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Oryza sativa
cluster # 11028 cluster # 11028       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11028#0 length = 1390 sequences # 6  
consensus_11028#1 length = 694 sequences # 1  
consensus_11028#2 length = 678 sequences # 1  

consensusID : consensus_11028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1390
fasta sequence
                              [ATAAAGAACTCTTGCCTGCAACTGTGCGTGGCCGGTGGCGATGGCGACTCTACCCTAGTGTATTCTCCGCTCTGCCGCCTCCACCAGGACCACCACCACCTTCGCTACCCGGCGCCGTACCCTGCGCAGCCGCGGGGCACCTCGGCGGCGTAACGAGGCGAGGGGGATCGGACGCGCGCGCGCGCGCGAGGAGAAAGGCCGGGGGGGATCAGCGATGAGCTTCGCGGATCTGGAGGCCGGCGCGGTGCGGGCGCCCAGGAGGGCGCGGGGCCCCGACGCCACGCGCGCGCTCGTCTTCCAGATCACCACCGCCGTGGCCTCCTACCGCCGCCTCCTCAACTCGCTCGGGACGCCCAAGGACACCCCCGCCCTTCGTGACCAGCTGCAGAAGACTAGTCATAACATTCTTCAATTGGCAAAGGATGCGAAGGAGAAGCTCAGGAGAGCTGCTGAGGCAGACAAGAACGCCGATACTAGTGCAGACAAGAGGGTTGCTGACATGAAGCTTGCCAAGGATTTTGCCACGACGATGGAGGAGTATGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCAGACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATA-CAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAACTCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCA-TTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAATAAACTTGTCGTTGTATCATCAACGCCCTCACACTTCAGTGGCTTGGGTTTCATACGTGGAATAAATATGG]

[+] EMBL AK071767             [ATAAAGAACTCTTGCCTGCAACTGTGCGTGGCCGGTGGCGATGGCGACTCTACCCTAGTGTATTCTCCGCTCTGCCGCCTCCACCAGGACCACCACCACCTTCGCTACCCGGCGCCGTACCCTGCGCAGCCGCGGGGCACCTCGGCGGCGTAACGAGGCGAGGGGGATCGGACGCGCGCGCGCGCGCGAGGAGAAAGGCCGGGGGGGATCAGCGATGAGCTTCGCGGATCTGGAGGCCGGCGCGGTGCGGGCGCCCAGGAGGGCGCGGGGCCCCGACGCCACGCGCGCGCTCGTCTTCCAGATCACCACCGCCGTGGCCTCCTACCGCCGCCTCCTCAACTCGCTCGGGACGCCCAAGGACACCCCCGCCCTTCGTGACCAGCTGCAGAAGACTAGTCATAACATTCTTCAATTGGCAAAGGATGCGAAGGAGAAGCTCAGGAGAGCTGCTGAGGCAGACAAGAACGCCGATACTAGTGCAGACAAGAGGGTTGCTGACATGAAGCTTGCCAAGGATTTTGCCACGACGATGGAGGAGTATGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCAGACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATA CAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAACTCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCA TTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACGGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAATAAACTTGTCGTTGTATCATCAACGCCCTCACACTTCAGTGGCTTGGGTTTCATACGTGGAATAAATATG ]
[+] EMBL CB651270             [   AAGAACTCTTGCCTGCAACTGTGCGTGGCCGGTGGCGATGGCGACTCTACCCTAGTGTATTCTCCGCTCTGCCGCCTCCACCAGGACCACCACCACCTTCGCTACCCGGCGCCGTACCCTGCGCAGCCGCGGGGCACCTCGGCGGCGTAACGAGGCGAGGGGGATCGGACGCGCGCGCGCGCGCGAGGAGAAAGGCCGGGGGGGATCAGCGATGAGCTTCGCGGATCTGGAGGCCGGCGCGGTGCGGGCGCCCAGGAGGGCGCGGGGCCCCGACGCCACGCGCGCGCTCGTCTTCCAGATCACCACCGCCGTGGCCTCCTACCGCCGCCTCCTCAACTCGCTCGGGACGCCCAAGGACACCCCCGCCCTTCGTGACCAGCTGCAGAAGACTAGTCATAACATTCTTCAATTGGCAAAGGATGCGAAGGAGAAGCTCAGGAGAGCTGCTGAGGCAGACAAGAACGCCGATACTAGTGCAGACAAGAGGGTTGCTGACATGAAGCTTGCCAAGGATTTTGCCACGACGATGGAGGAGTATGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCAGACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB672413             [                           GTGGCCGGTGGCGATGGCGACTCTACCCTAGTGTATTCTCCGCTCTGCCGCCTCCACCAGGACCACCACCACCTTCGCTACCCGGCGCCGTACCCTGCGCAGCCGCGGGGCACCTCGGCGGCGTAACGAGGCGAGGGGGATCGGACGCGCGCGCGCGCGCGAGGAGAAAGGCCGGGGGGGATCAGCGATGAGCTTCGCGGATCTGGAGGCCGGCGCGGTGCGGGCGCCCAGGAGGGCGCGGGGCCCCGACGCCACGCGCGCGCTCGTCTTCCAGATCACCACCGCCGTGGCCTCCTACCGCCGCCTCCTCAACTCGCTCGGGACGCCCAAGGACACCCCCGCCCTTCGTGACCAGCTGCAGAAGACTAGTCATAACATTCTTCAATTGGCAAAGGATGCGAAGGAGAAGCTCAGGAGAGCTGCTGAGGCAGACAAGAACGCCGATACTAGTGCAGACAAGAGGGTTGCTGACATGAAGCTTGCCAAGGATTTTGCCACGACGATGGAGGAGTATGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCAGACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB651271             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CACGACGATGGAGGAGTATGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCAGACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATA CAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAACTCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCA TTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAATAAACTTGTCGTTGTATCATCAACGCCCTCACACTTCAGTGGCTTGGGTTTCATACGTGGAATAAATATGG]
[-] EMBL CB643455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cgGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGGTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATA CAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAACTCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCA TTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTGGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTCTCTTGAAGACC                                                                                ]
[+] EMBL BQ906821             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATACCTAACATTGAGAATTCTGCAGCAGCAACCCAAGAGGCNAAGACAGAAATCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCAGTTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAAC AAAGAGCAACTAAGTTCTGTCTTGTAAAaaaaa                                                                             ]


