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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11172#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2584 fasta sequence
[AGTCGTCTTCGTCTTCCTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCTGCTATTATCCCCGATCCAAACCCTAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCTCCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGAAACGGCGCTAAAGCTTGACAGTTTTGTCGGCGACGTAGAAGATGCTGTTTCATCTTCTGTGACCGGAAAACTTAAATCTCGTGCAGAAAGTTCACTGAAAACATATCATGTTCCTATTGGATATCTTAAAACAATAGAAGATATTTTATCTTCAGTCACAAAGACCAGACCACAATGGACTCGCCTTGTTTCTGCAGTGGATCACAGAGTTGACCGATCTTTGGCTCTACTAAGACCACAAGCAATTGTCGATCATCGAGCTCTTTTGGCATCCCTTGGCTGGCCTCCATCACTTTCTGGAACAAATTTTTCTAGTATTAATTCTGGGAAACCATCAGAGATTGTGAACCCCTTATTTTCAATGAAGGGTGACCTGAAAAGCAAGTATTCTGAGAGCTTTCTTTCGCTATGCAGTTTGCAGGAATTGCAAAAACGTAGAAAAGCTCGACAGCTAGAAGGGCACATTGTCAACAATCAACTACGTCAACCATTATGGGTAATTGAAGAGTTAGTAAATCCAATAGCTGCTGCCGCACAACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGATAACTAGAGACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAACCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGACATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGCTGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGATGATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGACTCCTAC-TTTC-GGT-GAAGGATGATGATAATT-GGCA-GAGGATCTCGGTTCTCTCCGTCTTCTGTGATCGGCCAGACTGGCTTGAAATATGGGCAGAGATTGAGAGACAGGATACTCATGATAAGCTGAGATTATCAATGGAGAATGAGAAAAACTGGAATACAAGGTTTCAAGGAACAGTGCTTGAATATGGTTCAGATGACTATAAGTCTCCAGCAATTACCGGTGTAATCCAAAAGGGCCTGTCCTTGCTAATAGATCGTGCTCGGCCCATTCCAAATATAGCACTTAGAGCAGAATTCATTAAGATTTCTACTTCACCTTTATTATCAGAGTTCCTTGGCTGGATGCTTCAAAGGTGCCAAGAAGCAGAGGGATTAACAGCTCTGGCAGATGATAATGCTCTTCTCAAGGTATCACAGTCCATTAATGCAGCTCGATACCTTGAGTCCACATTGACAGAATGGTGCAATGATGTATTCTTTCTTGAGATGGAAAATATAGATGGCCGTAGCGAATGTATCTTCCAAGTGGAGATAAATCAACTGAAAGATTTTAGAGT-ACAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGA-TTATCTGAAAAATAAAAGGCAGTGG-CAGGAGAAATCAGAAGGGTTAACATTATCCAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATTTTCAGTGGCAGCAC-AAAG-TTTAGTAATGGC-GGGGTGGAAAGACTTCATGGTGATCTGAGTATATT-GTTTGCTGCTTTTTCTGCGTGGTGTA-TGAGGCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACTAAGGAATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCACTTCGTACGGTTTTATTTCATACAAATTTTATTACTGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK101365 [AGTCGTCTTCGTCTTCCTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCTGCTATTATCCCCGATCCAAACCCTAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCTCCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGAAACGGCGCTAAAGCTTGACAGTTTTGTCGGCGACGTAGAAGATGCTGTTTCATCTTCTGTGACCGGAAAACTTAAATCTCGTGCAGAAAGTTCACTGAAAACATATCATGTTCCTATTGGATATCTTAAAACAATAGAAGATATTTTATCTTCAGTCACAAAGACCAGACCACAATGGACTCGCCTTGTTTCTGCAGTGGATCACAGAGTTGACCGATCTTTGGCTCTACTAAGACCACAAGCAATTGTCGATCATCGAGCTCTTTTGGCATCCCTTGGCTGGCCTCCATCACTTTCTGGAACAAATTTTTCTAGTATTAATTCTGGGAAACCATCAGAGATTGTGAACCCCTTATTTTCAATGAAGGGTGACCTGAAAAGCAAGTATTCTGAGAGCTTTCTTTCGCTATGCAGTTTGCAGGAATTGCAAAAACGTAGAAAAGCTCGACAGCTAGAAGGGCACATTGTCAACAATCAACTACGTCAACCATTATGGGTAATTGAAGAGTTAGTAAATCCAATAGCTGCTGCCGCACAACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGATAACTAGAGACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAACCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGACATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGCTGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGATGATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGACTCCTAC TTTC GGT GAAGGATGATGATAATT GGCA GAGGATCTCGGTTCTCTCCGTCTTCTGTGATCGGCCAGACTGGCTTGAAATATGGGCAGAGATTGAGAGACAGGATACTCATGATAAGCTGAGATTATCAATGGAGAATGAGAAAAACTGGAATACAAGGTTTCAAGGAACAGTGCTTGAATATGGTTCAGATGACTATAAGTCTCCAGCAATTACCGGTGTAATCCAAAAGGGCCTGTCCTTGCTAATAGATCGTGCTCGGCCCATTCCAAATATAGCACTTAGAGCAGAATTCATTAAGATTTCTACTTCACCTTTATTATCAGAGTTCCTTGGCTGGATGCTTCAAAGGTGCCAAGAAGCAGAGGGATTAACAGCTCTGGCAGATGATAATGCTCTTCTCAAGGTATCACAGTCCATTAATGCAGCTCGATACCTTGAGTCCACATTGACAGAATGGTGCAATGATGTATTCTTTCTTGAGATGGAAAATATAGATGGCCGTAGCGAATGTATCTTCCAAGTGGAGATAAATCAACTGAAAGATTTTAGAGT ACAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGA TTATCTGAAAAATAAAAGGCAGTGG CAGGAGAAATCAGAAGGGTTAACATTATCCAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATTTTCAGTGGCAGCAC AAAG TTTAGTAATGGC GGGGTGGAAAGACTTCATGGTGATCTGAGTATATT GTTTGCTGCTTTTTCTGCGTGGTGTA TGAGGCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACTAAGGAATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCACTTCGTACGGTTTTATTTCATACAAATTTTA ]
[+] EMBL OSS14549A [ AGCTGCTGCCGCACAACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGATAACTAGAGACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAACCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGACATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGCTGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGATGATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGGCTCCTACTTTTCGGGTGGAGGGATGATGGTAATTNGGCAGGAGG TCT ]
[+] EMBL AU096633 [ atTTTTAGAGTNCCAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATCCCCGGTCAAGGGATTTATCTGAAAAATAAAAGGCAGTGGCCAGGAGAAATCAGAAGGGTTAACATTATCCAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATTTTCAGTGGCAGCAC AAAG TTTAGTAATGGC GGGGTGGAAAGACTTCATGGTGATCTGAGTATATT GTTTGCTGCTTTTTCTGCGTGGTGTA TGAGGCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACTAAGGAATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCA TTCGTACGGTTTTATTTCATACAAATTTTATTACTGTGCTAAAAAAA ]
[-] EMBL D42982 [ AGGGGCAGCACAAAAGTTTTAGTAAAGNCNGGGGTGGAAANCCNTCATGGTGANCTGAGTATATTGGTNTGCTGCTTTAACNCCGTGGTGTATTGAGNCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCNTGTACAGATAACAANCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACTAAGGAATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCACTNCGTACGGTTTTATTTCATACAAATTTTAT ]
[+] EMBL CF318583 [ TAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACTAAGGAATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCACTTCGTACGGTTTTATTTCATACAAATTTTATTACTGTGCTAAAAAAA ]
[-] EMBL CF318584 [ gGTTTGACGGCTGTTGAGGTTGAGAAGATAATAAAAACCAGAATTTATGAGTGGTAATATATATAAGGACTAAGGAATAACAAATAGCAGGGTTGAAGTTTGAAATGAGTTGTGAAAAACCATGATCCCTTTGTACGGTTTTATTTCATACAAATTTTATTACTGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11172#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence
[AGTGGGCCAATGGGGTCTTCTTTCTTGAGATGCAAAATATAGCTGGCCGTAGCGAATGTTCCTTCCAAGTGGAGATCAATCACCTGAAAGATCTTAGAGTCCAATGCCCTGAAAAGATTTCTCCCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGATTATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTACCATTATCCAGGGCATTCGTAGAATGTTTAGCCTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATCTTCAGTGGCAGCCCAAAGTTTAGTAATGGCGGGGTGGAAAGACTTCATGGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGGCTTCTTTCCAAGACTGTTTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAACCAGAATCTTTGAGTCGTAATATATATAAGGACTAAGGAGTAACAGATAGCAGGGTTGAAGTTAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762267 [AGTGGGCCAATGGGGTCTTCTTTCTTGAGATGCAAAATATAGCTGGCCGTAGCGAATGTTCCTTCCAAGTGGAGATCAATCACCTGAAAGATCTTAGAGTCCAATGCCCTGAAAAGATTTCTCCCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGATTATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTACCATTATCCAGGGCATTCGTAGAATGTTTAGCCTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATCTTCAGTGGCAGCCCAAAGTTTAGTAATGGCGGGGTGGAAAGACTTCATGGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGGCTTCTTTCCAAGACTGTTTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAACCAGAATCTTTGAGTCGTAATATATATAAGGACTAAGGAGTAACAGATAGCAGGGTTGAAGTTAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11172#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence
[TCCTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCTGCTATTATCCCCGATCCAAACCCTAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCACCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGGTGAGTGTGAAATTAGTTTCCTCGGACCTTGTATCCGTGCTTTGTTTGATATTTGATATTTCGGATGATTAAAAGCTGACAATGAGATCACTCCTATGACAAC]
[+] EMBL AK111248 [TCCTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCTGCTATTATCCCCGATCCAAACCCTAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCACCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGGTGAGTGTGAAATTAGTTTCCTCGGACCTTGTATCCGTGCTTTGTTTGATATTTGATATTTCGGATGATTAAAAGCTGACAATGAGATCACTCCTATGACAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11172#0 AGTCGTCTTCGTCTTCCTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCTGCTATTA 60
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TCCCCGATCCAAACCCTAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCGACCCGCG 120
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GACATCTCCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTC 180
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCG 240
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGC 300
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACC 360
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAA 420
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 CTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGAAACG 480
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GCGCTAAAGCTTGACAGTTTTGTCGGCGACGTAGAAGATGCTGTTTCATCTTCTGTGACC 540
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GGAAAACTTAAATCTCGTGCAGAAAGTTCACTGAAAACATATCATGTTCCTATTGGATAT 600
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 CTTAAAACAATAGAAGATATTTTATCTTCAGTCACAAAGACCAGACCACAATGGACTCGC 660
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 CTTGTTTCTGCAGTGGATCACAGAGTTGACCGATCTTTGGCTCTACTAAGACCACAAGCA 720
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 ATTGTCGATCATCGAGCTCTTTTGGCATCCCTTGGCTGGCCTCCATCACTTTCTGGAACA 780
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 AATTTTTCTAGTATTAATTCTGGGAAACCATCAGAGATTGTGAACCCCTTATTTTCAATG 840
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 AAGGGTGACCTGAAAAGCAAGTATTCTGAGAGCTTTCTTTCGCTATGCAGTTTGCAGGAA 900
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TTGCAAAAACGTAGAAAAGCTCGACAGCTAGAAGGGCACATTGTCAACAATCAACTACGT 960
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 CAACCATTATGGGTAATTGAAGAGTTAGTAAATCCAATAGCTGCTGCCGCACAACGCCAT 1020
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGATAACTAGA 1080
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAACCTTGTA 1140
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGACATACTTG 1200
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGCTGATGCT 1260
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 AGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGATGATATCT 1320
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGACTCCTACTTTCGGTGAAGGAT 1380
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GATGATAATTGGCAGAGGATCTCGGTTCTCTCCGTCTTCTGTGATCGGCCAGACTGGCTT 1440
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GAAATATGGGCAGAGATTGAGAGACAGGATACTCATGATAAGCTGAGATTATCAATGGAG 1500
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 AATGAGAAAAACTGGAATACAAGGTTTCAAGGAACAGTGCTTGAATATGGTTCAGATGAC 1560
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TATAAGTCTCCAGCAATTACCGGTGTAATCCAAAAGGGCCTGTCCTTGCTAATAGATCGT 1620
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GCTCGGCCCATTCCAAATATAGCACTTAGAGCAGAATTCATTAAGATTTCTACTTCACCT 1680
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 TTATTATCAGAGTTCCTTGGCTGGATGCTTCAAAGGTGCCAAGAAGCAGAGGGATTAACA 1740
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GCTCTGGCAGATGATAATGCTCTTCTCAAGGTATCACAGTCCATTAATGCAGCTCGATAC 1800
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 CTTGAGTCCACATTGACAGAATGGTGCAATGATGTATTCTTTCTTGAGATGGAAAATATA 1860
