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Oryza sativa
cluster # 11193 cluster # 11193       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11193#0 length = 2475 sequences # 7  
 consensus_11193#1 length = 812 sequences # 1  
consensusID : consensus_11193#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2475
fasta sequence 
                              [CACAGAATGCATCCCCATCCCAAGCCTCTCAGGGCGCAGGCTCCGGCGAACCCAACCCTAGTCCGGTAGCCCCCGACGCCGCCCCACCGCGCCGACGCCGCGCATCCTCCCCGCGGCCCTCGGAGGCATCTCCTCGCCCGTCGTCCCTCGGCGCCTCGCCATCGCCGGCGGTCTGCCTCCGCTGCTCGGCGGCTCGCCCGACGCACCCACGAGTATCTTCCCCTTCCCTGGCGTAAAAGAAAATCTCCCGTCTCGTCTCCTCCGCTCTTTGCGCCGTCTCGCTGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGCCGAGCAGAGCAGGAGAGGGGATCCTGGTCATCATTTGTTGAAAAATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATTCCATTGCTAGAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCCTTGCAATTGCAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAGAAGTCGTACAAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGAATCCTGTAGGCTTATTGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGTGCTTTCCTGAACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTGCGACAAAAATATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAAAAGGTAAGAA-CCTCAACCAATGACATGAATGCGTTGTGTGCTTCAGAGGAGAATACAACTGCTAGTGGGCTGGGTGAACCATCTGAAGCTTCACCTGTTGATGTTAAGCCACGTCCTGTATTGAAGCAACTATGTGAGCAGATGGATACAGCAGGCCTTCTGAAATTTCTTTCAGAAAATTGGAAAAAACTTTCTAGCCTTCGTGATGAACTTTCTGCTGCACTAAGATGTGCTACTGACCCTGCACGCTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAATAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAACACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGAGCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGCTTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGTTGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAAGCAGACTGCTGAGCTTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGATATTATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCTTTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAAAAGATTCACTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAAGACTCGGGAACTACTTGCATTGAGGGCTGTAATAAAATGCATTGAAGAGTATAAGCTTCAGAAGGACTATCCTCTTGGACCTCTCCAGAAGCGTGTTGCTGAGCTAAAATCTAAGGGTGAGAAAAGGCCATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCACTTTCGGCAATTCAGCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTTGGCAGCGGCCCCCTCCACCAATG-CCTTCCTATCCTGATCGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTCTCCATGTTCAGTCTTCTGTGACTAACTACTAAGATTGGG]

