Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11181 cluster # 11181       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11181#0 length = 1134 sequences # 3  
consensus_11181#1 length = 935 sequences # 4  
consensus_11181#2 length = 664 sequences # 1  

consensusID : consensus_11181#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1134
fasta sequence
                              [GACGCCACCACCTCTCTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAGAAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGTCCTCAACGTCAAGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTCGGCCAACCACTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTATACAGAGGGGACAGCGCACATTCGTGCGATAAGCTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATG-TTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAGTGTTGCTGATCAAAATTCAGTTGAATATAGGCCNTTTGCAGCATGGTTTNTGTNGGTCNATCATAATTNAATTGTGTAGAGGGGAAAAACAGGCATATGGTGGCCGTTTCATTCCNAAAATTTAATNTGATTTGGGGTTTTATAATGCCNAATGNTNTTATTTCAGTTATCTNAATAATGAAATGTGTTTGAAAAA]

[+] EMBL AK069953             [GACGCCACCACCTCTCTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAGAAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGTCCTCAACGTCAAGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTCGGCCAACCACTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTATACAGAGGGGACAGCGCACATTCGTGCGATAAGCTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATG TTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAGTGTTGCTGATCAA                                                                                                                                                                                       ]
[+] EMBL CB643109             [                                                                                                                                                                                                                                                                                                                                                                                                 GCGATCCTTTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATG TTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAGTGTTGCTGATCAAAAT                                                                                                                                                                                    ]
[+] EMBL AU173355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATGAACTGGAAGCACTNTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTNTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATGTTTTTCTGTTTAAAGATCAGGTTGCAGAGCCNAGTGTTGCTGATCAAAATTCAGTTGAATATAGGCCNTTTGCAGCATGGTTTNTGTNGGTCNATCATAATTNAATTGTGTAGAGGGGAAAAACAGGCATATGGTGGCCGTTTCATTCCNAAAATTTAATNTGATTTGGGGTTTTATAATGCCNAATGNTNTTATTTCAGTTATCTNAATAATGAAATGTGTTTGAAAAA]


>consensus_11181#0 GACGCCACCACCTCTCTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATG AATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCG GTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAG AAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGTC CTCAACGTCAAGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTC GGCCAACCACTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTA TACAGAGGGGACAGCGCACATTCGTGCGATAAGCTCTTCACCGTGAAGAAGTCCTCAATG CTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTC TGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAA TCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGG AGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTT GTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTC ATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTA TTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGT GTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGT GAATGTTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAGTGTTGCTGATCAAAATTCAGTT GAATATAGGCCNTTTGCAGCATGGTTTNTGTNGGTCNATCATAATTNAATTGTGTAGAGG GGAAAAACAGGCATATGGTGGCCGTTTCATTCCNAAAATTTAATNTGATTTGGGGTTTTA TAATGCCNAATGNTNTTATTTCAGTTATCTNAATAATGAAATGTGTTTGAAAAA



consensusID : consensus_11181#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 935
fasta sequence
                              [CTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAGAAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGT-CCTCAACGTCAAGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTCGGCCAACCACTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTATACAGAGGGGACAGCGCACATTCGTGCGA-TAAGCTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATGTTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAAAAAAAAAAAAAA]

[+] EMBL BP184448             [CTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAGAAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGT CCTCAACGTCAAGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTCGGCCAACCACTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTATACAGAGGGGACAGCGCACATTCGTGCGA TAAGCTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATGTTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAAAAAAAAAAAAAA]
[+] EMBL OSR24111A            [     CCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGG GGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAANAAGTCCATCAGCCTCANCGACGGCGACTTCACCGTCACCGACGCCAACNACAACGT GTCCCTCAACGTCAAGGGCACCATCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU065372             [                                  AACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGNGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCANGAAGTCCATCAGCCTCANCGACGGCGACTTCANCGTCANCGACGCCAACGACANCGTNTG GCTCAACGTCANGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGNCGTCGGCCAACCANTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAGCAGATGGGAAGTATACAGAGGGGCAAGCGCACATTCGTG GATTAAGNTCTTCAACGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB675819             [                                                                                                     GCCGGTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAGAAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGT CCTCAACGTCAAGGGCACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTCGGCCAACCACTCCTCTCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTATACAGAGGGGACAGCGCACATTCGTGCGA TAAGCTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGGGGTATAACTGCTTACAGCAGTGAATGTTTTCTGTTT                                   ]


