cluster # 11104

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Oryza sativa
cluster # 11104 cluster # 11104 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11104#0 length = 695 sequences # 8
consensusID : consensus_11104#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 695
fasta sequence
                              [TAGGGAATTGGCCTCGAGCTAGAATCGGCACGAGGGGCACACTAAATTAACTAGGGAAAAATAATCGAACTCCTGAGAACAACGAGGAAAGGAGAAAAAGGAGAAAGAGTAAGTTACTAAGCGCCAAGAAGATCTCCTAGGGATTGGGCAACACCGCAACCCAAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT-ATACAA-ACAAA-TCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC-TCTATATACCATGTGCATTTAAACTTATATACTCTGCGGCAAAATTAATTATACTACTCTACTTTAGGGGTGTTTGCCTTATCAAAAA]

[+] EMBL BU672805             [TAGGGAATTGGCCTCGAGCTAGAATCGGCACGAGGGGCACACTAAATTAACTAGGGAAAAATAATCGAACTCCTGAGAACAACGAGGAAAGGAGAAAAAGGAGAAAGAGTAAGTTACTAAGCGCCAAGAAGATCTCCTAGGGATTGGGCAACACCGCAACCCAAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACAAA TCATTAGGGTTGATTATTCCGATCATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTG                                                                         ]
[+] EMBL BU673856             [                                            AATTAACTAGGGAAAAATAATCGAACTCCTGAGAACAACGAGGAAAGGAGAAAAAGGAGAAAGAGTAAGTTACTAAGCGCCAAGAAGATCTCCTAGGGATTGGGCAACACCGCAACCCAAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACAAA TCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCACTTCTATATAC                                                                               ]
[-] EMBL CB966993             [                                             ATTAACTAGGGAAAAATAATCGAACTCCTGAGAACAACGAGGAAAGGAGAAAAAGGAGAAAGAGTAAGTTACTAAGCGCCAAGAAGATCTCCTAGGGATTGGGCAACACCGCAACCCAAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACNAA TCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTGC                                                                        ]
[-] EMBL CB966227             [                                             ATTAACTAGGGAAAAATAATCGAACTCCTGAGAACAACGAGGAAAGGAGATAAAGGAGAAAGAGTAAGTTACTAAGCGCCAAGAAGATCTCCTAGGGATTGGGCAACACCGCAACCCAAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACAAA TCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGC AAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTGC                                                                        ]
[-] EMBL CB964941             [                                                                              ctatCGAGGAAAGGAGAAAAAGGAGAAAGAGTAAGTTACTAAGCGCCTAGAAGATCTCCTAGGGATTGGGCTACACCGCAACCCTAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACAAA TCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTGC                                                                        ]
[-] EMBL CB966248             [                                                                                                                                  GATCTCCTAGGGATTGGTCAACACCTCAACCCTAAGCTTCTCTTATTGCACGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTTTTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACAAA TCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTGC                                                                        ]
[+] EMBL CA766968             [                                                                                                                                                                                                                                                                 AAGGGGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTACAGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGCCTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAACTTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTCT ATACAA ACAAA TCATTAGTGTTTATTATTCTGATGATCAGACGGGCTAGAACAATTAGCAAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTGCATTTAAACTTATATACTCTGCGGCAAAATTAATTATACTACTCTACTTTAGGGGTGTTTGCCTTATCAAAAA]
[-] EMBL CB966937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATGGTCACCTAGATATCTATTGATTATCTCTAATACAACACAAATTCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACANTTAGCANAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCACTAGCAC TCTATATACCATGTGC                                                                        ]




>consensus_11104#0
TAGGGAATTGGCCTCGAGCTAGAATCGGCACGAGGGGCACACTAAATTAACTAGGGAAAA
ATAATCGAACTCCTGAGAACAACGAGGAAAGGAGAAAAAGGAGAAAGAGTAAGTTACTAA
GCGCCAAGAAGATCTCCTAGGGATTGGGCAACACCGCAACCCAAAGCTTCTCTTATTGCA
CGATGCGATCAACCATCATCTCCGTCGTGGAAATAATCCCCTCGAAGACATGAGCATTTT
TTCTAGCCACAGGTGCCAAGGAGGACGAGGGAGTTGAACCCCTTTCTTGTGTGATCCTAC
AGTTGCTAGCAAGAAGACTCCCACCAAACTGGAAGCAGAGCCTGTTGACAGGGTGATAGC
CTCTTGACAGGGTGATAGGGAGGCTAACCTGGCCCGGTTGAACAGCAACTTGTGCTAAAC
TTGTGGTGCGAAGACACACTGCACCAAGATATGGTCACCTAGATATCTATTGATTATCTC
TATACAAACAAATCATTAGTGTTTATTATTCCGATCATCAGACGGGCTAGAACAATTAGC
AAAAGATAGGATATGTGCATTCTTCTGGTGCATATATATGCTTTCGGGCCTGTAAGATCA
CTAGCACTCTATATACCATGTGCATTTAAACTTATATACTCTGCGGCAAAATTAATTATA
CTACTCTACTTTAGGGGTGTTTGCCTTATCAAAAA
clustalw multiple alignements is not computed in this case