consensus_11172#1 -------------------AGTGGGCCAATGGGGTCTTCTTTCTTGAGATGCAAAATATA 41
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 GATGGCCGTAGCGAATGTATCTTCCAAGTGGAGATAAATCAACTGAAAGATTTTAGAGTA 1920
consensus_11172#1 GCTGGCCGTAGCGAATGTTCCTTCCAAGTGGAGATCAATCACCTGAAAGATCTTAGAGTC 101
consensus_11172#2 ----------------------------------------------------------TC 2
*
consensus_11172#0 CAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGAT 1980
consensus_11172#1 CAATGCCCTGAAAAGATTTCTCCCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGAT 161
consensus_11172#2 CTCCTTGCCATCTCGCCCAATCTCGAGATTCTCCGCTGCTATTATCCCCGATCCAAACCC 62
* * * * ** *** * * * * ** **** ** *
consensus_11172#0 TATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTAACATTATCCAGGGCA 2040
consensus_11172#1 TATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTACCATTATCCAGGGCA 221
consensus_11172#2 TAATCGATCCCGCCATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCACCCCGGAGC 122
** ** * ** ** *** * ** * *** * ** **
consensus_11172#0 TTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAAT 2100
consensus_11172#1 TTCGTAGAATGTTTAGCCTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAAT 281
consensus_11172#2 TCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCA-AGCAGACCTCGCCGCGGCCGCCGAC 181
* ** * * * * * ** * *** * ** * * * *
consensus_11172#0 GTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTT 2160
consensus_11172#1 GTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTT 341
consensus_11172#2 GTCGAGGCCGAGATCCGCGGGCGCTACGCGG-AGCTCGAGGCCTCGGT-ATCCGACCTCT 239
*** ** * * * * * * ** * ** * * * * * ** *
consensus_11172#0 TCTGGAATTTTCAGTGGCAGCA--CAAAGTTTAGTAATGGCGGGGTGGAAAGACTTCA-T 2217
consensus_11172#1 TCTGGAATCTTCAGTGGCAGCC--CAAAGTTTAGTAATGGCGGGGTGGAAAGACTTCA-T 398
consensus_11172#2 CC--GTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCT--CCAGCTGCAGCGCCGCCGGC 295
* * ** *** ** * ** *** * * * * ** * * * *
consensus_11172#0 GGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGGCTTC 2277
consensus_11172#1 GGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGGCTTC 458
consensus_11172#2 ACCGCTCTGAGTA--ATGTCCGCGGCTGCCTCGCTGCCCTGAATG---CCTCCACCTCTG 350
* ******** *** ** *** ** * ** *** *** * *
consensus_11172#0 TTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGAT 2337
consensus_11172#1 TTTCCAAGACTGTTTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGAT 518
consensus_11172#2 AACCAGGGGTCACAGAAGCGGTGGAGGTT----GGGAGCGAGGAGATGTTGTTTGAGCAA 406
* * ** * * ** *** * * ** **** * * * *
consensus_11172#0 GGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCT 2397
consensus_11172#1 GGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCT 578
consensus_11172#2 CTTTCTTCTCTGGCCAAAGA--GGTGGCGAGAGTGGAGTTGGTCAGGGATTACG-CCGGT 463
*** * * ** * ** * * **** ** * * *** * * *
consensus_11172#0 GAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAATATATATAAGGACTAAGG 2457
consensus_11172#1 GAGGTTGAGAAGATAATAAAAACCAGAATCTTTGAGTCGTAATATATATAAGGACTAAGG 638
consensus_11172#2 GAG--TGTGAAATTAGTTTC--CTCGGACCTTGTATCCGTGCTTTGTTTGATATTTGATA 519
*** ** *** ** * * * ** * *** * * * * * * *
consensus_11172#0 AATAACAGATAGCAGGGTTGAAGTTCGAAATGAGTTGTGAAAAACCATGATCACTTCGTA 2517
consensus_11172#1 AGTAACAGATAGCAGGGTTGAAGTTAAAAAAAAAAAAAAAAAAAA--------------- 683
consensus_11172#2 TTTCGGATGATTAAAAGCTGACAATGAGATCACTCCTATGACAAC--------------- 564
* * * * *** * * * **
consensus_11172#0 CGGTTTTATTTCATACAAATTTTATTACTGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAA 2577
consensus_11172#1 ------------------------------------------------------------
consensus_11172#2 ------------------------------------------------------------
consensus_11172#0 AAAAAAA 2584
consensus_11172#1 -------
consensus_11172#2 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||