cluster # 11202

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Oryza sativa
cluster # 11202 cluster # 11202 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11202#0 length = 1551 sequences # 6

consensus_11202#1 length = 782 sequences # 1
consensus_11202#2 length = 433 sequences # 1

consensusID : consensus_11202#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1551
fasta sequence

                              [CCAAGCTCTGGCTCTCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATGGCCGCGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCTGGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATGAATGTTGATGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGAAGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTGGCATTCTGAG-CCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGG-TTGAAGGTCAGACAT-TT-ACAATTGAACCT-AT-TC-TTA-CAATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCT-GGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGA-CA-GGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAG-CATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCA-GCCGTATCCTACCGAAATGTCTCTTTGGTCCACA-TGTGG-CA-GGATTACAGATCA-CA-GG-CTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCA-GGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGT-CCTTAATTTGTTTTGTTT-CCT-CCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTTGACCTGCTGCAGCCTGTATACAAATTGCCAATGCCAAGCAGAATCCCCATCACGAATTC]

[+] EMBL AK066776             [CCAAGCTCTGGCTCTCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATGGCCGCGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCTGGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATGAATGTTGATGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGAAGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTGGCATTCTGAG CCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGG TTGAAGGTCAGACAT TT ACAATTGAACCT AT TC TTA CAATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGA CA GGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAG CATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCA GCCGTATCCTACCGAAATGTCTCTTTGGTCCACA TGTGG CA GGATTACAGATCA CA GG CTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCA GGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGT CCTTAATTTGTTTTGTTT CCT CCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTTGACCTGCTGCAGCCTGTATACAAATTGCCAATGCCAAGCAGAATCCCCATCACGAATTC]
[+] EMBL AW155453             [  AAGCTCTGGCTCTCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATGGCCGCGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGGCAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCTCTGGAATGATAGCTGCTTGC AACTTGCTGCCAGGCCTCT GACTTTGCTGG ACATTGATTAA CCCTTAG TACTAC AATGAAATTGACA GGAAATG ATTAAATGAAAAAGAAGGCCGGT C TAACCATTTTAACTGGGgat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB669451             [              TCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATGGCCGCGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCTGGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATGAATGTTGATGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C71826               [                        TTGCCCTCGACCTCCCACCCCTTCCATGGCNGCGCNGGGCGNTNGCNTGGCGTCGCGCTCGNAACCCGCNTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGAGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTNAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGAAAG ACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C98564               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccTTCTGAGCCCACT ATCCTACATCAGGCCAATGACAACTCTGGGCGAATGG TTGAAGGTCAGACAT TT ACAATTGAACCT AT TC TTA C ATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCA NGCCGATGGCAGCT GGNTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGA CA GGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCA GCCGTATCCTACCGAAATGTCTCTTTGGTCCACA TGTGG CA GGATTACAGATCA CA GG CTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCA GGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGT CCTTAATTTGTTTTGTTT CCT CCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTTGACCTGCTGCAGCCTGTAaaaa                                     ]
[+] EMBL BI806621             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTGGGCGAATGGTTTGAAGGTCAGACATGTTCACAGTTGAACCTGATGTCGTTACCCATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCT GGCTGCGCCGTTTAAGCATACTGTACTAGTCACTCGGACCACGGGGCTGAAATACTGACCAAACTTTGACA   TCTTTATTATGATAAGAAGTTGTTGGGCCCTTTACCTTGAG CATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCACGCCGTATCCTACCGAAATGTCTCTTTGGTCCACACTGTGGCCACGGATTACAGATCACCACGGCCTGAAGAGCTGATCGACGAGATCTGTGATGAAAGTTCTGTACCACGGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCNTGTAATGTGTAAATAGTCCCTTAATTTGTTTTTTTTCCCTCCCTTAAAAAAAaaa                                                                                                 ]




>consensus_11202#0
CCAAGCTCTGGCTCTCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATGGCCGCGCC
GGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGC
CCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCG
ACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGA
GTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAAT
CTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAG
ACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCTGGAATGAG
AGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGCCATC
AGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTA
TCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTG
TGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATGAATGTTGA
TGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGA
AGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTAT
TACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGC
TTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTG
GCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGG
TCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGA
AGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGCTGCGCAGTTTAAGCATACTGTA
CTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGAT
AAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCC
CCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAGA
TCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGG
CTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCA
GTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTCCT
CCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTTGACCTGCT
GCAGCCTGTATACAAATTGCCAATGCCAAGCAGAATCCCCATCACGAATTC

consensusID : consensus_11202#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 782
fasta sequence

                              [AGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTGGCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGGTCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTCCTCCTTAATACAACGCCGAAGGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTCCTTAAAGGA]

