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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11047#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3300 fasta sequence
[TCCGGAGCCCTTACGGCGGATGGATGGGGAAACCCGCGCCGGCGCCGCGTGGGTGTCCGATGCCGGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGGCGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGACGACGGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAATGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCCAAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGACAATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCTAAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGTTTTAGTGCAGTAGAAATATCTTGGTGGCAAACACATTCTTCTTCCTGTTTCTAAACAAATCTAGTCTCCACTGTAAACGGTGAAGTGCACAGGCTATGATGGAAACGGGAGCAGCATGAATATTCTTCAATCGTTACTCCAGAGATAGTGCTTTCACATAGGAACTGAACTGCAAACATTCTTTATCTGCCCTCTCTGCTGCAATGATCCTCAACTTGATTATATTATTTCTGGGTAGCCATGCTGCAAGTGCATCAAATACCCTTTTTCCTGGCCAACCTCTCTCAGGCAGTGAAACCTTAGTATCAGAAAATGGCATTTTTGAGTTGGGTTTTTTCTCCCCAAGTGGTACAAAGCACTACCTCGGCATACGATACAAGAACATTACAAGCAGCAATCCAGTAAACTTCTGGCTGGGAAACAGGATTCCCATTACTAACTTCCTTAATGCAACATTGTATATCGATGCCGGTGAACTTTATATTGAGGAGCTTGGCTCTGTTATATGGACCTCAAATTCAATGAAAAATGCATCAGACACTGCTGTGGCAGTTATCCTTAATACTGGAAACTTTGTAGTAAGAGATCAGCTCAACTCTTCTATGGTCGTATGGCAGAGCTTTGATCACCCAGCTGATGCACTGCTCCCAGGAGCATGGCTTGGATTGGATATGGTCATCGGAGCCAACATCTTGCTTACCCTGTACAAGCCTCCTTATAATTGTACCCTCATGATTGACCAAAGTAGGAAGAGGGGATTTATCATGTTCATTGATGGGCATGACTATCTTGGAACATTTCCAGATTGGGTGGTTACCTATGAAGAAAATGGCAGTTTGGTACGATTAAATGATCCAGAAATTCCAAATGAAATTGAATTCATGAAATTGCATCTGGGGCAAGTCAGTTTGTTGAAGTGGATAAATAATGCAACAAGTAGTGGTTGGCAACCTGTGTGGAGCTACCCTTCCAGCTGCAAAGTTAGTGCTTTTCACTGTGGTGTGCACAAGCACAGGAACATGCAAATGCATTGATGGTTTCAGTCCAACGGAGCCAAGTGAATGGGAGCTTGGACATTTTGTTAGTGGCTGCTCTAGAATTACCCCCTCAAACTGTCAAGGTGCTGTTTCCACCGACTCGTTTGTTTTGTTAGACAACTTGCAGGGCTTTCCTGACAATCCTCAGAATGTGACGGCAGCAACTAGTGAAGAATGTCAAGCTGCCTGTCTAAGCGAATGCTTCTGCGCAGCATACTCATATCATTCTGGCTGCAAGATATGGCACAGCATGTTGCTTAATTTGACTTTAGCTGATAACCCTCCATACACCGAGATTTATATGCGTATAGGTTCTCCAAATAAAAGCAGGCTGCACATACTGGTTTTCATACTAATTTTTGGGTCAATAGCGGTTATTCTTGTCATGTTGATGCTTCTCTTGATATACAAGAAGAGATCCTCATGTGTTGCAAGCCAGGCAAAAATGGAAGGTTTTCTTGCAGTGTACTCTTATGCACAGGTCAAGAAAGCTACAAGAAACCTCTCTGACAAACTGGGGGAAGGAAGCTTTGGAAGTGTTTTCAAGGGAACAATTGCAGGTTCAACGATTGTTGCTGTGAAGAAGCTCAAAGGCCTAGGGCACACAGAGAAGCAATTCCGGACAGAGGTGCAGACTGTTGGGATGATCCAACATACTAATCTTGTCCGTCTTTTGGGATTCTGTACTGGAGGGACTAGAAGGTTGCTAGTCTATGAGTATATGCCAAACGGTTCTTTGGATTCTCATCTCTTTTCAGAAACCTCAAGGGTATTAAGTTGGAATCTTCGCCATCGGATTGTCATTGGTATTGCTAGAGGTTTGGCCTACCTGCACGAGGAATGCAGGGACTCCATCATACATTGTGACATTAAGCCTGAAAATATACTACTTGATGCGGAGTTATGCCCCAAAATTGCAGATTTTGGTATGGCAAAGCTTCTTGGACGGGAATTCAGCGCGGTACTCACCAGTATCCGAGGAACCATTGGCTATCTTGCACCAGAGTGGATATCTGGACAGCCTATTACCTACAAGGCAGACGTCTATAGTTTTGGTGTCCTGCTCTTCGAAATAATATCAGGGCGGAGGAGTACGGAGAAAATTCAACATGGAAACCATCGATATTTCCCCCTTTATGCTGCTGCTAAAGTGAACGAAGGAGATGTTTTATGCTTGCTTGATGACA-GGCTGGAAGGAAATGCGAGTTTGAAGGAGCTGGATGTTGCCTGCCGAGTTGCTTGTTGGTGCATCCAGGATGATGAGATCCACAGGCCATCAATGAGGCAAGTTATTCACATGTTGGAAGGTATTGTCGGCGTTGAATTGCCTCCTATCCCGGCTTCCTTTCAAAACCTGATGGACGGTTATGATAGTGATTTATATTCTGTGGAAGTTTGATATCGGATCTCTTCA-GTTGCTAGTAGTTTTTATTGCGTGTTTCTTGACCTTGATCTGTATCACTCTATTCTATTTGTTTTGTAGTATTCGGCTATGTAGCTGTCTTTGAACTCTGTTTAGTCTGAACTATGTTCCA-TTGTTGTCAATTCTTTGTAATGGGATTATGTTGTGGTTGAAGTCTTGCATAAGTATAACTTCAAGAGCACATTAAAAAAAAAA]
[+] EMBL CB635438 [TCCGGAGCCCTTACGGCGGATGGATGGGGAAACCCGCGCCGGCGCCGCGTGGGTGTCCGATGCCGGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGGCGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGACGACGGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAATGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCCAAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGACAATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCTAAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGTTTTAGTGCAGTAGAAATATCTTGGTGGCAAACACATTCTTCTTCCTGTTTCTAAACAAATCTAGTCTCCACTGTAAACGGTGAAGTGCACAGGCTATGATGGAAACGGGAGCAGCATGAATATTCTTCAATCGTTACTCCAGAGATAGTGCTTTCACATAGGAACTGAACTGCAAACATTCTTTATCTGC ]
[+] EMBL AK067417 [ CGGCGAAGTGCACAGGCTATGATGGAAACGGGAGCAGCATGAATATTCTTCAATCGTTACTCAAGAGATAGTGCTTTCACATAGGAACTGAACTGCAAACATTCTTTATCTGCCCTCTCTGCTGCAATGATCCTCAACTTGATTATATTATTTCTGGGTAGCCATGCTGCAAGTGCATCAAATACCCTTTTTCCTGGCCAACCTCTCTCAGGCAGTGAAACCTTAGTATCAGAAAATGGCATTTTTGAGTTGGGTTTTTTCTCCCCAAGTGGTACAAAGCACTACCTCGGCATACGATACAAGAACATTACAAGCAGCAATCCAGTAAACTTCTGGCTGGGAAACAGGATTCCCATTACTAACTTCCTTAATGCAACATTGTATATCGATGCCGGTGAACTTTATATTGAGGAGCTTGGCTCTGTTATATGGACCTCAAATTCAATGAAAAATGCATCAGACACTGCTGTGGCAGTTATCCTTAATACTGGAAACTTTGTAGTAAGAGATCAGCTCAACTCTTCTATGGTCGTATGGCAGAGCTTTGATCACCCAGCTGATGCACTGCTCCCAGGAGCATGGCTTGGATTGGATATGGTCATCGGAGCCAACATCTTGCTTACCCTGTACAAGCCTCCTTATAATTGTACCCTCATGATTGACCAAAGTAGGAAGAGGGGATTTATCATGTTCATTGATGGGCATGACTATCTTGGAACATTTCCAGATTGGGTGGTTACCTATGAAGAAAATGGCAGTTTGGTACGATTAAATGATCCAGAAATTCCAAATGAAATTGAATTCATGAAATTGCATCTGGGGCAAGTCAGTTTGTTGAAGTGGATAAATAATGCAACAAGTAGTGGTTGGCAACCTGTGTGGAGCTACCCTTCCAGCTGCAAAGTTAGTGCTTTTCACTGTGGTGTGCACAAGCACAGGAACATGCAAATGCATTGATGGTTTCAGTCCAACGGAGCCAAGTGAATGGGAGCTTGGACATTTTGTTAGTGGCTGCTCTAGAATTACCCCCTCAAACTGTCAAGGTGCTGTTTCCACCGACTCGTTTGTTTTGTTAGACAACTTGCAGGGCTTTCCTGACAATCCTCAGAATGTGACGGCAGCAACTAGTGAAGAATGTCAAGCTGCCTGTCTAAGCGAATGCTTCTGCGCAGCATACTCATATCATTCTGGCTGCAAGATATGGCACAGCATGTTGCTTAATTTGACTTTAGCTGATAACCCTCCATACACCGAGATTTATATGCGTATAGGTTCTCCAAATAAAAGCAGGCTGCACATACTGGTTTTCATACTAATTTTTGGGTCAATAGCGGTTATTCTTGTCATGTTGATGCTTCTCTTGATATACAAGAAGAGATCCTCATGTGTTGCAAGCCAGGCAAAAATGGAAGGTTTTCTTGCAGTGTACTCTTATGCACAGGTCAAGAAAGCTACAAGAAACCTCTCTGACAAACTGGGGGAAGGAAGCTTTGGAAGTGTTTTCAAGGGAACAATTGCAGGTTCAACGATTGTTGCTGTGAAGAAGCTCAAAGGCCTAGGGCACACAGAGAAGCAATTCCGGACAGAGGTGCAGACTGTTGGGATGATCCAACATACTAATCTTGTCCGTCTTTTGGGATTCTGTACTGGAGGGACTAGAAGGTTGCTAGTCTATGAGTATATGCCAAACGGTTCTTTGGATTCTCATCTCTTTTCAGAAACCTCAAGGGTATTAAGTTGGAATCTTCGCCATCGGATTGTCATTGGTATTGCTAGAGGTTTGGCCTACCTGCACGAGGAATGCAGGGACTCCATCATACATTGTGACATTAAGCCTGAAAATATACTACTTGATGCGGAGTTATGCCCCAAAATTGCAGATTTTGGTATGGCAAAGCTTCTTGGACGGGAATTCAGCGCGGTACTCACCAGTATCCGAGGAACCATTGGCTATCTTGCACCAGAGTGGATATCTGGACAGCCTATTACCTACAAGGCAGACGTCTATAGTTTTGGTGTCCTGCTCTTCGAAATAATATCAGGGCGGAGGAGTACGGAGAAAATTCAACATGGAAACCATCGATATTTCCCCCTTTATGCTGCTGCTAAAGTGAACGAAGGAGATGTTTTATGCTTGCTTGATGACA GGCTGGAAGGAAATGCGAGTTTGAAGGAGCTGGATGTTGCCTGCCGAGTTGCTTGTTGGTGCATCCAGGATGATGAGATCCACAGGCCATCAATGAGGCAAGTTATTCACATGTTGGAAGGTATTGTCGGCGTTGAATTGCCTCCTATCCCGGCTTCCTTTCAAAACCTGATGGACGGTTATGATAGTGATTTATATTCTGTGGAAGTTTGATATTGGATCTCTTCA GTTGCTAGTAGTTTTTATTGCGTGTTTCTTGACCTTGATCTGTATCACTCTATTCTATTTGTTTTGTAGTATTCGGCTATGTAGCTGTCTTTGAACTCTGTTTAGTCTGAACTATGTTCCA TTGTTGTCAATTCTTTGTAATGGGATTATGTTGTGGTTGAAGTCTTGCATAAGTATAACTTCA ]
[-] EMBL CB635439 [ GGACTCCATCATACATTGTGACATTAAGCCTGAAAATATACTACTTGATGCGGAGTTATGCCCCAAAATTGCAGATTTTGGTATGGCAAAGCTTCTTGGACGGGAATTCAGCGTGGTACTCACCAGTATCCGAGGAACCATTGGCTATCTTGCACCAGAGTGGATATCTGGACAGCCTATTACCTACAAGGCAGACGTCTATAGTTTTGGTGTCCTGCTCTTCGAAATAATATCAGGGCGGAGGAGTACGGAGAAAATTCAACATGGAAACCATCGATATTTCCCCCTTTATGCTGCTGCTAAAGTGAACGAAGGAGATGTTTTATGCTTGCTTGATGACA GGCTGGAAGGAAATGCGAGTTTGAAGGAGCTGGATGTTGCCTGCCGAGTTGCTTGTTGGTGCATCCAGGATGATGAGATCCACAGGCCATCAATGAGGCAAGTTATTCACATGTTGGAAGGTATTGTCGGCGTTGAATTGCCTCCTATCCCGGCTTCCTTTCAAAACCTGATGGACGGTTATGATAGTGATTTATATTCTGTGGAAGTTTGATATCGGATCTCTTCA GTTGCTAGTAGTTTTTATTGCGTGTTTCTTGACCTTGATCTGTATCACTCTATTCTATTTGTTTTGTAGTATTCGGCTATGTAGCTGTCTTTGAACTCTGTTTAGTCTGAACTATGTTCCA TTGTTGTCAATTCTTTGTAATGGGATTATGTTGTGGTTGAAGTCTTGCATAAGTAAAAaaaaaaga ]
[+] EMBL BQ907337 [ ccgAAGTGAACGAAGGAGATGTTTTATGCTTGCTTGATGACACGGCTGGAAGGAAATGCGAGTTTGAAGGAGCTGGATGTTGCCTGCCGAGTTGCTTGTTGGTGCATCCAGGATGATGAGATCCACAGGCCATCAATGAGGCAAGTTATTCACATGTTGGAAGGTATTGTCGGCGTTGAATTGCCTCCTATCCCGGCTTCCTTTC AAACCTGATGGACGGTTATGATAGTGATTTATATTCTGTGGAAGTTTGATATCGGATCTCTTCACGTTGCTAGTAGTTTTTATTGCGTGTTTCTTGACCTTGATCTGTATCACTCTATTCTATTTGTTTTGTAGTATTCGGCTATGTAGCTGTCTTTGAACTCTGTTTAGTCTGAACTATGTTCCACTTGTTGTC ATTCTTTGTAATGGGATTATGTTGTGGTTGAAGTCTTGCATAAGTATAACTTCATTTGCACATTAAAAAAAAAA]