[+] EMBL AK065016             [CACAGAATGCATCCCCATCCCAAGCCTCTCAGGGCGCAGGCTCCGGCGAACCCAACCCTAGTCCGGTAGCCCCCGACGCCGCCCCACCGCGCCGACGCCGCGCATCCTCCCCGCGGCCCTCGGAGGCATCTCCTCGCCCGTCGTCCCTCGGCGCCTCGCCATCGCCGGCGGTCTGCCTCCGCTGCTCGGCGGCTCGCCCGACGCACCCACGAGTATCTTCCCCTTCCCTGGCGTAAAAGAAAATCTCCCGTCTCGTCTCCTCCGCTCTTTGCGCCGTCTCGCTGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGCCGAGCAGAGCAGGAGAGGGGATCCTGGTCATCATTTGTTGAAAAATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATTCCATTGCTAGAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCCTTGCAATTGCAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAGAAGTCGTACAAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGAATCCTGTAGGCTTATTGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGTGCTTTCCTGAACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTGCGACAAAAATATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAAAAGGTAAGAA CCTCAACCAATGACATGAATGCGTTGTGTGCTTCAGAGGAGAATACAACTGCTAGTGGGCTGGGTGAACCATCTGAAGCTTCACCTGTTGATGTTAAGCCACGTCCTGTATTGAAGCAACTATGTGAGCAGATGGATACAGCAGGCCTTCTGAAATTTCTTTCAGAAAATTGGAAAAAACTTTCTAGCCTTCGTGATGAACTTTCTGCTGCACTAAGATGTGCTACTGACCCTGCACGCTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAATAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAACACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGAGCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGCTTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGTTGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAAGCAGACTGCTGAGCTTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGATATTATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCTTTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAAAAGATTCACTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAAGACTCGGGAACTACTTGCATTGAGGGCTGTAATAAAATGCATTGAAGAGTATAAGCTTCAGAAGGACTATCCTCTTGGACCTCTCCAGAAGCGTGTTGCTGAGCTAAAATCTAAGGGTGAGAAAAGGCCATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCACTTTCGGCAATTCAGCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTTGGCAGCGGCCCCCTCCACCAATG CCTTCCTATCCTGATCGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTG                                              ]
[+] EMBL CB627494             [                                                 ACCCAACCCTAGTCCGGTAGCCCCCGACGCCGCCCCACCGCGCCGACGCCGCGCATCCTCCCCGCGGCCCTCGGAGGCATCTCCTCGCCCGTCGTCCCTCGGCGCCTCGCCATCGCCGGCGGTCTGCCTCCGCTGCTCGGCGGCTCGCCCGACGCACCCACGAGTATCTTCCCCTTCCCTGGCGTAAAAGAAAATCTCCCGTCTCGTCTCCTCCGCTCTTTGCGCCGTCTCGCTGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGCCGAGCAGAGCAGGAGAGGGGATCCTGGTCATCATTTGTTGAAAAATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATTCCATTGCTAGAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCCTTGCAATTGCAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAGAAGTCGTACAAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGAATCCTGTAGGCTTATCGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGTGCTTTCCTGAACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTGCGACAAAAATATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAAAAGGTAAGAACCCTCAACCAtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB654375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAAGGCCATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCACTTTCGGCAATTCAGCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTTGGCAGCGGCCCCCTCCACCAATG CCTTCCTATCCTGATCGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTGTCCATGTTCAGTCTTCTGTGACTAACTACTcctagtagg]
[-] EMBL CB627495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCTCTTTCGGCAATTCAGCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTTGGCAGCGGCCCCCTCCACCAATGCCCTTCCTATCCTGATCGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTCTCCATGTTCAGTCTTCTGTGACTAACTACTAAGATTG  ]
[+] EMBL CA767051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                acaaggggGGGCGCCATAATGCAAAGAAGCCTCGCTCTTTCGGCAATTCAGCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTTGGCAGCGGCCCCCTCCACCAATG CCTTCCTATCCTGATCGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAGGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGGTGCGTGTACCTAACCTGGTTTGAATATTCTCCATGGTCAGTCTTCTGNGACTAACTACTAAGATTGG ]
[-] EMBL CB676077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGGCTGGTAGTTGGCAGCGGCCCCCTCCACCAATG CCTTCCTATCCTGATCGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTTTACTTCGAGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTC                                       ]
[-] EMBL D42520               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGTTATAACTTGCATTTGCTAT CTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACNCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTCTCCATGTTCAGTCTTCTGTGA                  ]




>consensus_11193#0
CACAGAATGCATCCCCATCCCAAGCCTCTCAGGGCGCAGGCTCCGGCGAACCCAACCCTA
GTCCGGTAGCCCCCGACGCCGCCCCACCGCGCCGACGCCGCGCATCCTCCCCGCGGCCCT
CGGAGGCATCTCCTCGCCCGTCGTCCCTCGGCGCCTCGCCATCGCCGGCGGTCTGCCTCC
GCTGCTCGGCGGCTCGCCCGACGCACCCACGAGTATCTTCCCCTTCCCTGGCGTAAAAGA
AAATCTCCCGTCTCGTCTCCTCCGCTCTTTGCGCCGTCTCGCTGCTGAACAGGGGAGGGG
CGGCGATCTCCATCTGCCGAGCAGAGCAGGAGAGGGGATCCTGGTCATCATTTGTTGAAA
AATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATTCCATTGCT
AGAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCCTTGCAATT
GCAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAGAAGTCGTA
CAAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGA
ATCCTGTAGGCTTATTGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGTGCTTTCCT
GAACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTGCGACAAAA
ATATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAAAAGGTAAG
AACCTCAACCAATGACATGAATGCGTTGTGTGCTTCAGAGGAGAATACAACTGCTAGTGG
GCTGGGTGAACCATCTGAAGCTTCACCTGTTGATGTTAAGCCACGTCCTGTATTGAAGCA
ACTATGTGAGCAGATGGATACAGCAGGCCTTCTGAAATTTCTTTCAGAAAATTGGAAAAA
ACTTTCTAGCCTTCGTGATGAACTTTCTGCTGCACTAAGATGTGCTACTGACCCTGCACG
CTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAA
TAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAAC
ACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGA
GCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGC
TTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGT
TGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAA
GCAGACTGCTGAGCTTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGATATTATCA
AGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCTTTGGGC
TTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAAAAGATT
CACTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAAGACTCGGG
AACTACTTGCATTGAGGGCTGTAATAAAATGCATTGAAGAGTATAAGCTTCAGAAGGACT
ATCCTCTTGGACCTCTCCAGAAGCGTGTTGCTGAGCTAAAATCTAAGGGTGAGAAAAGGC
CATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCACTTTCGGCAATTCAGCTGCTC
GCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTT
GGCAGCGGCCCCCTCCACCAATGCCTTCCTATCCTGATCGATATGGACATGCAGATCGGT
ACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAAC
CATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACA
ACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCT
ACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTG
GTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGGTTATGAT
AAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACCTTTAGAT
ATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGGCTGGTCG
TGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATCCAGTTGA
ATACTGTTGCGTGTACCTAACCTGTTTTGAATATTCTCCATGTTCAGTCTTCTGTGACTA
ACTACTAAGATTGGG

