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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11075#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2986 fasta sequence
[GAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGCCACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCCTCGAGTTCTCGATGAAACTGACCTGCCTGGACACCGGAGTCGATGGAGGCTACTACACGCCGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACCTCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATGCGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCAAAGCAGGCCACATAGACGCCGTGCTTGTGTCATCCGCTACGGGGCTGCTTGGCCTCCCGTTCCTCACGCGATTCCCCGGATTTGCGAACACCAAGGTCTATGTGACAGAGGTAGCTGCTAGGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTTATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCATGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGGTGTCACTTTACAGGTCCACTAAAGAGTTTATATTAGAAGATAGTGCTTAATTTCACCTAGCTTATATTGGCTATTGGTCCAGAACGTTGAACTTACATTCTTACTAGAGACAAACTTAAAAACTTTTATGAATATTTAATACACAAAAAAAATGTACTTGAATAATTGAATTTTGTCAAGATTTGACTTTCAAATGCTAATAAGAATCTGATAAGATAATTACTGTTTACACCCTAGTTAGTTTCAGTATCAGTCCAGTGCGTTATATCAATGATGGTTTTATTACTTGAGCAAAGAAAGATTCAGATACTGCCACATGTCTGCGGCCTATCATCTTATTGTGTTACTTGTGTAACTGGTTAAGAGTTATTTGCTTCCTGCAAACAAATTTCTGCACTTGGGACATATGGTGGTCATTAAATTTTATGACTGGAAGATTTGTAAGCAGTTCATGGAAGTGAGTTACCATTTTTTTTCTCAACTAATGGGATTTATATCTATCTGGTGCAGTCTGGATAATATAGAAGAATGCATGCAAAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAAAGCCTCTAGTTCTGGTCTCGAACTTGGCAATTGTGTTTGGACAATAAAAGGTCCAAGAGCAAGTATGACCTACTTGCCGAGCTCCATATTTGTGTCAGCTCATGCATTAGACTTTGATTATAGCTCTCTGAAGGGAAATGATGTGATATTGTTTTCGGATTTTTCTTCCTTAAATGGCATGTATGATGATAACAAGAAGATGGGTGAGCATATAGTGGATGAAACTGACATTCTCCTTGCTAGTAATTCAGTGTTCAGGGATGATGGCATGGATGAAGATGAAACCATCAAATTCCTGTGCAGCAATGATGATATTGCAGAGGAGATAGAGAGAATCAGCTTCATATGCTCATGCATCATTGATGCAATAAATTCTGGTGGTTCTGTATTAATACCAATAGGACGAATTGGTATTATTCTTTTGCTTTTGGAACATATGTCAGAAACACTACATTCTTCCAACATGAAGGATATGCCATTTGGATTTGCTTATGTGGATGTGTCAAGTTGAGAGTGCCTGATTTACTGCTAACTACGTGTAAGATGGTTAGCTTCTAGGAGGGTTTAAATATGCATGTGATACGAAGTGTCCTATACCTGTAGTAACAAGTTATTTTTCATATCGGTAGTTCTATGCCCCTTCTTTTAATTCTACTATGAAATTTGAAGTTTATGCCACATCGCTATTCACATCTGTTTTTGGATGACAATTTTTTTCAGAGTCAGGTTCCCATATTTATGATTTCTGAGACAGCAGAAGAAATAATTACTTTTACCAATGCCTTGCCTGAATGGCTATGCAAGTCACGCCAAGAGAAGCTTTTCTCTTGTGAGCCGTTATTCGGCCATGTAGAGCTTTTGAAGGAAGGCAAACTATCACTGTTCTCTCATTTATACTCAAAGGGCCTGCT-----CTTGGAAGGAACCTTGCATTGTATTTTGTCCACATTGGAGTCTTAGGCATGGCCCAGCTGTCCATTTGCTTCATCGATGGCGTGCAGACAAACGATGTCTTCTTGTTTTGGAGCAAGGAGTTGATGCTGAGTTGACTCTAAAACCTTTCATGCCTCTGGCGATCCAGGTCCTTGGGTGTTCTTTCCTTTCTGGAATAAAGGTGGGGAAAATTGATCCATTACTGGGATTGCTGAAACCAAAGCTCATACTGTTTCCTGAAGGTCAGAAGTCGTTGTGTCCAGCCACAGATAAGCAACCATGGTCATTCCTGTATTACTCAAAGGGGAAAACAATCGAGGTCCCAAATATGCGGGAAGAATTCGAGGTGCGCATGACAACTGAGGTTGCCTTTGGGTTGCAACCTAGGCAGCTGGACAAGACCACAGCTGTTGCGAGGTTGAAAGCAAAGCTCCTTCTAAGCAATGGACAATATGTGCTAGCTGCTGCAAAGAGTGAATTAGATCGATCAGAGCGGCACTTGCTACACTGGGGAACTGTGGACGCGAGCTGTATACCGTCAGCCTTGCAGGAAAAGGGAATTGTATGCTCGTTTTCTGCAGACGCTGATTACTCTGCACCTTCAGATCGTGAACGTGTAATTTCGATCACTAGTCCAGGAGAAGCCCTGGTGAAGGTGACATCTGAAAGGACTACTATTTACTGTGATGATGAAGAAACAGCAGAGCGTGTTTATGATGCTCTTCGTAGTATTTGTAATGGGATATGATGTATATATACGATTTCACTCAAGAAAATGACGTGCCTTCGTTTTTGCTGTCGAAGGTTAA]
[+] EMBL AK065972 [GAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGCCACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCCTCGAGTTCTCGATGAAACTGACCTGCCTGGACACCGGAGTCGATGGAGGCTACTACACGCCGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACCTCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATGCGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCAAAGCAGGCCACATAGACGCCGTGCTTGTGTCATCCGCTACGGGGCTGCTTGGCCTCCCGTTCCTCACGCGATTCCCCGGATTTGCGAACACCAAGGTCTATGTGACAGAGGTAGCTGCTAGGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTTATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCATGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGGTGTCACTTTACAGGTCCACTAAAGAGTTTATATTAGAAGATAGTGCTTAATTTCACCTAGCTTATATTGGCTATTGGTCCAGAACGTTGAACTTACATTCTTACTAGAGACAAACTTAAAAACTTTTATGAATATTTAATACACAAAAAAAATGTACTTGAATAATTGAATTTTGTCAAGATTTGACTTTCAAATGCTAATAAGAATCTGATAAGATAATTACTGTTTACACCCTAGTTAGTTTCAGTATCAGTCCAGTGCGTTATATCAATGATGGTTTTATTACTTGAGCAAAGAAAGATTCAGATACTGCCACATGTCTGCGGCCTATCATCTTATTGTGTTACTTGTGTAACTGGTTAAGAGTTATTTGCTTCCTGCAAACAAATTTCTGCACTTGGGACATATGGTGGTCATTAAATTTTATGACTGGAAGATTTGTAAGCAGTTCATGGAAGTGAGTTACCATTTTTTTTCTCAACTAATGGGATTTATATCTATCTGGTGCAGTCTGGATAATATAGAAGAATGCATGCAAAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAAAGCCTCTAGTTCTGGTCTCGAACTTGGCAATTGTGTTTGGACAATAAAAGGTCCAAGAGCAAGTATGACCTACTTGCCGAGCTCCATATTTGTGTCAGCTCATGCATTAGACTTTGATTATAGCTCTCTGAAGGGAAATGATGTGATATTGTTTTCGGATTTTTCTTCCTTAAATGGCATGTATGATGATAACAAGAAGATGGGTGAGCATATAGTGGATGAAACTGACATTCTCCTTGCTAGTAATTCAGTGTTCAGGGATGATGGCATGGATGAAGATGAAACCATCAAATTCCTGTGCAGCAATGATGATATTGCAGAGGAGATAGAGAGAATCAGCTTCATATGCTCATGCATCATTGATGCAATAAATTCTGGTGGTTCTGTATTAATACCAATAGGACGAATTGGTATTATTCTTTTGCTTTTGGAACATATGTCAGAAACACTACATTCTTCCAACATGAAGGATATGCCATTTGGATTTGCTTATGTGGATGTGTCAAGTTGAGAGTGCCTGATTTACTGCTAACTACGTGTAAGATGGTTAGCTTCTAGGAGGGTTTAAATATGCATGTGATACGAAGTGTCCTATACCTGTAGTAACAAGTTATTTTTCATATCGGTAGTTCTATGCCCCTTCTTTTAATTCTACTATGAAATTTGAAGTTTATGCCACATCGCTATTCACATCTGTTTTTGGATGACAATTTTTTTCAGAGTCAGGTTCCCATATTTATGATTTCTGAGACAGCAGAAGAAATAATTACTTTTACCAATGCCTTGCCTGAATGGCTATGCAAGTCACGCCAAGAGAAGCTTTTCTCTTGTGAGCCGTTATTCGGCCATGTAGAGCTTTTGAAGGAAGGCAAACTATCACTGTTCTCTCATTTATACTCAAAGGGCCTGCT