cluster # 11180

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Oryza sativa
cluster # 11180 cluster # 11180 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11180#0 length = 816 sequences # 8
consensusID : consensus_11180#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 816
fasta sequence
                              [AACCAGCACCGGCGGCCGCAGCCTCACGCGGCGACCTGAAAACCTCGCAGCCGTAAAACCCTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGC-GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC-TGGAAGATGGACGTACATTAGC-TGATTACAACATTCAGAAAGAGTCAACGCTCCA-TTTGGTCCTGAGGCTCAGGGG-TGGAACCATGATC--AAGGTGAAGACACTCAC-TGGGAAGGAAATCGAGATCGACATTGAGCCCACTGATACCA-TTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGATGTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCTATTTCTATCTGTAGTTGCTGCAGACTTATAGCTATATTTGGTAGGTTTATTGAAGTCCTATGCGATTGGCGCATTGTGTATTGGAATCAATTGTCATCTGTACTGGAAAGGAAATATTGGAACTAAGTTAAGCAGTAGTTTATCAATTGCCATTCTATTAAAAA]

[+] EMBL AK062354             [AACCAGCACCGGCGGCCGCAGCCTCACGCGGCGACCTGAAAACCTCGCAGCCGTAAAACCCTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGC GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC TGGAAGATGGACGTACATTAGC TGATTACAACATTCAGAAAGAGTCAACGCTCCA TTTGGTCCTGAGGCTCAGGGG TGGAACCATGATC  AAGGTGAAGACACTCAC TGGGAAGGAAATCGAGATCGACATTGAGCCCACTGATACCA TTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGATGTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCTATTTCTATCTGTAGTTGCTGCAGACTTATAGCTATATTTGGTAGGTTTATTGAAGTCCTATGCGATTGGCGCATTGTGTATTGGAATCAATTGTCATCTGTACTGGAAAGGAAATATTGGAACTAAGTTAAGCAGTAGTTTATCAATTGCCATTCTATTtc   ]
[+] EMBL CF338217             [                          CGCGGCGACCTGAAAACCTCGCAGCCGTAAAACCCTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGC GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC TGGAAGATGGACGTACATTAGC TGATTACAACATTCAGAAAGAGTCAACGCTCCA TTTGGTCCTGAGGCTCAGGGG TGGAACCATGATC  AAGGTGAAGACACTCAC TGGGAAGGAAATCGAGATCGACATTGAGCCCACTGATACCA TTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGATGTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCT                                                                                                                                                                    ]
[+] EMBL AU078692             [                                            TCGCAGCCGTAAAACCCTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGC GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGTTGATTTTCGCAGGGAAGCAACTTGGAAGATGGACGTACATTAGCTTGATTACAACATTCAGAAAGAGTCAACGNTCCATTTTNGTCCTGAGGCTCAGGGGTTGGACCCATGATCCAAAGGTGAAG CACTNAC Tttgg                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU078657             [                                            TCGCAGCCGTAAAACCCTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGC GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC TGGAAGATGGACGTACATTAGC TGATTACAACATTCAGAAAGAGTCAACGCTCCA TTTGGTCCTGAGGCTCAGGGG TGGAACCATGATC  AAGGTGAAGACACTCAC TGGGAAGGAAATCGAGATCGACATTGAGCCCACTGATACCA TTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGG                                                                                                                                                                                                                                                                     ]
[+] EMBL AU078706             [                                            TCGCAGCCGTAAAACCCTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGC GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC TGGAAGATGGACGTACATTAGC TGATTACAACATTCAGAAAGAGTCAACGCTCCA TTTGGTCCTGAGGCTCAGGGG TGG ACCATGATC  AAGGTGAAGACACTCACTTGGGAAGGAAATCGAGATCGACATTGAGCCCACTNATACCA TTGATAGAAT                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU078658             [                                                                                                                                 GTCCGGTATNCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC TGGAAGATGGACGTACATTAGC TGATTACAACATTCAGAAAGAGTCAACGCTCCA TTTGGTCCTGAGGCTCAGGGG TGGAACCATGATC  AAGGTGAAGACACTCAC TGGGAAGGAAATCGAGATCGACATTGAGCCCACTGATACCA TTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGATGTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCTATTTCTATCTGTAGTTGCTGCAGACTTATAGCTATATTTGGTAGGTTTATTGAAGTCCTATGCGATTGGCGCATTGTGTATTGGAATCAATTGTCATCTGTACTGGAAAGGAAATATTGGAACTAAGTTAAGCAGTAGTTTATCAATTGCCATTCTATTAAAAA]
[+] EMBL CB096902             [                                                                                                                                                                                                                                                                                                                     TGATTACAACATTCAGAAAGAGTCAACGCTCCA TTTGGTCCTGAGGCTCAGGGG TGGAACCNTGATC  AAGGTGAAGACACTCAC TGGGAAGGAAATCGAGATCGACATCGAGCCCACTGATACCACTTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGATGTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCCATTTCTATCTGTAGTTGCTGCAGACTTATAGCTATATTTGGTAGGATTATTGAAGTACTATGCGATTGGCGCATTGTGTATTGGAATCAATTGTCATCTGTACTGGAAAGGAAATATTGGAACTAAGTTAAGCAGTAGTTTATC                    ]
[+] EMBL AU172894             [                                                                                                                                                                                                                                                                                                                                                                                                               GGGAAGGAAATCGAGATCGACATTGAGCCCACTGATACCA TTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGTTCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTACAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGATGTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCTATTTCTATCTGTAGTTGCTGCAGACTTATAGCTATATTTGGTAGGTTTATTGAAGTCCTATGCGATTGGCGCATTGTGTATTGGAATCAATTGTCATCTGTACTGGAAAGGAAATATTGGAACTAAGTTAAGCAGTAGTTTATCAATTGCCATTCTATTAAAAA]




>consensus_11180#0
AACCAGCACCGGCGGCCGCAGCCTCACGCGGCGACCTGAAAACCTCGCAGCCGTAAAACC
CTAGAGGCGGATTCCGGCCGCAGATCGGAGGCGCGGCGGCGGCGGCGGCGGCGGCGGCAG
AGGAGGAGTGTCCGGTATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACCATCACTCT
CGAGGTCGAGAGCAGCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGG
TATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAACTGGAAGATGGACGTAC
ATTAGCTGATTACAACATTCAGAAAGAGTCAACGCTCCATTTGGTCCTGAGGCTCAGGGG
TGGAACCATGATCAAGGTGAAGACACTCACTGGGAAGGAAATCGAGATCGACATTGAGCC
CACTGATACCATTGATAGAATCAAGGAGCGTGTTGAGGAGAAAGAGGGTATTCCACCTGT
TCAGCAGAGGCTCATTTATGCTGGGAAGCAACTTGCTGATGATAAAACTGCCAAGGATTA
CAACATTGAAGGTGGCTCAGTGCTCCATCTCGTGCTTGCTCTGAGGGGTGGTCAGTAGAT
GTAGTTTCCATGCCCGCATTATCTCTAAAGGGAGAAGCATATTTGCTATTCTATTTCTAT
CTGTAGTTGCTGCAGACTTATAGCTATATTTGGTAGGTTTATTGAAGTCCTATGCGATTG
GCGCATTGTGTATTGGAATCAATTGTCATCTGTACTGGAAAGGAAATATTGGAACTAAGT
TAAGCAGTAGTTTATCAATTGCCATTCTATTAAAAA
clustalw multiple alignements is not computed in this case