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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11048#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3291 fasta sequence
[ATTGCACACATATCTTCTCGTTCTTAAATCAAGCTGCTGCCTCTCCCTCCTCCTCTTGACAAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAG---GCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACACTGAGATCTTGCCAACCAAAAAAAAAAATATCCAAAGATTCCCTCGAAGATG]
[+] EMBL AK101797 [ATTGCACACATATCTTCTCGTTCTTAAATCAAGCTGCTGCCTCTCCCTCCTCCTCTTGACAAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAG GCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACACTGAGATCTTGCCAACCAAAAAAAAAAATATCCAAAGATTCCCTCGAAGATG]
[+] EMBL AK099879 [ CCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAGGTAGCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAGACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACACTGAGAT ]
[+] EMBL CB649269 [ TCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAG GCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGACAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTC ]
[+] EMBL CF304803 [ ATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAA ]
[+] EMBL CF304716 [ CTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTC ]
[+] EMBL CF303517 [ CTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACAT ]
[-] EMBL CB649270 [ TGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACA ]
consensusID : consensus_11048#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 473 fasta sequence
[GAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGACCTTACTGTTATGAAAACATTATCTGGCAGTAACAACTGATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU101926 [GAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGACCTTACTGTTATGAAAACATTATCTGGCAGTAACAACTGATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11048#0 ATTGCACACATATCTTCTCGTTCTTAAATCAAGCTGCTGCCTCTCCCTCCTCCTCTTGAC 60
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAG 120
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAA 180
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCT 240
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCA 300
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATG 360
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATG 420
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 TTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGC 480
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 ACGGCGCCACCAGGCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCA 540
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGC 600
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCC 660
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 ACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCT 720
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAA 780
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 ACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACC 840
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCA 900
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGG 960
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGAC 1020
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTC 1080
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGT 1140
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAA 1200
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGA 1260
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 ACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATT 1320
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAG 1380
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCA 1440
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 TGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCA 1500
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 TCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAG 1560
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGC 1620
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCT 1680
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGAT 1740
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCAT 1800
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCG 1860
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTT 1920
consensus_11048#1 ---GAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTT 57
*********************************************************
consensus_11048#0 TCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGT 1980
consensus_11048#1 TCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGT 117
************************************************************
consensus_11048#0 CCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGC 2040
consensus_11048#1 CCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGC 177
************************************************************
consensus_11048#0 AGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACAC 2100
consensus_11048#1 AGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACAC 237
************************************************************
consensus_11048#0 ATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCG 2160
consensus_11048#1 ATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCG 297
************************************************************
consensus_11048#0 AATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAAT 2220
consensus_11048#1 AATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAAT 357
************************************************************
consensus_11048#0 CGTGAGGAAATGCCTAC-AATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAA 2279
consensus_11048#1 CGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGA--CCTTACTGTTATGAAAA 415
******* * * * ** * ** ** **** * * ** **
consensus_11048#0 CATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTC 2339
consensus_11048#1 CATTATCTGGCAGTAACAACTGATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- 473
*** * * * * **** ** * * * * *
consensus_11048#0 TCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTG 2399
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGAT 2459
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGA 2519
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTA 2579
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGAT 2639
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGA 2699
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 ACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGA 2759
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 ACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCA 2819
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGAT 2879
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGA 2939
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 TGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTT 2999
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAA 3059
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 AGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATA 3119
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 GGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGG 3179
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACA 3239
consensus_11048#1 ------------------------------------------------------------
consensus_11048#0 CTGAGATCTTGCCAACCAAAAAAAAAAATATCCAAAGATTCCCTCGAAGATG 3291
consensus_11048#1 ----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||