>consensus_11028#0 ATAAAGAACTCTTGCCTGCAACTGTGCGTGGCCGGTGGCGATGGCGACTCTACCCTAGTG TATTCTCCGCTCTGCCGCCTCCACCAGGACCACCACCACCTTCGCTACCCGGCGCCGTAC CCTGCGCAGCCGCGGGGCACCTCGGCGGCGTAACGAGGCGAGGGGGATCGGACGCGCGCG CGCGCGCGAGGAGAAAGGCCGGGGGGGATCAGCGATGAGCTTCGCGGATCTGGAGGCCGG CGCGGTGCGGGCGCCCAGGAGGGCGCGGGGCCCCGACGCCACGCGCGCGCTCGTCTTCCA GATCACCACCGCCGTGGCCTCCTACCGCCGCCTCCTCAACTCGCTCGGGACGCCCAAGGA CACCCCCGCCCTTCGTGACCAGCTGCAGAAGACTAGTCATAACATTCTTCAATTGGCAAA GGATGCGAAGGAGAAGCTCAGGAGAGCTGCTGAGGCAGACAAGAACGCCGATACTAGTGC AGACAAGAGGGTTGCTGACATGAAGCTTGCCAAGGATTTTGCCACGACGATGGAGGAGTA TGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCA GACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCC TGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGA AATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACA ACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGG AGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGC AAAGACAGAACTCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCAT TCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGG CGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCC TTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTT ATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGG CTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGT ATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAAT AAACTTGTCGTTGTATCATCAACGCCCTCACACTTCAGTGGCTTGGGTTTCATACGTGGA ATAAATATGG



consensusID : consensus_11028#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [AACTATATTACAGGTGGTATAGAAGCCTGGGATTCCGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAAATCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCATTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGACGTCATGCGTGAGTCTTTTTTTCATGGCTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCACCTAAAAAAAAAAAAAAAAA]

[-] EMBL CA762857             [AACTATATTACAGGTGGTATAGAAGCCTGGGATTCCGGTAAAATTCCTGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAAATCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCATTCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGAATTGTGAGTTCATTTCCTGACGTCATGCGTGAGTCTTTTTTTCATGGCTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCACCTAAAAAAAAAAAAAAAAA]