CTTGGAAGGAACCTTGCATTGTATTTTGTCCACATTGGAGTCTTAGGCATGGCCCAGCTGTCCATTTGCTTCATCGATGGCGTGCAGACAAACGATGTCTTCTTGTTTTGGAGCAAGGAGTTGATGCTGAGTTGACTCTAAAACCTTTCATGCCTCTGGCGATCCAGGTCCTTGGGTGTTCTTTCCTTTCTGGAATAAAGGTGGGGAAAATTGATCCATTACTGGGATTGCTGAAACCAAAGCTCATACTGTTTCCTGAAGGTCAGAAGTCGTTGTGTCCAGCCACAGATAAGCAACCATGGTCATTCCTGTATTACTCAAAGGGGAAAACAATCGAGGTCCCAAATATGCGGGAAGAATTCGAGGTGCGCATGACAACTGAGGTTGCCTTTGGGTTGCAACCTAGGCAGCTGGACAAGACCACAGCTGTTGCGAGGTTGAAAGCAAAGCTCCTTCTAAGCAATGGACAATATGTGCTAGCTGCTGCAAAGAGTGAATTAGATCGATCAGAGCGGCACTTGCTACACTGGGGAACTGTGGACGCGAGCTGTATACCGTCAGCCTTGCAGGAAAAGGGAATTGTATGCTCGTTTTCTGCAGACGCTGATTACTCTGCACCTTCAGATCGTGAACGTGTAATTTCGATCACTAGTCCAGGAGAAGCCCTGGTGAAGGTGACATCTGAAAGGACTACTATTTACTGTGATGATGAAGAAACAGCAGAGCGTGTTTATGATGCTCTTCGTAGTATTTGTAATGGGATATGATGTATATATACGATTTCACTCAAGAAAATGACGTGCCTTCGTTTTTGCTGTCGAAGGTT ]
[-] EMBL CB657433 [ GCAAACTATCACTGTTCTCTCATTTATACTCAAAGGGCCTGCTGGCAGCTTGGAAGGAACCTTGCATTGTATTTTGTCCACATTGGAGTCTTAGGCATGGCCCAGCTGTCCATTTGCTTCATCGATGGCGTGCAGACAAACGATGTCTTCTTGTTTTGGAGCAAGGAGTTGATGCTGAGTTGACTCTAAAACCTTTCATGCCTCTGGCGATCCAGGTCCTTGGGTGTTCTTTCCTTTCTGGAATAAAGGTGGGGAAAATTGATCCATTACTGGGATTGCTGAAACCAAAGCTCATACTGTTTCCTGAAGGTCAGAAGTCGTTGTGTCCAGCCACAGATAAGCAACCATGGTCATTCCTGTATTACTCAAAGGGGAAAACAATCGAGGTCCCAAATATGCGGGAAGAATTCGAGGTGCGCATGACAACTGAGGTTGCCTTTGGGTTGCAACCTAGGCAGCTGGACAAGACCACAGCTGTTGCGAGGTTGAAAGCAAAGCTCCTTCTAAGCAATGGACAATATGTGCTAGCTGCTGCAAAGAGTGAATTAGATCGATCAGAGCGGCACTTGCTACACTGGGGAACTGTGGACGCGAGCTGTATACCGTCAGCCTTGCAGGAAAAGGGAATTGTATGCTCGTTTTCTGCAGACGCTGATTACTCTGCACCTTCAGATCGTGAACGTGTAATTTCGATCACTAGTCCAGGAGAAGCCCTGGTGAAGGTGACATCTGAAAGGACTACTATTTACTGTGATGATGAAGAAACAGCAGAGCGTGTTTATGATGCTCTTCGTAGTATTTGTAATGGGATATGATGTATATATACGATTTCACTCAAG ]
[-] EMBL CB657043 [ CATTGTATTTTGTCCACATTGGAGTCTTAGGCATGGCCCAGCTGTCCATTTGCTTCATCGATGGCGTGCAGACAAACGATGTCTTCTTGTTTTGGAGCAAGGAGTTGATGCTGAGTTGACTCTAAAACCTTTCATGCCTCTGGCGATCCAGGTCCTTGGGTGTTCTTTCCTTTCTGGAATAAAGGTGGGGAAAATTGATCCATTACTGGGATTGCTGAAACCAAAGCTCATACTGTTTCCTGAAGGTCAGAAGTCGTTGTGTCCAGCCACAGATAAGCAACCATGGTCATTCCTGTATTACTCAAAGGGGAAAACAATCGAGGTCCCAAATATGCGGGAAGAATTCGAGGTGCGCATGACAACTGAGGTTGCCTTTGGGTTGCAACCTAGGCAGCTGGACAAGACCACAGCTGTTGCGAGGTTGAAAGCAAAGCTCCTTCTAAGCAATGGACAATATGTGCTAGCTGCTGCAAAGAGTGAATTAGATCGATCAGAGCGGCACTTGCTACACTGGGGAACTGTGGACGCGAGCTGTATACCGTCAGCCTTGCAGGAAAAGGGAATTGTATGCTCGTTTTCTGCAGACGCTGATTACTCTGCACCTTCAGATCGTGAACGTGTAATTTCGATCACTAGTCCAGGAGAAGCCCTGGTGAAGGTGACATCTGAAAGGACTACTATTTACTGTGATGATGAAGAAACAGCAGAGCGTGTTTATGATGCTCTTCGTAGTATTTGTAATGGGATATGATGTATATATACGATT ]
