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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11216#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1746 fasta sequence
[CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTGTATTTT]
[+] EMBL AK101851 [CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTG AACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGAT ]
[+] EMBL CB667268 [ CAGCTCCCTCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAG ]
[-] EMBL CB618240 [ TCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTGCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATATGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAAGAGTGACAGGGGATGTTTGGGCGCACGCCGAATAttaaaagga ]
[-] EMBL CB667269 [ TAGCATGGGATGGTGAGGGTGCAACATGTTTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCACCCACTCCCATTTGACAGATTTGCGGCCAGCAAGTTTTTGAAAGATGCTGGAGACATCCATGGTCCAGTGACCATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTTTTACCCTGTTTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGTTAGGCATTTGAGCGATTTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTTTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTTTGCCATCCCATTTGATTCAATTTTAATTTATAACAGTGCCAGGGGATGTTTGGGCGCCCCCCGAATAAAGTTTGTATT ]
[+] EMBL CB096436 [ TAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGGGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTGTATTTT]
consensusID : consensus_11216#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1367 fasta sequence
[GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA]
[+] EMBL AK106253 [GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA]
consensusID : consensus_11216#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 812 fasta sequence
[TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA]
[+] EMBL CB618239 [TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA]
consensusID : consensus_11216#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 803 fasta sequence
[GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAGGAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGGAATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA]
[+] EMBL CA767223 [GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAGGAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGGAATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11216#0 CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGC 60
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 CACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCAC 120
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 GCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGAT 180
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 GGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCC 240
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 GTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTA 300
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 CGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGA 360
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 CGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTG 420
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 TAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGC 480
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 AAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGC 540
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 CAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCA 600
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 GAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTC 660
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAA 720
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 GAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA 780
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ------------------------------------------------------------
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 AGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGC 840
consensus_11216#3 ---------------------GAGGACGA-GACAAGGGG-GGTGTTTTAACAACTGACGC 37
consensus_11216#1 ----------------------------------------------------GCCCGCTC 8
consensus_11216#2 ----------------------------TTCCTCTTTCCCTCTATATTCCTCACCATCAC 32
* * *
consensus_11216#0 TCAAGTCAGCAGTGATGTTTGGA-GAGAAATGGTCCGAACA--TCAGTGAGTAGAAGCTT 897
consensus_11216#3 TCAAGTC-GCAGTGATGTTTGGA-GAGAAATGGTCCGAACA--TCAGTGAGTAGAAGCTT 93
consensus_11216#1 CCACGCT-GT-GTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCG 66
consensus_11216#2 AAAAGTT-ACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCG 91
* * ** * * * * * * ** * * **
consensus_11216#0 CAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAG 957
consensus_11216#3 CAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAG 153
consensus_11216#1 CCACCGCGCGTCAACTGCCGGCGATGC---CGCCCCCTTCCCTCCTGCTCCTCCATCCAC 123
consensus_11216#2 CCACCGCGCGTCAACTGCCGGCGATGC---CGCCCCCTTCCCTCCTGCTCCTCCATCCAC 148
* * * ** * ** *** * ** * * * * *** * *
consensus_11216#0 TGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTT-CC 1016
consensus_11216#3 TGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTT-CC 212
consensus_11216#1 GCACGCCGCTGCCGCA-CCACCACCGCTCCTCCTTCCGG-ACGAGCTCTCCGCGGCCATC 181
consensus_11216#2 GCACGCCGCTGCCGCA-CCACCACCGCTCCTCCTTCCGG-ACGAGCTCTCCGCGGCCATC 206
*** * *** * * * *** * * ** *** * * *
consensus_11216#0 AAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGG 1076
consensus_11216#3 AAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGG 272
