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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11209#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2555 fasta sequence
[CTCTTTCCTCGGGCTCAAGCGCTCGGCGGCGGCCGGCCTCCGGCGGGGTGGCGCGGCCGAGGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTTATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCCGGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGTTGCTGTGTTCGGGAGTCGGGGACATCAGCAGCGGCGGCGCTTCGTCTCCCAGATGGGTGAAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGGTCATTACCTACTCTCCATTTATGCCTGGTTCCCCTACATTTGCTCTCATTCGTCATGCAAATTTTCAGATTCCTTTTAGCTTTCTTCCTCGCAGACCTCTCATCAGGAGGTTCTGTTGGGTGGATGGTGCTGTACCCTTTGAGCTAGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGGCGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCTGTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGACACAGACCAGATGTTTGTTCGGTCTCTCAGCTCTGACAATCTCAGCACCATTGAGACCTTTGAGTCACCACCGGCATTACTCGACTCCCTGAGTTCCCAAAGGCCTATCATAAAAGAATCCTTTAACTTCAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGTATCCTTGATGAGTCCTAAACCCGGCAAGGAGAAGAGTTGCACCCATAAACGCACTATCCTACCAAGATATGGGTCAATGGAATACTTGCCACCACATTCTCCAGTGGTTGGGATGATCAGCCCGAAGCACCAGGCCGCAGCAGTAAGAGTGCAGAAGGTATACAAGAGCTTCAGGACTAGGCGGCAACTTGCTGATTGCGCTGTTCTTGTTGAACAACGCTGGTGGAAACTGATAGATTTCGCACTGCTCAAGCACAATTCAGTATCCTTTTTTGAGGAGGAGAAGCCAGAATCTGCCCTCTCAAGGTGGTCTCGGGCTAGAACGAAAGCTGCGAAGGTAGGTAAAGGTCTGTCGAAGGATGAAAAGGCTCAGAAGCTCGCTTTGCAGCACTGGCTCGAAGCTATTGACCCTCGGCATCGGTATGGTCACAACCTCCATTACTACTACCAACATTGGCTTCACTGCGAAAGCAAACAACCTTTCTTCTACTGGTTGGATGTGGGTGAAGGAAAAGACGTAAGTATGGAGGACCACTGCCCTAGATGGAAGCTGTTGCAGCAATGCATCAGGTATCTTGGCCCTAAAGAGAGGGAGTTCTATGAGGTAGTAATTGAGAACAAGAAACTGCTGTACAAGATGAGCCGCAAGATTGTCGACACTTCTGAGGGCCCCAAGAATTCGAAATGGATCTTCGTGTTGAGCACAACAAGAGTTCTATACATTGGCACGAAGAGCAAGGGCACATTCCAGCACTCCAGCTTCCTTGCTGGTGGAGCCACATCTGCTGCCGGGAGACTAGTTGTAGATAATGGAATCCTAAAGGCTGTCTGGCCACATAGCGGGCACTACCGTCCTACGGAGGCAAACTTCCGCGAATTCATGATGTATCTGAAGAAGAGAAACGTAGATCTTGCCAATATCAAGTTGAGCCCATCAGAAGACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCCGCTCCCAGCTCGAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGACGACAATGGCACTACCACCGTGGCCGCGCAAGCCGCGCCACCCTCCACCACCGGCGGTGAGCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGCAGCGCAAGCGGCCGCCGAGGCTGACGCTGGACAAGAGCCGGCTGGCCAAGGGCGTGGCGGAGCAGGACGCCGGGTCGTTCGGCGACCGCCTGGACTTCTGCAAGGTGAACCTGTTCCGCGGCGGCGAGGAGGCGGAGGAGGCGGTGGTGGTGCCGCAGGAGAAGATCCTCCGCCGGCTCAACTCCAGGATGACCATGAACTCGTACCAGCTCGGGAAGCAGCTGTCGCTCCGGTGGACCACCGGCGCCGGGCCGCGGATCGGCTGCGTCCGCGACTACCCGCCGGAGCTCCAGTTCCGGGTGATGGAGCAGATCAGCCTGACTCCGCGCGGCGGCGCCGGGCCACTGAGGCTCGGGTCGACGGCGACCCCCCGGCAGAGCCCCTGCGCGCCGCTCCCGTCGCCGGCGCCGCTTTACGCCGCCGCCGGGACTCCCACCTCGCTGCTGCAGCACGGTGCAGCCTAAAAGTCCTTACTTTGTGGGCGTATTCAGAGTTTCAGACAGTATAAAATTCGAGCCAATAACCAATCCATGCATCAATTCAGCTAATATTATCGAGCACAACCATGTCACATTGCAT-CAAGTGAAATTCAGCT]