consensusID : consensus_11193#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence 
                              [TGCACTCTTATGTGCTACTGACCCTGCACGCTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAATAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAACACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGAGCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGCTTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGTTGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAAGCAGACTGCTGAGCTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGGTTGGTATCCCCTCAGAATGCCACAAGGCGTTCACATCCCTTAAACCAGACCACAGCCATTCCTGATTTATTACTAAGCCACAGAGCTTTCTAGGGAATTGAAACCTTCCTGCTTTATGTGAAAACCTGGTAATTTGCATAAGTTTGGAAATTTATGATCCTTCTGTTGACAATATTTTGCAGATATTATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCTTTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAAAAGATTCACTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAGACTCGGGG]

[+] EMBL CB676076             [TGCACTCTTATGTGCTACTGACCCTGCACGCTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAATAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAACACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGAGCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGCTTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGTTGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAAGCAGACTGCTGAGCTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGGTTGGTATCCCCTCAGAATGCCACAAGGCGTTCACATCCCTTAAACCAGACCACAGCCATTCCTGATTTATTACTAAGCCACAGAGCTTTCTAGGGAATTGAAACCTTCCTGCTTTATGTGAAAACCTGGTAATTTGCATAAGTTTGGAAATTTATGATCCTTCTGTTGACAATATTTTGCAGATATTATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCTTTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAAAAGATTCACTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAGACTCGGGG]




>consensus_11193#1
TGCACTCTTATGTGCTACTGACCCTGCACGCTTTGTGCTTGGTTCCTTGGAGGGTTTCTT
CCCATCTGACCATACTAGTTCACCTGGGAATAAACAGATTATTCTCCAAGGCCAGCGTAG
AAGCTGCATTATTTTGATGGAAGCTATAACACCTGCACTAGCTACGAAGGAGCCAGGTGA
CAACCACCCTTGGAGCTCTGAAATTAGGGAGCTGGCCAAGGCGATTGCAGAAGAGTGGAA
GAGTAAGCTAGCTGAGGTTGACCTCGATGCTTCTGATGGCTACTCATTGGAAGCACAGGC
ATTCCTGCAGCTTCTTACAACATTTAATGTTGATTCGGTGCTTGACGAGGATGAACTATG
CAAGCTTGTAGTTGCCGTCTCTCGTCGCAAGCAGACTGCTGAGCTTTGTCGCTCCCTTTG
TCTTAATGAGAGAATACCAGGTTGGTATCCCCTCAGAATGCCACAAGGCGTTCACATCCC
TTAAACCAGACCACAGCCATTCCTGATTTATTACTAAGCCACAGAGCTTTCTAGGGAATT
GAAACCTTCCTGCTTTATGTGAAAACCTGGTAATTTGCATAAGTTTGGAAATTTATGATC
CTTCTGTTGACAATATTTTGCAGATATTATCAAGGAATTGGTTAATAGACACAGGCAAAT
TGATGCAGTTCAATTTATACATGCCTTTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCT
GCTGAAGACATATGTGGAGGAATTAAAAGATTCACTTGGCAATAATGGGGATGGCAACGC
GGCTTCTCTGAAGGATGACCCAAGACTCGGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11193#0      CACAGAATGCATCCCCATCCCAAGCCTCTCAGGGCGCAGGCTCCGGCGAACCCAACCCTA 60
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GTCCGGTAGCCCCCGACGCCGCCCCACCGCGCCGACGCCGCGCATCCTCCCCGCGGCCCT 120
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CGGAGGCATCTCCTCGCCCGTCGTCCCTCGGCGCCTCGCCATCGCCGGCGGTCTGCCTCC 180
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GCTGCTCGGCGGCTCGCCCGACGCACCCACGAGTATCTTCCCCTTCCCTGGCGTAAAAGA 240
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      AAATCTCCCGTCTCGTCTCCTCCGCTCTTTGCGCCGTCTCGCTGCTGAACAGGGGAGGGG 300
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CGGCGATCTCCATCTGCCGAGCAGAGCAGGAGAGGGGATCCTGGTCATCATTTGTTGAAA 360
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      AATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATTCCATTGCT 420
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      AGAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCCTTGCAATT 480
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GCAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAGAAGTCGTA 540
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CAAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGA 600
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      ATCCTGTAGGCTTATTGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGTGCTTTCCT 660
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GAACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTGCGACAAAA 720
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      ATATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAAAAGGTAAG 780
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      AACCTCAACCAATGACATGAATGCGTTGTGTGCTTCAGAGGAGAATACAACTGCTAGTGG 840
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GCTGGGTGAACCATCTGAAGCTTCACCTGTTGATGTTAAGCCACGTCCTGTATTGAAGCA 900
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      ACTATGTGAGCAGATGGATACAGCAGGCCTTCTGAAATTTCTTTCAGAAAATTGGAAAAA 960
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      ACTTTCTAGCCTTCGTGATGAACTTTCTGCTGCACTAAGATGTGCTACTGACCCTGCACG 1020
consensus_11193#1      ------------------------------TGCACTCTTATGTGCTACTGACCCTGCACG 30
                                                     ******   *********************

