cluster # 11088

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11088 cluster # 11088 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11088#0 length = 1401 sequences # 4

consensus_11088#1 length = 1324 sequences # 3
consensus_11088#2 length = 382 sequences # 1

consensusID : consensus_11088#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1401
fasta sequence

                              [GTCTCCTCGCCCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGATGTATCGTGGTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAGCATTGAAGGGGCCAAAAAAAAAAAA]

[+] EMBL AK102421             [GTCTCCTCGCCCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGATGTATCGTGGTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAGCAT                      ]
[+] EMBL AK061364             [     CTCGCCCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGATGTATCG                                                                                       ]
[+] EMBL AU166415             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCATGGTGACACACTTGCTGGTAAGGGTGGANAGCCTNCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTAAAAAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGAaaaaaa                                                                                        ]
[+] EMBL CB000994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGATGTATCGTGGTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAGCATTGAAGGGGCCAAAAAAAAAAAA]




>consensus_11088#0
GTCTCCTCGCCCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCTCCTCCTCC
TTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCG
AGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGACACCTCCA
TCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTTCTTCGACG
CCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCGCCC
TCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTTCGCCGACA
TCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCTCCCCCACG
TCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCC
ACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGG
TCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCC
TCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCC
ATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGG
GGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACA
AGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTTG
GGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCTGGTGAGGG
TGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGG
CAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCT
GGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCT
TCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTG
GAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATG
TAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGA
ACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGATGTATCGTGGTTG
ATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAGCATT
GAAGGGGCCAAAAAAAAAAAA

consensusID : consensus_11088#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1324
fasta sequence

                              [TTCCTCGAGCACTGTTGGCCTACTGGCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTAAAAAAAAAAAAAAAAGGCCACATG]

[+] EMBL AK109347             [TTCCTCGAGCACTGTTGGCCTACTGGCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTAAAAAAAAAAAAAAAAGGCCACATG]
[+] EMBL C26311               [                                         CCCATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTNACGCTCCTCGTCGCCGCCGG GCCGCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTNATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTNTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGAGTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU225616             [                                                                                                                                                                                                                                                                                                                                                                                                                                              gccgcTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTACTTCTACCAGGGCTCTGGGATGCAGCTCGGCGCCGAGGGTTTTGCGGTGGGGTTCTTGTACACTCTCGTGGGGCTCATGATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_11088#1
TTCCTCGAGCACTGTTGGCCTACTGGCAGATCCGCCAATCGCCCATGGAGTCCCCACCCC
ACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCG
ATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACC
TCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGC
TCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCC
GCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACC
TCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCA
ACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGC
AGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCC
GCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGA
TCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACG
GGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCT
TCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACC
GGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCG
AGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACAC
ACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGA
TAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATA
GCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATAT
GGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAG
ATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCT
GTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGC
ACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTAAAAAAAAAAAAAAAAGGCCA
CATG

consensusID : consensus_11088#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 382
fasta sequence

                              [GTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAGCATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAACCCGTGGGTTCCCCCTTAAAAGGAATTTTTTAAAAAAAGGGGGAAATTCGGGGCCCAAAAAAAAAATTGCCAAAAAAGGGGGGGAAAAAAAAAAAAAGGGGGGGGGGTAAAAAAAACTTAGGAAGGGAAAAACCCTGGGGAAAACCAAAAAAAAGACCGGGAAAAAAAACCCCTTTTCACCCTTGGGGGAAAAAAAAAAAAG]

[+] EMBL CF334162             [GTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAGCATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAACCCGTGGGTTCCCCCTTAAAAGGAATTTTTTAAAAAAAGGGGGAAATTCGGGGCCCAAAAAAAAAATTGCCAAAAAAGGGGGGGAAAAAAAAAAAAAGGGGGGGGGGTAAAAAAAACTTAGGAAGGGAAAAACCCTGGGGAAAACCAAAAAAAAGACCGGGAAAAAAAACCCCTTTTCACCCTTGGGGGAAAAAAAAAAAAG]