[+] EMBL AK066554 [CTCTTTCCTCGGGCTCAAGCGCTCGGCGGCGGCCGGCCGCCGGCGGGGTGGCGCGGCCGAGGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTTATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCCGGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGTTGCTGTGTTCGGGAGTCGGGGACATCAGCAGCGGCGGCGCTTCGTCTCCCAGATGGGTGAAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGGTCATTACCTACTCTCCATTTATGCCTGGTTCCCCTACATTTGCTCTCATTCGTCATGCAAATTTTCAGATTCCTTTTAGCTTTCTTCCTCGCAGACCTCTCATCAGGAGGTTCTGTTGGGTGGATGGTGCTGTACCCTTTGAGCTAGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGGCGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCTGTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGACACAGACCAGATGTTTGTTCGGTCTCTCAGCTCTGACAATCTCAGCACCATTGAGACCTTTGAGTCACCACCGGCATTACTCGACTCCCTGAGTTCCCAAAGGCCTATCATAAAAGAATCCTTTAACTTCAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGTATCCTTGATGAGTCCTAAACCCGGCAAGGAGAAGAGTTGCACCCATAAACGCACTATCCTACCAAGATATGGGTCAATGGAATACTTGCCACCACATTCTCCAGTGGTTGGGATGATCAGCCCGAAGCACCAGGCCGCAGCAGTAAGAGTGCAGAAGGTATACAAGAGCTTCAGGACTAGGCGGCAACTTGCTGATTGCGCTGTTCTTGTTGAACAACGCTGGTGGAAACTGATAGATTTCGCACTGCTCAAGCACAATTCAGTATCCTTTTTTGAGGAGGAGAAGCCAGAATCTGCCCTCTCAAGGTGGTCTCGGGCTAGAACGAAAGCTGCGAAGGTAGGTAAAGGTCTGTCGAAGGATGAAAAGGCTCAGAAGCTCGCTTTGCAGCACTGGCTCGAAGCTATTGACCCTCGGCATCGGTATGGTCACAACCTCCATTACTACTACCAACATTGGCTTCACTGCGAAAGCAAACAACCTTTCTTCTACTGGTTGGATGTGGGTGAAGGAAAAGACGTAAGTATGGAGGACCACTGCCCTAGATGGAAGCTGTTGCAGCAATGCATCAGGTATCTTGGCCCTAAAGAGAGGGAGTTCTATGAGGTAGTAATTGAGAACAAGAAACTGCTGTACAAGATGAGCCGCAAGATTGTCGACACTTCTGAGGGCCCCAAGAATTCGAAATGGATCTTCGTGTTGAGCACAACAAGAGTTCTATACATTGGCACGAAGAGCAAGGGCACATTCCAGCACTCCAGCTTCCTTGCTGGTGGAGCCACATCTGCTGCCGGGAGACTAGTTGTAGATAATGGAATCCTAAAGGCTGTCTGGCCACATAGCGGGCACTACCGTCCTACGGAGGCAAACTTCCGCGAATTCATGATGTATCTGAAGAAGAGAAACGTAGATCTTGCCAATATCAAGTTGAGCCCATCAGAAGACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCCGCTCCCAGCTCGAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGACGACAATGGCACTACCACCGTGGCCGCGCAAGCCGCGCCACCCTCCACCACCGGCGGTGAGCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGCAGCGCAAGCGGCCGCCGAGGCTGACGCTGGACAAGAGCCGGCTGGCCAAGGGCGTGGCGGAGCAGGACGCCGGGTCGTTCGGCGACCGCCTGGACTTCTGCAAGGTGAACCTGTTCCGCGGCGGCGAGGAGGCGGAGGAGGCGGTGGTGGTGCCGCAGGAGAAGATCCTCCGCCGGCTCAACTCCAGGATGACCATGAACTCGTACCAGCTCGGGAAGCAGCTGTCGCTCCGGTGGACCACCGGCGCCGGGCCGCGGATCGGCTGCGTCCGCGACTACCCGCCGGAGCTCCAGTTCCGGGTGATGGAGCAGATCAGCCTGACTCCGCGCGGCGGCGCCGGGCCACTGAGGCTCGGGTCGACGGCGACCCCCCGGCAGAGCCCCTGCGCGCCGCTCCCGTCGCCGGCGCCGCTCTACGCCGCCGCCGGGACTCCCACCTCGCTGCTGCAGCACGGTGCAGCCTAAAAGTCCTTACTTTGTGGGCGTATTCAGAGTTTCAGACAGTATAAAATTCGAGCCAATAACCAATCCATGCATCAATTCAGCT ]
