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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11220#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2266 fasta sequence
[TTTTTCCCAATAAATTTGCCCGAGTTTTCCTCTTTTGGTTCCCCAGTTTCAGTTTAAGCTCTTAAACCCTCGCCGGGAGATTTCGCCGCAAGATTCTCATTCTCCGCGCCTATTTGCTTGCCAGTTGTTGATCTTGGAGATGGCGGCAGCTCAGCAGGCGCAAGATTCAGCTGATCACATGGAGCCTCTAGAGTCACGCCTTGTGGTTGAGAAAAGTCCTTCTACAAGTATTCTCTCTAGTGAAGATCATAATTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCATGGGATATTCAAATTCTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACCTTCCTGATGGACTTCTGTATTCACCAACTCCTGGGTTCCACCAGCATTTCGGTTCCTTCGATGGAACTCAAATGCAACAAAGTGTTACTGGAATTTTTGGACAAGGGAACATACCATTGGCTTCTGGAATGCATCAGGGGTCCATGTACAGCTCTGGGTCATACAAGGCACGGCAGCAAGTCGGTAATTTTGGAGGTAGCACGCCAAATTGGAGTGCTGCCAGTCGCAGATTTAGCCCCTTTGACAGGGGCTTCAAGCATGATAAGGGCTCTCTTGAGTTTATGAGTGAGCAAAACCGTGGTCCACGGGCCACCAAACCCAAGAAAGAAGTGAATAACTCCTCAACTGAGGACAAAAATAGGAAAAGTGCATTAATAAATGATTCTAACTTGTACAACCAACATGATTTTGTTATTGAGTATGAGGATGCCAAATTTTTTGTAATAAAATCCTATACCGAAGATCATGTACACAAGAGCATAAAGTATGGTGTCTGGGCCAGCACTGCTAGTGGTAACAGAAAGTTGGATGCTGCTTATCGTGAAGCAAAAGAGAAAGAAGCCACTTGTCCTATTTTCTTGTTTTTCTCGGTTAATGGCAGCGGCCAGTTCTGTGGTGTGGCTGAGATGATTGGACCTGTGGACTTCGACAAGAGTGTTGATTACTGGCAGCAAGACAAGTGGAGCGGCCAGTTTCCTGTCAAATGGCACATTATCAAGGATGTCCCGAACAGCCTTCTTCGGCACATCATTCTCGAGAACAATGAAAACAAGCCTGTGACCAACAGCAGGGACACACAGGAGGTGAGACTGGACCACGGGCTCCAGATGCTAACAATCTTCAAGAACCATGAGGTCGAGACAACTATCCTCGAGGATTTCGACTTCTACGAGCAGCGGGAGAAAGCCATGCTGGATATCAGACAGCGACAGAAGCAGCAGCATACTGATTCCGAGGTCCAGAAGCCGATGGTGGAGGCCAAGGAACCAGTGGATCTTATGAACCAAATCTCAGCCACCTTTGCCCGGGCCGTGCAGCTTGGAGAAACCAAGGGCAGCAGGGAGGACAAACCAAAGGTTGAAGATGCTTCTGCTGCTGCTGTTGCTGTTCCTGAGAACGAGCCTGTTGCTCTTGCTGAGACTGAAGGATTGTTAGCAGATTCAGAGCCAAGCCCTTTGAAGGAAAGTGGTTGATCTTACCCCTTTCATGTCTGATTGCGAGAAGCAGCTGGGCCTTGTGATGTTCACATGGAAGCAAGAAGATCAAAGGAGGTTGATATGTGAAAAAAAAAATGCTGCTTCTTTTGTACTTCACCATAGGCTGCATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTAGGTTATGATGTTAGTCTTATGTTTCCTTCCCAATTTCTTCTTTCTGTTCTGTCATCTGTTCCACAAGCGCCACCAAGAATGGTGCTCAGTGGTTTAGCCATAAGGAAAGCTGCATATATAGGCCAGAGCTCTGTACAGTTTGCAGTTAAATTATGTTGTTCTCAATCTTTTCCTGTGATATCATACAATTCTGTAGCAAAGTTCTCCTGTTGAGATGACAGTTTTTTTCAGGGGGTAATTTCAGCTCC]
[+] EMBL AK065298 [TTTTTCCCAATAAATTTGCCCGAGTTTTCCTCTTTTGGTTCCCCAGTTTCAGTTTAAGCTCTTAAACCCTCGCCGGGAGATTTCGCCGCAAGATTCTCATTCTCCGCGCCTATTTGCTTGCCAGTTGTTGATCTTGGAGATGGCGGCAGCTCAGCAGGCGCAAGATTCAGCTGATCACATGGAGCCTCTAGAGTCACGCCTTGTGGTTGAGAAAAGTCCTTCTACAAGTATTCTCTCTAGTGAAGATCATAATTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCATGGGATATTCAAATTCTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACCTTCCTGATGGACTTCTGTATTCACCAACTCCTGGGTTCCACCAGCATTTCGGTTCCTTCGATGGAACTCAAATGCAACAAAGTGTTACTGGAATTTTTGGACAAGGGAACATACCATTGGCTTCTGGAATGCATCAGGGGTCCATGTACAGCTCTGGGTCATACAAGGCACGGCAGCAAGTCGGTAATTTTGGAGGTAGCACGCCAAATTGGAGTGCTGCCAGTCGCAGATTTAGCCCCTTTGACAGGGGCTTCAAGCATGATAAGGGCTCTCTTGAGTTTATGAGTGAGCAAAACCGTGGTCCACGGGCCACCAAACCCAAGAAAGAAGTGAATAACTCCTCAACTGAGGACAAAAATAGGAAAAGTGCATTAATAAATGATTCTAACTTGTACAACCAACATGATTTTGTTATTGAGTATGAGGATGCCAAATTTTTTGTAATAAAATCCTATACCGAAGATCATGTACACAAGAGCATAAAGTATGGTGTCTGGGCCAGCACTGCTAGTGGTAACAGAAAGTTGGATGCTGCTTATCGTGAAGCAAAAGAGAAAGAAGCCACTTGTCCTATTTTCTTGTTTTTCTCGGTTAATGGCAGCGGCCAGTTCTGTGGTGTGGCTGAGATGATTGGACCTGTGGACTTCGACAAGAGTGTTGATTACTGGCAGCAAGACAAGTGGAGCGGCCAGTTTCCTGTCAAATGGCACATTATCAAGGATGTCCCGAACAGCCTTCTTCGGCACATCATTCTCGAGAACAATGAAAACAAGCCTGTGACCAACAGCAGGGACACACAGGAGGTGAGACTGGACCACGGGCTCCAGATGCTAACAATCTTCAAGAACCATGAGGTCGAGACAACTATCCTCGAGGATTTCGACTTCTACGAGCAGCGGGAGAAAGCCATGCTGGATATCAGACAGCGACAGAAGCAGCAGCATACTGATTCCGAGGTCCAGAAGCCGATGGTGGAGTCCAAGGAACCAGTGGATCTTATGAACCAAATCTCAGCCACCTTTGCCCGGGCCGTGCAGCTTGGAGAAACCAAGGGCAGCAGGGAGGACAAACCAAAGGTTGAAGATGCTTCTGCTGCTGCTGTTGCTGTTCCTGAGAACGAGCCTGTTGCTCTTGCTGAGACTGAAGGATTGTTAGCAGATTCAGAGCCAAGCCCTTTGAAGGAAAGTGGTTGATCTTACCCCTTTCATGTCTGATTGCGAGAAGCAGCTGGGCCTTGTGATGTTCACATGGAAGCAAGAAGATCAAAGGAGGTTGATATGTGAAAAAAAAAATGCTGCTTCTTTTGTACTTCACCATAGGCTGCATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTAGGTTATGATGTTAGTCTTATGTTTCCTTCCCAATTTCTTCTTTCTGTTCTGTCATCTGTTCCACAAGCGCCACCAAGAATGGTGCTCAGTGGTTTAGCCATAAGGAAAGCTGCATATATAGGCCAGAGCTCTGTACAGTTTGCAGTTAAATTA ]
[+] EMBL OS0810A [ ATACAAGGCACGGCAGCAAGTCGGTAATTTTGGAGGTAGCACGCCAAATTGGAGTGCTGCCAGTCGCAGATTTAGCCCCTTTGACAGGGGCTTCAAGCATGATAAGGGCTCTCTTGAGTTTATGAATGAGCAAAACCGTGGTCCACGGGCCACCAAACCCAAGAAAGAAGTGAATAACTCCTCAACTGAGGACAAAAATAGGAAAAGTGCATTAATAAATGATTCTAACTTGTACAACCAACATGATTTTGTTATTGAGTATGAGGATGCCAAATTTTTTGTAATAAAATCCTATACCGAAGATCATGTACACAAGAGCATAAAGTATGGTGTCTGGGCCAGCACTGCTAGTGGTAACAGAAAGTTGGATGCTGCTTATCGTGAAGC AAAGAGGAAGAA ]
[+] EMBL AK062217 [ AAATCCTATACCGAAGATCATGTACACAAGAGCATAAAGTATGGTGTCTGGGCCAGCACTGCTAGTGGTAACAGAAAGTTGGATGCTGCTTATCGTGAAGCAAAAGAGAAAGAAGCCACTTGTCCTATTTTCTTGTTTTTCTCGGTTAATGGCAGCGGCCAGTTCTGTGGTGTGGCTGAGATGATTGGACCTGTGGACTTCGACAAGAGTGTTGATTACTGGCAGCAAGACAAGTGGAGCGGCCAGTTTCCTGTCAAATGGCACATTATCAAGGATGTCCCGAACAGCCTTCTTCGGCACATCATTCTCGAGAACAATGAAAACAAGCCTGTGACCAACAGCAGGGACACACAGGAGGTGAGACTGGACCACCGGCTCCAGATGCTAACAATCTTCAAGAACCATGAGGTCGAGACAACTATCCTCGAGGATTTCGACTTCTACGAGCAGCGGGAGAAAGCCATGCTGGATATCAGACAGCGACAGAAGCAGCAGCATACTGATTCCGAGGTCCAGAAGCCGATGGTGGAGGCCAAGGAACCAGTGGATCTTATGAACCAAATCTCAGCCACCTTTGCCCGGGCCGTGCAGCTTGGAGAAACCAAGGGCAGCAGGGAGGACAAACCAAAGGTTGAAGATGCTTCTGCTGCTGCTGTTGCTGTTCCTGAGAACGAGCCTGTTGCTCTTGCTGAGACTGAAGGATTGTTAGCAGATTCAGAGCCAAGCCCTTTGAAGGAAAGTGGTTGATCTTACCCCTTTCATGTCTGATTGCGAGAAGCAGCTGGGCCTTGTGATGTTCACATGGAAGCAAGAAGATCAAAGGAGGTTGATATGTGAAAAAAAAAATGCTGCTTCTTTTGTACTTCACCATAGGCTGCATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTAGGTTATGATGTTAGTCTTATGTTTCCTTCCCAATTTCTTCTTTCTGTTCTGTCATCTGTTCCACAAGCGCCACCAAGAATGGTGCTCAGTGGTTTAGCCATAAGGAAAGCTGCATATATAGGCCAGAGCTCTGTACAGTTTGCAGTTAAATTATGTTGTTCTCAATC ]
