTCGTGAAGGAGGAGGAGGAGGAGGAGCTTCTGCCGGGTCGGACCGTCGGTTTCTCTCGTTGACCTGCAGGAGGGTGCGCAGGGTTTCTTCTTCGACATGTCTTGGGCTGCAATCGAGAATGATCCTGGCATTTTTACTGAACTGTTGCAACAGATGCAACTGAAGGGTCTTCAAGTTGATGAACTCTATTCACTCGATCTGGATGCCCTCAATGATCTTCAGCCAGTTTATGGGCTCATTGTGCTGTACAAATGGCAACCTCCAGAAAAAGATGAGCGTCCTATCAAGGACCCAATCCCAAACCTTTTCTTTGCTAAGCAGATAATTAACAATGCATGTGCCACCCAAGCTATCGTTTCTGTTCTATTAAACTCTCCGGGTATCACCCTTAGTGAGGAGCTCAAAAAGCTAAAGGAGTTTGCAAAGGACTTGCCACCAGATCTCAAAGGATTGGCTATAGTCAATTCTGAGAGCATCCGTTTGGCCAGTAATTCATTTGCAAGGCCGGAAGTCCCCGAGGAGCAGAAATCATCTGTCAAGGATGATGATGTCTACCATTTCATTAGCTATGTTCCTGTGGACGGTGTCCTGTATGAGCTTGATGGGCTAAAGGAAGGGCCAATAAGCCTGGGGAAATGCCCAGG-TGG-CG--TTGG-CGA-CA-TAGGTTGGCTGAGGATGGTGCAGCCTGTCATTCAGGAACGCATCGATCGGTTCTCTCAGAATGAGATAAGGTTCAGCGTCA-TGGCTATCCTA-A-AGAACCGGAGGGAGAAGTTCACTTTAGAACTCAAGGAGCTTCAGAGGAAGAGGGAGAACCT-CCTGGCACAGATGGGTGATCCTTCCGCC-AATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGA-GAAGTGGAAGAA-GTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTG-TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG-CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTATTTGTCTCGATTGCCGTGGTT-TTTGTCAATGTAGAGATGGCTGACTAGCCTTTTGTTTTCGCGGTAG-TGTTTGAACCATGTGATGATTATTATCTT-TAGTTATAGATATTCGGTCGAATTTAGATGAAATTCAGGCGAATGTCCCTTGAAATAGATTGTCTTATCAGAGTACATGTGTACACTGGAGGGTCATTCCCTATTGCATCCGAGTAGATCTTGTCCTTCCTTTGTCACATTATAAATAATGGAATTGACGGCCTAAAACCTCACATCATGCCATAATC]

[+] EMBL AK104700             [AATCTCACCCATCGCCGACGACCCACGCACGCAGTCCACCAACGCGCCGCCGCCGCCGAATCCGCTTCGCTCCCTCCGCCGCGCCGCGCGCCACCTCCGTCGACGCTGGCCCGACGCGCGCGGTTCGTGAAGGAGGAGGAGGAGGAGGAGCTTCTGCCGGGTCGGACCGTCGGTTTCTCTCGTTGACCTGCAGGAGGGTGCGCAGGGTTTCTTCTTCGACATGTCTTGGGCTGCAATCGAGAATGATCCTGGCATTTTTACTGAACTGTTGCAACAGATGCAACTGAAGGGTCTTCAAGTTGATGAACTCTATTCACTCGATCTGGATGCCCTCAATGATCTTCAGCCAGTTTATGGGCTCATTGTGCTGTACAAATGGCAACCTCCAGAAAAAGATGAGCGTCCTATCAAGGACCCAATCCCAAACCTTTTCTTTGCTAAGCAGATAATTAACAATGCATGTGCCACCCAAGCTATCGTTTCTGTTCTATTAAACTCTCCGGGTATCACCCTTAGTGAGGAGCTCAAAAAGCTAAAGGAGTTTGCAAAGGACTTGCCACCAGATCTCAAAGGATTGGCTATAGTCAATTCTGAGAGCATCCGTTTGGCCAGTAATTCATTTGCAAGGCCGGAAGTCCCCGAGGAGCAGAAATCATCTGTCAAGGATGATGATGTCTACCATTTCATTAGCTATGTTCCTGTGGACGGTGTCCTGTATGAGCTTGATGGGCTAAAGGAAGGGCCAATAAGCCTGGGGAAATGCCCAGG TGG CG  TTGG CGA CA TAGGTTGGCTGAGGATGGTGCAGCCTGTCATTCAGGAACGCATCGATCGGTTCTCTCAGAATGAGATAAGGTTCAGCGTCA TGGCTATCCTA A AGAACCGGAGGGAGAAGTTCACTTTAGAACTCAAGGAGCTTCAGAGGAAGAGGGAGAACCT CCTGGCACAGATGGGTGATCCTTCCGCC AATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGA GAAGTGGAAGAA GTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTG TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTATTTGTCTCGATTGCCGTGGTT TTTGTCAATGTAGAGATGGCTGACTAGCCTTTTGTTTTCGCGGTAG TGTTTGAACCATGTGATGATTATTATCTT TAGTTATAGATATTCGGTCG                                                                                                                                                                        ]
[+] EMBL AK067359             [   CTCACCCATCGCCGACGACCCACGCACGCAGTCCACCAACGCGCCGCCGCCGCCGAATCCGCTTCGCTCCCTCCGCCGCGCCGCGCGCCACCTCCGTCGACGCTGGCCCGACGCGCGCGGTTCGTGAAGGAGGAGGAGGAGGAGGAGCTTCTGCCGGGTCGGACCGTCGGTTTCTCTCGTTGACCTGCAGGAGGGTGCGCAGGGTTTCTTCTTCGACATGTCTTGGGCTGCAATCGAGAATGATCCTGGCATTTTTACTGAACTGTTGCAACAGATGCAACTGAAGGGTCTTCAAGTTGATGAACTCTATTCACTCGATCTGGATGCCCTCAATGATCTTCAGCCAGTTTATGGGCTCATTGTGCTGTACAAATGGCAACCTCCAGAAAAAGATGAGCGTCCTATCAAGGACCCAATCCCAAACCTTTTCTTTGCTAAGCAGATAATTAACAATGCATGTGCCACCCAAGCTATCGTTTCTGTTCTATTAAACTCTCCGGGTATCACCCTTAGTGAGGAGCTCAAAAAGCTAAAGGAGTTTGCAAAGGACTTGCCACCAGATCTCAAAGGATTGGCTATAGTCAATTCTGAGAGCATCCGTTTGGCCAGTAATTCATTTGCAAGGCCGGAAGTCCCCGAGGAGCAGAAATCATCTGTCAAGGATGATGATGTCTACCATTTCATTAGCTATGTTCCTGTGGACGGTGTCCTGTATGAGCTTGATGGGCTAAAGGAAGGGCCAATAAGCCTGGGGAAATGCCCAGG TGG CG  TTGG CGA CA TAGGTTGGCTGAGGATGGTGCAGCCTGTCATTCAGGAACGCATCGATCGGTTCTCTCAGAATGAGATAAGGTTCAGCGTCA TGGCTATCCTA A AGAACCGGAGGGAGAAGTTCACTTTAGAACTCAAGGAGCTTCAGAGGAAGAGGGAGAACCT CCTGGCACAGATGGGTGATCCTTCCGCC AATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGA GAAGTGGAAGAA GTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTG TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTATTTGTCTCGATTGCCGTGGTT TTTGTCAATGTAGAGATGGCTGACTAGCCTTTTGTTTTCGCGGTAG TGTTTGAACCATGTGATGATTATTATCTT TAGTTATAGATATTCGGTCGAATTTAGATGAAATTCAGGCGA                                                                                                                                                  ]
[+] EMBL CA999849             [                                                                                                                                                                                                                        CGACATGTCTTGGGCTGCAATCGAGAATGATCCTGGCATTTTTACTGAACTGTTGCAACAGATGCAACTGAAGGGTCTTCAAGTTGATGAACTCTATTCACTCGATCTGGATGCCCTCAATGATCTTCAGCCAGTTTATGGGCTCATTGTGCTGTACAAATGGCAACCTCCAGAAAAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB678556             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTTCATGTGGACGGTGTCCTGTATGAGCTTGATGGGATAAAGGAAGGGCCAATAAGCCTGGGGAAATGCCCAGG