cluster # 11159

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Oryza sativa
cluster # 11159 cluster # 11159 Sequences # 8 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11159#0 length = 1852 sequences # 4
consensus_11159#1 length = 1354 sequences # 1

consensus_11159#2 length = 977 sequences # 1
consensus_11159#3 length = 571 sequences # 1
consensus_11159#4 length = 352 sequences # 1

consensusID : consensus_11159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1852
fasta sequence

                              [CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAGATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAAAAGAAGAAAAAAAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGAAGTTAGAGTTGAGCCAGAGGCAGATCATGAGGAAGACTCCATCATTAACATGTTGGTAGCTGATTTGGAAGCCCATGAGCAAGGAACATGAGCACTTCTGAAAGATCATATGGTTCTAAGGATGGCTACTACAGTGAGGAGGAGGACTCCTTTCTGGACATGTTGGTTGCGGCTTTGAAGGCAAAGCTATGTGTGAGGGCAGCACGTTGGGTATCGCAACAATCTGGAATGGAATGGGTGATGGAGACAATGGAAAACCCATCTCAATGCCAAGCAATTTTCCGTCTGATGCCAGATCAAATCCATGCTCTGTTTGGGTTACTTACTAATCGATACAATCTTCATGGATCAATTGAGGTATGCCCAATGGAAGCACTTGGAATATTTTTGTACATCATGGCGGGGGGCAATTCAAATAGGGCCACTAATAATAGGATGAATGATGAAGAATTCCAGCCATTTGCTGGTGCGGCTGGTGCAGTGGATGGAGCACACATTCATTGCATTGTGGCAGTGGATGATTCCATTCAACACAGGAACCGTCACCACATAACTTCTAGGAATGTTCGTCGCTATTGGATTGGACGACCGTGTCATTTTTGCAGATGTTGGGTGGCTAGGGTCTGTGCATGATCAACCTAACAGAAGCAGTACGGGGCTATCCGTTTGTTTTCCCAAGGCTACCATGGGGGAAATATTTCCTTGTGGACTCGGGATATGCTAGCCGGTATAGATTCCTACCACCTTACCCACATGTTTGGTACCACTTGGATGAATTTGCGGGTAATAAGGGAGCAGCCTTGCCCCATGGAAAGGAAGATACTTTTAACTAAATGCACAGTTCGTAGCGTAACATAGTGGAAAGGACATTTGGAGTTATCAAAAGCCAGTGAGAATCCTGAGGGAAATACCTTATTTCCTTAGGAGTGACGACCATACCAAGATCATACATTGTGCATTAGTTCTACATAACTTCAGGATTGACAGCTCCGACATGTATTTCCTTACACAGAACCCATTGTACAATGGATACCCCATCGTTTCAGATGCTCCACCCTACGTGGCTGGAACGATGTACCTAACAGAGCGGCGGCAATGAATACACTCCGTGATACCATTGCAGATGAAGTTTACAACAGGTAAATGGTATTTAGTTTGCACCGTTTAAAATAATTAACATAGCCATGTCTGTCATGGATATGTTCTCTATATGTATTGTGTTTCTAAAATCTGTCTGTACTCGTCCATGTGTAGTTCACTGTGTTCCTACTACTGTCGTGTTTGTGTGATTTATCTCTAGCATCCTCTCATGCTTAATATTACCA]