[-] EMBL CB669452             [AGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTGGCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGGTCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTCCTCCTTAATACAACGCCGAAGGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTCCTTAAAGGA]




>consensus_11202#1
AGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTAT
TACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGC
TTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTG
GCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGG
TCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGA
AGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGT
ACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGA
TAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCC
CCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAG
ATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTG
GCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATC
AGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTCC
TCCTTAATACAACGCCGAAGGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTCCTTAAAG
GA

consensusID : consensus_11202#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 433
fasta sequence

                              [TGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTAAGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTTTTGACGTATTGATAGAGCATGTAATGTGTGAATAGTCCTTAATTTGTTTTGTTTCCTCCTTAATACAAAAAAAAAAAAAGTAAAACTTG]

[-] EMBL CF326187             [TGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTAAGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTTTTGACGTATTGATAGAGCATGTAATGTGTGAATAGTCCTTAATTTGTTTTGTTTCCTCCTTAATACAAAAAAAAAAAAAGTAAAACTTG]




>consensus_11202#2
TGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGACAGGGGC
TGAAATACTGACAAAACTTTGACATCTTCTTTATTATGATAAGAAGTTGTTGGGCCATTT
ACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCAGCCGTATCCTA
CCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGAT
CGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTAAGG
ATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTTTTGACGTATTGATAGA
GCATGTAATGTGTGAATAGTCCTTAATTTGTTTTGTTTCCTCCTTAATACAAAAAAAAAA
AAAGTAAAACTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11202#0      CCAAGCTCTGGCTCTCTCGGTAGGTTGCCCTCGACCTCCCACCCCTTCCATGGCCGCGCC 60
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      GGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGC 120
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      CCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGGAAATCAATCGCACCGAGCCG 180
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      ACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGA 240
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      GTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAAT 300
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      CTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAG 360
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      ACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATCGCTGGAATGAG 420
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      AGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGCCATC 480
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      AGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTA 540
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      TCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTG 600
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      TGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATGAATGTTGA 660
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      TGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGA 720
consensus_11202#1      ------------------------------------------------------------
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      AGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTAT 780
consensus_11202#1      AGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTAT 60
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      TACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGC 840
consensus_11202#1      TACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGC 120
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      TTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTG 900
consensus_11202#1      TTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTG 180
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      GCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGG 960
consensus_11202#1      GCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGG 240
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      TCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGA 1020
consensus_11202#1      TCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGA 300
consensus_11202#2      ------------------------------------------------------------
                                                                                   

consensus_11202#0      AGATGGATGGACTACTGTCACTGCCGATGGCAGCTGG-CTGCGCAGTTTAAGCATACTGT 1079
consensus_11202#1      AGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGT 360
consensus_11202#2      ---------------------TGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGT 39
                                            **************** **********************

consensus_11202#0      ACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGA 1139
consensus_11202#1      ACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGA 420
consensus_11202#2      ACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTCTTTATTATGA 99
                       ************************************************************

consensus_11202#0      TAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCC 1199
consensus_11202#1      TAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCC 480
consensus_11202#2      TAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCC 159
                       ************************************************************

consensus_11202#0      CCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAG 1259
consensus_11202#1      CCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAG 540
consensus_11202#2      CCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTCCACATGTGGCAGGATTACAG 219
                       ************************************************************

consensus_11202#0      ATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTG 1319
consensus_11202#1      ATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTG 600
consensus_11202#2      ATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTG 279
                       ************************************************************

consensus_11202#0      GCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATC 1379
consensus_11202#1      GCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATC 660
consensus_11202#2      GCTTGTGCGAAGGGTTTAAGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATC 339
                       *****************  *****************************************

consensus_11202#0      AGTTACTGACGTATTGCTAG-GCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTC 1438
consensus_11202#1      AGTTACTGACGTATTGCTAG-GCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTC 719
consensus_11202#2      AGTTTTTGACGTATTGATAGAGCATGTAATGTGTGAATAGTCCTTAATTTGTTTTGTTTC 399
                       ****  ********** *** ************* *************************

consensus_11202#0      CTCCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTTGACCTG 1498
consensus_11202#1      CTCCTTAATACAACGCCGAAGGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTC--CTTA 777
consensus_11202#2      CTCCTTAATACAAAAAAAAAAAAAGTAAA-ACTTG------------------------- 433
                       *************     **    * *    ****                         

consensus_11202#0      CTGCAGCCTGTATACAAATTGCCAATGCCAAGCAGAATCCCCATCACGAATTC 1551
consensus_11202#1      AAGGA------------------------------------------------ 782
consensus_11202#2      -----------------------------------------------------