[+] EMBL AU068464 [ CGTGAACGTGTAATTNCGATCNCTAGTCCAGGAGAAGCCCTGGTGAAGGTGACATCTGAAAGGACTACTATTTACTGTGATGATGAAGAAACAGCAGAGCGTGTTTANGATGCTCTTCGTAGTATTTGTAATGGGATATGATGTATATATACGATTTCACTCAAGAAAATGACGTGCCTTCGTTTTTGCTGTCGAAaaaaaa]
consensusID : consensus_11075#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1218 fasta sequence
[CAGCACCCACGAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGCCACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCCTCGAGTTCTC-GATGAAACTGACCTGCCTGGACACCG-GAGTCGATGGAGGCTACTACACGCCGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACCTCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATGCGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCAAAGCAGGCCACAT-AGACGCCGTGCTTGTGTCATCCGCTACGGGGCTG-CTTGGCCTCCCGTTCCTCACGCGATT-CCCCGGA-TTTGCGAACACCAAGG-TCTATG-TGACAGAGGTAGCTGCTAGGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTTATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCATGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGGTGTCACTTTACAGTCTGGATAATATAGAAGAATGCATGCAAAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAAAGCCTCTAGTTCTGGTCTCGAACTTGGCAATTGTGTTTGGACAATAAAAGGTCCAAGAGCAAAAGATGGGTGAGCATATAGTGGATGAAACTGACATTCTCCTTGCTAGTAATTCAGTGTTCAGGGATGATGGCATGGATGAAGATGAAACCATCAAATTCCTGTGCAGCAATGATGATATTGCAGAGGAGATAGAGAGAATCAGCTTCATATGCTCATGCATCATTGATGCAATAAATTCTGGTGGTTCTGTATTAATACCAATAGGACGAATTGGTATTATTCTTTTGCTTTTGGAACATATGTCAGAAACACTACATTCTTCCAACATGAAGAGTCAGGTTCCCATATTTATGATTTCTGAGACAGCAGANNNNNTAATTACTTTTACCAATGCCTTGCCTGAATGGCTATGCAAGTCACGCCAAGNNNNNCNNNTCTCTTGTGAGNCGTNATTC]
[+] EMBL CB657042 [CAGCACCCACGAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGCCACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCCTCGAGTTCTC GATGAAACTGACCTGCCTGGACACCG GAGTCGATGGAGGCTACTACACGCCGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACCTCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATGCGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCAAAGCAGGCCACAT AGACGCCGTGCTTGTGTCATCCGCTACGGGGCTG CTTGGCCTCCCGTTCCTCACGCGATT CCCCGGA TTTGCGAACACCAAGG TCTATG TGACAGAGGTAGCTGCTAGGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTTATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCATGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGGTGTCACTTTACAGTCTGGATAATATAGAAGAATGCATGCAAAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAAAGCCTCTAGTTCTGGTCTCGAACTTGGCA ]