consensusID : consensus_11047#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1203 fasta sequence
[AACCCGCGCCGGCGCCGCGTGGGTGTCCGATGCCAGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGGCGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGGCGACGGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAATGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCCAAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGACAATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCTAAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGGCCAGTCTTGGATCATATCAAGTCAATGGTACTTGGAACAGATCATGTTGGGTTGTGGGATGCAAATGTCTCATAAAGTCAGAAACGGTCTACCTATCGAGGTTTCCTTTTCCAGAGGAAATCCCTTCTTGTTTCAGGATGCATGCACTTTTGTACTTCTATTCATGACATCGTCTGCATGCCAGTGCTGAAAGTACATCACTGATCGTAGCAAGCACATGTGGATCAAAACAGTAGCTGTCCAACCGAATGGCCATTTCCCTAACTTGGAAAGTGATTATTAGAGTTTGTGTCGAATATGTGTACAAAGTCAGTTACAGTTTAGGACTTGGAGTTGTACTAGGTGTTATGACTAGAGTAAGAGTCAGACTCTATCCTAGAACCTCTCTTAAATAGAGGGGCGGACCTGCTGTAACCGCACATGGCGACTTAGTATTGCGAGAGGGAGCGGCTGCCAGTGGCGTCCGGCCATGAGTCGTTGTAACTCTAATACGCTGTAATATGCTGGATCGGGGAGAAGCGCCCGTAATTAGTGCCCCGGGGATGTAGGTTTCGGCTGAACCTCGTTAACAAATATCGTTCCTCGGTG]
[+] EMBL CB665692 [AACCCGCGCCGGCGCCGCGTGGGTGTCCGATGCCAGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGGCGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGGCGACGGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAATGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCCAAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGACAATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCTAAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGGCCAGTCTTGGATCATATCAAGTCAATGGTACTTGGAACAGATCATGTTGGGTTGTGGGATGCAAATGTCTCATAAAGTCAGAAACGGTCTACCTATCGAGGTTTCCTTTTCCAGAGGAAATCCCTTCTTGTTTCAGGATGCATGCACTTTTGTACTTCTATTCATGACATCGTCTGCATGCCAGTGCTGAAAGTACATCACTGATCGTAGCAAGCACATGTGGA ]
[+] EMBL CB665688 [AACCCGCGCCGGCGCCGCGTGGGTGTCCGATGCCAGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGGCGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGGCGACGGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAATGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCCAAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGACAATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCTAAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGGCCAGTCTTGGATCATATCAAGTCAATGGTACTTGGAACAGATCATGTTGGGTTGTGGGATGCAAATGTCTCATAAAGTCAGAAACGGTCTACCTATCGAGGTTTCCTTTTCCAGAGGAAATCCCTTCTTGTTTCAGGATGCATGCACTTTTGTACTTCTATTCATGACATCGT ]