>consensus_11028#1 AACTATATTACAGGTGGTATAGAAGCCTGGGATTCCGGTAAAATTCCTGAACAGCATGCG CTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGAAATTGTTTTCAAT GAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAA GTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAG GAAATCGATACAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGCAAAGACAGAAATC GCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCATTCTTCTGGTGATC TTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGGCGCGACGTAGAGA TTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCCTTGATCTTCTCGA AGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTCTGA ATTGTGAGTTCATTTCCTGACGTCATGCGTGAGTCTTTTTTTCATGGCTGCCTTGAGTGA ACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGTATTTTCAGTGAATA AAAACAAAAGAGCACCTAAAAAAAAAAAAAAAAA



consensusID : consensus_11028#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence
                              [GCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGTAGCAGCAACCAAAGAGGCAAAGACAGAAGTCGCGAAAGCGTCCAAGACTCAGAAATCGGATTCATCACTGCTTTGCATTTTTTTGGTGATTTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACCTGAGGCGCGACGTAGAGATTACTGGTGCCCTCGGTAGCATATTTAAAAGCCATTTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCCCGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTTTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCCCTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAATAAACTTGTCGTTGTATCATCAACGCCCTCCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763442             [GCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGTAGCAGCAACCAAAGAGGCAAAGACAGAAGTCGCGAAAGCGTCCAAGACTCAGAAATCGGATTCATCACTGCTTTGCATTTTTTTGGTGATTTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACCTGAGGCGCGACGTAGAGATTACTGGTGCCCTCGGTAGCATATTTAAAAGCCATTTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCCCGAAACTGTACAAGTTTGTTGTTTGTTATAGGTTTTTTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCCCTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAATAAACTTGTCGTTGTATCATCAACGCCCTCCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11028#2 GCAATTGGATAATGAAATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTAT TCAAGATATTCAACAACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACT TGTGCATATTCAAGGAGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGTAGC AGCAACCAAAGAGGCAAAGACAGAAGTCGCGAAAGCGTCCAAGACTCAGAAATCGGATTC ATCACTGCTTTGCATTTTTTTGGTGATTTTCGGGGTTGTCTTGCTAATTGTGATAATAGT TTTGGCAACCTGAGGCGCGACGTAGAGATTACTGGTGCCCTCGGTAGCATATTTAAAAGC CATTTGCATCGGTCCTTGATCTTCTCGAAGTGCAAAGACTGTCGCTCCCGAAACTGTACA AGTTTGTTGTTTGTTATAGGTTTTTTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGA GTCTTTTTTTCATGGCTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAAC TTTCCCTTTGTAAGTATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGT AAACCCCCGTAAAATAAACTTGTCGTTGTATCATCAACGCCCTCCCCCTTCCAAAAAAAA AAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11028#0      ATAAAGAACTCTTGCCTGCAACTGTGCGTGGCCGGTGGCGATGGCGACTCTACCCTAGTG 60
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      TATTCTCCGCTCTGCCGCCTCCACCAGGACCACCACCACCTTCGCTACCCGGCGCCGTAC 120
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      CCTGCGCAGCCGCGGGGCACCTCGGCGGCGTAACGAGGCGAGGGGGATCGGACGCGCGCG 180
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      CGCGCGCGAGGAGAAAGGCCGGGGGGGATCAGCGATGAGCTTCGCGGATCTGGAGGCCGG 240
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      CGCGGTGCGGGCGCCCAGGAGGGCGCGGGGCCCCGACGCCACGCGCGCGCTCGTCTTCCA 300
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      GATCACCACCGCCGTGGCCTCCTACCGCCGCCTCCTCAACTCGCTCGGGACGCCCAAGGA 360
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      CACCCCCGCCCTTCGTGACCAGCTGCAGAAGACTAGTCATAACATTCTTCAATTGGCAAA 420
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      GGATGCGAAGGAGAAGCTCAGGAGAGCTGCTGAGGCAGACAAGAACGCCGATACTAGTGC 480
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      AGACAAGAGGGTTGCTGACATGAAGCTTGCCAAGGATTTTGCCACGACGATGGAGGAGTA 540
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      TGGAAAACTTCAAAATCTTGCGATTCAAAGGGAGATGGCATATAAGCCAGTTGTTCCCCA 600
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      GACATCTCAGCCAAACTATACTACAGGTGGTATAGAAGCCAGGGATTCTGGTAAAATTCC 660
consensus_11028#1      -------------AACTATATTACAGGTGGTATAGAAGCCTGGGATTCCGGTAAAATTCC 47
consensus_11028#2      ------------------------------------------------------------
                                                                                   