[+] EMBL CB670178 [ CGGCCGGCCTTCGGCGGGGTGGCGCGGCCGAGGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTTATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCCGGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGTTGCTGTGTTCGGGAGTCGGGGACATCAGCAGCGGCGGCGCTTCGTCTCCCAGATGGGTGAAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGGTCATTACCTACTCTCCATTTATGCCTGGTTCCCCTACATTTGCTCTCATTCGTCATGCAAATTTTCAGATTCCTTTTAGCTTTCTTCCTCGCAGACCTCTCATCAGGAGGTTCTGTTGGGTGGATGGTGCTGTACCCTTTGAGCTAGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGGCGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCTGTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGACACAGACCAGATGTTTGTTCGGTCTCTCAGCTCTGACAATCTCAGCACCATTGAGACCTTTGAGTCACCACCGGCATTACTCGACTCCCTGAGTTCCCANAGGCCTATCATAAAAGAATCCTTTAACTTCAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGT ]
[+] EMBL CB670131 [ CGGCCGCCCTCCGGCGGGGTGGCGCGGCCGAGGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTTATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCCGGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGTTGCTGTGTTCGGGAGTCGGGGACATCAGCAGCGGCGGCGCTTCGTCTCCCAGATGGGTGAAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGGTCATTACCTACTCTCCATTTATGCCTGGTTCCCCTACATTTGCTCTCATTCGTCATGCAAATTTTCAGATTCCTTTTAGCTTTCTTCCTCGCAGACCTCTCATCAGGAGGTTCTGTTGGGTGGATGGTGCTGTACCCTTTGAGCTAGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGGCGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCTGTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGACACAGACCAGATGTTTGTTCGGTCTCTCAGCTCTGACAATCTCAGCACCATTGAGACCTTTGAGTCACCACCGGCATTACTCGACTCCCTGAGTTCCC AAGGCCTATCATAAAAGAATCCTTTAACTTCAAAAAAAGTGAGGGTGATCCATTTCATG ]
[-] EMBL CB670132 [ ACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCCGCTCCCAGCTCGAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGACGACAATGGCACTACCACCGTGGCCGTGCAAGCCGCGCCACCCTCCACCACCGGCGGTGAGCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGCAGCGCAAGCGGCCGCCGAGGCTGACGCTGGACAAGAGCCGGCTGGCCAAGGGCGTGGCGGAGCAGGACGCCGGGTCGTTCGGCGACCGCCTGGACTTCTGCAAGGTGAACCTGTTCCGCGGCGGCGAGGAGGCGGAGGAGGCGGTGGTGGTGCCGCAGGAGAAGATCCTCCGCCGGCTCAACTCCAGGATGACCATGAACTCGTACCAGCTCGGGAAGCAGCTGTCGCTCCGGTGGACCACCGGCGCCGGGCCGCGGATCGGCTGCGTCCGCGACTACCCGCCGGAGCTCCAGTTCCGGGTGATGGAGCAGATCAGCCTGACTCCGCGCGGCGGCGCCGGGCCACTGAGGCTCGGGTCGACGGCGACCCCCCGGCAGAGCCCCTGCGCGCCGCTCCCGTCGCCGGCGCCGCTTTACGCCGCCGCCGGGACTCCCACCTCGCTGCTGCAGCACGGTGCAGCCTAAAAGTCCTTACTTTGTGGGCGTATTCAGAGTTTCAGACAGTATAAAATTCGAGCCAATAA ]
[-] EMBL CB659729 [ CAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGACGACAATGGCACTACCACCGTGGCCGCGCAAGCCGCGCCACCCTCCACCACCGGCGGTGAGCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGCAGCGCAAGCGGCCGCCGAGGCTGACGCTGGACAAGAGCCGGCTGGCCAAGGGCGTGGCGGAGCAGGACGCCGGGTCGTTCGGCGACCGCCTGGACTTCTGCAAGGTGAACCTGTTCCGCGGCGGCGAGGAGGCGGAGGAGGCGGTGGTGGTGCCGCAGGAGAAGATCCTCCGCCGGCTCAACTCCAGGATGACCATGAACTCGTACCAGCTCGGGAAGCAGCTGTCGCTCCGGTGGACCACCGGCGCCGGGCCGCGGATCGGCTGCGTCCGCGACTACCCGCCGGAGCTCCAGTTCCGGGTGATGGAGCAGATCAGCCTGACTCCGCGCGGCGGCGCCGGGCCACTGAGGCTCGGGTCGACGGCGACCCCCCGGCAGAGCCCCTGCGCGCCGCTCCCGTCGCCGGCGCCGCTTTACGCCGCCGCCGGGACTCCCACCTCGCTGCTGCAGCACGGTGCAGCCTAAAAGTCCTTACTTTGTGGGCGTATTCAGAGTTTCAGACAGTATAAAATTCGAGCCAATAACCAATCCATGCATCAATTCAGCTAATATTATCGAGCACAACCATGTCACATTGCAT CAAGTGAAATTCAGCT]
