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Oryza sativa
cluster # 112 cluster # 112       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_112#0 length = 2718 sequences # 1  
 consensus_112#1 length = 995 sequences # 1  
consensusID : consensus_112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2718
fasta sequence 
                              [TTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGCCACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCGCCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCTCAGCCTTCTTACGGCGGCCATGGAGGCAATGGCCAAGGCGGCAGTGGCCGCGATGGCGTTGGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGGCGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGGCTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTGTGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCGGATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTCCAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCCGCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCCTGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTCCGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATCCCCCGAAATCAGGCCGAACTGCTTATCCCGAAAATTGGGGTTTTGGGGGGCGGCGCGGCGACGGACCAGCGCGACGATGGACCAGCGATTCAGCGGCGACTGGATGGCTGGCGGCGGTACAGAGATAGCAGCTCGTTCCTTCCTCCAGTGATGACTCCTCCCCTTCCTCCAGCGATGGCTCCTCTCTCAACAGCATGTGTTCCTGAAGCAGAAGTAATCGATTTGGAGTCGGCTGAATGCAGGAGCGGGGCAACCATGGCAAAATCGACGGGCCATAGCAGTGGATTTCATCCAAAGCAGCAGGGTCACAGGAAAATCAGTTTGTCACCACAGTCCAAGGCTTTGAAGGTTTCTGGCACAAGAGGCAGCCTAAATAAGACTGTTGCACGGGTGGTATCCAGGTGTCAGCCCAAATGCGTAGTGAATATCATTAAAGAATTCGATGATAGGAAGGAGGAGTTGATTGGTGAAATTGGATTTGATGGACTTTTGGATATCAAGCTTACTAAGGTAAACAGGCAGTTTGGGGCATGGCTACTAAGCAAAGTTGATCCGAAATCATGCGCTACTGTTAAAGATGTCAACCAGGAGTTGCCATTCGGTTCCAATGATGTGAATGCAGTTTTTGGCTTGCCATGCTCAGGTCAACCTATTATCCCTTGCTCTCAAGATGAATTGGATGGGAAGAAACAAATATTGTGTGAAATATTTAAGATACCAAACTTTTCACACCTGAAAATATCACTCTTAAAGAGAATCCTAAAGAAGCAGTATGGTTATCCCATGACAATAGATGAAAAGAGGGTTTTCATGGCGGCTTTTGTGCTTTATGTCACAACGAAGCTTTTGGCACCGCAATCCTGTGCAAACTTCATATCTCCTAGGTCTATTATGGCTGTTTCTGATGTTGACAATATAAAACAGTACAACTGGTCCCAATTCGTTGTAGATGAGGTGAAGAAAGCAGCAGAATCAATGCCCACCTGCTTTCCGAATAAGGCTCAACTATCCATTAACGGGTGTATCATCTTTCTAATGGTAAAATACTTGAGAAATCTCCTGTTCCGGAAGGTTGGGATCACATGTGTTAAAACATGTCACATTTCTCAGTTTGAGGATGATCAAATTGCTAGGATGATTCAACAAGATGTAGTTAGTAAACATAACCCAGGATTCCCCTTCCCTCGTTATGGGAAACTCCAGTTGGTGAAGGATCCAAGAGAAAACAACCCCCATGTGCCAGAGCTATCTCCCCTAAACTTATGCTCCTGTTCGAAGATCCCATCTAGAGCCATTGATGGCGGTAAAAATTTAATAAAATTCCTGGTTTCACACTTCTCTTCGTTAGACGTACATAGAAGTGTCGGGTCACAGGCATACGAGGAGTTGAAATCTTCCGTTCAGGATGGATTCGATCGGATCGATAAGATTTTGCCTACCATATCAGATTTCGTCGACATAAGCACCATGCAAACTGCTATTCACGCATCTAACCTATTCAAGAGAGCTTTCAAGACTAATATTACAGTGGCAGTTAAGATAGTGATAAGGGCAGCAATAACGAAAGTTATTGATACCATTGAGGATATACAAGGGCCTCTCCATCCATGGGGAGACACAACTGCCATGGGATACCACACACCCACAAACTACTCCACACATGCTACAAAAGATGCTAGTCAATTGGACCAACCAACCAACACGGTCAAACGTTAAACGTTAAACGTGAATAGTGTAAAACTGCACTTATTTTGGATGGAGGAAGTATATCTTTAGGCCGTGTTTAGTTGCAAATTTTTTCTTCAAACTTTTAACTTTTTCATCACATCA]