[-] EMBL CB630537 [ GAAAGCCATGCTGGATATCAGACAGCGACAGAAGCAGCAGCATACTGATTCCGAGGTCCAGAAGCCGATGGTGGAGGCCAAGGAACCAGTGGATCTTATGAACCAAATCTCAGCCACCTTTGCCCGGGCCGTGCAGCTTGGAGAAACCAAGGGCAGCAGGGAGGACAAACCAAAGGTTGAAGATGCTTCTGCTGCTGCTGTTGCTGTTCCTGAGAACGAGCCTGTTGCTCTTGCTGAGACTGAAGGATTGTTAGCAGATTCAGAGCCAAGCCCTTTGAAGGAAAGTGGTTGATCTTACCCCTTTCATGTCTGATTGCGAGAAGCAGCTGGGCCTTGTGATGTTCACATGGAAGCAAGAAGATCAAAGGAGGTTGATATGTGAAAAAAAAAATGCTGCTTCTTTTGTACTTCACCATAGGCTGCATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTAGGTTATGATGTTAGTCTTATGTTTCCTTCCCAATTTCTTCTTTCTGTTCTGTCATCTGTTCCACAAGCGCCACCAAGAATGGTGCTCAGTGGTTTAGCCATAAGGAAAGCTGCATATATAGGCCAGAGCTCTGTACAGTTTGCAGTTAAATTATGTTGTTGTCAATCTTTTCCTGTGATATCATACAATTCTGTAGCAAAGTTCTCCTGTTGAGATGACAGTTTTTTTCAGGGGGTAATTTCAGCTCC]
consensusID : consensus_11220#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 797 fasta sequence
[TCCTCTTTTGGTTCCCCAGTTTCAGTTTAAGCTCTTAAACCCTCGCCGGGAGATTTCGCCGCAAGATTCTCATTCTCCGCGCCTATTTGCTTGCCAGTTGTTGATCTTGGAGATGGCGGCAGCTCAGCAGGCGCAAGATTCAGCTGATCACATGGAGCCTCTAGAGTCACGCCTTGTGGTTGAGAAAAGTCCTTCTACAAGTGTGAGTGTGAAAAAGCAGATTCTCTCTAGTGAAGATCATAATTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCATGGGATATTCAAATTCTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACCTTCCTGATGGACTTCTGTATTCACCAACTCCTGGGTTCCACCAGCATTTCGGTTCCTTCGATGGAACTCAAATGCAACAAAGTGTTACTGGAATTTTTGGACAANGGAACATACCATTGGCTTCTGGAATGCATCAGGGGTCCATGTACAGCT]
[+] EMBL CB630536 [TCCTCTTTTGGTTCCCCAGTTTCAGTTTAAGCTCTTAAACCCTCGCCGGGAGATTTCGCCGCAAGATTCTCATTCTCCGCGCCTATTTGCTTGCCAGTTGTTGATCTTGGAGATGGCGGCAGCTCAGCAGGCGCAAGATTCAGCTGATCACATGGAGCCTCTAGAGTCACGCCTTGTGGTTGAGAAAAGTCCTTCTACAAGTGTGAGTGTGAAAAAGCAGATTCTCTCTAGTGAAGATCATAATTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCATGGGATATTCAAATTCTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACCTTCCTGATGGACTTCTGTATTCACCAACTCCTGGGTTCCACCAGCATTTCGGTTCCTTCGATGGAACTCAAATGCAACAAAGTGTTACTGGAATTTTTGGACAANGGAACATACCATTGGCTTCTGGAATGCATCAGGGGTCCATGTACAGCT]
[+] EMBL CB630583 [ CAATTGTGAATGTGAAAAAGAAGATTCTCTCTAGGGAACATCATAGTTTATCTAATACTGCTTTGCACAGCACAAATACCTTAAAATCCACCAAAAGTGCTCAACACAACGGAAGCTTTTTGGGTAAAAGCGGAGAACAACATTTCATCTACCACCCCAATGTGTATACCCCTCAGCCACTTACAGACTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCATGGGATATTCAAATTCTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACCTTCCTGATGGACTTCTGTAT ]
consensusID : consensus_11220#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[ATANTANTTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAATCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTACTTACTATCAGGCACCTGCTTCTCGTAGCATGGGATATTCAAATTTCTGCAACTGGGATGTCCGAGGTTGATGCTATGCAAGAGTATTACCTTCCTGATGCACTTCTGTATTCACGAACTCCTGGGATCCGACCACTATTTCAGGCTCGTGCGATGAAATTCAAATGCGACACAGCGTCACTGGCATCTTTGTACCAGGCGACATACCTCTGGCTTCTGGTATGACTTAGAGGGCACTGCACCCGTCTGGCACATACGAGGGACGGCGCGTAGCGGC]
