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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11210#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2823 fasta sequence
[TCCCCTCGTCGTGGTGCATATATATATTGAAGGCCTGAAATGGCTGAACATTGGGCAGAAGGTTCAAAGCATGCTTCTGCACAAGCATCGTAATCTAGATATCAAGCAACATCTGCAAGATCTAGGCAAAGGAACATCTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAACAAAACACCAAGCTAAAAAACTTTGGAGCAAATCTCCAGGAAATGATGCTGATTCCAATGAACTAAGATATGCAGCTACAGATGCTAAACATGATATATATTCATGGGCAGAATCACAGTCCCTGCATCACTGGTCTGCCAAATATTGTCCTCTTTTGCCACCCCCCAGGTCTACTATCGCAGCTGCATTCAGCCCAGATGGGAAAACACTTGCATCTACACATGGTGATCATACTGTTAAAATAATTGACTATCAAACTGGGAAATGTTTGAAAGTGCTGAGTGGACATCGGCGCAC-GCCTTGGGTGGTTAGATACCATCCATTACTTCCTGATATCCTTGCTAGCGGTAGTTTGGATCAGGAAGTCCGTCTTTGGGACGCTAAAACCTC-AGACTGTATTGGATCTCAGGACTTCCATCGGCCAATTGCATCAATAGCATTTCATGCAAGGGGGGAGATTCTGGCAGTTGCATCAGGTCACAAACTGTACATATGGAACTACAATAAAAGAGATGAGGCTGCTGCTCCAACCATTATATTAAGAACCCGCCGCTCACTAAGAGCTGTCCATTTTCACCCCCATGGTGCTCCATATCTTCTTACTGCAGAGGTTAATAATCTTGATTCTGCGGACTCACCATTGACCCTTGCAACCTCTTCGGGCTATTCAAACTATCCCTCGGCTGTGTTTTTTGCAAATATTAATTCCAGAAACTGTCCACATCATGAGGCTAATTCATCATCACCTTGCTTGCTTTGGCCTGCATACCTCAGGGATGATGGAAGTTTATGTCTGATTCGCAATGACTTGGTTAGTAGTTCAACCAATGTGCATCAGAGACCATCATCTTTAGCTCAAAATCCATTGGCATCAGATGTTGAAAATCAACAGCCTGACCAACTTGTCACGCCTATGGATGTGTGCCCTGGAGAACCATCTACTTCTCATGCTTCTGCATCTGGTTTAAGTGGAGTTGAAATGCAGATTGACAGGGGGCAACCTAGCTCCAGATTACTGGGCAGTAGCTCCACTAGTAATCATGAGAGTTCTACTGCTAGAGATGATGTGCAAATGCCCTCACTGAGCAACAGCGTGCCGATTCCAGCAACATCTCAGCCTTCAGAACATGATGGCCGTCATGGTATGCCAATGAATTCGTTTACCACTTCTAGTGGATTAGATGTTCACATGATCCTAAGAAATTCAGAGGGTGGAAATCATCATCATGATCTCTTCAGTGACTCGCGTAGCTGGGAGCTTCCCTTTTTGCAGGGCTGGTTCATGGCCCAAAATCATACAGGTGCTTCTCCATCTATTCCGATTGATGTCGGCAGTTCTAGAGGATCAAATCGACATCATGCTTCTCGTCGTCATGTTGTGGGCTCATTACGTGGGGTTGGGAGTTCACTTCTAGGCCCCCAAATTGATGAAGCTGAGGTTCATGCTGCATCATTAGGTGTTGGATCTGAACTTACTACCTCACTGCTTGCTGCTGGAGCTGCTGAATTACCTTGCACAGTGAAGCTTAGAATATGGCGGCATGATATCAAGGATCCATGTGTTACATTGGAACCCGAGGCATGCCGGTTGACAATTTCTCATGCCGTTCTCTGCAGTGAAATGGGTGCCCATTTTTCCCCTTGTGGACGATTTCTGGTAGCATGTGTTGCCTGTTTGCTGCCTCAAACTGAAGGCGACCGTGGTAGCCAATTGCCTGTGCAGTATGATTCTGCAGGGGCCGGAACATCACCAACTCGTCACCCTCTCCCTTCTCACCGAGTTATTTATGAGCTCCGAGTTTACTCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCATTGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATATGGTCGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTATATACTATCTTGGAGGTCTATAGAGTATCGGACATGGAGCTGGTAAGAGTTCTTCCTAGTGCTGAAGATGAAGTAAACGTTGCATGCTTTCATCCTTCCCCTGGAGGTGGTCTTGTTTATGGGACCAAGGAAGGAAAGCTCAGGATCTTGCAGCACAATGGTGCAGATATCACAAGCACAGGGTTGAATTGCTTTATCGAGGAAAATATGCTTGAGATTCAGAGATATGCGCTGGAAGGCTGAACGATTGGTTGCCATGTGTTATGTGTACTTCTCCAGGAATTTTCCTCTGCAAAGTTTATCATTGTACAAGTGAGCCTCAAGGAAATCATCAGATTTCAGCAAAGTCATGGCAGATTCTCAAATGAGTTTGCTAGAGTGCCTTGGGGATAGGTCTGTGCAGAGGGAGTTGGAAGATGTAAATCAACACAACCATGTTGCTGCTGTCAAGTCATCACGATGCTGTAATTACAGAATTGTACATGTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTAACCCTTTTCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTTGTGTAGTCTTTTATTCCTTGACGGGGTACCAAATGCCAATGATTAAAGTAACTAATCATCAATTCATCTTTGGTTCAAAG]
[+] EMBL AK068360 [TCCCCTCGTCGTGGTGCATATATATATTGAAGGCCTGAAATGGCTGAACATTGGGCAGAAGGTTCAAAGCATGCTTCTGCACAAGCATCGTAATCTAGATATCAAGCAACATCTGCAAGATCTAGGCAAAGGAACATCTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAACAAAACACCAAGCTAAAAAACTTTGGAGCAAATCTCCAGGAAATGATGCTGATTCCAATGAACTAAGATATGCAGCTACAGATGCTAAACATGATATATATTCATGGGCAGAATCACAGTCCCTGCATCACTGGTCTGCCAAATATTGTCCTCTTTTGCCACCCCCCAGGTCTACTATCGCAGCTGCATTCAGCCCAGATGGGAAAACACTTGCATCTACACATGGTGATCATACTGTTAAAATAATTGACTATCAAACTGGGAAATGTTTGAAAGTGCTGAGTGGACATCGGCGCAC GCCTTGGGTGGTTAGATACCATCCATTACTTCCTGATATCCTTGCTAGCGGTAGTTTGGATCAGGAAGTCCGTCTTTGGGACGCTAAAACCTC AGACTGTATTGGATCTCAGGACTTCCATCGGCCAATTGCATCAATAGCATTTCATGCAAGGGGGGAGATTCTGGCAGTTGCATCAGGTCACAAACTGTACATATGGAACTACAATAAAAGAGATGAGGCTGCTGCTCCAACCATTATATTAAGAACCCGCCGCTCACTAAGAGCTGTCCATTTTCACCCCCATGGTGCTCCATATCTTCTTACTGCAGAGGTTAATAATCTTGATTCTGCGGACTCACCATTGACCCTTGCAACCTCTTCGGGCTATTCAAACTATCCCTCGGCTGTGTTTTTTGCAAATATTAATTCCAGAAACTGTCCACATCATGAGGCTAATTCATCATCACCTTGCTTGCTTTGGCCTGCATACCTCAGGGATGATGGAAGTTTATGTCTGATTCGCAATGACTTGGTTAGTAGTTCAACCAATGTGCATCAGAGACCATCATCTTTAGCTCAAAATCCATTGGCATCAGATGTTGAAAATCAACAGCCTGACCAACTTGTCACGCCTATGGATGTGTGCCCTGGAGAACCATCTACTTCTCATGCTTCTGCATCTGGTTTAAGTGGAGTTGAAATGCAGATTGACAGGGGGCAACCTAGCTCCAGATTACTGGGCAGTAGCTCCACTAGTAATCATGAGAGTTCTACTGCTAGAGATGATGTGCAAATGCCCTCACTGAGCAACAGCGTGCCGATTCCAGCAACATCTCAGCCTTCAGAACATGATGGCCGTCATGGTATGCCAATGAATTCGTTTACCACTTCTAGTGGATTAGATGTTCACATGATCCTAAGAAATTCAGAGGGTGGAAATCATCATCATGATCTCTTCAGTGACTCGCGTAGCTGGGAGCTTCCCTTTTTGCAGGGCTGGTTCATGGCCCAAAATCATACAGGTGCTTCTCCATCTATTCCGATTGATGTCGGCAGTTCTAGAGGATCAAATCGACATCATGCTTCTCGTCGTCATGTTGTGGGCTCATTACGTGGGGTTGGGAGTTCACTTCTAGGCCCCCAAATTGATGAAGCTGAGGTTCATGCTGCATCATTAGGTGTTGGATCTGAACTTACTACCTCACTGCTTGCTGCTGGAGCTGCTGAATTACCTTGCACAGTGAAGCTTAGAATATGGCGGCATGATATCAAGGATCCATGTGTTACATTGGAACCCGAGGCATGCCGGTTGACAATTTCTCATGCCGTTCTCTGCAGTGAAATGGGTGCCCATTTTTCCCCTTGTGGACGATTTCTGGTAGCATGTGTTGCCTGTTTGCTGCCTCAAACTGAAGGCGACCGTGGTAGCCAATTGCCTGTGCAGTATGATTCTGCAGGGGCCGGAACATCACCAACTCGTCACCCTCTCCCTTCTCACCGAGTTATTTATGAGCTCCGAGTTTACTCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCATTGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATATGGTCGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTATATACTATCTTGGAGGTCTATAGAGTATCGGACATGGAGCTGGTAAGAGTTCTTCCTAGTGCTGAAGATGAAGTAAACGTTGCATGCTTTCATCCTTCCCCTGGAGGTGGTCTTGTTTATGGGACCAAGGAAGGAAAGCTCAGGATCTTGCAGCACAATGGTGCAGATATCACAAGCACAGGGTTGAATTGCTTTATCGAGGAAAATATGCTTGAGATTCAGAGATATGCGCTGGAAGGCTGAACGATTGGTTGCCATGTGTTATGTGTACTTCTCCAGGAATTTTCCTCTGCAAAGTTTATCATTGTACAAGTGAGCCTCAAGGAAATCATCAGATTTCAGCAAAGTCATGGCAGATTCTCAAATGAGTTTGCTAGAGTGCCTTGGGGATAGGTCTGTGCAGAGGGAGTTGGAAGATGTAAATCAACACAACCATGTTGCTGCTGTCAAGTCATCACGATGCTGTAATTACAGAATTGTACATGTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTAACCCTTTTCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTTGTGTAGTCTTTTATTCCTTGACGGGGTACCAAATGCCAATGATTAAAGTAACTAATCATCAATTCATCTTTGGTTCAAAG]
[+] EMBL CB670445 [ GCTTCTGCACAAGCATCGTATTCTAGATATCAAGCAACATCTGCAAGATCTAGGCAAAGGAACATCTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAACAAAACACCAAGCTAAAAAACTTTGGAGCAAATCTCCAGGAAATGATGCTGATTCCAATGAACTAAGATATGCAGCTACAGATGCTAAACATGATATATATTCATGGGCAGAATCACAGTCCCTGCATCACTGGTCTGCCAAATATTGTCCTCTTTTGCCACCCCCCAGGTCTACTATCGCAGCTGCATTCAGCCCAGATGGGAAAACACTTGCATCTACACATGGTGATCATACTGTTAAAATAATTGACTATCAAACTGGGAAATGTTTGAAAGTGCTGAGTGGACATCGGCGCAC GCCTTGGGTGGTTAGATACCATCCATTACTTCCTGATATCCTTGCTAGCGGTAGTTTGGATCAGGAAGTCCGTCTTTGGGACGCTAAAACCTC AGACTGTATTGGATCTCAGGACTTCCATCGGCCAATTGCATCAATAGCATTTCATGCAAGGGGGGAGATTCTGGCAGTTGCATCAGGTCACAAACTGTACATATGGAACTACAATAAAAGAGATGAGGCTGCTGCTCCAACCATTATATTAAGAACCCGCCGCTCACTAAGAGCTGTCCATTTTCACCCCCATGGTGCTCCATATCTTCTTACTGCAGAGGTTAATAATCTTGATTCTGCGGACTCACCATTGACCCTTGCAACCTCTTCGGGCTATTCAAA ]
[+] EMBL BI801993 [ TGCTGAGTGGACATCGGCGCACAGCCTTGGGTGGTTAGATACCATCCATTACTTCCTGATATCCTTGCTA CGGTAGTTTGGATCAGGAAGTCCGTCTTTGGGACGCTAAAACCTCAAGACTGTATTGGATCTCAGGACTTCCATCGGCCAATTGCATCAATAGCATTTCATGCAAGGGGGGAGATTCTGCCA TTGCATCAGGTCACAAACTGTACATATGGAACTACAAAAA ]
[+] EMBL CF306321 [ ACAAACTGTACATATGGAACTACAATAAAAGAGATGAGGCTGCTGCTCCAACCATTATATTAAGAACCCGCCGCTCACTAAGAGCTGTCCATTTTCACCCCCATGGTGCTCCATATCTTCTTACTGCAGAGGTTAATAATCTTGATTCTGCGGACTCACCATTGACCCTTGCAACCTCTTCGGGCTATTCAAACTATCCCTCGGCTGTGTTTTTTGCAAATATTAATTCCAGAAACTGTCCACATCATGAGGCTAATTCATCATCACCTTGCTTGCTTTGGCCTGCATACCTCAGGGATGATGGAAGTTTATGTCTGATTCGCAATGACTTGGTTAGTAGTTCAACCAATGTGCATCAGAGACCATCATCTTTAGCTCAAAATCCATTGGCATCAGATGTTGAAAATCAACAGCCTGACCAACTTGTCACGCCTATGGATGTGTGCCCTGGAGAACCATCTACTTCTCATGCTTCTGCATCTGGTTTAAGTGGAGTTGAAATGCAGATTGACAGGGGGCAACCTAGCTCCAGATTACTGGGCAGTAGCTCCACTAGTAATCATGAGAGTTCTACTGCTAGAGATGATGTGCAAATGCCCTCCCTGAGCAACAGCGTGCCGATTCCAGCAACATCTCAGCCTTCAGAACATGATGGCCGTCATGGTATGCCA ]