>consensus_11088#2
GTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCATTAG
CATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAA
CCCGTGGGTTCCCCCTTAAAAGGAATTTTTTAAAAAAAGGGGGAAATTCGGGGCCCAAAA
AAAAAATTGCCAAAAAAGGGGGGGAAAAAAAAAAAAAGGGGGGGGGGTAAAAAAAACTTA
GGAAGGGAAAAACCCTGGGGAAAACCAAAAAAAAGACCGGGAAAAAAAACCCCTTTTCAC
CCTTGGGGGAAAAAAAAAAAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11088#0      -----------------GTCTCCTCGCCCAGATCCGCCAATCGCCCATGGAGTCCCCACC 43
consensus_11088#1      TTCCTCGAGCACTGTTGGCCTACTGGC--AGATCCGCCAATCGCCCATGGAGTCCCCACC 58
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGC 103
consensus_11088#1      CCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGC 118
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCA 163
consensus_11088#1      CGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCA 178
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGT 223
consensus_11088#1      CCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGT 238
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      GCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCT 283
consensus_11088#1      GCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCT 298
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGA 343
consensus_11088#1      CCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGA 358
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGT 403
consensus_11088#1      CCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGT 418
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGA 463
consensus_11088#1      CAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGA 478
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      GCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTC 523
consensus_11088#1      GCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTC 538
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGAT 583
consensus_11088#1      CCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGAT 598
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      GATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGA 643
consensus_11088#1      GATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGA 658
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTT 703
consensus_11088#1      CGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTT 718
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGA 763
consensus_11088#1      CTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGA 778
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGC 823
consensus_11088#1      CCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGC 838
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      CGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGAC 883
consensus_11088#1      CGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGAC 898
consensus_11088#2      ------------------------------------------------------GTTGAT 6
                                                                             * *** 

consensus_11088#0      ACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCAT 943
consensus_11088#1      ACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCAT 958
consensus_11088#2      GTAGCTTGTCAGGTGCATTGTCATTTTGGAAA---ATTGCTTAATGGAAATCATTAGCAT 63
                         *  *  *   * *  * *  *   ** * *   *  * ** * *    *      ***

consensus_11088#0      GATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATA 1003
consensus_11088#1      GATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATA 1018
consensus_11088#2      TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAAAAAAAAAAAAAAAAAAAA 119
                          **             *   ** **    *         * **    ** *    * *

consensus_11088#0      TAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGAT 1063
consensus_11088#1      TAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGAT 1078
consensus_11088#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA 179
                        *  *   * *           *  *     *   ***     * * **    * *  * 

consensus_11088#0      ATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTG 1123
consensus_11088#1      ATGGATGGTTTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTG 1138
consensus_11088#2      ACCCGTGGGTTCCCCCTTAAAAGGAATTTTTTAAAAAAAGGGGGAAATTCG---GGGCCC 236
                       *    *** ***  ****            ***   **      ** ** *   * **  

consensus_11088#0      AGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATG 1183
consensus_11088#1      AGATAGAGCATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATG 1198
consensus_11088#2      AAAAAAAAAATTGCCAAAAAAGGGGGGGAAAAAAAAAAAAAGGGGGGGGGGTAAAAAAAA 296
                       * * * *  **       *  *  ***       **    *     *    *     *  

consensus_11088#0      CTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATT 1243
consensus_11088#1      CTGTAGTATGAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATT 1258
consensus_11088#2      CTTAGGAAGGGAAAAACCCTGGGGAAAACCAAAAAAAAGACCGGGAAAAAAAACCCCTTT 356
                       **   * * * ** *          **  **    *   *    **  **  *   * **

consensus_11088#0      GCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGA 1303
consensus_11088#1      GCACATCTATCACTTGAACAAGAAAGTTTGGCTTTTGAATTAAAAAAAAAA-------AA 1311
consensus_11088#2      TCACCCTTGGGGGAAAAAAAAAAAAG---------------------------------- 382
                        ***   *        ** ** ****                                  

consensus_11088#0      ATGATGTATCGTGGTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAA 1363
consensus_11088#1      AAAAGGCCACATG----------------------------------------------- 1324
consensus_11088#2      ------------------------------------------------------------
                                                                                   

consensus_11088#0      TGGAAATCATTAGCATTGAAGGGGCCAAAAAAAAAAAA 1401
consensus_11088#1      --------------------------------------
consensus_11088#2      --------------------------------------