[-] EMBL CB637713 [ aAGGAGACGGTGGTGGTACCGCAGGAGAAGATCCTCCGCCGGTTCAACTCCAGGATGACCATGAACTCGTACCAGCTCGGGAAGCAGCTGTCGCTCCGGTGGACCACCGGCGCCGGGCCGCGGATCGGCTGCGTCCGCGACTACCCGCCGGAGCTCCAGTTCCGGGTGATGGAGCAGATCAGCTTGACTCCGCGCGGCGGCGCCGGGCCACTGAGGCTCGGGTCGACGGCGACCCCCCGGCAGAGCCCTTGCGCGCCGCTCCCGTCGCCGGCGCCGTTTTACGCCGCCGCCAGAAATCCCACCTCGCTGCTGCAGCACGGTGCAGCTTAAAAGTCCTTACTTTGTGGGCGTATTCAGAGTTTCAGACAGTATAAAATTCGAGCCAATAACCAATCCATGCATCAATTCAGCTAATATTTGCGAGCACAACCATGTCACATTG ATACAAGTGAAAaaac ]
consensusID : consensus_11209#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 786 fasta sequence
[TCGGCGGCGGCCGGCCGCCGGCGGGGTGGCGCGGCCGAGGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTTATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCCGGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGTTGCTGTGTTCGGGAGTCGGGGACATCAGCAGCGGCGGCGCTTCGTCTCCCAGATGGGTGAAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGGCGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCTGTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGACACAGACCAGATGTTTGTTCGGTCTCTCAGCTCTGACAATCTCAGCACCATTGAGACCTTTGAGTCACCACCGGCATTACTCGACTCCCTGAGTTCCCAAAGGCCTATCATAAAAGAATCCTTTAACTTCAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGTATCCTTGATGAGTCCTAAACCCGGCAAGGAGAAGAGTTGCACCCATAAACGCACTATCCTACCAAGATATGGGTNCATGGAATACTTGCCACCACATTCTCCAGTGGTTGGGATGATCAGCCCGAAGCACCAGGCCGCAGC]
[+] EMBL CB659728 [TCGGCGGCGGCCGGCCGCCGGCGGGGTGGCGCGGCCGAGGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTTATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCCGGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGTTGCTGTGTTCGGGAGTCGGGGACATCAGCAGCGGCGGCGCTTCGTCTCCCAGATGGGTGAAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGGCGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCTGTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGACACAGACCAGATGTTTGTTCGGTCTCTCAGCTCTGACAATCTCAGCACCATTGAGACCTTTGAGTCACCACCGGCATTACTCGACTCCCTGAGTTCCCAAAGGCCTATCATAAAAGAATCCTTTAACTTCAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGTATCCTTGATGAGTCCTAAACCCGGCAAGGAGAAGAGTTGCACCCATAAACGCACTATCCTACCAAGATATGGGTNCATGGAATACTTGCCACCACATTCTCCAGTGGTTGGGATGATCAGCCCGAAGCACCAGGCCGCAGC]
