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Oryza sativa
cluster # 11201 cluster # 11201       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11201#0 length = 1338 sequences # 2  
consensus_11201#1 length = 945 sequences # 4  
consensus_11201#2 length = 183 sequences # 1  
consensus_11201#3 length = 117 sequences # 1  

consensusID : consensus_11201#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1338
fasta sequence
                              [TTTTTTTTTTTTTGCGGGGAATCCTGTAGCAAATTTTGCCTTCAAATTAATCTAGTTTTGTACTGACGTGGGAAATTGTGTCTATATTCTGATAGAACTCGGTAAGAGTCAGGTTGTGACTTGATGAGACCATATCTTGGTTCCCCTTAAACCCTGGATTGGCTTGTTCTTTTTTGTCCTGAATCGAATAGTTTCTTGCTACGGTTTCTGTCATAAATTTACCAATATGAGCAAATCATGTAGCGCTCTCAACTATGGTTGCCTCAAAATGGATCCTGTATGCATATCACTACTTGCCAGTAGGTTTGATTTTAGTGCATAGGTGTGTATGGTAGTAACAGATTAATGGTGGTAGTTCAACTTCTTCCCTGCTATTGCTAGATTGATGGGCTACTTTTTTGTTGCCATTCCTGACTGCTCAATGTGGTTCAGTTTTGGACTGGATCTACGTAGAGGGAATTCTCTCCTATCTTTTCATATATTACATTGTTTCATAAGAGTCCTATAATTTCATATCAAGATTTT-CCCATACCTGTACACGTGCTAGTGCTTTTATCTTGACTCGCCTTTTCCTCCTGAGCATGGATTCTAGGAAATTGGATGTTACTTTGCTTCTGT-ACCATGCTTGCTTA-TTTTACCAAATTACATTTTAGTTTATTGCTTAAGGTTGTCATGATTGATAAGGNCGATTTTGGAAACTAAAATACTTGGAAGTACTTTTCTGAGTAGGACGATAAATATACTAAGTAGATTTTGCTTACCTTCTTCTGCCATTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGACAGAAGCCAAGACCGCTTCAGCAGCAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACCTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCGGTGAACAGTGATCCAACACAATCAGTTCATGTCTATCCGACCATTTTAATTGCACTGATTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGGCAGTAAGAAATAGTCAGTCTGTTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGTCTATTTGCCCCTTGTCTC]

[+] EMBL CA761025             [TTTTTTTTTTTTTGCGGGGAATCCTGTAGCAAATTTTGCCTTCAAATTAATCTAGTTTTGTACTGACGTGGGAAATTGTGTCTATATTCTGATAGAACTCGGTAAGAGTCAGGTTGTGACTTGATGAGACCATATCTTGGTTCCCCTTAAACCCTGGATTGGCTTGTTCTTTTTTGTCCTGAATCGAATAGTTTCTTGCTACGGTTTCTGTCATAAATTTACCAATATGAGCAAATCATGTAGCGCTCTCAACTATGGTTGCCTCAAAATGGATCCTGTATGCATATCACTACTTGCCAGTAGGTTTGATTTTAGTGCATAGGTGTGTATGGTAGTAACAGATTAATGGTGGTAGTTCAACTTCTTCCCTGCTATTGCTAGATTGATGGGCTACTTTTTTGTTGCCATTCCTGACTGCTCAATGTGGTTCAGTTTTGGACTGGATCTACGTAGAGGGAATTCTCTCCTATCTTTTCATATATTACATTGTTTCATAAGAGTCCTATAATTTCATATCAAGATTTT CCCATACCTGTACACGTGCTAGTGCTTTTATCTTGACTCGCCTTTTCCTCCTGAGCATGGATTCTAGGAAATTGGATGTTACTTTGCTTCTGT ACCATGCTTGCTTA TTTTACCAAATTACATTTTAGTTTATTGCTTAAGGTTGTCATGATTGATAAGGNCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CA767608             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTGTTTCATAAGAGTCCTANANTTTCATATCAAGATTTTNCCCATACCTGTACACGTGCTAGTGCTTTTATCTTGACTCGCCTTTTCNTCCTGAGCATGGATTCTAGNAAATTGTATGTTACTTTGCTTCTGTAACCATGCTTGCTTATTTTTACCAAATTACATTTTAGTTTATTGCTTAAGGTTGTCATGATTGATAAGGTCGATTTTGGAAACTAAAATACTTGGAAGTACTTTTCTGAGTAGGACGATAAATATACTAAGTAGATTTTGCTTACCTTCTTCTGCCATTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGACAGAAGCCAAGACCGCTTCAGCAGCAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACCTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCGGTGAACAGTGATCCAACACAATCAGTTCATGTCTATCCGACCATTTTAATTGCACTGATTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGGCAGTAAGAAATAGTCAGTCTGTTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGTCTATTTGCCCCTTGTCTC]


>consensus_11201#0 TTTTTTTTTTTTTGCGGGGAATCCTGTAGCAAATTTTGCCTTCAAATTAATCTAGTTTTG TACTGACGTGGGAAATTGTGTCTATATTCTGATAGAACTCGGTAAGAGTCAGGTTGTGAC TTGATGAGACCATATCTTGGTTCCCCTTAAACCCTGGATTGGCTTGTTCTTTTTTGTCCT GAATCGAATAGTTTCTTGCTACGGTTTCTGTCATAAATTTACCAATATGAGCAAATCATG TAGCGCTCTCAACTATGGTTGCCTCAAAATGGATCCTGTATGCATATCACTACTTGCCAG TAGGTTTGATTTTAGTGCATAGGTGTGTATGGTAGTAACAGATTAATGGTGGTAGTTCAA CTTCTTCCCTGCTATTGCTAGATTGATGGGCTACTTTTTTGTTGCCATTCCTGACTGCTC AATGTGGTTCAGTTTTGGACTGGATCTACGTAGAGGGAATTCTCTCCTATCTTTTCATAT ATTACATTGTTTCATAAGAGTCCTATAATTTCATATCAAGATTTTCCCATACCTGTACAC GTGCTAGTGCTTTTATCTTGACTCGCCTTTTCCTCCTGAGCATGGATTCTAGGAAATTGG ATGTTACTTTGCTTCTGTACCATGCTTGCTTATTTTACCAAATTACATTTTAGTTTATTG CTTAAGGTTGTCATGATTGATAAGGNCGATTTTGGAAACTAAAATACTTGGAAGTACTTT TCTGAGTAGGACGATAAATATACTAAGTAGATTTTGCTTACCTTCTTCTGCCATTTCAGG GTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTC TCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCA AGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAAT TTGACAGAAGCCAAGACCGCTTCAGCAGCAATTGATCTCCAGCGTCTAGAGATTCTTGCT GGAAGCTACCTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACC TTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCG GTGAACAGTGATCCAACACAATCAGTTCATGTCTATCCGACCATTTTAATTGCACTGATT TGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGGCAGTAAGAAATAGTCAGTCTGTT TCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGT CTATTTGCCCCTTGTCTC



consensusID : consensus_11201#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 945
fasta sequence
                              [TACAGCAAAGCAAAGCATCTCGCGCCCTAGCCAAGCCAGCCATG-GCGCCGTCGTCGAGGAAAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGGCGCCGGCGGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGACGAGCCGCCGGATATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGACAGAAGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCGGTGAACAGTGATCCAACACAATCAGTTCATGTTTATCCGACCATTTTAATTGCACTGATTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGACAGTAAGAAATAGTCAGTCTGTTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGTCTATTTGCCCCTTCATCCTTGTAGTTCATTTCCACAAATTTATTGTTGAAGACTGGCCCAAAGGATAACACTACTGTGGTTCTTGTGTACCACTTTGAATACTGTAACCTTCAGTTTTCACCTTTGTATCAAAGACTTATATCTATAACTTTTATTGCAAGCA]