consensus_11028#0      TGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGA 720
consensus_11028#1      TGAACAGCATGCGCTACTCGCAGAATCAAAGAGGCAAGAGGTGCTGCAATTGGATAATGA 107
consensus_11028#2      ---------------------------------------------GCAATTGGATAATGA 15
                                                                    ***************

consensus_11028#0      AATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACA 780
consensus_11028#1      AATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACA 167
consensus_11028#2      AATTGTTTTCAATGAAGCTATCATTGAGGAAAGGGAGCAAGCTATTCAAGATATTCAACA 75
                       ************************************************************

consensus_11028#0      ACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGG 840
consensus_11028#1      ACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGG 227
consensus_11028#2      ACAGATTGGTGAAGTACATGAAGCATTTAAGGATCTTGCTACACTTGTGCATATTCAAGG 135
                       ************************************************************

consensus_11028#0      AGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGC 900
consensus_11028#1      AGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGCAGCAGCAACCAAAGAGGC 287
consensus_11028#2      AGTTACAATCGAGGAAATCGATACAAACATTGAGAATTCTGTAGCAGCAACCAAAGAGGC 195
                       ***************************************** ******************

consensus_11028#0      AAAGACAGAACTCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCAT 960
consensus_11028#1      AAAGACAGAAATCGCGAAAGCGTCCAAGACTCAGAAATCGAATTCATCACTGCTCTGCAT 347
consensus_11028#2      AAAGACAGAAGTCGCGAAAGCGTCCAAGACTCAGAAATCGGATTCATCACTGCTTTGCAT 255
                       ********** ***************************** ************* *****

consensus_11028#0      TCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGG 1020
consensus_11028#1      TCTTCTGGTGATCTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACTTGAGG 407
consensus_11028#2      TTTTTTGGTGATTTTCGGGGTTGTCTTGCTAATTGTGATAATAGTTTTGGCAACCTGAGG 315
                       * ** ******* ***************************************** *****

consensus_11028#0      CGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCC 1080
consensus_11028#1      CGCGACGTAGAGATTACTGGTGCACTCGGTAGCATATTTAAAAGCCATCTGCATCGGTCC 467
consensus_11028#2      CGCGACGTAGAGATTACTGGTGCCCTCGGTAGCATATTTAAAAGCCATTTGCATCGGTCC 375
                       *********************** ************************ ***********

consensus_11028#0      TTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTT 1140
consensus_11028#1      TTGATCTTCTCGAAGTGCAAAGACTGTCGCTCACGAAACTGTACAAGTTTGTTGTTTGTT 527
consensus_11028#2      TTGATCTTCTCGAAGTGCAAAGACTGTCGCTCCCGAAACTGTACAAGTTTGTTGTTTGTT 435
                       ******************************** ***************************

consensus_11028#0      ATAGGTTTTCTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGG 1200
consensus_11028#1      ATAGGTTTTCTGAATTGTGAGTTCATTTCCTGACGTCATGCGTGAGTCTTTTTTTCATGG 587
consensus_11028#2      ATAGGTTTTTTGAATTGTGAGTTCATTTCCTGATGTCATGCGTGAGTCTTTTTTTCATGG 495
                       ********* *********************** **************************

consensus_11028#0      CTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGT 1260
consensus_11028#1      CT-GCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCACTTTGTAAGT 646
consensus_11028#2      CTTGCCTTGAGTGAACAGTGATGCTCTTTTATTTTGCCGACGAACTTTCCCTTTGTAAGT 555
                       ** ********************************************** **********

consensus_11028#0      ATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAAT 1320
consensus_11028#1      ATTTTCAGTGAATAAAAACAAAAGAGCACCTAAAAAAAAAAAAAAAAA------------ 694
consensus_11028#2      ATTTTCAGTGAATAAAAACAAAAGAGCAACTAAGTTCTGTCTTGTAAACCCCCGTAAAAT 615
                       **************************** ****            ***            

consensus_11028#0      AAACTTGTCGTTGTATCATCAACGCCCTCACACTTCAGTGGCTTGGGTTTCATACGTGGA 1380
consensus_11028#1      ------------------------------------------------------------
consensus_11028#2      AAACTTGTCGTTGTATCATCAACGCCCTCCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAA 675
                                                                                   

consensus_11028#0      ATAAATATGG 1390
consensus_11028#1      ----------
consensus_11028#2      AAA------- 678
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)