[+] EMBL AK070683             [TTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGCCACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCGCCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCTCAGCCTTCTTACGGCGGCCATGGAGGCAATGGCCAAGGCGGCAGTGGCCGCGATGGCGTTGGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGGCGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGGCTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTGTGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCGGATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTCCAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCCGCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCCTGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTCCGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATCCCCCGAAATCAGGCCGAACTGCTTATCCCGAAAATTGGGGTTTTGGGGGGCGGCGCGGCGACGGACCAGCGCGACGATGGACCAGCGATTCAGCGGCGACTGGATGGCTGGCGGCGGTACAGAGATAGCAGCTCGTTCCTTCCTCCAGTGATGACTCCTCCCCTTCCTCCAGCGATGGCTCCTCTCTCAACAGCATGTGTTCCTGAAGCAGAAGTAATCGATTTGGAGTCGGCTGAATGCAGGAGCGGGGCAACCATGGCAAAATCGACGGGCCATAGCAGTGGATTTCATCCAAAGCAGCAGGGTCACAGGAAAATCAGTTTGTCACCACAGTCCAAGGCTTTGAAGGTTTCTGGCACAAGAGGCAGCCTAAATAAGACTGTTGCACGGGTGGTATCCAGGTGTCAGCCCAAATGCGTAGTGAATATCATTAAAGAATTCGATGATAGGAAGGAGGAGTTGATTGGTGAAATTGGATTTGATGGACTTTTGGATATCAAGCTTACTAAGGTAAACAGGCAGTTTGGGGCATGGCTACTAAGCAAAGTTGATCCGAAATCATGCGCTACTGTTAAAGATGTCAACCAGGAGTTGCCATTCGGTTCCAATGATGTGAATGCAGTTTTTGGCTTGCCATGCTCAGGTCAACCTATTATCCCTTGCTCTCAAGATGAATTGGATGGGAAGAAACAAATATTGTGTGAAATATTTAAGATACCAAACTTTTCACACCTGAAAATATCACTCTTAAAGAGAATCCTAAAGAAGCAGTATGGTTATCCCATGACAATAGATGAAAAGAGGGTTTTCATGGCGGCTTTTGTGCTTTATGTCACAACGAAGCTTTTGGCACCGCAATCCTGTGCAAACTTCATATCTCCTAGGTCTATTATGGCTGTTTCTGATGTTGACAATATAAAACAGTACAACTGGTCCCAATTCGTTGTAGATGAGGTGAAGAAAGCAGCAGAATCAATGCCCACCTGCTTTCCGAATAAGGCTCAACTATCCATTAACGGGTGTATCATCTTTCTAATGGTAAAATACTTGAGAAATCTCCTGTTCCGGAAGGTTGGGATCACATGTGTTAAAACATGTCACATTTCTCAGTTTGAGGATGATCAAATTGCTAGGATGATTCAACAAGATGTAGTTAGTAAACATAACCCAGGATTCCCCTTCCCTCGTTATGGGAAACTCCAGTTGGTGAAGGATCCAAGAGAAAACAACCCCCATGTGCCAGAGCTATCTCCCCTAAACTTATGCTCCTGTTCGAAGATCCCATCTAGAGCCATTGATGGCGGTAAAAATTTAATAAAATTCCTGGTTTCACACTTCTCTTCGTTAGACGTACATAGAAGTGTCGGGTCACAGGCATACGAGGAGTTGAAATCTTCCGTTCAGGATGGATTCGATCGGATCGATAAGATTTTGCCTACCATATCAGATTTCGTCGACATAAGCACCATGCAAACTGCTATTCACGCATCTAACCTATTCAAGAGAGCTTTCAAGACTAATATTACAGTGGCAGTTAAGATAGTGATAAGGGCAGCAATAACGAAAGTTATTGATACCATTGAGGATATACAAGGGCCTCTCCATCCATGGGGAGACACAACTGCCATGGGATACCACACACCCACAAACTACTCCACACATGCTACAAAAGATGCTAGTCAATTGGACCAACCAACCAACACGGTCAAACGTTAAACGTTAAACGTGAATAGTGTAAAACTGCACTTATTTTGGATGGAGGAAGTATATCTTTAGGCCGTGTTTAGTTGCAAATTTTTTCTTCAAACTTTTAACTTTTTCATCACATCA]