>consensus_11181#1 CTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCG ATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGGC CCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAGAAGTCCATCAGCCTC ACCGACGGCGACTTCACCGTCACCGACGCCAACGACAACGTCGTCCTCAACGTCAAGGGC ACCCTCTTCAGCGTCCGCCACCGCCGCGTCCTCCACGACGCCGTCGGCCAACCACTCCTC TCCATGCAAGAGAAGATACTTAGCATGCACAACAGATGGGAAGTATACAGAGGGGACAGC GCACATTCGTGCGATAAGCTCTTCACCGTGAAGAAGTCCTCAATGCTCCAGTTGATGAAG ACGGAGATGGATATCTTCTTGGCCGGGAATACCGCGGAGCAAGTCTGCGATTTCAAGATC AAGGGCAGCTACTGTGACAGATCATCTGCCTTCTACCTTGGCAAATCAAACACAATCATA GCTCAAATGAACCGTAAGCACACCGCTGCAAGTGTGGTGCTGGGGAGGGACGTATTCAGC ATCACCGTGTTCCCGCAAGTCGACTACGTGTTCATCGCGGCTCTTGTTGCGATTCTGGAT GATGTTCACAGGGACAGAAAGGAGTGATGAACTGGAAGCACTCTCATCCCAAGCACCCTT TTAAATTTCACTTTCATATCTGTCAAATTACCTCTGTTCTAGGTATTGCTATCTGGTTGA GGATGTGTGTAAATTTTTCTTTGAATTATGTTTATTTTCGCTGGTGTTCCATGATTTGTA ATTACCTTCAAGATTGATCGATGTTGTATAACTGCTTACAGCAGTGAATGTTTTCTGTTT AAAGATCAGGTTGCAGAGCCAAAAAAAAAAAAAAA



consensusID : consensus_11181#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [CCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGNNCCNNANNACTGCGCGNCNNACGNGNGGCCGCTGACGGNGACCAAGAAAACCATCAGCCTCTCCTAGTTGGACTTCACCGGTCCCGACCCCCACGGACAGGACGGCACCCAGGGGCGGGGGCACCCTCTTCATAGTCCCGCCCCGGGCGGCGCCCCCACGGCCGCCGCCGCGGCAACCGCTCCCCCTCCCTCGCAGCAGAAGACCACTCATACTGCACCACCCGATGGCCGCACCGTCGCTCGGGCGTCGTCGGACATCGCGCGGCGATCAACCTCATTCCCTCGAGGAGAAAACCTTCCCGGTCCCCGAGGTTAGGTGGACGAGCCGGCTGTACCCACCTGTGTGGGCCGCATAGGCGCCGGACGCAGACACAGTCCGGACCGGGATAGCTGTGTCATCCACGCGAGCCAACCGAACAAGCGGACTCCTGCTCCGTGCGTGCTTACCAACCGCAAGAGTCTCAGTCACACTACCGTCGTCCGCGCACACCAGCGCAAGCGAGCAGTGAGGCAGGCGCGCCAAATTCAGACGGAGACTAGACGCGAACG]

[+] EMBL CA755672             [CCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGNNCCNNANNACTGCGCGNCNNACGNGNGGCCGCTGACGGNGACCAAGAAAACCATCAGCCTCTCCTAGTTGGACTTCACCGGTCCCGACCCCCACGGACAGGACGGCACCCAGGGGCGGGGGCACCCTCTTCATAGTCCCGCCCCGGGCGGCGCCCCCACGGCCGCCGCCGCGGCAACCGCTCCCCCTCCCTCGCAGCAGAAGACCACTCATACTGCACCACCCGATGGCCGCACCGTCGCTCGGGCGTCGTCGGACATCGCGCGGCGATCAACCTCATTCCCTCGAGGAGAAAACCTTCCCGGTCCCCGAGGTTAGGTGGACGAGCCGGCTGTACCCACCTGTGTGGGCCGCATAGGCGCCGGACGCAGACACAGTCCGGACCGGGATAGCTGTGTCATCCACGCGAGCCAACCGAACAAGCGGACTCCTGCTCCGTGCGTGCTTACCAACCGCAAGAGTCTCAGTCACACTACCGTCGTCCGCGCACACCAGCGCAAGCGAGCAGTGAGGCAGGCGCGCCAAATTCAGACGGAGACTAGACGCGAACG]


