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Oryza sativa
cluster # 11214 cluster # 11214       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11214#0 length = 2538 sequences # 7  
consensus_11214#1 length = 514 sequences # 1  

consensusID : consensus_11214#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2538
fasta sequence
                              [TGGAGGATACCGGGGCGGCGGTGCGGCTGATTGACAGCGCCGGTGGAGGGATTGATTTCTCGGGGTTGGATACTGTAATGGTAGAGTCATCAATACATGGTGTCTCCGGAGGTGCTGTGATAAAAGGTCAGGAAGCAATGGCCATTGTTAGCCTGATGCTCTTTGTTGAATCCTTGCAAGTAACTATCAAAGCTGCTATGAAGCAAGACGAGGACTCACATGAACGATTAATCAGTCTTACAGAAACGATACTAGATGCTGACATTAATAAGTCATTGGTGAAATCAATACAAGATGTAATAGATGACGATGGCTCCATAAAAGACACTGCAAGCCCTGAGCTAAGACGATATCGAGAGCAAGTCCAGGTCCTAGAGAGCAGGTTGTATCAGCTTATGGACAAGTTGGTGCGAAATGCTGATAACGAAGCTTCTGTGAAGTATGCATTGTAAATGGAAGATGCTGCATAAAAGTAACAGGGGATAAGTCTTCACCTTTTGATGGATTACTACTCTCCAGTGGCACAGATGCTGGAAGTATGGTAGAACCAATTGTTGCAGTTCCACTGAATGATGAGCTACAGCAAGCAAGAGCTCTAGTGGCTAAAGCTGAACTGGATGCTTTATCGAAAATGACTGATAAGATTCTTCTTGAGCTTGATAATATTCGGATTTTACTGCAAGCAACAGTTGAACTTGATAAGGTTGCAGCTCGTGCAAAATATAGTATAGCATATGATGGTACATATCCTGATCTCTATTTACCCAACTTCGTAAATGGAACAGTCAGTACTGCTACAGGCGGGTCTATCAGTACAATTTCCTCAGCTCACCTCTCTAAGAAGGCATGGAAACTGTGCATGCCAAATGCATACCATCCATTATTGCTCCAACAACACCAGGAAAATCTGCATCGTGCAAAAAAGGATGTAGCAAGTGCCACAGCAGAAATCCGGAGGAGGAGGATATATGGACAAGACAATGTAGAAGAAGATCAACTGGCATCTGACCTCGATTTAATGAAAATTAGGGTCTCCCAGATGGAGAAAGACCGTCCAGTACCAGTAGATTTTTTCATTGCTGAAGGAACTACTGTATTGGTCATAACTGGTCCAAACACAGGGGGCAAAACAATCAGCTTGAAGACAGTTGGTCTGGCATCTTTAATGGCTAAAATAGGTTTATACATTCTAGCTTCTGAACCAGTAAAAATTCCGTGGTTCAATGCTGTTTATGCTGACATTGGAGATGAGCAGTCTTTGACACAATCACTCTCCACATTTTCTGGGCATCTAAAGCAGATCGGAGCCATTCGCGCAT-GGTCAACTTCACAATCCTTGGTTCTTTTGGATGAGGTTGGAGCTGGTACAAATCCACTTGAAGGAGCTGCTTTGGGGATGTCTCTTTTGGAATCTTTTGCTGAAGCTGGTTCCTTTCTGACTCTAGCAACAACTCATCATGGAGAACTTAAAACGTTAAAATATAGCAATGATTTGTTTGAGAACGCGTGCATGGAATTTGATGAAGATAATCTAAAGCCCACATTTCGGATTCTCTGGGGAATACCAGGACGTTCAAATGCAATCAATATTGCTGAAAGACTTGGTTTGCCCTCGGACATAATAGAAAGCTCACGACAGTTACTTGGAACAGCTGGTGCAGAGATAAACGCGTTGATAATGGACATGGAAAATTTCAAACAACAATATCAACATCATCTTCAAGAGGCACAATATTATGTTATGCAGTCCAAGGAGCTTCACAATAACTT-GGAAGTGGCACAGAAGAACATTATAGACCACACTTCTGCTCAAAG-AAAAAGAAAGGCGAGAGTAATTTCAGAGTATGCTGTTATGGCTCGTTCCATTATACGTAAGAAGTTTCAGCAGTTCCGCGAATCTGCAATAGCCAAAAGAGTGCTTGAAGAAGAGAAAGCTGTGCAGAACGACAAACCTGAGAGATTGAAGGACCCTGAACCAACGAGTACTCCTGCTGTCAAAAAGGCACAGAACACAAACATCAGCATGGCCACAACGACCGAAGGTGAAGATAATGGGATTCCGGAAGTTGGAGATTTA--TTATGTTCCTAAGCTCAAAAACGAAGCTACTGTTGTCAAAATAGACTCATCGAAGAACGAAGTGCAAGTCCAAGCTGGTATAATGAAGCTCAAACTAAAATTCAAAGATGTCAAGATTCAGAAGAGGATCTCCAGATAAAACGGCTGCGCTACCACCTGCATTGGCAGAGATAAGTATGTAAACCTTGTTTTTATACAGTTACATTGCTTTTCTCTGCCGCATCTCCATTCTCACTGTATACATCTAGTCATTTATACACAGCCATGCAATTGTAGTAGATCTTCAGTTTTCATGCAGCATGTTTCCATCATGTTATAGAAGTTAGAACCCGTAGAATTCATCTGGAATTGAACTTGAAATTGTTTGAACGATCGTTCGAAGCAAATTCGCTAACAAATAAAGAATGTCCGGGAATTTTGCACTAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF325435             [TGGAGGATACCGGGGCGGCGGTGCGGCTGATTGACAGCGCCGGTGGAGGGATTGATTTCTCGGGGTTGGATACTGTAATGGTAGAGTCATCAATACATGGTGTCTCCGGAGGTGCTGTGATAAAAGGTCAGGAAGCAATGGCCATTGTTAGCCTGATGCTCTTTGTTGAATCCTTGCAAGTAACTATCAAAGCTGCTATGAAGCAAGACGAGGACTCACATGAACGATTAATCAGTCTTACAGAAACGATACTAGATGCTGACATTAATAAGTCATTGGTGAAATCAATACAAGATGTAATAGATGACGATGGCTCCATAAAAGACACTGCAAGCCCTGAGCTAAGACGATATCGAGAGCAAGTCCAGGTCCTAGAGAGCAGGTTGTATCAGCTTATGGACAAGTTGGTGCGAAATGCTGATAACGAAGCTTCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF306020             [                                             GAGGGATTGATTTCTCGGGGTTGGATACTGTAATGGTAGAGTCAGCAATACATGGTGTCTCCGGAGGTGCTGTGATAAAAGGTCAGGAAGCAATGGCCATTGTTAGCCTGATGCTCTTTGTTGAATCCTTGCAAGTAACTATCAAAGCTGCTATGAAGCAAGACGAGGACTCACATGAACGATTAATCAGTCTTACAGAAACGATACTAGATGCTGACATTAATAAGTCATTGGTGAAATCAATACAAGATGTAATAGATGACGATGGCTCCATAAAAGACACTGCAAGCCCTGAGCTAAGACGATATCGAGAGCAAGTCCAGGTCCTAGAGAGCAGGTTGTATCAGCTTATGGACAAGTTGGTGCGAAATGCTGATAACGAAGCTTCTGTGAAGTATGCATTGTAAATGGAAGATGCTGCATAAAAGTAACAGGGGATAAGTCTTCACCTTTTGATGGATTACTACTCTCCAGTGGCACAGATGCTGGAAGTATGGTAGAACCAATTGTTGCAGTTCCACTGAATGATGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB676091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATTACTACTCTCCAGTGGCACAGATGCTGGAAGTATGGTAGAACCAATTGTTGCAGTTCCACTGAATGATGAGCTACAGCAAGCAAGAGCTCTAGTGGCTAAAGCTGAACTGGATGCTTTATCGAAAATGACTGATAAGATTCTTCTTGAGCTTGATAATATTCGGATTTTACTGCAAGCAACAGTTGAACTTGATAAGGTTGCAGCTCGTGCAAAATATAGTATAGCATATGATGGTACATATCCTGATCTCTATTTACCCAACTTCGTAAATGGAACAGTCAGTACTGCTACAGGCGGGTCTATCAGTACAATTTCCTCAGCTCACCTCTCTAAGAAGGCATGGAAACTGTGCATGCCAAATGCATACCATCCATTATTGCTCCAACAACACCAGGAAAATCTGCATCGTGCAAAAAAGGATGTAGCAAGTGCCACAGCAGAAATCCGGAGGAGGAGGATATATGGACAAGACAATGTAGAAGAAGATCAACTGGCATCTGACCTCGATTTAATGAAAATTAGGGTCTCCCAGATGGAGAAAGACCGTCCAGTACCAGTAGATTTTTTCATTGCTGAAGGAACTACTGTATTGGTCATAACTGGTCCAAACACAGGGGGCAAAACAATCAGCTTGAAGACAGTTGGTCTGGCATCTTTAATGGCTAAAATAGGTTTATACATTCTAGCTTCTGAACCAGTAAAAATTCCGTGGTTCAATGCTGTTTATGCTGACATTGGAGATGAGCAGTCTTTGACACAATCACTCTCCACATTTTCTGGGCATCTAAAGCAGATCGGAGCCATTCGCGCATGGGTC ACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK105809             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTGGCTAAAGCTGAACTGGATGCTTTATCGAAAATGACTGATAAGATTCTTCTTGAGCTTGATAATATTCGGATTTTACTGCAAGCAACAGTTGAACTTGATAAGGTTGCAGCTCGTGCAAAATATAGTATAGCATATGATGGTACATATCCTGATCTCTATTTACCCAACTTCGTAAATGGAACAGTCAGTACTGCTACAGGCGGGTCTATCAGTACAATTTCCTCAGCTCACCTCTCTAAGAAGGCATGGAAACTGTGCATGCCAAATGCATACCATCCATTATTGCTCCAACAACACCAGGAAAATCTGCATCGTGCAAAAAAGGATGTAGCAAGTGCCACAGCAGAAATCCGGAGGAGGAGGATATATGGACAAGACAATGTAGAAGAAGATCAACTGGCATCTGACCTCGATTTAATGAAAATTAGGGTCTCCCAGATGGAGAAAGACCGTCCAGTACCAGTAGATTTTTTCATTGCTGAAGGAACTACTGTATTGGTCATAACTGGTCCAAACACAGGGGGCAAAACAATCAGCTTGAAGACAGTTGGTCTGGCATCTTTAATGGCTAAAATAGGTTTATACATTCTAGCTTCTGAACCAGTAAAAATTCCGTGGTTCAATGCTGTTTATGCTGACATTGGAGATGAGCAGTCTTTGACACAATCACTCTCCACATTTTCTGGGCATCTAAAGCAGATCGGAGCCATTCGCGCAT GGTCAACTTCACAATCCTTGGTTCTTTTGGATGAGGTTGGAGCTGGTACAAATCCACTTGAAGGAGCTGCTTTGGGGATGTCTCTTTTGGAATCTTTTGCTGAAGCTGGTTCCTTTCTGACTCTAGCAACAACTCATCATGGAGAACTTAAAACGTTAAAATATAGCAATGATTTGTTTGAGAACGCGTGCATGGAATTTGATGAAGATAATCTAAAGCCCACATTTCGGATTCTCTGGGGAATACCAGGACGTTCAAATGCAATCAATATTGCTGAAAGACTTGGTTTGCCCTCGGACATAATAGAAAGCTCACGACAGTTACTTGGAACAGCTGGTGCAGAGATAAACGCGTTGATAATGGACATGGAAAATTTCAAACAACAATATCAACATCATCTTCAAGAGGCACAATATTATGTTATGCAGTCCAAGGAGCTTCACAATAACTT GGAAGTGGCACAGAAGAACATTATAGACCACACTTCTGCTCAAAG AAAAAGAAAGGCGAGAGTAATTTCAGAGTATGCTGTTATGGCTCGTTCCATTATACGTAAGAAGTTTCAGCAGTTCCGCGAATCTGCAATAGCCAAAAGAGTGCTTGAAGAAGAGAAAGCTGTGCAGAACGACAAACCTGAGAGATTGAAGGACCCTGAACCAACGAGTACTCCTGCTGTCAAAAAGGCACAGAACACAAACATCAGCATGGCCACAACGACCGAAGGTGAAGATAATGGGATTCCGGAAGTTGGAGATTTA  TTATGTTCCTAAGCTCAAAAACGAAGCTACTGTTGTCAAAATAGACTCATCGAAGAACGAAGTGCAAGTCCAAGCTGGTATAATGAAGCTCAAACTAAAATTCAAAGATGTCAAGATTCAGAAGAGGATCTCCAGATAAAACGGCTGCGCTACCACCTGCATTGGCAGAGATAAGTATGTAAACCTTGTTTTTATACAGTTACATTGCTTTTCTCTGCCGCGTCTCCATTCTCACTGTATACATCTAGTCATTTATACACAGCCATGCAATTGTAGTAGATCTTCAGTTTTCATGCAGCATGTTTCCATCATGTTATAGAAGTTAGAACCCGTAGAATCCATCTGGAATTGAACTTGAAATTGTTTGAACGATCGTTCGAAGCAAATTCGCTAACAAATAAAGAATGTCCG                                                  ]