[+] EMBL CF325571 [ AGGATCCATGTGTTACATTGGAACCCGAGGCATGCCGGTTGACAATTTCTCATGCCGTTCTCTGCAGTGAAATGGGTGCCCATTTTTTCCCTTGTGGACGATTTCTGGTAGCATGTGTTGCCTGTTTGCTGCCTCAAACTGAAGGCGACCGTGGTAGCCAATTGCCTGTGCAGTATGATTCTGCAGGGGCCGGAACATCACCAACTCGTCACCCTCTCCCTTCTCACCGAGTTATTTATGAGCTCCGAGTTTACTCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCATTGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATATGGTCGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTATATACTATCTTGGAGGTCTATAGAGTATCGGCCATGGAGCTGGTAAGAGTTCTTCCTAGTGCTGAAGATGAAGTAAACGTTGCATGCTTTCA ]
consensusID : consensus_11210#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 758 fasta sequence
[CTTCTCACCGAGTTATTTATGAGCTCCGAGTTTACTCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCATTGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATATGGTCGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTATATACTATCTTGGAGGTCTATAGAGTATCGGACATGGAGCTGGTAAGAGTTCTTCCTAGTGCTGAAGATGAAGTAAACGTTGCATGCTTTCATCCTTCCCCTGGAGGTGGTCTTGTTTATGGGACCAAGGAAGGAAAGCTCAGGATCTTGCAGCACAATGGTGCAGATATCACAAGCACAGGGTTGAATTGCTTTATCGAGGAAAATATGCTTGAGATTCAGAGATATGCGCTGGAAGGCTGAACGATTGGTTGCCATGTGTTATGTGTACTTCTCCAGGTCTGTGCAGAGGGAGTTGGAAGATGTAAATCAACACAACCATGTTGCTGCTGTCAAGTCATCACGATGCTGTAATTACAGAATTGTACATGTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTAACCCTTTTCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTTGTGTAGTCTTTTATTCCTTGACGGGGTACCAAATGCCAATGATTAAAGTAACTAATCATCAATTCATCTTTGGT]
[-] EMBL CB670446 [CTTCTCACCGAGTTATTTATGAGCTCCGAGTTTACTCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCATTGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATATGGTCGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTATATACTATCTTGGAGGTCTATAGAGTATCGGACATGGAGCTGGTAAGAGTTCTTCCTAGTGCTGAAGATGAAGTAAACGTTGCATGCTTTCATCCTTCCCCTGGAGGTGGTCTTGTTTATGGGACCAAGGAAGGAAAGCTCAGGATCTTGCAGCACAATGGTGCAGATATCACAAGCACAGGGTTGAATTGCTTTATCGAGGAAAATATGCTTGAGATTCAGAGATATGCGCTGGAAGGCTGAACGATTGGTTGCCATGTGTTATGTGTACTTCTCCAGGTCTGTGCAGAGGGAGTTGGAAGATGTAAATCAACACAACCATGTTGCTGCTGTCAAGTCATCACGATGCTGTAATTACAGAATTGTACATGTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTAACCCTTTTCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTTGTGTAGTCTTTTATTCCTTGACGGGGTACCAAATGCCAATGATTAAAGTAACTAATCATCAATTCATCTTTGGT]