[+] EMBL CF328914             [CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAGATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF328913             [ TCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAGATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK070896             [   CCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAGATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAG TTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAAAAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGAAGTTAGAGTTGAGCCAGAGGCAGATCATGAGGAAGACTCCATCATTAACATGTTGGTAGCTGATTTGGAAGCCCATGAGCAAGGAACATGAGCACTTCTGAAAGATCATATGGTTCTAAGGATGGCTACTACAGTGAGGAGGAGGACTCCTTTCTGGACATGTTGGTTGCGGCTTTGAAGGCAAAGCTATGTGTGAGGGCAGCACGTTGGGTATCGCAACAATCTGGAATGGAATGGGTGATGGAGACAATGGAAAACCCATCTCAATGCCAAGCAATTTTCCGTCTGATGCCAGATCAAATCCATGCTCTGTTTGGGTTACTTACTAATCGATACAATCTTCATGGATCAATTGAGGTATGCCCAATGGAAGCACTTGGAATATTTTTGTACATCATGGCGGGGGGCAATTCAAATAGGGCCACTAATAATAGGATGAATGATGAAGAATTCCAGCCATTTGCTGGTGCGGCTGGTGCAGTGGATGGAGCACACATTCATTGCATTGTGGCAGTGGATGATTCCATTCAACACAGGAACCGTCACCACATAACTTCTAGGAATGTTCGTCGCTATTGGATTGGACGACCGTGTCATTTTTGCAGATGTTGGGTGGCTAGGGTCTGTGCATGATCAACCTAACAGAAGCAGTACGGGGCTATCCGTTTGTTTTCCCAAGGCTACCATGGGGGAAATATTTCCTTGTGGACTCGGGATATGCTAGCCGGTATAGATTCCTACCACCTTACCCACATGTTTGGTACCACTTGGATGAATTTGCGGGTAATAAGGGAGCAGCCTTGCCCCATGGAAAGGAAGATACTTTTAACTAAATGCACAGTTCGTAGCGTAACATAGTGGAAAGGACATTTGGAGTTATCAAAAGCCAGTGAGAATCCTGAGGGAAATACCTTATTTCCTTAGGAGTGACGACCATACCAAGATCATACATTGTGCATTAGTTCTACATAACTTCAGGATTGACAGCTCCGACATGTATTTCCTTACACAGAACCCATTGTACAATGGATACCCCATCGTTTCAGATGCTCCACCCTACGTGGCTGGAACGATGTACCTAACAGAGCGGCGGCAATGAATACACTCCGTGATACCATTGCAGATGAAGTTTACAACAGGTAAATGGTATTTAGTTTGCACCGTTTAAAATAATTAACATAGCCATGTCTGTCATGGATATGTTCTCTATATGTATTGTGTTTCTAAAATCTGTCTGTACTCGTCCATGTGTAGTTCACTGTGTTCCTACTACTGTCGTGTTTGTGTGATTTATCTCTAGCATCCTCTCATGCTTAATATTACCA]
[+] EMBL AU101565             [                                      AACCTGACCTCCACCATGAGAGATTANCATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCG CCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGA CTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAG TTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_11159#0
CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAG
ATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCG
AAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTC
GCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCT
CGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCT
CCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTTAATTAAGGGGTAAAGTCC
ATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAAAAGAAGAAAAAAAACCCCAAAGC
TTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAATGGCTAGC
CGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGAAGTTAGAGTTGAG
CCAGAGGCAGATCATGAGGAAGACTCCATCATTAACATGTTGGTAGCTGATTTGGAAGCC
CATGAGCAAGGAACATGAGCACTTCTGAAAGATCATATGGTTCTAAGGATGGCTACTACA
GTGAGGAGGAGGACTCCTTTCTGGACATGTTGGTTGCGGCTTTGAAGGCAAAGCTATGTG
TGAGGGCAGCACGTTGGGTATCGCAACAATCTGGAATGGAATGGGTGATGGAGACAATGG
AAAACCCATCTCAATGCCAAGCAATTTTCCGTCTGATGCCAGATCAAATCCATGCTCTGT
TTGGGTTACTTACTAATCGATACAATCTTCATGGATCAATTGAGGTATGCCCAATGGAAG
CACTTGGAATATTTTTGTACATCATGGCGGGGGGCAATTCAAATAGGGCCACTAATAATA
GGATGAATGATGAAGAATTCCAGCCATTTGCTGGTGCGGCTGGTGCAGTGGATGGAGCAC
ACATTCATTGCATTGTGGCAGTGGATGATTCCATTCAACACAGGAACCGTCACCACATAA
CTTCTAGGAATGTTCGTCGCTATTGGATTGGACGACCGTGTCATTTTTGCAGATGTTGGG
TGGCTAGGGTCTGTGCATGATCAACCTAACAGAAGCAGTACGGGGCTATCCGTTTGTTTT
CCCAAGGCTACCATGGGGGAAATATTTCCTTGTGGACTCGGGATATGCTAGCCGGTATAG
ATTCCTACCACCTTACCCACATGTTTGGTACCACTTGGATGAATTTGCGGGTAATAAGGG
AGCAGCCTTGCCCCATGGAAAGGAAGATACTTTTAACTAAATGCACAGTTCGTAGCGTAA
CATAGTGGAAAGGACATTTGGAGTTATCAAAAGCCAGTGAGAATCCTGAGGGAAATACCT
TATTTCCTTAGGAGTGACGACCATACCAAGATCATACATTGTGCATTAGTTCTACATAAC
TTCAGGATTGACAGCTCCGACATGTATTTCCTTACACAGAACCCATTGTACAATGGATAC
CCCATCGTTTCAGATGCTCCACCCTACGTGGCTGGAACGATGTACCTAACAGAGCGGCGG
CAATGAATACACTCCGTGATACCATTGCAGATGAAGTTTACAACAGGTAAATGGTATTTA
GTTTGCACCGTTTAAAATAATTAACATAGCCATGTCTGTCATGGATATGTTCTCTATATG
TATTGTGTTTCTAAAATCTGTCTGTACTCGTCCATGTGTAGTTCACTGTGTTCCTACTAC
TGTCGTGTTTGTGTGATTTATCTCTAGCATCCTCTCATGCTTAATATTACCA

consensusID : consensus_11159#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1354
fasta sequence