[+] EMBL CA764114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACAGTTGGTCTGGCATCTTTAATGGCTAAAATAGGTTTATACATTCTAGCTTCTGAACCAGTAAAAATTCCGTGGTTCAATGCTGTTTATGCTGACATTGGAGATGAGCAGTCTTTGACACAATCACTCTCCACATTTTCTGGGCATCTAAAGCAGATCGGAGCCATTCGCGCAT GGTCAACTTCACAATCCTTGGTTCTTTTGGATGAGGTTGGAGCTGGTACAAATCCACTTGAAGGAGCTGCTTTGGGGATGTCTCTTTTGGAATCTTTTGCTGAAGCTGGTTCCTTTCTGACTCTAGCAACAACTCATCATGGAGAACTTAAAACGTTAAAATATAGCAATGATTTGTTTGAGAACGCGTGCATGGAATTTGATGAAGATAATCTAAAGCCCACATTTCGGATTCTCTGGGGAATACCAGGACGTTCAAATGCAATCAATATTGCTGAAAGACTTGGTTTGCCCTCGGACATAATAGAAAGCTCACGACAGTTACTTGGAACAGCTGGTGCAGAGATAAACGCGTTGATAATGGACATGGAAAATTTCAAACAACAATATCAACATCATCTTCAAGAGGCACAATATTATGNTATGCAGTCCAAGGAGCTTCACAATAACTTGGGAAGTGGCACAGAAGAACATTATAGACCACACTTCTGCTCAAAGAAAAAAGAAAGGCGAGAGTAATTTCAGAGTATGCTGGTATGGCTCGGTNCATTATACGTAAGAAGTTTCAGCAGTTCCGGGAATCTGCAATAGCC AAAGAGTGCTTGAA AAAANAAAGCTGGGCAGAACGAC AACCTGGGAGA TGAAGGACCCTG ACCAACGAGTACTNCTGCTGGC AAAAGG NCAGAACAC AACATTAGCATGGNCNCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB676092             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCAAACAACAATATCAACATCATCTTCAAGAGGCACAATATTATGTTATGCAGTCCAAGGAGCTTCACAATAACTT GGAAGTGGCACAGAAGAACATTATAGACCACACTTCTGCTCAAAG AAAAAGAAAGGCGAGAGTAATTTCAGAGTATGCTGTTATGGCTCGTTCCATTATACGTAAGAAGTTTCAGCAGTTCCGCGAATCTGCAATAGCCAAAAGAGTGCTTGAAGAAGAGAAAGCTGTGCAGAACGACAAACCTGAGAGATTGAAGGACCCTGAACCAACGAGTACTCCTGCTGTCAAAAAGGCACAGAACACAAACATCAGCATGGCCACAACGACCGAAGGTGAAGATAATGGGATTCCGGAAGTTGGAGATTTAGTTTATGTTCCTAAGCTCAAAAACGAAGCTACTGTTGTCAAAATAGACTCATCGAAGAACGAAGTGCAAGTCCAAGCTGGTATAATGAAGCTCAAACTAAAATTCAAAGATGTCAAGATTCAGAAGAGGATCTCCAGATAAAACGGCTGCGCTACCACCTGCATTGGCAGAGATAAGTATGTAAACCTTGTTTTTATACAGTTACATTGCTTTTCTCTGCCGCATCTCCATTCTCACTGTATACATCTAGTCATTTATACACAGCCATGCAATTGTAGTAGATCTTCAGTTTTCATGCAGCATGTTTCCATCATGTTATAGAAGTTAGAACCCGTAGAATTCATCTGGAATTGAACTTGAAATTGTTTGAACGATCGTTCGAAGCAAATTCGCTAACAAATAAAGAATGTCCGGGAATTTTGCAC                                      ]
[-] EMBL CF276609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGAAGTTGGAGATTTAGTTTATGTTCCTAAGCTCAAAAACGAAGCTACTGTTGTCAAAATAGACTCATCGAAGAACGAAGTGCAAGTCCAAGCTGGTATAATGAAGCTCAAACTAAAATTCAAAGATGTCAAGATTCAGAAGAGGATCTCCAGATAAAACGGGTGCGGTACCACCTGCATTGGCAGAGATAAGTATGTAAACCTTGTTTTTATACAGTTACATTGGTTTTTTTTGCCGCATTTCCATTTTCCCTGTATACATCTAGTCATTTATACACAGCCATGCAATTGTAGTAGATTTTCAGTTTTCATGCAGCATGTTTCCATCATGTTATAGAAGTTAGAACCCGTAGAATTCATTTGGAATTGAACTTGAAATTGTTTGAACGATCGTTTGAAGCAAATTCGCTAACAAATAAAGAATGTCCGGGAATTTTGCCCTAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAA]