[+] EMBL AA751666 [ cgAGGTCTGTGCAGAGGGAGTTGGAAGATGTAAA CAACACAACCATGTTGCTGCTGTCAAGTCATCACGATGCTGTAATTACAGAATTGTACATGTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTAACCCTTTNCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTNGTGTAGTCTTTTATTCCTTGACGGGGTACCAAATGCNAATGATTAAAGTAACTAATCATCAATTCATCTT ]
consensusID : consensus_11210#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence
[CAATTTCAGGGTAACATTCATCTTGAATGCAATGTGCAAAAGCTCCTTTGACCAACACATGNTTGTTATCATAATACTTAAGTACTGCGGGAATAGCTTAATGGCAAATGCAACTCCCTGATAGAGTAGCACCATCAGTGTTAATGCCACCATTGAGCCATTGTGGTATTCCCATGGCCCCCTCCAAAAATAAACTGCATGAGGGGTCATCTTCTGGATAATATAAAAACATTTTCAGTAACCTGTTTTCTAATGGCATTATAATATGAGATCACTTGTTAAATATATAACCTTTGGTTTGCCCATTATTGTCAGGAACATCTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAACAAAACACCAAGCTAAAAAACTTTGGAGCAAATCTCCAGGAAATGATGCTGATTCCAATGAACTAAGATATGCAGCTACAGATGCTAAACATGATATATATTCATGGTACGGGGTCTTACTTTACCAGGATGGTTTAAGCACAATTTGTCATGTCTGTAGTAATGATTGAGTTACATATATTGTACTTTCGATTTTACACCTAATATTTCTTTGGTAAATATTTATAAACCCTATGAACTATTCTTCATTGTCTATCTTAACTGTTGAGTTACATAGTTTTGTACTCTCACTCTTATACCTAACTTTTCCCTGGAATGAAACCTTTTCTGTAAAA]
[-] EMBL CA760193 [CAATTTCAGGGTAACATTCATCTTGAATGCAATGTGCAAAAGCTCCTTTGACCAACACATGNTTGTTATCATAATACTTAAGTACTGCGGGAATAGCTTAATGGCAAATGCAACTCCCTGATAGAGTAGCACCATCAGTGTTAATGCCACCATTGAGCCATTGTGGTATTCCCATGGCCCCCTCCAAAAATAAACTGCATGAGGGGTCATCTTCTGGATAATATAAAAACATTTTCAGTAACCTGTTTTCTAATGGCATTATAATATGAGATCACTTGTTAAATATATAACCTTTGGTTTGCCCATTATTGTCAGGAACATCTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAACAAAACACCAAGCTAAAAAACTTTGGAGCAAATCTCCAGGAAATGATGCTGATTCCAATGAACTAAGATATGCAGCTACAGATGCTAAACATGATATATATTCATGGTACGGGGTCTTACTTTACCAGGATGGTTTAAGCACAATTTGTCATGTCTGTAGTAATGATTGAGTTACATATATTGTACTTTCGATTTTACACCTAATATTTCTTTGGTAAATATTTATAAACCCTATGAACTATTCTTCATTGTCTATCTTAACTGTTGAGTTACATAGTTTTGTACTCTCACTCTTATACCTAACTTTTCCCTGGAATGAAACCTTTTCTGTAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11210#0 TCCCCTCGTCGTGGTGCATATATATATTGAAGGCCTGAAATGGCTGAACATTGGGCAGAA 60
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GGTTCAAAGCATGCTTCTGCACAAGCATCGTAATCTAGATATCAAGCAACATCTGCAAGA 120
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TCTAGGCAAAGGAACATCTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAACAAAA 180
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 CACCAAGCTAAAAAACTTTGGAGCAAATCTCCAGGAAATGATGCTGATTCCAATGAACTA 240
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 AGATATGCAGCTACAGATGCTAAACATGATATATATTCATGGGCAGAATCACAGTCCCTG 300
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 CATCACTGGTCTGCCAAATATTGTCCTCTTTTGCCACCCCCCAGGTCTACTATCGCAGCT 360