[+] EMBL CF326378             [TACAGCAAAGCAAAGCATCTCGCGCCCTAGCCAAGCCAGCCATG GCGCCGTCGTCGAGGAAAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGGCGCCGGCGGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGACGAGCCGCCGGATATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGACAGAAGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTT GTTATCTGGG                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK068308             [              GCATCTCGCGCCCTAGCCAAGCCAGCCATG GCGCCGTCGTCGAGGAAAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGGCGCCGGCGGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGACGAGCCGCCGGATATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGACAGATGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCGGTGAACAGTGATCCAACACAATCAGTTCATGTTTATCCGACCATTTTAATTGCACTGATTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGACAGTAAGAAATAGTCAGTCTGTTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGTCTATTTGCCCCTTCATCCTTGTAGTTCATTTCCACAAATTTATTGTTGAAGACTGGCCCAAAGGATAACACTACTGTGGTTCTTGTGTACCACTTTGAATACTGTAACCTTCAGTTTTCACCTTTGTATCAAAGACTTATATCTATAACTTTTATTGCAAGCA]
[+] EMBL OSR26361A            [                             GCCAAGCCAGCCATG GCGCCGTCGTCGAGGAAAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGGCG CGGCGGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGACGAGCCGCCGGATATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB632194             [                                      GCCACGCTCGCCGTCGTCGAGGAAAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGGCGCCGGCGGTCCAGGTGCAGCGGCGGCCGGCGGGCGGGGGCCGGTGGACGAGCCGCCGGATATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGACAGAAGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCGGTGAACAGTGATCCAACACAATCAGTTCATGTCTATCCGACCATTTTAATTGCACTGATTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGACAGTAAGAAATAGTCAGTCTGTTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGTCTATTTGCCCCTTCATCCTTGTAGTTCATTTCCACAAATTTATTGTTGAAGACTGGCCCAAAGGATAACACT                                                                                           ]


>consensus_11201#1 TACAGCAAAGCAAAGCATCTCGCGCCCTAGCCAAGCCAGCCATGGCGCCGTCGTCGAGGA AAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGG CGCCGGCGGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGACGAGCCGCCGGA TATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCA GGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGG TCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAG CAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACA ATTTGACAGAAGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTG CTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGA CCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAAC CGGTGAACAGTGATCCAACACAATCAGTTCATGTTTATCCGACCATTTTAATTGCACTGA TTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGACAGTAAGAAATAGTCAGTCTG TTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATT GTCTATTTGCCCCTTCATCCTTGTAGTTCATTTCCACAAATTTATTGTTGAAGACTGGCC CAAAGGATAACACTACTGTGGTTCTTGTGTACCACTTTGAATACTGTAACCTTCAGTTTT CACCTTTGTATCAAAGACTTATATCTATAACTTTTATTGCAAGCA



consensusID : consensus_11201#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 183
fasta sequence
                              [AGGTGGATGACTGTTGATATTACAATTTGACAGAGGCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGRGGWTGACCCTTGTTTGGNABCNTDDTDGTTATCTGGGGTCTAGTGA]

[+] EMBL AA754419             [AGGTGGATGACTGTTGATATTACAATTTGACAGAGGCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGRGGWTGACCCTTGTTTGGNABCNTDDTDGTTATCTGGGGTCTAGTGA]


>consensus_11201#2 AGGTGGATGACTGTTGATATTACAATTTGACAGAGGCAAGACCGCTTCAGCAGTAATTGA TCTCCAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGG TGTCATAAACCCTGGGRGGWTGACCCTTGTTTGGNABCNTDDTDGTTATCTGGGGTCTAG TGA