[+] EMBL CB657432 [CAGCACCCACGAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGCCACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCCTCGAGTTCTC GATGAAACTGACCTGCCTGGACACCG GAGTCGATGGAGGCTACTACACGCCGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACCTCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATGCGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCAAAGCAGGCCACAT AGACGCCGTGCTTGTGTCATCCGCTACGGGGCTG CTTGGCCTCCCGTTCCTCACGCGATT CCCCGGA TTTGCGAACACCAAGG TCTATG TGACAGAGGTAGCTGCTAGGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTTATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCATGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGGTGTCACTTTACAGTCTGGATAATATAGAAGAATGCATGCAAAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAAAGCCTCTAGTTCTGGTCTCG ]
[+] EMBL AU166598 [ TCTNTNCGAGCCGCCGNCACCCCCTCCCNACCTNCAAACCTCATCCNCCGTGTTTCCTNGAGTTCTCAGATGAAACTGACCTGCCTGGACACCGNGAGTCGATGGAGGCTACTACACGCCGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGNCCCATCGACCTCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGAGCATCGTCCTCCTCCGGTGATGCGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCAAAGCAGGCCACATAAGACGCCGTGCTTGTGTCATCCGCTACGGGGCTGNCTTGGCCTCCCGTTCCTCACGCGATTCCCCCGGATTTTGCGAACACCAAGGNTCTATGTTGACAGANGTAGC ]
[+] EMBL CF196893 [ GAAGAATGCATGCAAAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAAAGCCTCTAGTTCTGGTCTCGAACTTGGCAATTGTGTTTGGACAATAAAAGGTCCAAGAGCAAAAGATGGGTGAGCATATAGTGGATGAAACTGACATTCTCCTTGCTAGTAATTCAGTGTTCAGGGATGATGGCATGGATGAAGATGAAACCATCAAATTCCTGTGCAGCAATGATGATATTGCAGAGGAGATAGAGAGAATCAGCTTCATATGCTCATGCATCATTGATGCAATAAATTCTGGTGGTTCTGTATTAATACCAATAGGACGAATTGGTATTATTCTTTTGCTTTTGGAACATATGTCAGAAACACTACATTCTTCCAACATGAAGAGTCAGGTTCCCATATTTATGATTTCTGAGACAGCAGANNNNNTAATTACTTTTACCAATGCCTTGCCTGAATGGCTATGCAAGTCACGCCAAGNNNNNCNNNTCTCTTGTGAGNCGTNATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11075#0 ----------GAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGC 50
consensus_11075#1 CAGCACCCACGAACCGCTGTGTCCTCCCCTCTCGCACTCTCGCTCCCAGGGCGGCGCCGC 60
**************************************************
consensus_11075#0 CACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCC 110
consensus_11075#1 CACTCTCTCCGAGCCGCCGCCACCCCCTCCCCACCTCCCAACCTCATCCCCCGTGTCTCC 120
************************************************************
consensus_11075#0 TCGAGTTCTCGATGAAACTGACCTGCCTGGACACCGGAGTCGATGGAGGCTACTACACGC 170
consensus_11075#1 TCGAGTTCTCGATGAAACTGACCTGCCTGGACACCGGAGTCGATGGAGGCTACTACACGC 180