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GCATTCAGCCCAGATGGGAAAACACTTGCATCTACACATGGTGATCATACTGTTAAAATA 420
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 ATTGACTATCAAACTGGGAAATGTTTGAAAGTGCTGAGTGGACATCGGCGCACGCCTTGG 480
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GTGGTTAGATACCATCCATTACTTCCTGATATCCTTGCTAGCGGTAGTTTGGATCAGGAA 540
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GTCCGTCTTTGGGACGCTAAAACCTCAGACTGTATTGGATCTCAGGACTTCCATCGGCCA 600
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 ATTGCATCAATAGCATTTCATGCAAGGGGGGAGATTCTGGCAGTTGCATCAGGTCACAAA 660
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 CTGTACATATGGAACTACAATAAAAGAGATGAGGCTGCTGCTCCAACCATTATATTAAGA 720
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 ACCCGCCGCTCACTAAGAGCTGTCCATTTTCACCCCCATGGTGCTCCATATCTTCTTACT 780
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GCAGAGGTTAATAATCTTGATTCTGCGGACTCACCATTGACCCTTGCAACCTCTTCGGGC 840
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TATTCAAACTATCCCTCGGCTGTGTTTTTTGCAAATATTAATTCCAGAAACTGTCCACAT 900
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 CATGAGGCTAATTCATCATCACCTTGCTTGCTTTGGCCTGCATACCTCAGGGATGATGGA 960
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 AGTTTATGTCTGATTCGCAATGACTTGGTTAGTAGTTCAACCAATGTGCATCAGAGACCA 1020
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TCATCTTTAGCTCAAAATCCATTGGCATCAGATGTTGAAAATCAACAGCCTGACCAACTT 1080
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GTCACGCCTATGGATGTGTGCCCTGGAGAACCATCTACTTCTCATGCTTCTGCATCTGGT 1140
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TTAAGTGGAGTTGAAATGCAGATTGACAGGGGGCAACCTAGCTCCAGATTACTGGGCAGT 1200
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 AGCTCCACTAGTAATCATGAGAGTTCTACTGCTAGAGATGATGTGCAAATGCCCTCACTG 1260
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 AGCAACAGCGTGCCGATTCCAGCAACATCTCAGCCTTCAGAACATGATGGCCGTCATGGT 1320
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 ATGCCAATGAATTCGTTTACCACTTCTAGTGGATTAGATGTTCACATGATCCTAAGAAAT 1380
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TCAGAGGGTGGAAATCATCATCATGATCTCTTCAGTGACTCGCGTAGCTGGGAGCTTCCC 1440
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TTTTTGCAGGGCTGGTTCATGGCCCAAAATCATACAGGTGCTTCTCCATCTATTCCGATT 1500
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GATGTCGGCAGTTCTAGAGGATCAAATCGACATCATGCTTCTCGTCGTCATGTTGTGGGC 1560
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TCATTACGTGGGGTTGGGAGTTCACTTCTAGGCCCCCAAATTGATGAAGCTGAGGTTCAT 1620