>consensus_112#0
TTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACC
TCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCC
CCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGCCACCTCCCTGCC
TCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCGCCCTGGGCCACC
TCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCTCAGCCTTCTTAC
GGCGGCCATGGAGGCAATGGCCAAGGCGGCAGTGGCCGCGATGGCGTTGGCGAAGGTGGC
CATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGGCGGCCACGATAC
TGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGGCTCGAGGGCGAC
GGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTGTGGCGAGGATGG
TGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCGGATCTGGTGGTG
AGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTCCAAGCATACTTC
ATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCCGCTCGTGGGAGC
CGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCCTGGCTCCCTCAA
CACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTCCGCCGCTTGCCG
AGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATCCCCCGAAATCAG
GCCGAACTGCTTATCCCGAAAATTGGGGTTTTGGGGGGCGGCGCGGCGACGGACCAGCGC
GACGATGGACCAGCGATTCAGCGGCGACTGGATGGCTGGCGGCGGTACAGAGATAGCAGC
TCGTTCCTTCCTCCAGTGATGACTCCTCCCCTTCCTCCAGCGATGGCTCCTCTCTCAACA
GCATGTGTTCCTGAAGCAGAAGTAATCGATTTGGAGTCGGCTGAATGCAGGAGCGGGGCA
ACCATGGCAAAATCGACGGGCCATAGCAGTGGATTTCATCCAAAGCAGCAGGGTCACAGG
AAAATCAGTTTGTCACCACAGTCCAAGGCTTTGAAGGTTTCTGGCACAAGAGGCAGCCTA
AATAAGACTGTTGCACGGGTGGTATCCAGGTGTCAGCCCAAATGCGTAGTGAATATCATT
AAAGAATTCGATGATAGGAAGGAGGAGTTGATTGGTGAAATTGGATTTGATGGACTTTTG
GATATCAAGCTTACTAAGGTAAACAGGCAGTTTGGGGCATGGCTACTAAGCAAAGTTGAT
CCGAAATCATGCGCTACTGTTAAAGATGTCAACCAGGAGTTGCCATTCGGTTCCAATGAT
GTGAATGCAGTTTTTGGCTTGCCATGCTCAGGTCAACCTATTATCCCTTGCTCTCAAGAT
GAATTGGATGGGAAGAAACAAATATTGTGTGAAATATTTAAGATACCAAACTTTTCACAC
CTGAAAATATCACTCTTAAAGAGAATCCTAAAGAAGCAGTATGGTTATCCCATGACAATA
GATGAAAAGAGGGTTTTCATGGCGGCTTTTGTGCTTTATGTCACAACGAAGCTTTTGGCA
CCGCAATCCTGTGCAAACTTCATATCTCCTAGGTCTATTATGGCTGTTTCTGATGTTGAC
AATATAAAACAGTACAACTGGTCCCAATTCGTTGTAGATGAGGTGAAGAAAGCAGCAGAA
TCAATGCCCACCTGCTTTCCGAATAAGGCTCAACTATCCATTAACGGGTGTATCATCTTT
CTAATGGTAAAATACTTGAGAAATCTCCTGTTCCGGAAGGTTGGGATCACATGTGTTAAA
ACATGTCACATTTCTCAGTTTGAGGATGATCAAATTGCTAGGATGATTCAACAAGATGTA
GTTAGTAAACATAACCCAGGATTCCCCTTCCCTCGTTATGGGAAACTCCAGTTGGTGAAG
GATCCAAGAGAAAACAACCCCCATGTGCCAGAGCTATCTCCCCTAAACTTATGCTCCTGT
TCGAAGATCCCATCTAGAGCCATTGATGGCGGTAAAAATTTAATAAAATTCCTGGTTTCA
CACTTCTCTTCGTTAGACGTACATAGAAGTGTCGGGTCACAGGCATACGAGGAGTTGAAA
TCTTCCGTTCAGGATGGATTCGATCGGATCGATAAGATTTTGCCTACCATATCAGATTTC
GTCGACATAAGCACCATGCAAACTGCTATTCACGCATCTAACCTATTCAAGAGAGCTTTC
AAGACTAATATTACAGTGGCAGTTAAGATAGTGATAAGGGCAGCAATAACGAAAGTTATT
GATACCATTGAGGATATACAAGGGCCTCTCCATCCATGGGGAGACACAACTGCCATGGGA
TACCACACACCCACAAACTACTCCACACATGCTACAAAAGATGCTAGTCAATTGGACCAA
CCAACCAACACGGTCAAACGTTAAACGTTAAACGTGAATAGTGTAAAACTGCACTTATTT
TGGATGGAGGAAGTATATCTTTAGGCCGTGTTTAGTTGCAAATTTTTTCTTCAAACTTTT
AACTTTTTCATCACATCA