consensus_11216#1 CAGGATGGTCTG-CGCCGCTGCCGAGGGGTTTAT---CTCCGCGGC----GCCGATCCTC 233
consensus_11216#2 CAGGATGGTCTG-CGCCGCTGCCGAGGGGTTTAT---CTCCGCGGC----GCCGATCCTC 258
** *** * * ** * * ** ** *** ** * * *
consensus_11216#0 GTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTA 1136
consensus_11216#3 GTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTA 332
consensus_11216#1 CTCCCCGACGGCCCGTGGAAGCAGGTGGAA--GGCGGCGTCACGGCGGCGAAGGGGTTCA 291
consensus_11216#2 CTCCCCGACGGCCCGTGGAAGCAGGTGGAA--GGCGGCGTCACGGCGGCGAAGGGGTTCA 316
* * * * * * ** * ** * ** * * * * *** * * *
consensus_11216#0 AAATTGCTCGT-TCAGTGGCA-TCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGA 1194
consensus_11216#3 AAATTGCTCGT-TCAGTGGCA-TCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGA 390
consensus_11216#1 AGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGG 351
consensus_11216#2 AGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGG 376
* ** ** ** *** *** * ** * ** ** * * * *
consensus_11216#0 CCCAAACTGGGGACGT-ATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGG 1253
consensus_11216#3 CCCAAACTGGGGACGT-ATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGG 449
consensus_11216#1 TC---GCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTG 408
consensus_11216#2 TC---GCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTG 433
* * * **** ** * * ** ** * * *** *** *
consensus_11216#0 ACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCAT 1313
consensus_11216#3 ACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCAT 509
consensus_11216#1 --CTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGT 466
consensus_11216#2 --CTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGT 491
* ** * *** ** * * * **** * ** * * *
consensus_11216#0 -TTGACAGATCTGCGGCCAGCAAGTATCTGAA-AGATGCTGGAGACATCCATGGTACAGT 1371
consensus_11216#3 -TTGACAGATCTGCGGCCAGCAAGTATCTGAA-AGATGCTGGAGACATCCATGGTACAGT 567
consensus_11216#1 GTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGT 526
consensus_11216#2 GTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGT 551
** * ** * * ***** * ** ** ** ** ** ** * ******
consensus_11216#0 GAACATTGATGTATCAGTTGGGAGGGGAG--GA-GGAAGTGG-AAAGGCCTGGGG-CTGT 1426
consensus_11216#3 GAACATTGATGTATCAGTTGGGAGGGGAG--GAAGGAAGTGGGAAAGGCCTGGGGGCTGT 625
consensus_11216#1 GGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCA 586
consensus_11216#2 GGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCA 611
* * * ** ** * **** * * * * ** ** * * * *
consensus_11216#0 GATTTAAGTTATAAGTATGTCGAGA-TAAATGC-GGAATACACGACGTG-AAAGTCTTAC 1483
consensus_11216#3 GATTTAAGNTATAAGTATGTCGAGA-TAAATGCCGGAATACACGACGGGGAAAGTCTTAC 684
consensus_11216#1 GTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAG 646
consensus_11216#2 GTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAG 671
* * * * * * **** **** * ** * * ** **
consensus_11216#0 ACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAG 1543
consensus_11216#3 ACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAG 744
consensus_11216#1 ACT-TGTG-GGCTCACTGTCTTCATCCATTGAGGGTGCAA-ATTCTGCAGCTGTGGCCAT 703
consensus_11216#2 ACT-TGTG-GGCTCACTGTCTTCATCCATTGAGGGTGCAA-ATTCTGCAGCTGTGGCCAT 728
*** * * * ** **** * ** ** ** * * * ** ** *
consensus_11216#0 -GCATCTGAGCGATCTGTATCATATTGAGACTCGCCC-TTTGTTGTATCAATCGGCTGAA 1601
consensus_11216#3 -GCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA 803
consensus_11216#1 TACAACT--ACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGA--GATTGGAGGAG 759
consensus_11216#2 TACAACT--ACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGA--GATTGGAGGAG 784
** ** * * * * * *** *** * * ** ** **
consensus_11216#0 CGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAG 1661
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 TGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAA 819
consensus_11216#2 TGCCTATCAAAATAGGAGGAATGGCCAA-------------------------------- 812
consensus_11216#0 CTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGC 1721
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 CAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGG 879
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 GCACGCCGAATAAAGTTTGTATTTT----------------------------------- 1746
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 TCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCA 939
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATG 999
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 ATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAA 1059
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 AATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTG 1119
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 CCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTA 1179
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 AAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTG 1239
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 TCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTT 1299
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 ------------------------------------------------------------
consensus_11216#3 ------------------------------------------------------------
consensus_11216#1 GGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTT 1359
consensus_11216#2 ------------------------------------------------------------
consensus_11216#0 --------
consensus_11216#3 --------
consensus_11216#1 GATGCGGA 1367
consensus_11216#2 --------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||