************************************************************
consensus_11075#0 CGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACC 230
consensus_11075#1 CGGCGAGTCATCTCCTGGAGGTGGAGGGGCTCCGTATTCTCCTTGACTGCCCCATCGACC 240
************************************************************
consensus_11075#0 TCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATG 290
consensus_11075#1 TCTCCGCTCTCACGGCGTTCTCCGCGGTGCCCCTCGGCGCATCGTCCTCCTCCGGTGATG 300
************************************************************
consensus_11075#0 CGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCA 350
consensus_11075#1 CGGAGGACCTAATCCGCGGTGTGCCCTACTACCGGTCGCCTACCGCGGTTGCGGCCGCCA 360
************************************************************
consensus_11075#0 AAGCAGGCCACATAGACGCCGTGCTTGTGTCATCCGCTACGGGGCTGCTTGGCCTCCCGT 410
consensus_11075#1 AAGCAGGCCACATAGACGCCGTGCTTGTGTCATCCGCTACGGGGCTGCTTGGCCTCCCGT 420
************************************************************
consensus_11075#0 TCCTCACGCGATTCCCCGGATTTGCGAACACCAAGGTCTATGTGACAGAGGTAGCTGCTA 470
consensus_11075#1 TCCTCACGCGATTCCCCGGATTTGCGAACACCAAGGTCTATGTGACAGAGGTAGCTGCTA 480
************************************************************
consensus_11075#0 GGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTT 530
consensus_11075#1 GGATGGGAAGTCTAATGATGAGAGAGTTGGTAGAGATGCACCGTGAGTTTGTAAGGTGTT 540
************************************************************
consensus_11075#0 ATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCA 590
consensus_11075#1 ATGGACCAGATAGGGATCAGTCACCAGTGTGGATGGAAGGGGAGAAGCTCAAGAAACTCA 600
************************************************************
consensus_11075#0 TGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGG 650
consensus_11075#1 TGTCAGTGTTGCAGAAGATCACGACTGAAGACGAGGAAAATAATAATTTAGCTGCTTTGG 660
************************************************************
consensus_11075#0 TGTCACTTTACAGGTCCACTAAAGAGTTTATATTAGAAGATAGTGCTTAATTTCACCTAG 710
consensus_11075#1 TGTCACTTTACAGTCTGGATAA------TATAGAAGAATGCA-TGCAAAAA---ACCCAG 710
************* *** **** **** * *** ** *** **
consensus_11075#0 CTTATATTGGCTATTGGTCCAGAACGTTGAACTTACATTCTTACTAGAGACAAACTTAAA 770
consensus_11075#1 --TATGTAAAATATGGAG--AGGAGGTTTGCTTCAATGGCATGTTGATG------CTGAA 760
*** * *** * ** * *** * * * * * * * **
consensus_11075#0 AACTTTTATGAATATTTAATACACAAAAAAAATGTACTTGAATAATTGAATTTTGTCAAG 830
consensus_11075#1 AGCCTCTAGTTCTGGTCT-CGAACTTGGCAATTGTGTTTGGACAATAAAAGGTC--CAAG 817
* * * ** * * ** ** *** *** * *** ** * ****