consensusID : consensus_112#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 995
fasta sequence 
                              [TCCTGTCCTCGTTTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGCCACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCGCCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCTCAGCCTTCTTACGGCGGCCATGGAGGCAATGGTCAAGGCGGCAGTGGCCGCGATGGCGTTGGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGGCGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGGCTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTGTGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCGGATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTCCAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCCGCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCCTGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTCCGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATCCCCCGAAATCAGGTTGGATCTCATCTCATCTCACCAATTGCTCCGTAGCAATCTTGTGGAATCCTAGTTGTATTTATGGGGTTGATTTCATCCGT]

[+] EMBL AK121926             [TCCTGTCCTCGTTTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGCCACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCGCCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCTCAGCCTTCTTACGGCGGCCATGGAGGCAATGGTCAAGGCGGCAGTGGCCGCGATGGCGTTGGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGGCGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGGCTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTGTGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCGGATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTCCAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCCGCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCCTGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTCCGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATCCCCCGAAATCAGGTTGGATCTCATCTCATCTCACCAATTGCTCCGTAGCAATCTTGTGGAATCCTAGTTGTATTTATGGGGTTGATTTCATCCGT]




>consensus_112#1
TCCTGTCCTCGTTTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCC
TCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCA
TCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGC
CACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCG
CCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCT
CAGCCTTCTTACGGCGGCCATGGAGGCAATGGTCAAGGCGGCAGTGGCCGCGATGGCGTT
GGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGG
CGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGG
CTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTG
TGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCG
GATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTC
CAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCC
GCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCC
TGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTC
CGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATC
CCCCGAAATCAGGTTGGATCTCATCTCATCTCACCAATTGCTCCGTAGCAATCTTGTGGA
ATCCTAGTTGTATTTATGGGGTTGATTTCATCCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_112#0      ------------TTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCC 48
consensus_112#1      TCCTGTCCTCGTTTCCTCTCCTTTCTCATCGTAGCCTTCTCCCTCTCGGCCATCGGCGCC 60
                                 ************************************************

consensus_112#0      TCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCA 108
consensus_112#1      TCCCCCTCAACCTCACCCTCCACCCCTCCCTTCTCATCGTAGCCTTCTCCCTCTCGGCCA 120
                     ************************************************************

consensus_112#0      TCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGC 168
consensus_112#1      TCGGCGCCTCCCCCTCAACCTCACCGGCGCCTCCCCCTCAACCTCACCCTCCACTCGTGC 180
                     ************************************************************