TGG CG  TTGG CGA CA TAGGTTGGCTGAGGATGGTGCAGCCTGTCATTCAGGAACGCATCGATCGGTTCTCTCAGAATGAGATAAGGTTCAGCGTCACTGGCTATCCTA A AGAACCGGAGGGAGAAGTTCACTTTAGAACTCAAGGAGCTTCAGAGGAAGAGGGAGAACCT CCTGGCACAGATGGGTGATCCTTCCGCC AATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATTGAGGAAGA GAAGTGGAAGAA GTGGAAGACAGAGAACATCAGGAGGAAGCTCAACTATGTGCCATTCTTG TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGATAATCCTAGGTGAAATCAACTGTTATTTGTCTAGATTGCCGTGGTT TTTGTCAATGTAGAGATGGCTGACTAACCTTTTGTTTTCGCGGTAG TGTTTGATCCATGTGATGATTATTATCTT TAGTTATAGATATTCGGTAGAATTTAGATGAAATTCAGGTGAATGTCCCTTGAAATAGATTGTCTTATCAGAGTACATGTGTACACTGGAGGGTCATTCCCTATTGCATCCGAGTAGATCTTGTCCTTCCTTTGTCACATTATAAATAATGGAATTGACGGCCTAAAACCTCACATCATGCCATAATC]
[+] EMBL BM419347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAGGTTGGCCGTTTTGGTTGACCATTAGGTTTGCTGAGGATGGTGCACCCTGTCATTCAG  ACGCATCGATCGGTTCTCTCAGAATGAGATAAGGTTCAGCGTCA TGGCTATCCTATATAGAACCGGAGGGAGAAGTTCACTTTAGAACTCAAGGAGCTTCAGAGGAAGAGGGAGAACCT CCTGGCACAGATGGGTGATCCTTCCGCC AATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGA GAAGTGGAAGAA GTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTG TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTATTTGTCTCGATTGCCGTGGTT TTTGTCAATGTAGAGATGGCTGACTAGCCTTTTGTTTTCGCGGTAG TGTTTGAACCATGTGATGATTATTATCTT TAGTTATNGATATTCGGTCGAATTTAGATGAAAaaaaa                                                                                                                                                      ]
[+] EMBL OSC25452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTCAGAGGAAGAGGGAGAACCT CCTGGCACAGATGGGTGATCCTTCCGCC AATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGA GAAGTGGAAGAA GTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTG TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTAT                                                                                                                                                                                                                                                                                              ]
[+] EMBL BQ906595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGAACCTCCCTGGCACANATGGGTGATCCTTCCGCCAAATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTT CTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGACGAAGTGGAAGAACGTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTGCTTCAATTTCCTCAAGATTCTTGAGGAGAGGCA CAGTTGAAGCCCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTATTTGTCTCGA TCCCGTGGTTCTTTGTCAATGTAGAGATGGCTGACTAGCCTTTGGTTTTCGCGGTAGCTGTTTGAACCATGTGATGATTATTATCTTCTAGTTATAGATATTCGGTCGAATTTAGATGAAATTCAGGCGAATGT CCTTGAAATAGACTGTCTTATCAGACTACATGTGTACACTGGAGGGTCATTTCCTA TGCATCCGGGTAGATCTTGTCCTTCCTTGGTCACATTATAAATAATCTCCCTCNCGG CTAAAGCCTCACATCAaaaaaaa   ]