consensusID : consensus_11209#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[AATTCTATGAGGTATAATTTGAGAACAGAAACTGCTGTACAAGATGAGCCGCAAGATTGTCGACACTTCTGAGGGCCCCAGAATTCGAAATGGATCTTCGTGTTGAGCACAACAAGAGTTCTATACATTGCACGGTACCTTTTTTGAGCATTAAGCAAAGAGCAAGGGCACATTCCAGCACTCCAGCTTCCTTGCTGGTGGAGCCACATCTGCTGCCGGGAGACTAGTTGTAGATAATGGAATCCTAAAGGCTGTCTGGCCACATAGCGGGCACTACCGTCCTACGGAGGCAAACTTCCGCGAATTCATGATGTATCTGAAGAAGAGAAACGTAGATCTTGCCAATATCAAGTTGAGCCCATCAGAAGACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCCGCTCCCAGCTCAAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGACGACAATGGCACTACCACCGTGGCCGCGCAACCGCGCCACCCTCCACCACCGGCGGTGAGCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGC]
[+] EMBL BU667360 [AATTCTATGAGGTATAATTTGAGAACAGAAACTGCTGTACAAGATGAGCCGCAAGATTGTCGACACTTCTGAGGGCCCCAGAATTCGAAATGGATCTTCGTGTTGAGCACAACAAGAGTTCTATACATTGCACGGTACCTTTTTTGAGCATTAAGCAAAGAGCAAGGGCACATTCCAGCACTCCAGCTTCCTTGCTGGTGGAGCCACATCTGCTGCCGGGAGACTAGTTGTAGATAATGGAATCCTAAAGGCTGTCTGGCCACATAGCGGGCACTACCGTCCTACGGAGGCAAACTTCCGCGAATTCATGATGTATCTGAAGAAGAGAAACGTAGATCTTGCCAATATCAAGTTGAGCCCATCAGAAGACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCCGCTCCCAGCTCAAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGACGACAATGGCACTACCACCGTGGCCGCGCAACCGCGCCACCCTCCACCACCGGCGGTGAGCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11209#0 CTCTTTCCTCGGGCTCAAGCGCTCGGCGGCGGCCGGCCTCCGGCGGGGTGGCGCGGCCGA 60
consensus_11209#1 ----------------------TCGGCGGCGGCCGGCCGCCGGCGGGGTGGCGCGGCCGA 38
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTT 120
consensus_11209#1 GGCCCGAGGGGGAAGGAGACGGCGGCGGTGTGTGGCGTGGCCGGTACGCCTCCATGCCTT 98
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 ATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCC 180
consensus_11209#1 ATCGGTGCTCGTGTTCCTTCGCGTCGAGGAGTGGGGAAGCGGCTGGAGAAATGGCTCTCC 158
consensus_11209#2 --------------------AATTCTATGAGGTATAATTTGAGAACAGAAACTGCTGTAC 40
** * *** * * ***** *** * *
consensus_11209#0 GGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGT 240
consensus_11209#1 GGCTTCCGGCGGCGAGGCCGCCATGTTCGCCTAGATGATTAACATCGTTGAGCCCGGCGT 218
consensus_11209#2 AAGATG-AGCCGCAAGATTGTCGACACTTCTGAGGGCCCCAGAAT--TCGAAATGGATCT 97
* ** ** ** * * * ** * ** * ** * *
consensus_11209#0 TGCTGTGTTCGGGAGTCGGGGACATCAGCAGCG-GCGGCGCTTCGTCTCCCAGATGGGTG 299
consensus_11209#1 TGCTGTGTTCGGGAGTCGGGGACATCAGCAGCG-GCGGCGCTTCGTCTCCCAGATGGGTG 277
consensus_11209#2 TCGTGTTGAGCACAACAAGAGTTCTATACATTGCACGGTACCTTTTTTGAGCATTAAGCA 157
* *** * * * * ** * *** * * * * * *
consensus_11209#0 AAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATGGTCATTACCTACTC 359
consensus_11209#1 AAGACAGCAACAAACCCATCCCCGTGTTCATCTGCCCTCTTCCATG-------------- 323
consensus_11209#2 AAG--AGCAA-GGGCACATTCCAGCACTC--CAGCTTCCTTGCTGG-------------- 198
*** ***** * *** ** * ** * ** *** * *
consensus_11209#0 TCCATTTATGCCTGGTTCCCCTACATTTGCTCTCATTCGTCATGCAAATTTTCAGATTCC 419
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTTTAGCTTTCTTCCTCGCAGACCTCTCATCAGGAGGTTCTGTTGGGTGGATGGTGCTGT 479
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 ACCCTTTGAGCTAGAGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGG 539