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GCTGCATCATTAGGTGTTGGATCTGAACTTACTACCTCACTGCTTGCTGCTGGAGCTGCT 1680
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GAATTACCTTGCACAGTGAAGCTTAGAATATGGCGGCATGATATCAAGGATCCATGTGTT 1740
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 ACATTGGAACCCGAGGCATGCCGGTTGACAATTTCTCATGCCGTTCTCTGCAGTGAAATG 1800
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 GGTGCCCATTTTTCCCCTTGTGGACGATTTCTGGTAGCATGTGTTGCCTGTTTGCTGCCT 1860
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 CAAACTGAAGGCGACCGTGGTAGCCAATTGCCTGTGCAGTATGATTCTGCAGGGGCCGGA 1920
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 ACATCACCAACTCGTCACCCTCTCCCTTCTCACCGAGTTATTTATGAGCTCCGAGTTTAC 1980
consensus_11210#1 -------------------------CTTCTCACCGAGTTATTTATGAGCTCCGAGTTTAC 35
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCAT 2040
consensus_11210#1 TCTCTTGAGGAGGCAACGTTTGGCAAAGTTCTTACATCAAGAGCGATAAGGGCAGCTCAT 95
consensus_11210#2 -------------CAATTTCAGGGTAA---CATTCATCTTGAATGCAATGTGCAAAAGCT 44
*** * ** ** * * **** ** * * * *** *
consensus_11210#0 TGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATA---TGGT 2097
consensus_11210#1 TGCTTAACTTCCATCCAGTTCTCACCCACTTCAGAGCACATACTATTGGCATA---TGGT 152
consensus_11210#2 CCTTTGACCAACACATGNTTGTTATCA--TAATACTTAAGTACTGCGGGAATAGCTTAAT 102
** ** ** ** * * * * * **** ** *** * *
consensus_11210#0 CGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTA 2157
consensus_11210#1 CGTCGTCATAACTCTATGCTTAGGAGCATTGTGATGGATGGGGAAACTGGAATTCCTGTA 212
consensus_11210#2 GGCAAATGCAACTCCCTGAT--AGAGTAGCACCATCAGTGTTAATGCCACCATTGAGCCA 160
* ***** ** * *** * ** ** * * *** *
consensus_11210#0 T-ATACTATCTTGGAGGTCTATAGAGTATCGGACATGGAGCTGGTAAGAGTTCTTCCTAG 2216
consensus_11210#1 T-ATACTATCTTGGAGGTCTATAGAGTATCGGACATGGAGCTGGTAAGAGTTCTTCCTAG 271
consensus_11210#2 TTGTGGTATTCCCATGGCCCCC-----TCCAAAAATAAACTGCATGAGGGGTCATCTT-- 213
* * *** ** * * * ** * * ** * ** ** *
consensus_11210#0 TGCTGAAGATGAAGTAAACGTTGCATGCTTTCATCCTTCCCCTGGAGGTGGTCTTGTTTA 2276
consensus_11210#1 TGCTGAAGATGAAGTAAACGTTGCATGCTTTCATCCTTCCCCTGGAGGTGGTCTTGTTTA 331
consensus_11210#2 --CTGGATAATATAAAAACATT---TTCAGTAACCTGTTTTCTAATGGCATTATAAT--A 266
*** * * * **** ** * * * * * * ** ** * * * *
consensus_11210#0 TGGGACCAAGGAAGGAAAGCTCAGGATCTTGCAGCACAATGGTGCAGATATCACAAGCA- 2335
consensus_11210#1 TGGGACCAAGGAAGGAAAGCTCAGGATCTTGCAGCACAATGGTGCAGATATCACAAGCA- 390
consensus_11210#2 TGAGATCACTTGTTAAATATATAACCTTTGGTTTGCCCATTAT-----TGTCAGGAACAT 321