                              [TTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTTTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAAAAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAGTGAGGAGAGGTGTCCGTGTGTTTAGGAATGTACCTCTCAAGTTCATTCCTGAGCATCACGCAGTGTATAGTGGTAGGATAGTTACGCTCAACAAGTCTGGCGTTGTTGGACACAGGCCGGCACCACCACCGGTCCTCCAAGAAGCTCAGATCTTAGATGTTGATGATCTCACCAACCTGGCACTCCTACCACCTTCTCCGGAGCCATCCTTAGGTCCGCGCAGAAGGGGCAAGAGAATCATGACTCCCAGCTACTCTTCAGGTGGCAACAGCAAGGGGACCAGGAGGGACTCCACCGGAGATGCATTTAATAGGCTGGCTGACCTGAGGGTTCAGTCCAATGAAAGTAAGGCCAGGAGGGAGGAGCAGAAGCAAGCGAAGAGCGCTAGAGCATGCATGGAGATGCTCAAGGCTGATGGGATTAGCATGCAGGATCCCGTCTACCACACAATCCTGAGGATGTTTCGTGATGGGTACCTGTGTGAGTTCTTCATTGAGGACTGCACCACACCAGAGGGTCGCATGTACTTCATCCAGCTGCATGGTGCACCAGACCTCACTCCTGACCCCCTGTTGTTTGCTCCACCGCCACCACCAACCTGCTCAGGCCATGTTGAGGGCTGGTACAAGAGGTTCAGTCCTCATGACGATGATGGTAGCGACGGTGCTAATGGTGGTGCTGATGGTGCAGCAATGTTTTAGCACTGCTTCTGCTTGCTTATGTCGCTTTGGTGCCATGTTCTGTTCGTGATGCATCTTTTAATTTCCCTGTGATGTCTGTTTAATAGCTTGCTCCGATTCATATCGAGCATCGTGCTTGTTGTAGGCCTTATTTAAGGGCCCCTTTGAAACACAGGATAGGAAAAACACAGGAATAGGAAAAACGTAGGAATTGAAGTGGTATGTTTTCCTAATCCTACAGGAATGAAAAACACAAGAAATATG]

[+] EMBL AK070253             [TTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTTTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAAAAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAGTGAGGAGAGGTGTCCGTGTGTTTAGGAATGTACCTCTCAAGTTCATTCCTGAGCATCACGCAGTGTATAGTGGTAGGATAGTTACGCTCAACAAGTCTGGCGTTGTTGGACACAGGCCGGCACCACCACCGGTCCTCCAAGAAGCTCAGATCTTAGATGTTGATGATCTCACCAACCTGGCACTCCTACCACCTTCTCCGGAGCCATCCTTAGGTCCGCGCAGAAGGGGCAAGAGAATCATGACTCCCAGCTACTCTTCAGGTGGCAACAGCAAGGGGACCAGGAGGGACTCCACCGGAGATGCATTTAATAGGCTGGCTGACCTGAGGGTTCAGTCCAATGAAAGTAAGGCCAGGAGGGAGGAGCAGAAGCAAGCGAAGAGCGCTAGAGCATGCATGGAGATGCTCAAGGCTGATGGGATTAGCATGCAGGATCCCGTCTACCACACAATCCTGAGGATGTTTCGTGATGGGTACCTGTGTGAGTTCTTCATTGAGGACTGCACCACACCAGAGGGTCGCATGTACTTCATCCAGCTGCATGGTGCACCAGACCTCACTCCTGACCCCCTGTTGTTTGCTCCACCGCCACCACCAACCTGCTCAGGCCATGTTGAGGGCTGGTACAAGAGGTTCAGTCCTCATGACGATGATGGTAGCGACGGTGCTAATGGTGGTGCTGATGGTGCAGCAATGTTTTAGCACTGCTTCTGCTTGCTTATGTCGCTTTGGTGCCATGTTCTGTTCGTGATGCATCTTTTAATTTCCCTGTGATGTCTGTTTAATAGCTTGCTCCGATTCATATCGAGCATCGTGCTTGTTGTAGGCCTTATTTAAGGGCCCCTTTGAAACACAGGATAGGAAAAACACAGGAATAGGAAAAACGTAGGAATTGAAGTGGTATGTTTTCCTAATCCTACAGGAATGAAAAACACAAGAAATATG]