consensus_11193#0      CTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAA 1080
consensus_11193#1      CTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAA 90
                       ************************************************************

consensus_11193#0      TAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAAC 1140
consensus_11193#1      TAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAAC 150
                       ************************************************************

consensus_11193#0      ACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGA 1200
consensus_11193#1      ACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGA 210
                       ************************************************************

consensus_11193#0      GCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGC 1260
consensus_11193#1      GCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGC 270
                       ************************************************************

consensus_11193#0      TTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGT 1320
consensus_11193#1      TTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGT 330
                       ************************************************************

consensus_11193#0      TGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAA 1380
consensus_11193#1      TGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAA 390
                       ************************************************************

consensus_11193#0      GCAGACTGCTGAGCTTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGAT----ATT 1436
consensus_11193#1      GCAGACTGCTGAGCTTT-GTCGCTCCCTTTGTCTTAATGAGAGAATACCAGGTTGGTATC 449
                       ***************** ********************************* *    ** 

consensus_11193#0      ATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCA-ATTTATACATGCCTT 1495
consensus_11193#1      CCCTCAGAATGCCACAAGGCGTTCACATCCCTTAAACCAGACCACAGCCATTCCTGATTT 509
                         *   ****     **      **      ** *  ***  ** *   ** * **  **

consensus_11193#0      TGGGCTT--TCTGAGAGCTTCCCTC----CTGCACCTCTGCTGAAGACATATGTGGAGGA 1549
consensus_11193#1      ATTACTAAGCCACAGAGCTTTCTAGGGAATTGAAACCTTCCTGC---TTTATGTGAAAAC 566
                           **    *  ******* *        ** * *  * ***      ****** *   

consensus_11193#0      ATTAAAAGATTCAC----TTGGCAATA-ATGGGGATGGCAACGCGGCTTCTCTGAAGGAT 1604
consensus_11193#1      CTGGTAATTTGCATAAGTTTGGAAATTTATGATCCTTCTGTTGACAATATTTTGCAGATA 626
                        *   **  * **     **** ***  ***    *      *    *  * ** **   

consensus_11193#0      GACCCAAAGACTCGGGAACTACTTGCATTGAGG--GCTGTAATAAAATGCATTGAAGAGT 1662
consensus_11193#1      TTATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCT 686
                           *** ** * **  * **    **   *    * ** * *  ***  **  * *  *

consensus_11193#0      ATAAGCTTCAGAAGGACTATCCTCTTGGACCTCTCCAGAAG---CGTGTTGCTGAGCTAA 1719
consensus_11193#1      TTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAA 746
                        *  ****    **  **  **** ** ****** * ****     *** *  **  ***

consensus_11193#0      AATCTAAGGGTGAGAA-AAGGCCATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGC 1778
consensus_11193#1      AAGATTCACTTGGCAATAATGGGGATGGCAACGCGGCTTCTC--TGAAGGATGACCCAAG 804
                       **  *     **  ** ** *    *** * *  ***  *    ** *      **    

consensus_11193#0      ACTTTCGGCAATTCAGCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGA 1838
consensus_11193#1      ACTCGGGG---------------------------------------------------- 812
                       ***   **                                                    

consensus_11193#0      CCTTCAGGCCCGGCTGGTACTTGGCAGCGGCCCCCTCCACCAATGCCTTCCTATCCTGAT 1898
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CGATATGGACATGCAGATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCT 1958
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GCTTATGCTTCTTACAGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGC 2018
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      TCAGTAGCTCCTGCATCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGT 2078
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GCCCCGCCAACAGCAGGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCG 2138
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      AGTAGCTATTCGGGTTATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTT 2198
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      GCTATGCTACGCTGGTTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAG 2258
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      ACCCCAGATGTAACCTTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGAT 2318
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CTTGATCTTCCAAGGCTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGT 2378
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CCTGCTACATGTATCCAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTCTC 2438
consensus_11193#1      ------------------------------------------------------------
                                                                                   

consensus_11193#0      CATGTTCAGTCTTCTGTGACTAACTACTAAGATTGGG 2475
consensus_11193#1      -------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)