consensus_11209#1 --------------AGCTCCAGAGCGACAGAAGTAAGGCTTATCAGAAGAAACTATAGGG 369
consensus_11209#2 -------------------TGGAGCCACAT--------CTGCTGCCGGGAGACTAGTTGT 231
**** *** ** * ** **** *
consensus_11209#0 CGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCT 599
consensus_11209#1 CGGAAAGCAAACAAAAAAAACTGTCACGTTATTGCATTTTTTCAGTCAGGAAATGGGCCT 429
consensus_11209#2 AGATAATGGAATCCTAAAGGCTGTCTGGCCACATAGCGGGCACTACCGTCCTACGGA--- 288
* ** ** *** ***** * * * * * **
consensus_11209#0 GTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGA-CACAGACCAGATGT 658
consensus_11209#1 GTCAATCTCATACCCGCCAGATGACTACCTGCCTACGGAAGAGGA-CACAGACCAGATGT 488
consensus_11209#2 GGCAAACTT----CCGCGAATTCATGATGTATCTGAAGAAGAGAAACGTAGATCTTGCCA 344
* *** ** **** * * * * * ** ****** * * *** *
consensus_11209#0 TTGTTCGGTCTCTCAGCTCTGACAATCTC-AGCACCATTG----AGACCTTTGAGTCACC 713
consensus_11209#1 TTGTTCGGTCTCTCAGCTCTGACAATCTC-AGCACCATTG----AGACCTTTGAGTCACC 543
consensus_11209#2 ATATCAAGTTGAGCCCATCAGAAGACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCC 404
* * ** * ** ** * ** ** * ** ** * **** **
consensus_11209#0 ACCGGCATTACTCGACTCCCTGAGTTCCCAAAGGCCTATCATAAAAGAATCCTTTAACTT 773
consensus_11209#1 ACCGGCATTACTCGACTCCCTGAGTTCCCAAAGGCCTATCATAAAAGAATCCTTTAACTT 603
consensus_11209#2 GCTCCCA--GCTCAAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGC 462
* ** *** * * * ** **** * ***** * *
consensus_11209#0 CAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGTATCCTTGATGAGTCCTAA 833
consensus_11209#1 CAAAAAAAGTGAGGGTGATCCATTTCATGTTGAAACTACAGTATCCTTGATGAGTCCTAA 663
consensus_11209#2 CGACGACAATG-GCACTACCACCGTGGCCGCGCAACCGCGCCACCCTCCACCA------- 514
* * * * ** * * * * * *** * * *** * *
consensus_11209#0 ACCCGGCAAGGAGAAGAGTTGCACCCATAAACGCACTATCCTACCAAGATATGGGTCAAT 893
consensus_11209#1 ACCCGGCAAGGAGAAGAGTTGCACCCATAAACGCACTATCCTACCAAGATATGGGTNCAT 723
consensus_11209#2 --CCGGCGGTGAGCC-AGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGC 571
***** *** ** * ** * * ** * * * * *
consensus_11209#0 GGAATACTTGCCACCACATTCTCCAGTGGTTGGGATGATCAGCCCGAAGCACCAGGCCGC 953
consensus_11209#1 GGAATACTTGCCACCACATTCTCCAGTGGTTGGGATGATCAGCCCGAAGCACCAGGCCGC 783
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 AGCAGTAAGAGTGCAGAAGGTATACAAGAGCTTCAGGACTAGGCGGCAACTTGCTGATTG 1013
consensus_11209#1 AGC--------------------------------------------------------- 786
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CGCTGTTCTTGTTGAACAACGCTGGTGGAAACTGATAGATTTCGCACTGCTCAAGCACAA 1073
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTCAGTATCCTTTTTTGAGGAGGAGAAGCCAGAATCTGCCCTCTCAAGGTGGTCTCGGGC 1133
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TAGAACGAAAGCTGCGAAGGTAGGTAAAGGTCTGTCGAAGGATGAAAAGGCTCAGAAGCT 1193
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CGCTTTGCAGCACTGGCTCGAAGCTATTGACCCTCGGCATCGGTATGGTCACAACCTCCA 1253