>consensus_11159#1
TTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGA
AGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCG
CACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTTTCTGCCACCGCTC
GTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTC
CTCCCCCAACGAATTAGCCATACGGAAGGACAAGTTTTTTAATTAAGGGGTAAAGTCCAT
CTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAAAAACCCCAAAGCTT
ACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAGTGAGGAGAGG
TGTCCGTGTGTTTAGGAATGTACCTCTCAAGTTCATTCCTGAGCATCACGCAGTGTATAG
TGGTAGGATAGTTACGCTCAACAAGTCTGGCGTTGTTGGACACAGGCCGGCACCACCACC
GGTCCTCCAAGAAGCTCAGATCTTAGATGTTGATGATCTCACCAACCTGGCACTCCTACC
ACCTTCTCCGGAGCCATCCTTAGGTCCGCGCAGAAGGGGCAAGAGAATCATGACTCCCAG
CTACTCTTCAGGTGGCAACAGCAAGGGGACCAGGAGGGACTCCACCGGAGATGCATTTAA
TAGGCTGGCTGACCTGAGGGTTCAGTCCAATGAAAGTAAGGCCAGGAGGGAGGAGCAGAA
GCAAGCGAAGAGCGCTAGAGCATGCATGGAGATGCTCAAGGCTGATGGGATTAGCATGCA
GGATCCCGTCTACCACACAATCCTGAGGATGTTTCGTGATGGGTACCTGTGTGAGTTCTT
CATTGAGGACTGCACCACACCAGAGGGTCGCATGTACTTCATCCAGCTGCATGGTGCACC
AGACCTCACTCCTGACCCCCTGTTGTTTGCTCCACCGCCACCACCAACCTGCTCAGGCCA
TGTTGAGGGCTGGTACAAGAGGTTCAGTCCTCATGACGATGATGGTAGCGACGGTGCTAA
TGGTGGTGCTGATGGTGCAGCAATGTTTTAGCACTGCTTCTGCTTGCTTATGTCGCTTTG
GTGCCATGTTCTGTTCGTGATGCATCTTTTAATTTCCCTGTGATGTCTGTTTAATAGCTT
GCTCCGATTCATATCGAGCATCGTGCTTGTTGTAGGCCTTATTTAAGGGCCCCTTTGAAA
CACAGGATAGGAAAAACACAGGAATAGGAAAAACGTAGGAATTGAAGTGGTATGTTTTCC
TAATCCTACAGGAATGAAAAACACAAGAAATATG

consensusID : consensus_11159#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 977
fasta sequence

                              [CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAGATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGCTGTTCTATGCAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAAAAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGAAGTTAGAGTTGAGCCAGAGGCAGATCATGAGGAAGACTCCATCATTAACATGTTGGTAGCTGATTTGGAAGCCCATGAGCAAGGTAGAGCTGCAAGACGGGCCCCACAACAGGCAGGGATGCAGTGAATGATGGAGACAATGGCCAATGCAGCTCAGTGCCATAATGTGTTTCGCATGAGGCCAGACAAAATTCATGCATTGTTTGGGATATTAGCTATGTGCAACATAGGCCTTTAGATTTATCACATGACATATAACATATTAGTAGTGCCAGTTGCTCTGATTTCAAGTGATCATATATATGACTCTACATGCATTAAGATATGAGATTTACAGCACTGCTGTCTGTACAGATGCTTAAGTTAGTTCTGACCATATGTAGATATGTCAAACTATGCAGCTGTACATTACTTAATCATCTACATGCAGCATAGTTT]

[+] EMBL AK068160             [CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAGATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCGAAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTCGCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGCTGTTCTATGCAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAAAAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAATGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGAAGTTAGAGTTGAGCCAGAGGCAGATCATGAGGAAGACTCCATCATTAACATGTTGGTAGCTGATTTGGAAGCCCATGAGCAAGGTAGAGCTGCAAGACGGGCCCCACAACAGGCAGGGATGCAGTGAATGATGGAGACAATGGCCAATGCAGCTCAGTGCCATAATGTGTTTCGCATGAGGCCAGACAAAATTCATGCATTGTTTGGGATATTAGCTATGTGCAACATAGGCCTTTAGATTTATCACATGACATATAACATATTAGTAGTGCCAGTTGCTCTGATTTCAAGTGATCATATATATGACTCTACATGCATTAAGATATGAGATTTACAGCACTGCTGTCTGTACAGATGCTTAAGTTAGTTCTGACCATATGTAGATATGTCAAACTATGCAGCTGTACATTACTTAATCATCTACATGCAGCATAGTTT]




>consensus_11159#2
CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAG
ATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCG
AAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTC
GCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCT
CGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCT
CCTCCCCCAACGAATTAGCCATACGGAAGGACAAGCTGTTCTATGCAGTTTTTTAATTAA
GGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAA
AAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAA
TGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGAA
GTTAGAGTTGAGCCAGAGGCAGATCATGAGGAAGACTCCATCATTAACATGTTGGTAGCT
GATTTGGAAGCCCATGAGCAAGGTAGAGCTGCAAGACGGGCCCCACAACAGGCAGGGATG
CAGTGAATGATGGAGACAATGGCCAATGCAGCTCAGTGCCATAATGTGTTTCGCATGAGG
CCAGACAAAATTCATGCATTGTTTGGGATATTAGCTATGTGCAACATAGGCCTTTAGATT
TATCACATGACATATAACATATTAGTAGTGCCAGTTGCTCTGATTTCAAGTGATCATATA
TATGACTCTACATGCATTAAGATATGAGATTTACAGCACTGCTGTCTGTACAGATGCTTA
AGTTAGTTCTGACCATATGTAGATATGTCAAACTATGCAGCTGTACATTACTTAATCATC
TACATGCAGCATAGTTT

consensusID : consensus_11159#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 571
fasta sequence