[-] EMBL CB665693 [ CTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGGCCAGTCTTGGATCATATCAAGTCAATGGTACTTGGAACAGATCATGTTGGGTTGTGGGATGCAAATGTCTCATAAAGTCAGAAACGGTCTACCTATCGAGGTTTCCTTTTCCAGAGGAAATCCCTTCTTGTTTCAGGATGCATGCACTTTTGTACTTCTATTCATGACATCGTCTGCATGCCAGTGCTGAAAGTACATCACTGATCGTAGCAAGCACATGTGGATCAAAACAGTAGCTGTCCAACCGAATGGCCATTTCCCTAACTTGGAAAGTGATTATTAGAGTTTGTGTCGAATATGTGTACAAAGTCAGTTACAGTTTAGGACTTGGAGTTGTACTAGGTGTTATGACTAGAGTAAGAGTCAGACTCTATCCTAGAACCTCTCTTAAATAGAGGGGCGGACCTGCTGTAACCGCACATGGCGACTTAGTATTGCGAGAGGGAGCGGCTGCCAGTGGCGTCCGGCCATGAGTCGTTGTAACTCTAATACGCTGTAATATGCTGGATCGGGGAGAAGCGCCCGTAATTAGTGCCCCGGGGATGTAGGTTTCGGCTGAACCTCGTTAACAAATATCGTTCCTCGGTG]
[-] EMBL CB665689 [ GCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCACTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAGTAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTGAAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGGCCAGTCTTGGATCATATCAAGTCAATGGTACTTGGAACAGATCATGTTGGGTTGTGGGATGCAAATGTCTCATAAAGTCAGAAACGGTCTACCTATCGAGGTTTCCTTTTCCAGAGGAAATCCCTTCTTGTTTCAGGATGCATGCACTTTTGTACTTCTATTCATGACATCGTCTGCATGCCAGTGCTGAAAGTACATCACTGATCGTAGCAAGCACATGTGGATCAAAACAGTAGCTGTCCAACCGAATGGCCATTTCCCTAACTTGGAAAGTGATTATTAGAGTTTGTGTCGAATATGTGTACAAAGTCAGTTACAGTTTAGGACTTGGAGTTGTACTAGGTGTTATGACTAGAGTAAGAGTCAGACTCTATCCTAGAACCTCTCTTAAATAGAGGGGCGGACCTGCTGTAACCGCACATGGCGACTTAGTATTGCGAGAGGGAGCGGCTGCCAGTGGCGTCCGGCCATGAGTCGTTGTAACTCTAATACGCTGTAATATGCTGGATCGGGGAGAAGCGCCCGTAATTAGTGCCCCGGGGATGTAGGTTTCGGCTGAACCTCGTTAACAAATATCGTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11047#0 TCCGGAGCCCTTACGGCGGATGGATGGGGAAACCCGCGCCGGCGCCGCGTGGGTGTCCGA 60
consensus_11047#1 ------------------------------AACCCGCGCCGGCGCCGCGTGGGTGTCCGA 30
******************************
consensus_11047#0 TGCCGGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGG 120
consensus_11047#1 TGCCAGCCGGCCGGCCGGCCGGCGCGGTCCAGCGCACTGCGGGCGGGGGACGGTCGACGG 90
**** *******************************************************
consensus_11047#0 CGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGACGAC 180
consensus_11047#1 CGAGCAGCCGCGCGTGGAGGAGGCGGCGGCTGCCGACGATACGGTGCGGACGAGGGCGAC 150
******************************************************* ****
consensus_11047#0 GGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAA 240
consensus_11047#1 GGCATGTCGGGATGTTCGTCGTCAGGCCCCCGCAACCCTAAGGGGAAAGTGATGCAAGAA 210
************************************************************
consensus_11047#0 TGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCC 300
consensus_11047#1 TGTGAAAGCCGGATTAAGGGGAAGGGAAGAACAGACGATCAGTCATGAAATGTTTGACCC 270