consensus_11075#0 ATTTGACTTTCAAATGCTAATAAGAATCTGATAAGATAATTACTGTTTACACCCTAGTTA 890
consensus_11075#1 AGCAAA-----AGATG--GGTGAGCATATAGTGGATGAA--ACTGACATTCTCCTTGCTA 868
* * * *** * ** ** * * ** **** *** * **
consensus_11075#0 GT--TTCAGTATCAGTCCAGTGCGTTATAT-CAATGATGGTTTTATTACTTGAGCAAAGA 947
consensus_11075#1 GTAATTCAGTGTTCAGGGATGATGGCATGGATGAAGATGAAACCATCAAATTCCTGTGCA 928
** ****** * * * ** * **** ** * * *
consensus_11075#0 AAGATTCAGATACTGCCACATGTCTGCGGCCTATCATCTTATTGTGTTACTTGTGTAACT 1007
consensus_11075#1 GCAATGATGATATTGCAGAGGAGATAGAGAGAATCAGCTTCATATGCT-CATGCATCATT 987
** **** *** * * **** *** * ** * * ** * * *
consensus_11075#0 GGTTAAGAGTTATTTGCTTCCTGCAAACAAATTTCTGCACTTGGGACATATGGTGGTCAT 1067
consensus_11075#1 GATGCAATAAATTCTGGTGGTTCTGTATTAATACCAA----TAGGACGAATTGGTATTAT 1043
* * * * ** * * * *** * * **** ** * * **
consensus_11075#0 TAAATTTTATGACTGGAAGATTTGTAAGCAGTTCATGGAAGTGAGTTACCATTTTTTTTC 1127
consensus_11075#1 TC--TTTTGCTTTTGGAACATATGTCAGAAACAC------------TACATTCTTCCAAC 1089
* **** ***** ** *** ** * * *** * ** *
consensus_11075#0 TCAACTAATGGGATTTATATCTATCTGGTGCAGTCTGGATAATATAGAAGAATGCATGCA 1187
consensus_11075#1 ATGAAGAGTCAGGTTCCCATATTTATGATTTCTGAGACAGCAGANNNNNTAATTACTTTT 1149
* * * * ** ** * * ** * * * * *** *
consensus_11075#0 AAAAACCCAGTATGTAAAATATGGAGAGGAGGTTTGCTTCAATGGCATGTTGATGCTGAA 1247
consensus_11075#1 ACCAATGCCTTGCCTGAA---TGGCTATGCAAGTCACGCCAAGNNNNNCNNNTCTCTTGT 1206
* ** * * * ** *** * * * * *** **
consensus_11075#0 AGCCTCTAGTTCTGGTCTCGAACTTGGCAATTGTGTTTGGACAATAAAAGGTCCAAGAGC 1307
consensus_11075#1 GAGNCGTNATTC------------------------------------------------ 1218
* ***
consensus_11075#0 AAGTATGACCTACTTGCCGAGCTCCATATTTGTGTCAGCTCATGCATTAGACTTTGATTA 1367
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TAGCTCTCTGAAGGGAAATGATGTGATATTGTTTTCGGATTTTTCTTCCTTAAATGGCAT 1427
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GTATGATGATAACAAGAAGATGGGTGAGCATATAGTGGATGAAACTGACATTCTCCTTGC 1487
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TAGTAATTCAGTGTTCAGGGATGATGGCATGGATGAAGATGAAACCATCAAATTCCTGTG 1547
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 CAGCAATGATGATATTGCAGAGGAGATAGAGAGAATCAGCTTCATATGCTCATGCATCAT 1607
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TGATGCAATAAATTCTGGTGGTTCTGTATTAATACCAATAGGACGAATTGGTATTATTCT 1667
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TTTGCTTTTGGAACATATGTCAGAAACACTACATTCTTCCAACATGAAGGATATGCCATT 1727
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TGGATTTGCTTATGTGGATGTGTCAAGTTGAGAGTGCCTGATTTACTGCTAACTACGTGT 1787