                              [GCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGGTGAGAGTATCGCTAGCTACATGCATCTTTAGCTTGATTTGCTATCCACTTAATCGCGGAGACGTACAAGCGGAACCTTGTCTTGTAAGGTGCTGCAACATTAAGTTTTAGATTTGGATGTAGGTATTAAGAAAGTGATGAAATTAAAAACTAAAGAGTTGTGATTGGTTAAAAAAATTGTAATTGAAGAGGTTGCTATATTCTAAGATAAATTTTAAATGCTAAAAATAACTATATTTTGGGTGGGACGGAGGGAGTAACAATTTTTTAAAGAAACCTACAAGCTTTGGAGCCTCTTAACGTTTTGATGCGGAATTTCTTTTCTGCATATTCCAGTTAGCTGTTGTAACCCCACATTAAACATTTCCTGATTTATTGTTGCTAGCTGTTCTATGCAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAA]

[+] EMBL CA766044             [GCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGGACAAGGTGAGAGTATCGCTAGCTACATGCATCTTTAGCTTGATTTGCTATCCACTTAATCGCGGAGACGTACAAGCGGAACCTTGTCTTGTAAGGTGCTGCAACATTAAGTTTTAGATTTGGATGTAGGTATTAAGAAAGTGATGAAATTAAAAACTAAAGAGTTGTGATTGGTTAAAAAAATTGTAATTGAAGAGGTTGCTATATTCTAAGATAAATTTTAAATGCTAAAAATAACTATATTTTGGGTGGGACGGAGGGAGTAACAATTTTTTAAAGAAACCTACAAGCTTTGGAGCCTCTTAACGTTTTGATGCGGAATTTCTTTTCTGCATATTCCAGTTAGCTGTTGTAACCCCACATTAAACATTTCCTGATTTATTGTTGCTAGCTGTTCTATGCAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAA]




>consensus_11159#3
GCTAGCGTTGCCCCTGTCTCTGCCACCGCTCGTCGCCGCGGCCGGCCTGCCTGTAGATCG
TACGCCGACTTCGACGACGTACGGCCACCTCCTCCCCCAACGAATTAGCCATACGGAAGG
ACAAGGTGAGAGTATCGCTAGCTACATGCATCTTTAGCTTGATTTGCTATCCACTTAATC
GCGGAGACGTACAAGCGGAACCTTGTCTTGTAAGGTGCTGCAACATTAAGTTTTAGATTT
GGATGTAGGTATTAAGAAAGTGATGAAATTAAAAACTAAAGAGTTGTGATTGGTTAAAAA
AATTGTAATTGAAGAGGTTGCTATATTCTAAGATAAATTTTAAATGCTAAAAATAACTAT
ATTTTGGGTGGGACGGAGGGAGTAACAATTTTTTAAAGAAACCTACAAGCTTTGGAGCCT
CTTAACGTTTTGATGCGGAATTTCTTTTCTGCATATTCCAGTTAGCTGTTGTAACCCCAC
ATTAAACATTTCCTGATTTATTGTTGCTAGCTGTTCTATGCAGTTTTTTAATTAAGGGGT
AAAGTCCATCTTACTCTCCAAATATGGCAAA

consensusID : consensus_11159#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 352
fasta sequence

                              [TTTTTTTTTTTTGCCTTTGCCATATTTGGAGAGTAAGATGGACTTTACCCCTTAATTAAAAAACCGCATAGAACAGCTAGCAACAATAAATCAGGAAATGTTTAATGTGGGGTTACAACAGCTAACTGGATTATGCAAAAAAGAAATCCCGCATCAAAACATTAAGAGGCTCCAAAGCTTGTAGGTTTCTTTAAAAAATTGTTACTCCCTCCGTCCCACCCAAAGTATAGTTATTTTTAGCATTTAAAATTTATCTTAGAATATAGCAACCTCTTCAATTACAATTTTTTTAACCAATCACAACTCTTCAGTTTTTAATTTCATCACTTTCTTACCCCTTGTCTCGTCCTCT]