************************************************************
consensus_11047#0 AAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGAC 360
consensus_11047#1 AAGAAAAGCAGCGAAGAGTCATGTGGCTTTATGGGTCCATGGGGGGCTACTTGAGTTGAC 330
************************************************************
consensus_11047#0 AATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCT 420
consensus_11047#1 AATGGCAAACTAATTAATTCGGCACCTTATCCGCACATTTTGAGCCACTTATAATAATCT 390
************************************************************
consensus_11047#0 AAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCA 480
consensus_11047#1 AAATTTTATGCTTCTTTGGCTGTATGCTTGGATTTGGCATCTGTACACTTCCAAGTTCCA 450
************************************************************
consensus_11047#0 CTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAG 540
consensus_11047#1 CTGCTTCATAAGTTAAAGTTAAAGTGACCTTTTCTGGGTGTACTGTTTTAATTTGTCCAG 510
************************************************************
consensus_11047#0 TAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTG 600
consensus_11047#1 TAAAGTGGTCTTTTTTAGCAGGATGCACTGATGAGGAGCTGAAACAGGAGCCATCAATTG 570
************************************************************
consensus_11047#0 AAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGTTTTAGTGCAGTAGAA 660
consensus_11047#1 AAGGATTAACGCAAACTCCATTCTGAACGAGCAAAAACAGGAAGGCC-AGTCTTGGA--- 626
******************************************** *** * *
consensus_11047#0 ATATCTTGGTGGCAAACACATTCTTCTTCCTGTTTCTAAACAAATCTAGTCTCCACTGTA 720
consensus_11047#1 ------TCATATCAAGTCAATGGTACTTG--------GAACAGATCATGT--------TG 664
* * *** ** * *** **** *** ** *
consensus_11047#0 AACGGTGAAGTGCACAGGCTATGATGGAAACGGGAGCAGCATGAATATTCTTCAATCGTT 780
consensus_11047#1 GGTTGTGGGATGCAAATGTC-TCATAAAGTCAGAAACGGTCTACCTAT-CGAGGTTTCCT 722
*** **** * * * ** * * * * * * * *** * * *
consensus_11047#0 ACTCCAGAGATAGTGCTTTCACATAGGAACTGAACTGCAAACATTCTTTATCTGCCCTCT 840
consensus_11047#1 TTTCCAGAGGAAATCCCTTCTTGTT----TCAGGATGCATGCACTTTT------------ 766
******* * * * *** * **** ** * **
consensus_11047#0 CTGCTGCAATGATCCTCAACTTGATTATATTATTTCTGGGTAGCCATGCTGCAAGTGCAT 900
consensus_11047#1 -----------GTACTTCTATTCATGACATCG--TCTGCATGCCAGTGCTGAAAGTACAT 813
* ** ** ** * ** **** * * ***** **** ***
consensus_11047#0 CAAATACCCTTTTTCCTGGCCAACCTCTCTCAGGCAGTGAAACCTTAGTATCAGAAAATG 960
consensus_11047#1 CA-------CTGATCGTAGCAAGCACATGTGGATCAAAACAGTAGCTGTCCAACCGAATG 866
** * ** * ** * * * * ** * ** * ****
consensus_11047#0 GCATTTTTGAGTTGGGTTTTTTCTCCCCAAGTGGTACAAAGCACTACCTCGGCATACGAT 1020
consensus_11047#1 GCCATTTC---------CCTAACTTGGAAAGTGATTATTAGAGTTT-----GTGTCGAAT 912