>consensus_11214#0 TGGAGGATACCGGGGCGGCGGTGCGGCTGATTGACAGCGCCGGTGGAGGGATTGATTTCT CGGGGTTGGATACTGTAATGGTAGAGTCATCAATACATGGTGTCTCCGGAGGTGCTGTGA TAAAAGGTCAGGAAGCAATGGCCATTGTTAGCCTGATGCTCTTTGTTGAATCCTTGCAAG TAACTATCAAAGCTGCTATGAAGCAAGACGAGGACTCACATGAACGATTAATCAGTCTTA CAGAAACGATACTAGATGCTGACATTAATAAGTCATTGGTGAAATCAATACAAGATGTAA TAGATGACGATGGCTCCATAAAAGACACTGCAAGCCCTGAGCTAAGACGATATCGAGAGC AAGTCCAGGTCCTAGAGAGCAGGTTGTATCAGCTTATGGACAAGTTGGTGCGAAATGCTG ATAACGAAGCTTCTGTGAAGTATGCATTGTAAATGGAAGATGCTGCATAAAAGTAACAGG GGATAAGTCTTCACCTTTTGATGGATTACTACTCTCCAGTGGCACAGATGCTGGAAGTAT GGTAGAACCAATTGTTGCAGTTCCACTGAATGATGAGCTACAGCAAGCAAGAGCTCTAGT GGCTAAAGCTGAACTGGATGCTTTATCGAAAATGACTGATAAGATTCTTCTTGAGCTTGA TAATATTCGGATTTTACTGCAAGCAACAGTTGAACTTGATAAGGTTGCAGCTCGTGCAAA ATATAGTATAGCATATGATGGTACATATCCTGATCTCTATTTACCCAACTTCGTAAATGG AACAGTCAGTACTGCTACAGGCGGGTCTATCAGTACAATTTCCTCAGCTCACCTCTCTAA GAAGGCATGGAAACTGTGCATGCCAAATGCATACCATCCATTATTGCTCCAACAACACCA GGAAAATCTGCATCGTGCAAAAAAGGATGTAGCAAGTGCCACAGCAGAAATCCGGAGGAG GAGGATATATGGACAAGACAATGTAGAAGAAGATCAACTGGCATCTGACCTCGATTTAAT GAAAATTAGGGTCTCCCAGATGGAGAAAGACCGTCCAGTACCAGTAGATTTTTTCATTGC TGAAGGAACTACTGTATTGGTCATAACTGGTCCAAACACAGGGGGCAAAACAATCAGCTT GAAGACAGTTGGTCTGGCATCTTTAATGGCTAAAATAGGTTTATACATTCTAGCTTCTGA ACCAGTAAAAATTCCGTGGTTCAATGCTGTTTATGCTGACATTGGAGATGAGCAGTCTTT GACACAATCACTCTCCACATTTTCTGGGCATCTAAAGCAGATCGGAGCCATTCGCGCATG GTCAACTTCACAATCCTTGGTTCTTTTGGATGAGGTTGGAGCTGGTACAAATCCACTTGA AGGAGCTGCTTTGGGGATGTCTCTTTTGGAATCTTTTGCTGAAGCTGGTTCCTTTCTGAC TCTAGCAACAACTCATCATGGAGAACTTAAAACGTTAAAATATAGCAATGATTTGTTTGA GAACGCGTGCATGGAATTTGATGAAGATAATCTAAAGCCCACATTTCGGATTCTCTGGGG AATACCAGGACGTTCAAATGCAATCAATATTGCTGAAAGACTTGGTTTGCCCTCGGACAT AATAGAAAGCTCACGACAGTTACTTGGAACAGCTGGTGCAGAGATAAACGCGTTGATAAT GGACATGGAAAATTTCAAACAACAATATCAACATCATCTTCAAGAGGCACAATATTATGT TATGCAGTCCAAGGAGCTTCACAATAACTTGGAAGTGGCACAGAAGAACATTATAGACCA CACTTCTGCTCAAAGAAAAAGAAAGGCGAGAGTAATTTCAGAGTATGCTGTTATGGCTCG TTCCATTATACGTAAGAAGTTTCAGCAGTTCCGCGAATCTGCAATAGCCAAAAGAGTGCT TGAAGAAGAGAAAGCTGTGCAGAACGACAAACCTGAGAGATTGAAGGACCCTGAACCAAC GAGTACTCCTGCTGTCAAAAAGGCACAGAACACAAACATCAGCATGGCCACAACGACCGA AGGTGAAGATAATGGGATTCCGGAAGTTGGAGATTTATTATGTTCCTAAGCTCAAAAACG AAGCTACTGTTGTCAAAATAGACTCATCGAAGAACGAAGTGCAAGTCCAAGCTGGTATAA TGAAGCTCAAACTAAAATTCAAAGATGTCAAGATTCAGAAGAGGATCTCCAGATAAAACG GCTGCGCTACCACCTGCATTGGCAGAGATAAGTATGTAAACCTTGTTTTTATACAGTTAC ATTGCTTTTCTCTGCCGCATCTCCATTCTCACTGTATACATCTAGTCATTTATACACAGC CATGCAATTGTAGTAGATCTTCAGTTTTCATGCAGCATGTTTCCATCATGTTATAGAAGT TAGAACCCGTAGAATTCATCTGGAATTGAACTTGAAATTGTTTGAACGATCGTTCGAAGC AAATTCGCTAACAAATAAAGAATGTCCGGGAATTTTGCACTAAAAAAAAAAAAAAAAAGA AAAAAAAAAAAAAAAAAA