[+] EMBL CA760786             [TTTTTTTTTTTTGCCTTTGCCATATTTGGAGAGTAAGATGGACTTTACCCCTTAATTAAAAAACCGCATAGAACAGCTAGCAACAATAAATCAGGAAATGTTTAATGTGGGGTTACAACAGCTAACTGGATTATGCAAAAAAGAAATCCCGCATCAAAACATTAAGAGGCTCCAAAGCTTGTAGGTTTCTTTAAAAAATTGTTACTCCCTCCGTCCCACCCAAAGTATAGTTATTTTTAGCATTTAAAATTTATCTTAGAATATAGCAACCTCTTCAATTACAATTTTTTTAACCAATCACAACTCTTCAGTTTTTAATTTCATCACTTTCTTACCCCTTGTCTCGTCCTCT]




>consensus_11159#4
TTTTTTTTTTTTGCCTTTGCCATATTTGGAGAGTAAGATGGACTTTACCCCTTAATTAAA
AAACCGCATAGAACAGCTAGCAACAATAAATCAGGAAATGTTTAATGTGGGGTTACAACA
GCTAACTGGATTATGCAAAAAAGAAATCCCGCATCAAAACATTAAGAGGCTCCAAAGCTT
GTAGGTTTCTTTAAAAAATTGTTACTCCCTCCGTCCCACCCAAAGTATAGTTATTTTTAG
CATTTAAAATTTATCTTAGAATATAGCAACCTCTTCAATTACAATTTTTTTAACCAATCA
CAACTCTTCAGTTTTTAATTTCATCACTTTCTTACCCCTTGTCTCGTCCTCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11159#0      CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAG 60
consensus_11159#2      CTCCCAGAGCCAAAGCCCCCTCCACATCCCAAGTTCCTAACCTGACCTCCACCATGAGAG 60
consensus_11159#1      ------------------------------------------------------------
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      ATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCG 120
consensus_11159#2      ATTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCG 120
consensus_11159#1      -TTAACATCCCAACCAGCTGCTGCTCGCAACGTACGTAGCATCTTGCCCGCCCCTCGTCG 59
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      AAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTC 180
consensus_11159#2      AAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTC 180
consensus_11159#1      AAGTCCGACCCGCAGCTAGCTCAGCCGGCGGCCGGCGAGCACAACGTACGTGGTGGGGTC 119
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      GCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCT 240
consensus_11159#2      GCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTCTCTGCCACCGCT 240
consensus_11159#1      GCACTCGCGCACCACCGGCGGAGCTAGCTAGCTAGCGTTGCCCCTGTTTCTGCCACCGCT 179
consensus_11159#3      ------------------------------GCTAGCGTTGCCCCTGTCTCTGCCACCGCT 30
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      CGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCT 300
consensus_11159#2      CGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCT 300
consensus_11159#1      CGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCT 239
consensus_11159#3      CGTCGCCGCGGCCGGCCTGCCTGTAGATCGTACGCCGACTTCGACGACGTACGGCCACCT 90
consensus_11159#4      ---------------TTTTTTTTTTTTGCCTTTGCCATATTTGGAGAGTAAGATGGACTT 45
                                        *   * *    * *  ***   ** *  **   *     ** *

consensus_11159#0      CCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTT------------TTTTTAATTAA 348
consensus_11159#2      CCTCCCCCAACGAATTAGCCATACGGAAGGACAAGCTGTTCTATGCAGTTTTTTAATTAA 360
consensus_11159#1      CCTCCCCCAACGAATTAGCCATACGGAAGGACAAGTT-------------TTTTAATTAA 286
consensus_11159#3      CCTCCCCCAACGAATTAGCCATACGGAAGGACAAGGTGA-----GAGTATCGCTAGCTAC 145
consensus_11159#4      TACCCCTTAATTAAAAAACCGCATAGAACAGCTAGCAA------------CAATAAATCA 93
                          ***  **  **  * **  *  ***   * **                  **  *  

consensus_11159#0      GGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAAAAGAAGAAAAA 408
consensus_11159#2      GGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAA 420
consensus_11159#1      GGGGTAAAGTCCATCTTACTCTCCAAATATGGCAAAGGCAAAGAAAAAGAAGAAGAAAAA 346
consensus_11159#3      ATGC--ATCTTTAGCTTGATTTGCTATCCACTTAATCGCGGAGACGTACAAGCGGAACCT 203
consensus_11159#4      GGAA--ATGTTTAATGTGGGGTTACAACA--GCTAACTGGATTATGCAAAAAAGAAATCC 149
                             *  *  *   *    *   *        *        *   * **    **   

consensus_11159#0      AAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAA 468
consensus_11159#2      AAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAA 480
consensus_11159#1      AAACCCCAAAGCTTACTTTTGAATAATTGGATTGGACAGTCATAGGAAAGAAAAAATAAA 406
consensus_11159#3      TGTCTTGTAAGG----TGCTGCAACATTAAGTTTTAGATTTGGATGTAGGTATTAAGAAA 259
consensus_11159#4      CGCATCAAAACA----TTAAGAGGCTCCAAAGCTTGTAGGTTTCTTTAAAAAATTGTTAC 205
                               **      *   *                *         *   *      * 