consensus_112#0      CACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCG 228
consensus_112#1      CACCTCCCTGCCTCAACCACGACGTCCGACGTGCTGCCCCCAACTCCACCTTGGCCTCCG 240
                     ************************************************************

consensus_112#0      CCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCT 288
consensus_112#1      CCCTGGGCCACCTCCCTGAGTCGACTGCATCCTCCATCAGCGTCGCCGCCAACTCAACCT 300
                     ************************************************************

consensus_112#0      CAGCCTTCTTACGGCGGCCATGGAGGCAATGGCCAAGGCGGCAGTGGCCGCGATGGCGTT 348
consensus_112#1      CAGCCTTCTTACGGCGGCCATGGAGGCAATGGTCAAGGCGGCAGTGGCCGCGATGGCGTT 360
                     ******************************** ***************************

consensus_112#0      GGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGG 408
consensus_112#1      GGCGAAGGTGGCCATGGCGGTGACAGCCCCGCGACAGCTGCGACGGCCAAGGCGTGCAGG 420
                     ************************************************************

consensus_112#0      CGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGG 468
consensus_112#1      CGGCCACGATACTGGTGAGCAGTGGTAGGCGTGTGGGCGGCGGATCCGGCGGTGGGGAGG 480
                     ************************************************************

consensus_112#0      CTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTG 528
consensus_112#1      CTCGAGGGCGACGGTGGGGCTGGTGGGCAGTGGATTCGGTGTTGGGAGGCGCGCAGGCTG 540
                     ************************************************************

consensus_112#0      TGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCG 588
consensus_112#1      TGGCGAGGATGGTGGGCGGCGGGGGAGGTGGGCGGGCGGTGGCGAGGCTGGTGGGCGGCG 600
                     ************************************************************

consensus_112#0      GATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTC 648
consensus_112#1      GATCTGGTGGTGAGGGAGGCTCAAGGGCGTGTATCCGGCGTCTTAGTTCTAGCCGACTTC 660
                     ************************************************************

consensus_112#0      CAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCC 708
consensus_112#1      CAAGCATACTTCATCCCGCCTCCCGAAGTTACCGCCGTCGCCTACTTCCTCGACATCGCC 720
                     ************************************************************

consensus_112#0      GCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCC 768
consensus_112#1      GCTCGTGGGAGCCGCCGCTGCGAGGAATTGCCTCATGGTTTGTCGCCTTCGTCGATTTCC 780
                     ************************************************************

consensus_112#0      TGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTC 828
consensus_112#1      TGGCTCCCTCAACACCCGGACACCCAAGCGCCTTGCCGGTGAGGGCCGCCGCCAAGCTTC 840
                     ************************************************************

consensus_112#0      CGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATC 888
consensus_112#1      CGCCGCTTGCCGAGGCCGTGCACTGCCACTTGGAGCTTGACACCGCAAGTCAAAGCCATC 900
                     ************************************************************

consensus_112#0      CCCCGAAATCAGGCCGAACTGCTTATCCCGAAAATTGGGGTTTTGGGGGGCGGCGCGGCG 948
consensus_112#1      CCCCGAAATCAGGTTGGAT--CTCATCTCATCTCACCAATTGCTCCGTAGCAATCTTGTG 958
                     *************  * *   ** *** *           *  *  *  **      * *

consensus_112#0      ACGGACCAGC-GCGACGATGGACCAGCGATTCAGCGGCGACTGGATGGCTGGCGGCGGTA 1007
consensus_112#1      GAATCCTAGTTGTATTTATGGGGTTG-ATTTCATCCGT---------------------- 995
                          * **  *     ****    *   **** * *                       