[+] EMBL AU160972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGAGGCTGTAACAGAGAAGATCATAATGGAGGAAGA GAAGTGGAAGAA GTGGAAGACAGAGAACATCAGGAGGAAGCACAACTATGTGCCATTCTTG TTCAATTTCCTCAAGATTCTTGAGGAGAGGCAGCAGTTGAAG CCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAATCCTAGGTGAAATCAACTGTTATTTGTCTCGATTGCCGTGGTT TTTGTCAATGTAGAGATGGCTGACTAGCCTTTTGTTTTCGCGGTAG TGTTTGAACCATGTGATGATTATTATCTT TAGTTATAGATATTCGGTCGAATTTAGATGAAATTCAGGCGAAT                                                                                                                                                ]




>consensus_11019#0
AATCTCACCCATCGCCGACGACCCACGCACGCAGTCCACCAACGCGCCGCCGCCGCCGAA
TCCGCTTCGCTCCCTCCGCCGCGCCGCGCGCCACCTCCGTCGACGCTGGCCCGACGCGCG
CGGTTCGTGAAGGAGGAGGAGGAGGAGGAGCTTCTGCCGGGTCGGACCGTCGGTTTCTCT
CGTTGACCTGCAGGAGGGTGCGCAGGGTTTCTTCTTCGACATGTCTTGGGCTGCAATCGA
GAATGATCCTGGCATTTTTACTGAACTGTTGCAACAGATGCAACTGAAGGGTCTTCAAGT
TGATGAACTCTATTCACTCGATCTGGATGCCCTCAATGATCTTCAGCCAGTTTATGGGCT
CATTGTGCTGTACAAATGGCAACCTCCAGAAAAAGATGAGCGTCCTATCAAGGACCCAAT
CCCAAACCTTTTCTTTGCTAAGCAGATAATTAACAATGCATGTGCCACCCAAGCTATCGT
TTCTGTTCTATTAAACTCTCCGGGTATCACCCTTAGTGAGGAGCTCAAAAAGCTAAAGGA
GTTTGCAAAGGACTTGCCACCAGATCTCAAAGGATTGGCTATAGTCAATTCTGAGAGCAT
CCGTTTGGCCAGTAATTCATTTGCAAGGCCGGAAGTCCCCGAGGAGCAGAAATCATCTGT
CAAGGATGATGATGTCTACCATTTCATTAGCTATGTTCCTGTGGACGGTGTCCTGTATGA
GCTTGATGGGCTAAAGGAAGGGCCAATAAGCCTGGGGAAATGCCCAGGTGGCGTTGGCGA
CATAGGTTGGCTGAGGATGGTGCAGCCTGTCATTCAGGAACGCATCGATCGGTTCTCTCA
GAATGAGATAAGGTTCAGCGTCATGGCTATCCTAAAGAACCGGAGGGAGAAGTTCACTTT
AGAACTCAAGGAGCTTCAGAGGAAGAGGGAGAACCTCCTGGCACAGATGGGTGATCCTTC
CGCCAATAGGCACGCGCCATCTGTTGAGCACTCTCTTGCGGAGGTTGCTGCTCATATTGA
GGCTGTAACAGAGAAGATCATAATGGAGGAAGAGAAGTGGAAGAAGTGGAAGACAGAGAA
CATCAGGAGGAAGCACAACTATGTGCCATTCTTGTTCAATTTCCTCAAGATTCTTGAGGA
GAGGCAGCAGTTGAAGCCCCTGATAGAGAAGGCGAAACAGAAGTCTCACAGCTCTGCTAA
TCCTAGGTGAAATCAACTGTTATTTGTCTCGATTGCCGTGGTTTTTGTCAATGTAGAGAT
GGCTGACTAGCCTTTTGTTTTCGCGGTAGTGTTTGAACCATGTGATGATTATTATCTTTA
GTTATAGATATTCGGTCGAATTTAGATGAAATTCAGGCGAATGTCCCTTGAAATAGATTG
TCTTATCAGAGTACATGTGTACACTGGAGGGTCATTCCCTATTGCATCCGAGTAGATCTT
GTCCTTCCTTTGTCACATTATAAATAATGGAATTGACGGCCTAAAACCTCACATCATGCC
ATAATC
clustalw multiple alignements is not computed in this case