consensus_11159#0      TGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGA- 527
consensus_11159#2      TGAATGGCTAGCCGCCCCCGTCGCACTGCTCGTGCACCAAACCGTTTCGGTTTTGAGGA- 539
consensus_11159#1      TGAGTGAGGAGAGGTGTCCGTGTGTTTAGGAATGTACCTCTCAAGTTCATTCCTGAGCAT 466
consensus_11159#3      GTGATGAA-ATTAAAAACTAAAGAGTTGTGATTGGTTAAAAAAATTGTAATTGAAGAGGT 318
consensus_11159#4      TCCCTCCGTCCCACCCAAAGTATAGTTATTTTTAG-CATTTAAAATTTATCTTAGAATAT 264
                           *                     *     *            *              

consensus_11159#0      -AGTTAGAGTTGAGCCAGAGGCAGATCA-TGAGGAA-GACTCCATCATTAACATGTTGGT 584
consensus_11159#2      -AGTTAGAGTTGAGCCAGAGGCAGATCA-TGAGGAA-GACTCCATCATTAACATGTTGGT 596
consensus_11159#1      CACGCAGTGTATAGTGGTAGGATAGTTA-CGCTCAACAAGTCTGGCGTTGTTG-GACACA 524
consensus_11159#3      TGCTATATTCTAAGATAAATTTTAAATG-CTAAAAATAACTATATTTTGGGTGGGACGGA 377
consensus_11159#4      AGCAACCTCTTCAATTACAATTTTTTTAACCAATCACAACTCTTCAGTTTTTAATTTCAT 324
                                   *     *                *  * *      *            

consensus_11159#0      AGCTGATTTGGAAGCCCATGAGCAAGGAACATGAGCACTTCTGAAAGATCATATGGTTCT 644
consensus_11159#2      AGCTGATTTGGAAGCCCATGAGCAAGGTA------------------------------- 625
consensus_11159#1      GGCCGGCACCACCACCGGTCCTCCAAGAAGCTCAG------------------------- 559
consensus_11159#3      GGG------AGTAACAATTTTTTAAAGAA------------------------------- 400
consensus_11159#4      CACTTTCTTACCCCTTGTCTCGTCCTCT-------------------------------- 352
                                                                                   