** *** * ** ***** * ** * * * **
consensus_11047#0 ACAAGAACATTACAAGCAGCAATCCAGTAAACTTCTGGCTGGGAAACAGGATTCCCATTA 1080
consensus_11047#1 ATGTGTACAAAGTCAGTTACAGTTTAG--GACTTGGAGTTGT--ACTAGG--TGTTATGA 966
* * *** ** ** * ** **** * ** * *** * ** *
consensus_11047#0 CTAACTTCCTTAATGCAACATTGTATATCGATGCCGGTGAACTTTATATTGAGGAGCTTG 1140
consensus_11047#1 CTAGAGTA---AGAGTCAGACTCTATCCTAGAACCTCT----CTTAAATAGAGGGGC--G 1017
*** * * * * * * *** ** * *** ** **** ** *
consensus_11047#0 GCTCTGTTATATGGACCTCAAATT-CAATGAAAAATGCATCAGACACTGCTGTGGCAGTT 1199
consensus_11047#1 GACCTGCTGTA---ACCGCACATGGCGACTTAGTAT-TGCGAGAGGGAGCGGCTGCCAGT 1073
* *** * ** *** ** ** * * * ** *** ** * ** *
consensus_11047#0 ATCCTTAATACTGGAAACTTTGTAGTAAGAGATCAGCTCAACTCTTCTATGGTCGTATGG 1259
consensus_11047#1 GGCGTCCGGCCATGAGTCGTTGTAAC------TCTAATACGCTGTAATATGCT-GGATCG 1126
* * * ** * ***** ** * ** * **** * * ** *
consensus_11047#0 CAGAGCTTTGATCACCCAGCTGATGCACTGCTCCCAGGAGCATGGCTTGGATTGGATATG 1319
consensus_11047#1 GGGAG----AAGCGCCCG--TAAT-TAGTGCCCCGGGGATGTAGGTTTCGGCTGAACCTC 1179
*** * * *** * ** * *** ** *** ** ** * ** * *
consensus_11047#0 GTCATCGGAGCCAACATCTTGCTTACCCTGTACAAGCCTCCTTATAATTGTACCCTCATG 1379
consensus_11047#1 GTTAACAAATATCGTTCCTCGGTG------------------------------------ 1203
** * * * ** * *
consensus_11047#0 ATTGACCAAAGTAGGAAGAGGGGATTTATCATGTTCATTGATGGGCATGACTATCTTGGA 1439
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 ACATTTCCAGATTGGGTGGTTACCTATGAAGAAAATGGCAGTTTGGTACGATTAAATGAT 1499
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 CCAGAAATTCCAAATGAAATTGAATTCATGAAATTGCATCTGGGGCAAGTCAGTTTGTTG 1559
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 AAGTGGATAAATAATGCAACAAGTAGTGGTTGGCAACCTGTGTGGAGCTACCCTTCCAGC 1619
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TGCAAAGTTAGTGCTTTTCACTGTGGTGTGCACAAGCACAGGAACATGCAAATGCATTGA 1679
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TGGTTTCAGTCCAACGGAGCCAAGTGAATGGGAGCTTGGACATTTTGTTAGTGGCTGCTC 1739
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TAGAATTACCCCCTCAAACTGTCAAGGTGCTGTTTCCACCGACTCGTTTGTTTTGTTAGA 1799
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 CAACTTGCAGGGCTTTCCTGACAATCCTCAGAATGTGACGGCAGCAACTAGTGAAGAATG 1859
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TCAAGCTGCCTGTCTAAGCGAATGCTTCTGCGCAGCATACTCATATCATTCTGGCTGCAA 1919
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GATATGGCACAGCATGTTGCTTAATTTGACTTTAGCTGATAACCCTCCATACACCGAGAT 1979
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TTATATGCGTATAGGTTCTCCAAATAAAAGCAGGCTGCACATACTGGTTTTCATACTAAT 2039
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TTTTGGGTCAATAGCGGTTATTCTTGTCATGTTGATGCTTCTCTTGATATACAAGAAGAG 2099