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTACTACTACCAACATTGGCTTCACTGCGAAAGCAAACAACCTTTCTTCTACTGGTTGGA 1313
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TGTGGGTGAAGGAAAAGACGTAAGTATGGAGGACCACTGCCCTAGATGGAAGCTGTTGCA 1373
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GCAATGCATCAGGTATCTTGGCCCTAAAGAGAGGGAGTTCTATGAGGTAGTAATTGAGAA 1433
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CAAGAAACTGCTGTACAAGATGAGCCGCAAGATTGTCGACACTTCTGAGGGCCCCAAGAA 1493
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTCGAAATGGATCTTCGTGTTGAGCACAACAAGAGTTCTATACATTGGCACGAAGAGCAA 1553
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GGGCACATTCCAGCACTCCAGCTTCCTTGCTGGTGGAGCCACATCTGCTGCCGGGAGACT 1613
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 AGTTGTAGATAATGGAATCCTAAAGGCTGTCTGGCCACATAGCGGGCACTACCGTCCTAC 1673
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GGAGGCAAACTTCCGCGAATTCATGATGTATCTGAAGAAGAGAAACGTAGATCTTGCCAA 1733
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TATCAAGTTGAGCCCATCAGAAGACGAAGAGGACGAGTGTCTCAGGTCCAGGAGTGGCCG 1793
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CTCCCAGCTCGAGCCAACCGAGCCAGGAAAGCCTGAGAAGGAAGAAGACGCCACGGCCGA 1853
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CGACAATGGCACTACCACCGTGGCCGCGCAAGCCGCGCCACCCTCCACCACCGGCGGTGA 1913
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GCCAGCCACGCCGGTGATGAAGAGGTCATCCTCCGGCAACCGCCTGCAGCGCAAGCGGCC 1973
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GCCGAGGCTGACGCTGGACAAGAGCCGGCTGGCCAAGGGCGTGGCGGAGCAGGACGCCGG 2033
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GTCGTTCGGCGACCGCCTGGACTTCTGCAAGGTGAACCTGTTCCGCGGCGGCGAGGAGGC 2093
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GGAGGAGGCGGTGGTGGTGCCGCAGGAGAAGATCCTCCGCCGGCTCAACTCCAGGATGAC 2153
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CATGAACTCGTACCAGCTCGGGAAGCAGCTGTCGCTCCGGTGGACCACCGGCGCCGGGCC 2213
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GCGGATCGGCTGCGTCCGCGACTACCCGCCGGAGCTCCAGTTCCGGGTGATGGAGCAGAT 2273
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CAGCCTGACTCCGCGCGGCGGCGCCGGGCCACTGAGGCTCGGGTCGACGGCGACCCCCCG 2333
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GCAGAGCCCCTGCGCGCCGCTCCCGTCGCCGGCGCCGCTTTACGCCGCCGCCGGGACTCC 2393
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CACCTCGCTGCTGCAGCACGGTGCAGCCTAAAAGTCCTTACTTTGTGGGCGTATTCAGAG 2453
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTTCAGACAGTATAAAATTCGAGCCAATAACCAATCCATGCATCAATTCAGCTAATATTA 2513
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TCGAGCACAACCATGTCACATTGCATCAAGTGAAATTCAGCT 2555
consensus_11209#1 ------------------------------------------
consensus_11209#2 ------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||