** ** ** ** * * * * * ** * * *** * **
consensus_11210#0 CAGGGTTGAATTGCTTTATCGAGGAAAATATGCTTGAGATTCAGAGATATGCGCTGGAAG 2395
consensus_11210#1 CAGGGTTGAATTGCTTTATCGAGGAAAATATGCTTGAGATTCAGAGATATGCGCTGGAAG 450
consensus_11210#2 CTTCGATCTATTAGCTCAGCGAGAGATTTCCCCTCGAA---CAAAACACCAAGCTAAAAA 378
* * * *** * * **** * * ** ** ** * *** **
consensus_11210#0 GCTGAACGATTGGTTGCCATGTGTTATGTGTACTTCTCCAGGAATTTTCCTCTGCAAAGT 2455
consensus_11210#1 GCTGAACGATTGGTTGCCATGTGTTATGTGTACTTCTCCAGG------------------ 492
consensus_11210#2 ACTTTGGAGCAAATCTCCAGGAAATG-ATGCTGATTCCAATGAACT-------------- 423
** * *** * * ** * * * *
consensus_11210#0 TTATCATTGTACAAGTGAGCCTCAAGGAAATCATCAGATTTCAGCAAAGTCATGGCAGAT 2515
consensus_11210#1 ------------------------------------------------------------
consensus_11210#2 ------------------------------------------------------------
consensus_11210#0 TCTCAAATGAGTTTGCTAGAGTGCCTTGGGGATAGGTCTGTGCAGAGGGAGTTGGAAGAT 2575
consensus_11210#1 ------------------------------------TCTGTGCAGAGGGAGTTGGAAGAT 516
consensus_11210#2 ----------------------------------AAGATATGCAGCTACAGATGCTAAAC 449
* ***** ** ** * *
consensus_11210#0 GTAAATCAACACAACCATGTTGCTGC-TGTCAAGTCATCACGATGCTGTAATTACAGAAT 2634
consensus_11210#1 GTAAATCAACACAACCATGTTGCTGC-TGTCAAGTCATCACGATGCTGTAATTACAGAAT 575
consensus_11210#2 ATGAT---ATATATTCATGGTACGGGGTCTTACTTTACCAGGATGGTTTAAGCACAATTT 506
* * * * * **** * * * * * * * * ** **** * *** *** *
consensus_11210#0 TGTACAT-----GTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTA 2689
consensus_11210#1 TGTACAT-----GTAATCTTTAATCAACTTAACTTGTATTTTAGAAAGCACACAATGCTA 630
consensus_11210#2 GTCATGTCTGTAGTAATGATTGAGTTACATATATTGTACTTTCGATTTTACAC----CTA 562
* * ***** ** * ** ** ***** *** ** **** ***
consensus_11210#0 ACCCTTTTCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTTGTGTAG 2749
consensus_11210#1 ACCCTTTTCTTTTCAATGGCAGAGGTATTTATTGTTCCCCTTGTATTTTTCGTTGTGTAG 690
consensus_11210#2 ATATTTCTTTGGTAAATATTTATAAACCCTATGAACTATTCTTCATTGTCTATCTTA-AC 621
* ** * * * *** *** * *** * * * *
consensus_11210#0 TCTTTTATTCCTTGACGGGGTAC-CAAATGCCAATGATTAAAGTAACTAATCATCAATTC 2808
consensus_11210#1 TCTTTTATTCCTTGACGGGGTAC-CAAATGCCAATGATTAAAGTAACTAATCATCAATTC 749
consensus_11210#2 TGTTGAGTTACATAGTTTTGTACTCTCACTCTTATACCTAACTTTTCCCTGGAATGAAAC 681
* ** ** * * **** * * * ** *** * * * * *
consensus_11210#0 ATCTTTGGTTCAAAG 2823
consensus_11210#1 ATCTTTGGT------ 758
consensus_11210#2 CTTTTCTGTAAAA-- 694
* ** **
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||