>consensus_11181#2 CCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATGAATCCGATGGCCCCGATGC TGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCGGTGGTGGTGGTTGNNCCNN ANNACTGCGCGNCNNACGNGNGGCCGCTGACGGNGACCAAGAAAACCATCAGCCTCTCCT AGTTGGACTTCACCGGTCCCGACCCCCACGGACAGGACGGCACCCAGGGGCGGGGGCACC CTCTTCATAGTCCCGCCCCGGGCGGCGCCCCCACGGCCGCCGCCGCGGCAACCGCTCCCC CTCCCTCGCAGCAGAAGACCACTCATACTGCACCACCCGATGGCCGCACCGTCGCTCGGG CGTCGTCGGACATCGCGCGGCGATCAACCTCATTCCCTCGAGGAGAAAACCTTCCCGGTC CCCGAGGTTAGGTGGACGAGCCGGCTGTACCCACCTGTGTGGGCCGCATAGGCGCCGGAC GCAGACACAGTCCGGACCGGGATAGCTGTGTCATCCACGCGAGCCAACCGAACAAGCGGA CTCCTGCTCCGTGCGTGCTTACCAACCGCAAGAGTCTCAGTCACACTACCGTCGTCCGCG CACACCAGCGCAAGCGAGCAGTGAGGCAGGCGCGCCAAATTCAGACGGAGACTAGACGCG AACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11181#0      GACGCCACCACCTCTCTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATG 60
consensus_11181#1      ---------------CTTTCCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATG 45
consensus_11181#2      -------------------CCCTCTCTCTCTTCCATTCACCGACAATCTAACTAAAAATG 41
                                          *****************************************

consensus_11181#0      AATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCG 120
consensus_11181#1      AATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCG 105
consensus_11181#2      AATCCGATGGCCCCGATGCTGCCGGCGCCGGCGCCCATGGCGGCGGGGCCGACGGAGCCG 101
                       ************************************************************

consensus_11181#0      GTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAG 180
consensus_11181#1      GTGGTGGTGGTTGGCCCGCAGTACTGCGCGCCGTACGTGGTGCCGCTGACGGTGACCAAG 165
consensus_11181#2      GTGGTGGTGGTTGNNCCNNANNACTGCGCGNCNNACGNGNGGCCGCTGACGGNGACCAAG 161
                       *************  **  *  ******** *  *** *  *********** *******

consensus_11181#0      AAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACG-ACAACGTCGT 239
consensus_11181#1      AAGTCCATCAGCCTCACCGACGGCGACTTCACCGTCACCGACGCCAACG-ACAACGTCGT 224
consensus_11181#2      AAAACCATCAGCCTCTCCTAGTTGGACTTCACCGGTCCCGACCCCCACGGACAGGACGGC 221
                       **  *********** ** *    **********   ***** ** *** ***     * 

consensus_11181#0      CCTCAACGTCAAGGGCACCCTCTTCAGCGTCC-GCCACCGCCGCGTCCTCCACGAC-GCC 297
consensus_11181#1      CCTCAACGTCAAGGGCACCCTCTTCAGCGTCC-GCCACCGCCGCGTCCTCCACGAC-GCC 282
consensus_11181#2      ACCCAGGGGCGGGGGCACCCTCTTCATAGTCCCGCCCCGGGCGGCGCCCCCACGGCCGCC 281
                        * **  * *  **************  **** *** * * **   ** ***** * ***

consensus_11181#0      GTCG-GCCAACCACTCCTCT--CCATGCAAGAGAAGAT-ACTTAGCATGCACAACA-GAT 352
consensus_11181#1      GTCG-GCCAACCACTCCTCT--CCATGCAAGAGAAGAT-ACTTAGCATGCACAACA-GAT 337
consensus_11181#2      GCCGCGGCAACCGCTCCCCCTCCCTCGCAGCAGAAGACCACTCATACTGCACCACCCGAT 341
                       * ** * ***** **** *   **  ***  ******  *** *   ***** **  ***