[+] EMBL CA754292 [ATANTANTTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCCTGTGATGTACAGTTCTTATTCCCCTGTGCCAATCATGGGAGACAGCCAACCATATTACCCTTTGCACTGCCCTCTGTCAAGTACTTACTATCAGGCACCTGCTTCTCGTAGCATGGGATATTCAAATTTCTGCAACTGGGATGTCCGAGGTTGATGCTATGCAAGAGTATTACCTTCCTGATGCACTTCTGTATTCACGAACTCCTGGGATCCGACCACTATTTCAGGCTCGTGCGATGAAATTCAAATGCGACACAGCGTCACTGGCATCTTTGTACCAGGCGACATACCTCTGGCTTCTGGTATGACTTAGAGGGCACTGCACCCGTCTGGCACATACGAGGGACGGCGCGTAGCGGC]
consensusID : consensus_11220#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 261 fasta sequence
[AAAAATGCTGCTTCTTTTGTACTTCNCCATAGGCTGCATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTNGGTTATGATGTTAGTCTTATGTTTCCTTCCCAATTTCTTCTTTCTGTTCTGTCATNTGTTCCACAAGCGCCACCAAGAATGGTGCTCAGTGGTTTAGCCATAAGGAAAGCTGCATATATAGGCCAGAGCTCTGTACNGTTTGCNGTTAAATTATGTTGTTCTCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C98153 [AAAAATGCTGCTTCTTTTGTACTTCNCCATAGGCTGCATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTNGGTTATGATGTTAGTCTTATGTTTCCTTCCCAATTTCTTCTTTCTGTTCTGTCATNTGTTCCACAAGCGCCACCAAGAATGGTGCTCAGTGGTTTAGCCATAAGGAAAGCTGCATATATAGGCCAGAGCTCTGTACNGTTTGCNGTTAAATTATGTTGTTCTCAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11220#0 TTTTTCCCAATAAATTTGCCCGAGTTTTCCTCTTTTGGTTCCCCAGTTTCAGTTTAAGCT 60
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 CTTAAACCCTCGCCGGGAGATTTCGCCGCAAGATTCTCATTCTCCGCGCCTATTTGCTTG 120
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 CCAGTTGTTGATCTTGGAGATGGCGGCAGCTCAGCAGGCGCAAGATTCAGCTGATCACAT 180
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GGAGCCTCTAGAGTCACGCCTTGTGGTTGAGAAAAGTCCTTCTACAAGTATTCTCTCTAG 240
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGAAGATCATAATTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAACCAA 300
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 AAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCTACCA 360
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACCATCT 420
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTGATGCTGCATCTCC 480
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGTGATGTACAGTTCTTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATATTACCC 540
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCATGGGATA 600
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TTCAAATTCTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACCTTCCTGA 660
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGGACTTCTGTATTCACCAACTCCTGGGTTCCACCAGCATTTCGGTTCCTTCGATGGAAC 720
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TCAAATGCAACAAAGTGTTACTGGAATTTTTGGACAAGGGAACATACCATTGGCTTCTGG 780