consensusID : consensus_11214#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence
                              [ACAATATCAACATCATCTTCAAGAGGCACAATATTATGTTATGTGAGAAATTCTCTACCTAGACTTGTGTACTTTACATTGAGAATGCTGCAATTCTCTTTCCCAGCCAACACATTCTTGTTTGGATATAATGTGACATATACAACCTTTTGAGTTTTCAATAGAAAAAGGTAAATAACTGATTTTAAGTTATGTTGTTCAATCATGGTTTGCATCTATATGTCGATCTGCCTTTCCGAGTGAACTTTTAGTTCCACCACATAGGATCTTAGATTCTTTCTGATGTATTAGATTGTATGTGTGTTCATGTGACTATTAGATTCTCTCTGATGTATTAGATTGTACATGTGTTCATGTGACTATCATGTGTAACTGAATTAGCATCTGTCCTGCTTATTAGGTCGAACTTTTCATATTAATTATGCATGTGTTCATTGACGTGTATCAGGCAGTCCAAGGAGCTTCACAATAACTTGGAAGTGGCACAGAAGAACATTATAGACCACACTTCTGC]

[+] EMBL CF276610             [ACAATATCAACATCATCTTCAAGAGGCACAATATTATGTTATGTGAGAAATTCTCTACCTAGACTTGTGTACTTTACATTGAGAATGCTGCAATTCTCTTTCCCAGCCAACACATTCTTGTTTGGATATAATGTGACATATACAACCTTTTGAGTTTTCAATAGAAAAAGGTAAATAACTGATTTTAAGTTATGTTGTTCAATCATGGTTTGCATCTATATGTCGATCTGCCTTTCCGAGTGAACTTTTAGTTCCACCACATAGGATCTTAGATTCTTTCTGATGTATTAGATTGTATGTGTGTTCATGTGACTATTAGATTCTCTCTGATGTATTAGATTGTACATGTGTTCATGTGACTATCATGTGTAACTGAATTAGCATCTGTCCTGCTTATTAGGTCGAACTTTTCATATTAATTATGCATGTGTTCATTGACGTGTATCAGGCAGTCCAAGGAGCTTCACAATAACTTGGAAGTGGCACAGAAGAACATTATAGACCACACTTCTGC]