consensus_11159#0      AAGGATGGCTACTACAGTGAGGAGGAGGACTCCTTTCTGGACATGTTGGTTGCGGCTTTG 704
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      ------------------------------------------ATCTTAGATGTTGATGAT 577
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      AAGGCAAAGCTATGTGTGAGGGCAGCACGTTGGGTATCG-CAACAATCTGGAATGGAATG 763
consensus_11159#2      -------------------GAGCTGCAAGACGGGCCCCA-CAACAGGCAGGGATGCAGTG 665
consensus_11159#1      CTCACCAACCTGGCACTCCTACCACCTTCTCCGGAGCCATCCTTAGGTCCGCGCAGAAGG 637
consensus_11159#3      --------------------ACCTACAAGCTTTGGAGCCTCTTAACGTTTTGATGCGG-- 438
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      GGTGATGGAGACAATGGAAAACCCATCTCAATGCCAAGCAATTTTCCGTCTGATGCCAGA 823
consensus_11159#2      AATGATGGAGACAATGGCCAATGCAGCTCAGTGCCATAATGTGTTTCGCATGAGGCCAGA 725
consensus_11159#1      GGCAAGAGAATCA-TGACT--CCCAGCTACTCTTCAGGTGGCAACAGCAAGGGGACCAGG 694
consensus_11159#3      ---AATTTCTTTTCTGCATATTCCAGTTAGCTGTTGTAACCCCACATTAAACATTTCCTG 495
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      TCAAATCCATGC--TCTGTTTGGGTTACTTA-CTAATCGATACA--ATCTTCATGGATCA 878
consensus_11159#2      CAAAATTCATGC--ATTGTTTGGGATATTAG-CTATGTGCAACAT-AGGCCTTTAGATTT 781
consensus_11159#1      AGGGACTCCACC--GGAGATGCATTTAATAGGCTGGCTGACCTGA-GGGTTC--AGTCCA 749
consensus_11159#3      ATTTATTGTTGCTAGCTGTTCTATGCAGTTTTTTAATTAAGGGGTAAAGTCCATCTTACT 555
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      ATTGAGGTATGCCCAATGG-AAGCACTTGGAATAT-TTTTGTACATCATGGCGGGGGGCA 936
consensus_11159#2      ATCA---CATGACATATA--ACATATTAGTAGTGC-CAGTTGCTCTGATTTCAAGTGATC 835
consensus_11159#1      ATGAAAGTAAGGCCAGGAGGGAGGAGCAGAAGCAAGCGAAGAGCGCTAGAGCATGCATGG 809
consensus_11159#3      CTCCAAATATGGCAAA-------------------------------------------- 571
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      ATTCAAATAGGGCCACTAATAATAGGATGAATGATGAAGAATTCCAGCCATTTGCTGGTG 996
consensus_11159#2      ATATATATGACTCTACATGCATTAAGATATGAGATTTACAGCACT-GCTGTCTGTACAGA 894
consensus_11159#1      AGATGCTCAAGGCTGATGGGATTAGCATGCAGGATCCCGTCTACCACACAATCCTGAGGA 869
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      CGGCTGGTGCAGTG--GATGGAGCACACATTCATTGC--ATTGTG--GCAGTGGATGATT 1050
consensus_11159#2      TGCTTAAGTTAGTTCTGACCATATGTAGATATGTCAA--ACTATGCAGCTGTACATTACT 952
consensus_11159#1      TGTTTCGTGATGGGTACCTGTGTGAGTTCTTCATTGAGGACTGCACCACACCAGAGGGTC 929
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      CCATTCAACACAGGAACCGTCACCACATAACTTCTAGGAATGTTCGTCGCTATTGGATTG 1110
consensus_11159#2      TAATCATCTACATGCAGCATAGTTT----------------------------------- 977
consensus_11159#1      GCATGTACTTCATCCAGCTGCATGGTGCACCAGACCTCACTCCTGACCCCCTGTTGTTTG 989
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      GACGACCGTGTCATTTTTGCAGATGTTGGGTGGCTAGGGTCTGTGCATGATCAACCTAAC 1170
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      CTCCACCGCCACCACCAACCTGCTCAGGCCATGTTGAGGGCTGGTACAAGAGGTTCAGTC 1049
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      AGAAGCAGTACGGGGCTATC--CGTTTGTTTTCCCAAGGCTACCATGGGGGAAATATTTC 1228
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      CTCATGACGATGATGGTAGCGACGGTGCTAATGGTGGTGCTGATGGTGCAGCAATGTTTT 1109
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      CTTGTGGACTCGGGATATGCTAGCCGGTATAGATTCCTACCACCTTACCCACATGTTTGG 1288
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      AGCACTGCTTCTGCTTGCTTATGTCGCTTTGGTGCCATGTTCTGTTCGTGATGCATCTTT 1169
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      TACCACTTGGATGAATTTGCGGGTAATAAGGGAGCAGCCTTGCCCCATGGAAAGGAAGAT 1348
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      TAATTTCCCTGTGA-TGTCTGTTTAATAGCTTGCTCCGATTCATATCGAGCATCGTGCTT 1228
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      ACTTTTAACTAAATGCACAGTTCGTAGCGTAACATAGTGGAAAGGACATTTGGAGTTATC 1408
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      GTTGTAGGCCTTATTTAAGGGCCCCTTTGAAACACAGGATAGGAAAAACACAGGAATAGG 1288
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      AAAAGCCAGTGAGAATCCTGAGGGAAATACCTTATTTCCTTAGGAGTGACGACCATACCA 1468
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      AAAAACGTAGGAATTGAAGTGGTATGTTTTCCTAATCCTACAGGAATGAAAAACACAAGA 1348
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      AGATCATACATTGTGCATTAGTTCTACATAACTTCAGGATTGACAGCTCCGACATGTATT 1528
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      AATATG------------------------------------------------------ 1354
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      TCCTTACACAGAACCCATTGTACAATGGATACCCCATCGTTTCAGATGCTCCACCCTACG 1588
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      ------------------------------------------------------------
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      TGGCTGGAACGATGTACCTAACAGAGCGGCGGCAATGAATACACTCCGTGATACCATTGC 1648
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      ------------------------------------------------------------
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      AGATGAAGTTTACAACAGGTAAATGGTATTTAGTTTGCACCGTTTAAAATAATTAACATA 1708
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      ------------------------------------------------------------
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      GCCATGTCTGTCATGGATATGTTCTCTATATGTATTGTGTTTCTAAAATCTGTCTGTACT 1768
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      ------------------------------------------------------------
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      CGTCCATGTGTAGTTCACTGTGTTCCTACTACTGTCGTGTTTGTGTGATTTATCTCTAGC 1828
consensus_11159#2      ------------------------------------------------------------
consensus_11159#1      ------------------------------------------------------------
consensus_11159#3      ------------------------------------------------------------
consensus_11159#4      ------------------------------------------------------------
                                                                                   

consensus_11159#0      ATCCTCTCATGCTTAATATTACCA 1852
consensus_11159#2      ------------------------
consensus_11159#1      ------------------------
consensus_11159#3      ------------------------
consensus_11159#4      ------------------------