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 AATGCATCAGGGGTCCATGTACAGCTCTGGGTCATACAAGGCACGGCAGCAAGTCGGTAA 840
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TTTTGGAGGTAGCACGCCAAATTGGAGTGCTGCCAGTCGCAGATTTAGCCCCTTTGACAG 900
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GGGCTTCAAGCATGATAAGGGCTCTCTTGAGTTTATGAGTGAGCAAAACCGTGGTCCACG 960
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GGCCACCAAACCCAAGAAAGAAGTGAATAACTCCTCAACTGAGGACAAAAATAGGAAAAG 1020
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGCATTAATAAATGATTCTAACTTGTACAACCAACATGATTTTGTTATTGAGTATGAGGA 1080
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGCCAAATTTTTTGTAATAAAATCCTATACCGAAGATCATGTACACAAGAGCATAAAGTA 1140
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGGTGTCTGGGCCAGCACTGCTAGTGGTAACAGAAAGTTGGATGCTGCTTATCGTGAAGC 1200
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 AAAAGAGAAAGAAGCCACTTGTCCTATTTTCTTGTTTTTCTCGGTTAATGGCAGCGGCCA 1260
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GTTCTGTGGTGTGGCTGAGATGATTGGACCTGTGGACTTCGACAAGAGTGTTGATTACTG 1320
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GCAGCAAGACAAGTGGAGCGGCCAGTTTCCTGTCAAATGGCACATTATCAAGGATGTCCC 1380
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GAACAGCCTTCTTCGGCACATCATTCTCGAGAACAATGAAAACAAGCCTGTGACCAACAG 1440
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 CAGGGACACACAGGAGGTGAGACTGGACCACGGGCTCCAGATGCTAACAATCTTCAAGAA 1500
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 CCATGAGGTCGAGACAACTATCCTCGAGGATTTCGACTTCTACGAGCAGCGGGAGAAAGC 1560
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 CATGCTGGATATCAGACAGCGACAGAAGCAGCAGCATACTGATTCCGAGGTCCAGAAGCC 1620
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GATGGTGGAGGCCAAGGAACCAGTGGATCTTATGAACCAAATCTCAGCCACCTTTGCCCG 1680
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 ------------------------------------------------------------
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GGCCGTGCAGCTTGGAGAAACCAAGGGCAGCAGGGAGGACAAACCAAAGGTTGAAGATGC 1740
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 -------------TCCTCTTTTGGTTCCCCAGTTTCAGTTTAAGCTCTTAAACCCTCGCC 47
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TTCTGCTGCTGCTGTTGCTGTTCCTGAGAACGAGCCTGTTGCTCTTGCTGAGACTGAAGG 1800
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 GGGAGATTTCGCCGCAAGATTCTCATTCTCCGCGCCTATTTGCTTGCCAGTTGTTGATCT 107
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 ATTGTTAGCAGATTCAGAGCCAAGCCCTTTGAAGGAAAGTGGTTGATCTTACCCCTTTCA 1860
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 TGGAGATGGCGGCAGCTCAGCAGGCGCAAGATTCAGCTGATCACATGGAGCCTCTAGAGT 167
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 TGTCTGATTGCGAGAAGCAGCTGGGCCTTGTGATGTTCACATGGAAGCAAGAAGATCAAA 1920
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 CACGCCTTGTGGTTGAGAAAAGTCCTTCTACAAGTGTGAGTGTGAAAAAGCAGATTCTCT 227