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 ATCCTCATGTGTTGCAAGCCAGGCAAAAATGGAAGGTTTTCTTGCAGTGTACTCTTATGC 2159
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 ACAGGTCAAGAAAGCTACAAGAAACCTCTCTGACAAACTGGGGGAAGGAAGCTTTGGAAG 2219
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TGTTTTCAAGGGAACAATTGCAGGTTCAACGATTGTTGCTGTGAAGAAGCTCAAAGGCCT 2279
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 AGGGCACACAGAGAAGCAATTCCGGACAGAGGTGCAGACTGTTGGGATGATCCAACATAC 2339
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TAATCTTGTCCGTCTTTTGGGATTCTGTACTGGAGGGACTAGAAGGTTGCTAGTCTATGA 2399
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GTATATGCCAAACGGTTCTTTGGATTCTCATCTCTTTTCAGAAACCTCAAGGGTATTAAG 2459
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TTGGAATCTTCGCCATCGGATTGTCATTGGTATTGCTAGAGGTTTGGCCTACCTGCACGA 2519
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GGAATGCAGGGACTCCATCATACATTGTGACATTAAGCCTGAAAATATACTACTTGATGC 2579
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GGAGTTATGCCCCAAAATTGCAGATTTTGGTATGGCAAAGCTTCTTGGACGGGAATTCAG 2639
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 CGCGGTACTCACCAGTATCCGAGGAACCATTGGCTATCTTGCACCAGAGTGGATATCTGG 2699
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 ACAGCCTATTACCTACAAGGCAGACGTCTATAGTTTTGGTGTCCTGCTCTTCGAAATAAT 2759
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 ATCAGGGCGGAGGAGTACGGAGAAAATTCAACATGGAAACCATCGATATTTCCCCCTTTA 2819
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TGCTGCTGCTAAAGTGAACGAAGGAGATGTTTTATGCTTGCTTGATGACAGGCTGGAAGG 2879
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 AAATGCGAGTTTGAAGGAGCTGGATGTTGCCTGCCGAGTTGCTTGTTGGTGCATCCAGGA 2939
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TGATGAGATCCACAGGCCATCAATGAGGCAAGTTATTCACATGTTGGAAGGTATTGTCGG 2999
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 CGTTGAATTGCCTCCTATCCCGGCTTCCTTTCAAAACCTGATGGACGGTTATGATAGTGA 3059
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 TTTATATTCTGTGGAAGTTTGATATCGGATCTCTTCAGTTGCTAGTAGTTTTTATTGCGT 3119
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GTTTCTTGACCTTGATCTGTATCACTCTATTCTATTTGTTTTGTAGTATTCGGCTATGTA 3179
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GCTGTCTTTGAACTCTGTTTAGTCTGAACTATGTTCCATTGTTGTCAATTCTTTGTAATG 3239
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 GGATTATGTTGTGGTTGAAGTCTTGCATAAGTATAACTTCAAGAGCACATTAAAAAAAAA 3299
consensus_11047#1 ------------------------------------------------------------
consensus_11047#0 A 3300
consensus_11047#1 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||