consensus_11181#0      GG--GAAGTAT-ACAGAGGGGACAGCGCACATT-CGTG-CGATAAGCTC---TTCACCGT 404
consensus_11181#1      GG--GAAGTAT-ACAGAGGGGACAGCGCACATT-CGTG-CGATAAGCTC---TTCACCGT 389
consensus_11181#2      GGCCGCACCGTCGCTCGGGCGTCGTCGGACATCGCGCGGCGATCAACCTCATTCCCTCGA 401
                       **  * *   *  *   ** * *  ** ****  ** * **** * *     * *  ** 

consensus_11181#0      GAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAA 464
consensus_11181#1      GAAGAAGTCCTCAATGCTCCAGTTGATGAAGACGGAGATGGATATCTTCTTGGCCGGGAA 449
consensus_11181#2      GGAGAAAACCTTCCCGGTCCCCGAGGTTAGGTGGACGAGCCGGCTGTACCCACCTGTGTG 461
                       * ****  ***    * ***    * * * *  *  **      * * *    * * *  

consensus_11181#0      TACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGC 524
consensus_11181#1      TACCGCGGAGCAAGTCTGCGATTTCAAGATCAAGGGCAGCTACTGTGACAGATCATCTGC 509
consensus_11181#2      GGCCGCATAGGCGCCGGACGCAGACACAGTCCGG-------ACCGGGATAGCTG---TGT 511
                         ****  **        **    **   **  *       ** * ** ** *    ** 

consensus_11181#0      CTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGC 584
consensus_11181#1      CTTCTACCTTGGCAAATCAAACACAATCATAGCTCAAATGAACCGTAAGCACACCGCTGC 569
consensus_11181#2      CATCCACGCGAGCCAACCGAACA-------------AGCGGACTCC---TGCTCCG-TGC 554
                       * ** **    ** ** * ****             *  * **        * *** ***

consensus_11181#0      AAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGT-GTTCCCGCAAGTCGAC-TAC 642
consensus_11181#1      AAGTGTGGTGCTGGGGAGGGACGTATTCAGCATCACCGT-GTTCCCGCAAGTCGAC-TAC 627
consensus_11181#2      GTGCTTACCAACCGCAAGAGTCTCAGTCA-CACTACCGTCGTCCGCGCACACCAGCGCAA 613
                         *  *       *  ** * *  * *** **  ***** ** * ****   *  *  * 

consensus_11181#0      GTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGA 702
consensus_11181#1      GTGTTCATCGCGGCTCTTGTTGCGATTCTGGATGATGTTCACAGGGACAGAAAGGAGTGA 687
consensus_11181#2      GCGAGCAGTGAGGCAGGCGCGCCAAATTCAGACGGAGACTA----GACGCGAACG----- 664
                       * *  **  * ***    *   * * *   ** *  *   *    ***   ** *     

consensus_11181#0      TGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAA 762
consensus_11181#1      TGAACTGGAAGCACTCTCATCCCAAGCACCCTTTTAAATTTCACTTTCATATCTGTCAAA 747
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      TTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATT 822
consensus_11181#1      TTACCTCTGTTCTAGGTATTGCTATCTGGTTGAGGATGTGTGTAAATTTTTCTTTGAATT 807
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      ATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGT 882
consensus_11181#1      ATGTTTATTTTCGCTGGTGTTCCATGATTTGTAATTACCTTCAAGATTGATCGATGTTGT 867
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      ATAACTGCTTACAGCAGTGAATGTTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAGTGTT 942
consensus_11181#1      ATAACTGCTTACAGCAGTGAATGTTTTCTGTTTAAAGATCAGGTTGCAGAGCCAAAAAAA 927
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      GCTGATCAAAATTCAGTTGAATATAGGCCNTTTGCAGCATGGTTTNTGTNGGTCNATCAT 1002
consensus_11181#1      AAAAAAAA---------------------------------------------------- 935
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      AATTNAATTGTGTAGAGGGGAAAAACAGGCATATGGTGGCCGTTTCATTCCNAAAATTTA 1062
consensus_11181#1      ------------------------------------------------------------
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      ATNTGATTTGGGGTTTTATAATGCCNAATGNTNTTATTTCAGTTATCTNAATAATGAAAT 1122
consensus_11181#1      ------------------------------------------------------------
consensus_11181#2      ------------------------------------------------------------
                                                                                   

consensus_11181#0      GTGTTTGAAAAA 1134
consensus_11181#1      ------------
consensus_11181#2      ------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)