>consensus_11214#1 ACAATATCAACATCATCTTCAAGAGGCACAATATTATGTTATGTGAGAAATTCTCTACCT AGACTTGTGTACTTTACATTGAGAATGCTGCAATTCTCTTTCCCAGCCAACACATTCTTG TTTGGATATAATGTGACATATACAACCTTTTGAGTTTTCAATAGAAAAAGGTAAATAACT GATTTTAAGTTATGTTGTTCAATCATGGTTTGCATCTATATGTCGATCTGCCTTTCCGAG TGAACTTTTAGTTCCACCACATAGGATCTTAGATTCTTTCTGATGTATTAGATTGTATGT GTGTTCATGTGACTATTAGATTCTCTCTGATGTATTAGATTGTACATGTGTTCATGTGAC TATCATGTGTAACTGAATTAGCATCTGTCCTGCTTATTAGGTCGAACTTTTCATATTAAT TATGCATGTGTTCATTGACGTGTATCAGGCAGTCCAAGGAGCTTCACAATAACTTGGAAG TGGCACAGAAGAACATTATAGACCACACTTCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11214#0      TGGAGGATACCGGGGCGGCGGTGCGGCTGATTGACAGCGCCGGTGGAGGGATTGATTTCT 60
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      CGGGGTTGGATACTGTAATGGTAGAGTCATCAATACATGGTGTCTCCGGAGGTGCTGTGA 120
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TAAAAGGTCAGGAAGCAATGGCCATTGTTAGCCTGATGCTCTTTGTTGAATCCTTGCAAG 180
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TAACTATCAAAGCTGCTATGAAGCAAGACGAGGACTCACATGAACGATTAATCAGTCTTA 240
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      CAGAAACGATACTAGATGCTGACATTAATAAGTCATTGGTGAAATCAATACAAGATGTAA 300
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TAGATGACGATGGCTCCATAAAAGACACTGCAAGCCCTGAGCTAAGACGATATCGAGAGC 360
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      AAGTCCAGGTCCTAGAGAGCAGGTTGTATCAGCTTATGGACAAGTTGGTGCGAAATGCTG 420
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      ATAACGAAGCTTCTGTGAAGTATGCATTGTAAATGGAAGATGCTGCATAAAAGTAACAGG 480
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GGATAAGTCTTCACCTTTTGATGGATTACTACTCTCCAGTGGCACAGATGCTGGAAGTAT 540
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GGTAGAACCAATTGTTGCAGTTCCACTGAATGATGAGCTACAGCAAGCAAGAGCTCTAGT 600
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GGCTAAAGCTGAACTGGATGCTTTATCGAAAATGACTGATAAGATTCTTCTTGAGCTTGA 660
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TAATATTCGGATTTTACTGCAAGCAACAGTTGAACTTGATAAGGTTGCAGCTCGTGCAAA 720
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      ATATAGTATAGCATATGATGGTACATATCCTGATCTCTATTTACCCAACTTCGTAAATGG 780
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      AACAGTCAGTACTGCTACAGGCGGGTCTATCAGTACAATTTCCTCAGCTCACCTCTCTAA 840
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GAAGGCATGGAAACTGTGCATGCCAAATGCATACCATCCATTATTGCTCCAACAACACCA 900
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GGAAAATCTGCATCGTGCAAAAAAGGATGTAGCAAGTGCCACAGCAGAAATCCGGAGGAG 960
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GAGGATATATGGACAAGACAATGTAGAAGAAGATCAACTGGCATCTGACCTCGATTTAAT 1020
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GAAAATTAGGGTCTCCCAGATGGAGAAAGACCGTCCAGTACCAGTAGATTTTTTCATTGC 1080
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TGAAGGAACTACTGTATTGGTCATAACTGGTCCAAACACAGGGGGCAAAACAATCAGCTT 1140
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GAAGACAGTTGGTCTGGCATCTTTAATGGCTAAAATAGGTTTATACATTCTAGCTTCTGA 1200
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      ACCAGTAAAAATTCCGTGGTTCAATGCTGTTTATGCTGACATTGGAGATGAGCAGTCTTT 1260
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GACACAATCACTCTCCACATTTTCTGGGCATCTAAAGCAGATCGGAGCCATTCGCGCATG 1320
consensus_11214#1      -------ACAATATCAACATCATCT-------TCAAGAGGCACAATATTATGT-TATGTG 45
                               ** * ** ****  ***       * ***  *  *      **       **