consensusID : consensus_11201#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 117
fasta sequence
                              [TGGACTGAAGGAGTAGAAACTTCAGTTTTCACCTTTGTATCAAAGACTTATATCTATAACTTTTATTGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF313616             [TGGACTGAAGGAGTAGAAACTTCAGTTTTCACCTTTGTATCAAAGACTTATATCTATAACTTTTATTGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11201#3 TGGACTGAAGGAGTAGAAACTTCAGTTTTCACCTTTGTATCAAAGACTTATATCTATAAC TTTTATTGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11201#0      TTTTTTTTTTTTTGCGGGGAATCCTGTAGCAAATTTTGCCTTCAAATTAATCTAGTTTTG 60
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TACTGACGTGGGAAATTGTGTCTATATTCTGATAGAACTCGGTAAGAGTCAGGTTGTGAC 120
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TTGATGAGACCATATCTTGGTTCCCCTTAAACCCTGGATTGGCTTGTTCTTTTTTGTCCT 180
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      GAATCGAATAGTTTCTTGCTACGGTTTCTGTCATAAATTTACCAATATGAGCAAATCATG 240
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TAGCGCTCTCAACTATGGTTGCCTCAAAATGGATCCTGTATGCATATCACTACTTGCCAG 300
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TAGGTTTGATTTTAGTGCATAGGTGTGTATGGTAGTAACAGATTAATGGTGGTAGTTCAA 360
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      CTTCTTCCCTGCTATTGCTAGATTGATGGGCTACTTTTTTGTTGCCATTCCTGACTGCTC 420
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      AATGTGGTTCAGTTTTGGACTGGATCTACGTAGAGGGAATTCTCTCCTATCTTTTCATAT 480
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ------------------------------------------------------------
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      ATTACATTGTTTCATAAGAGTCCTATAATTTCATATCAAGATTTTCCCATACCTGTACAC 540
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      ---------------------------------------------TACAGCAAAGCAAAG 15
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      GTGCTAGTGCTTTTATCTTGACTCGCCTTTTCCTCCTGAGCATGGATTCTAGGAAATTGG 600
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      CATCTCGCGCCCTAGCCAAGCCAGCCATGGCGCCGTCGTCGAGGAAAGAGAGGGCGGCGG 75
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      ATGTTACTTTGCTTCTGTACCATGCTTGCTTATTTTACCAAATTACATTTTAGTTTATTG 660
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      AGGCGAGGGCGAGCACCT-CCAAGCC-GTCTCCTGCGCCGGCCCCGGCGCCGGCG---GT 130
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      CTTAAGGTTGTCATGATTGATAAGGNCGATTTTGGAAACTAAAATACTTGGAAGTACTTT 720
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      CCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGAC--GAGCCGCCGGATATCGTTC 188
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TCTGAGTAGGACGATAAATATACTAAGTAGATTTTGCTTACCTTCTTCTGCCATTTCAGG 780
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      TACGCCTCCCGCGCC-----TTCTTCCTCCTCATCATCCTCCAGATCCCGCT-CTTCAGG 242
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      GTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTC 840
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      GTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTC 302
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCA 900
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      TCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCA 362
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      AGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAAT 960
consensus_11201#2      ------------------------------AGGTGGA-TGACT--GTTGATATT-ACAAT 26
consensus_11201#1      AGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAAT 422
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TTGACAGAAGCCAAGACCGCTTCAGCAGCAATTGATCTCCAGCGTCTAGAGATTCTTGCT 1020
consensus_11201#2      TTGACAGAGGC-AAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCT 85
consensus_11201#1      TTGACAGAAGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCT 482
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      GGAAGCTACCTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACC 1080
consensus_11201#2      GGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGRGGWTGACC 145
consensus_11201#1      GGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACC 542
consensus_11201#3      ------------TGGACTGAAGGAGTAGAAACTTCAGTTTTCACCTTTGTATCAAAGACT 48
                                   **  ***  **** *     *   **  * * *  **       *** 

consensus_11201#0      -TTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACC 1139
consensus_11201#2      CTTGTTTGGNABCNTDDTDGTTATCTGGGGTCTAGTGA---------------------- 183
consensus_11201#1      -TTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACC 601
consensus_11201#3      TATATCTATAACTTTTATTGCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 108
                         * * *   *   *  * *  * *        *   *                      

consensus_11201#0      GGTGAACAGTGATCCAACACAATCAGTTCATGTCTATCCGACCATTTTAATTGCACTGAT 1199
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      GGTGAACAGTGATCCAACACAATCAGTTCATGTTTATCCGACCATTTTAATTGCACTGAT 661
consensus_11201#3      AAAAAAAAA--------------------------------------------------- 117
                                                                                   

consensus_11201#0      TTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGGCAGTAAGAAATAGTCAGTCTGT 1259
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      TTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGACAGTAAGAAATAGTCAGTCTGT 721
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTG 1319
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      TTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTG 781
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      TCTATTTGCCCCTTGTCTC----------------------------------------- 1338
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      TCTATTTGCCCCTTCATCCTTGTAGTTCATTTCCACAAATTTATTGTTGAAGACTGGCCC 841
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      ------------------------------------------------------------
consensus_11201#2      ------------------------------------------------------------
consensus_11201#1      AAAGGATAACACTACTGTGGTTCTTGTGTACCACTTTGAATACTGTAACCTTCAGTTTTC 901
consensus_11201#3      ------------------------------------------------------------
                                                                                   

consensus_11201#0      --------------------------------------------
consensus_11201#2      --------------------------------------------
consensus_11201#1      ACCTTTGTATCAAAGACTTATATCTATAACTTTTATTGCAAGCA 945
consensus_11201#3      --------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)