consensus_112#0      CAGAGATAGCAGCTCGTTCCTTCCTCCAGTGATGACTCCTCCCCTTCCTCCAGCGATGGC 1067
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TCCTCTCTCAACAGCATGTGTTCCTGAAGCAGAAGTAATCGATTTGGAGTCGGCTGAATG 1127
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CAGGAGCGGGGCAACCATGGCAAAATCGACGGGCCATAGCAGTGGATTTCATCCAAAGCA 1187
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      GCAGGGTCACAGGAAAATCAGTTTGTCACCACAGTCCAAGGCTTTGAAGGTTTCTGGCAC 1247
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      AAGAGGCAGCCTAAATAAGACTGTTGCACGGGTGGTATCCAGGTGTCAGCCCAAATGCGT 1307
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      AGTGAATATCATTAAAGAATTCGATGATAGGAAGGAGGAGTTGATTGGTGAAATTGGATT 1367
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TGATGGACTTTTGGATATCAAGCTTACTAAGGTAAACAGGCAGTTTGGGGCATGGCTACT 1427
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      AAGCAAAGTTGATCCGAAATCATGCGCTACTGTTAAAGATGTCAACCAGGAGTTGCCATT 1487
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CGGTTCCAATGATGTGAATGCAGTTTTTGGCTTGCCATGCTCAGGTCAACCTATTATCCC 1547
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TTGCTCTCAAGATGAATTGGATGGGAAGAAACAAATATTGTGTGAAATATTTAAGATACC 1607
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      AAACTTTTCACACCTGAAAATATCACTCTTAAAGAGAATCCTAAAGAAGCAGTATGGTTA 1667
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TCCCATGACAATAGATGAAAAGAGGGTTTTCATGGCGGCTTTTGTGCTTTATGTCACAAC 1727
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      GAAGCTTTTGGCACCGCAATCCTGTGCAAACTTCATATCTCCTAGGTCTATTATGGCTGT 1787
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TTCTGATGTTGACAATATAAAACAGTACAACTGGTCCCAATTCGTTGTAGATGAGGTGAA 1847
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      GAAAGCAGCAGAATCAATGCCCACCTGCTTTCCGAATAAGGCTCAACTATCCATTAACGG 1907
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      GTGTATCATCTTTCTAATGGTAAAATACTTGAGAAATCTCCTGTTCCGGAAGGTTGGGAT 1967
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CACATGTGTTAAAACATGTCACATTTCTCAGTTTGAGGATGATCAAATTGCTAGGATGAT 2027
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TCAACAAGATGTAGTTAGTAAACATAACCCAGGATTCCCCTTCCCTCGTTATGGGAAACT 2087
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CCAGTTGGTGAAGGATCCAAGAGAAAACAACCCCCATGTGCCAGAGCTATCTCCCCTAAA 2147
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CTTATGCTCCTGTTCGAAGATCCCATCTAGAGCCATTGATGGCGGTAAAAATTTAATAAA 2207
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      ATTCCTGGTTTCACACTTCTCTTCGTTAGACGTACATAGAAGTGTCGGGTCACAGGCATA 2267
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CGAGGAGTTGAAATCTTCCGTTCAGGATGGATTCGATCGGATCGATAAGATTTTGCCTAC 2327
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CATATCAGATTTCGTCGACATAAGCACCATGCAAACTGCTATTCACGCATCTAACCTATT 2387
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      CAAGAGAGCTTTCAAGACTAATATTACAGTGGCAGTTAAGATAGTGATAAGGGCAGCAAT 2447
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      AACGAAAGTTATTGATACCATTGAGGATATACAAGGGCCTCTCCATCCATGGGGAGACAC 2507
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      AACTGCCATGGGATACCACACACCCACAAACTACTCCACACATGCTACAAAAGATGCTAG 2567
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TCAATTGGACCAACCAACCAACACGGTCAAACGTTAAACGTTAAACGTGAATAGTGTAAA 2627
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      ACTGCACTTATTTTGGATGGAGGAAGTATATCTTTAGGCCGTGTTTAGTTGCAAATTTTT 2687
consensus_112#1      ------------------------------------------------------------
                                                                                 

consensus_112#0      TCTTCAAACTTTTAACTTTTTCATCACATCA 2718
consensus_112#1      -------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)