consensus_11214#0      GTCAACTTCACAATCCTTGGTTCTTTTGGATGAGGTTGGAGCTGGTACAAATCCACTTGA 1380
consensus_11214#1      AGAAATTCTCTA--CCTAGACTTGTGTACTTTACATTGAGAATGCTGCAATTCTCTTTC- 102
                          ** *    *  *** *  *  * *   * *  ***    ** * *** **   **  

consensus_11214#0      AGGAGCTGCTTTGGGGATGTCTCTTTTGGAATCTTTTGCTGAAGCTGGTTCCTTTCTGAC 1440
consensus_11214#1      -----CCAGCCAACACATTCTTGTTTGGATATAATGTGACATATACAAC-CTTTTGAGTT 156
                            *          **   * *** *  **  * **    *       * ***  *  

consensus_11214#0      TCTAGCAACAACTCATCA-TGGAGAACTTAAAACGTTAAAATATAGCAATGATTTGTTTG 1499
consensus_11214#1      TTCAATAGAAAAAGGTAAATAACTGATTTTAAGTTATGTTGTTCAATCATGGTTTGCATC 216
                       *  *  *  **    * * *     * ** **    *    *  *   *** ****  * 

consensus_11214#0      AGAACGCGTGCATGGAATTTGATGAAGATAATCTAAAGCCCACATTTCGGATTCTCTGGG 1559
consensus_11214#1      --TATATGTCGATCTGCCTTTCCGAGTGAACTTTTAGTTCCACCACATAGGATCTTAGAT 274
                          *   **  **     **   **    * * * *   ****      *  ***  *  

consensus_11214#0      GAATACCAGGACGTTCAAATGCAATCAATATTGCTGAAAGACTTGGTTTGCCCTCGGACA 1619
consensus_11214#1      TCTTTCTGATGTATTAGATTGTA-TGTGTGTTCATGTGACTATTAGATT-CTCTCTGATG 332
                          * *       **  * ** * *   * **  **  *   ** * ** * *** **  

consensus_11214#0      TAATAGAAAGCTCACGACAGTTACTTGGAACAGCTGGTGCAGAGATAAACGCGTTGATAA 1679
consensus_11214#1      TATTAGATTGTACATG--TGTTCATGTGACTATCATGTGTAACTGAATTAGCATCTGTCC 390
                       ** ****  *  ** *   ***  *  **  * *  *** *     *   ** *   *  

consensus_11214#0      TGGACATGGAAAATTTCAAACAACAATATCAACATCATCTTCAAGAGGCACAATATTATG 1739
consensus_11214#1      TGCTTAT---TAGGTCGAACTTTTCATATTAA--TTATGCATGTGTTCATTGACGT-GTA 444
                       **   **    *  *  **      **** **  * **      *       *  *  * 

consensus_11214#0      TTATGCAGTCCAAGGAGCTTCACAATAACTTGGAAGTGGCACAGAAGAACATTATAGACC 1799
consensus_11214#1      TCAGGCAGTCCAAGGAGCTTCACAATAACTTGGAAGTGGCACAGAAGAACATTATAGACC 504
                       * * ********************************************************

consensus_11214#0      ACACTTCTGCTCAAAGAAAAAGAAAGGCGAGAGTAATTTCAGAGTATGCTGTTATGGCTC 1859
consensus_11214#1      ACACTTCTGC-------------------------------------------------- 514
                       **********                                                  

consensus_11214#0      GTTCCATTATACGTAAGAAGTTTCAGCAGTTCCGCGAATCTGCAATAGCCAAAAGAGTGC 1919
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TTGAAGAAGAGAAAGCTGTGCAGAACGACAAACCTGAGAGATTGAAGGACCCTGAACCAA 1979
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      CGAGTACTCCTGCTGTCAAAAAGGCACAGAACACAAACATCAGCATGGCCACAACGACCG 2039
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      AAGGTGAAGATAATGGGATTCCGGAAGTTGGAGATTTATTATGTTCCTAAGCTCAAAAAC 2099
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GAAGCTACTGTTGTCAAAATAGACTCATCGAAGAACGAAGTGCAAGTCCAAGCTGGTATA 2159
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      ATGAAGCTCAAACTAAAATTCAAAGATGTCAAGATTCAGAAGAGGATCTCCAGATAAAAC 2219
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      GGCTGCGCTACCACCTGCATTGGCAGAGATAAGTATGTAAACCTTGTTTTTATACAGTTA 2279
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      CATTGCTTTTCTCTGCCGCATCTCCATTCTCACTGTATACATCTAGTCATTTATACACAG 2339
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      CCATGCAATTGTAGTAGATCTTCAGTTTTCATGCAGCATGTTTCCATCATGTTATAGAAG 2399
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      TTAGAACCCGTAGAATTCATCTGGAATTGAACTTGAAATTGTTTGAACGATCGTTCGAAG 2459
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      CAAATTCGCTAACAAATAAAGAATGTCCGGGAATTTTGCACTAAAAAAAAAAAAAAAAAG 2519
consensus_11214#1      ------------------------------------------------------------
                                                                                   

consensus_11214#0      AAAAAAAAAAAAAAAAAAA 2538
consensus_11214#1      -------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)