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 AAGATGGTTAGCTTCTAGGAGGGTTTAAATATGCATGTGATACGAAGTGTCCTATACCTG 1847
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TAGTAACAAGTTATTTTTCATATCGGTAGTTCTATGCCCCTTCTTTTAATTCTACTATGA 1907
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 AATTTGAAGTTTATGCCACATCGCTATTCACATCTGTTTTTGGATGACAATTTTTTTCAG 1967
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 AGTCAGGTTCCCATATTTATGATTTCTGAGACAGCAGAAGAAATAATTACTTTTACCAAT 2027
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GCCTTGCCTGAATGGCTATGCAAGTCACGCCAAGAGAAGCTTTTCTCTTGTGAGCCGTTA 2087
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TTCGGCCATGTAGAGCTTTTGAAGGAAGGCAAACTATCACTGTTCTCTCATTTATACTCA 2147
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 AAGGGCCTGCTCTTGGAAGGAACCTTGCATTGTATTTTGTCCACATTGGAGTCTTAGGCA 2207
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TGGCCCAGCTGTCCATTTGCTTCATCGATGGCGTGCAGACAAACGATGTCTTCTTGTTTT 2267
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GGAGCAAGGAGTTGATGCTGAGTTGACTCTAAAACCTTTCATGCCTCTGGCGATCCAGGT 2327
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 CCTTGGGTGTTCTTTCCTTTCTGGAATAAAGGTGGGGAAAATTGATCCATTACTGGGATT 2387
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GCTGAAACCAAAGCTCATACTGTTTCCTGAAGGTCAGAAGTCGTTGTGTCCAGCCACAGA 2447
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TAAGCAACCATGGTCATTCCTGTATTACTCAAAGGGGAAAACAATCGAGGTCCCAAATAT 2507
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GCGGGAAGAATTCGAGGTGCGCATGACAACTGAGGTTGCCTTTGGGTTGCAACCTAGGCA 2567
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GCTGGACAAGACCACAGCTGTTGCGAGGTTGAAAGCAAAGCTCCTTCTAAGCAATGGACA 2627
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 ATATGTGCTAGCTGCTGCAAAGAGTGAATTAGATCGATCAGAGCGGCACTTGCTACACTG 2687
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GGGAACTGTGGACGCGAGCTGTATACCGTCAGCCTTGCAGGAAAAGGGAATTGTATGCTC 2747
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 GTTTTCTGCAGACGCTGATTACTCTGCACCTTCAGATCGTGAACGTGTAATTTCGATCAC 2807
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TAGTCCAGGAGAAGCCCTGGTGAAGGTGACATCTGAAAGGACTACTATTTACTGTGATGA 2867
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TGAAGAAACAGCAGAGCGTGTTTATGATGCTCTTCGTAGTATTTGTAATGGGATATGATG 2927
consensus_11075#1 ------------------------------------------------------------
consensus_11075#0 TATATATACGATTTCACTCAAGAAAATGACGTGCCTTCGTTTTTGCTGTCGAAGGTTAA 2986
consensus_11075#1 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||