consensus_11220#2 ------------------------------------------------------------
consensus_11220#0 GGAGGTTGATATGTGAAAAAAAAAATGCTGCTTCTTTTGT----ACTTCACCATAGGCTG 1976
consensus_11220#3 --------------------AAAAATGCTGCTTCTTTTGT----ACTTCNCCATAGGCTG 36
consensus_11220#1 CTAGTGAAGATCATAATTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAA 287
consensus_11220#2 ---------ATANTANTTTATCTAGTACTGCTTTGCACGGCGCAAGTTCCTTAAAATCAA 51
* * ****** * * *** * * *
consensus_11220#0 CATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTAGGTTATGATGTT------ 2030
consensus_11220#3 CATTATAGGCTGGAGGAGAAGGATTTGGTTCACCTCCAGTTNGGTTATGATGTT------ 90
consensus_11220#1 CCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCT 347
consensus_11220#2 CCAAAAGTGCTCAAGAGAAGGGAAGCTTTTTGGGTAAAGGTGGAGAACAACATTTCATCT 111
* * *** ** * *** ** * ** * * * * **
consensus_11220#0 ---AGTCT--TATGTTTCCTTCCCAATTTCTT-CTTTCTGTTCTGT----CATCTGTTCC 2080
consensus_11220#3 ---AGTCT--TATGTTTCCTTCCCAATTTCTT-CTTTCTGTTCTGT----CATNTGTTCC 140
consensus_11220#1 ACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACC 407
consensus_11220#2 ACCAGCCCAATGTGTATACCCCTCAGCCACATACAGTCTTTTCTGGAGGATACTTGAACC 171
** * * *** * * * ** * * * *** ***** * ** **
consensus_11220#0 ACAAGCGCCACCAAGAATGGTGCTCA-GTGGTTTAGCCATAAGGAAAGCTGCATATATAG 2139
consensus_11220#3 ACAAGCGCCACCAAGAATGGTGCTCA-GTGGTTTAGCCATAAGGAAAGCTGCATATATAG 199
consensus_11220#1 ATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTG-ATGCTGCA 466
consensus_11220#2 ATCTGGGTCAATGGGAAGAATATCCGCATGTTGCCAGTGCAGATGGAACTG-ATGCTGCA 230
* * * ** *** * * ** * * * *** **
consensus_11220#0 GCCAGAGCTCTGTACAGTTTGCAGTTAAATTATGTTGTTCTCAATCTTTTCCTGTGATAT 2199
consensus_11220#3 GCCAGAGCTCTGTACNGTTTGCNGTTAAATTATGTTGTTCTCAAAAAAAAAAAAAAAAAA 259
consensus_11220#1 TCTCCTGTGATGTACAGTTC-TTATTCCCCTGTGCCAACCATGGGAGACAGCCAACCATA 525
consensus_11220#2 TCTCCTGTGATGTACAGTTC-TTATTCCCCTGTGCCAATCATGGGAGACAGCCAACCATA 289
* * ***** *** ** * ** *
consensus_11220#0 CATACAATTCTGTAGCAAAGTTCTCCTGTTGAGATGACAGTTTTTTTCAGGGGGTAATTT 2259
consensus_11220#3 AA---------------------------------------------------------- 261
consensus_11220#1 TTACCCTTTGCACTGCCCTCTGTCAAGTCCTTACTATCAGCCACCTGCTTCTCCTAGCAT 585
consensus_11220#2 TTACCCTTTGCACTGCCCTCTGTCAAGTACTTACTATCAGGCACCTGCTTCTCGTAGCAT 349
consensus_11220#0 CAGCTCC----------------------------------------------------- 2266
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 GGGATATTCAAATT-CTGCAACTGGGATGTCGCAGTTTGATCCTATGCAAGAGTATTACC 644
consensus_11220#2 GGGATATTCAAATTTCTGCAACTGGGATGTCCGAGGTTGATGCTATGCAAGAGTATTACC 409
consensus_11220#0 ------------------------------------------------------------
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 TTCCTGATGGACTTCTGTATTCACCAACTCCTGGGTTCC-ACCAGCATTTC-GGTTCCTT 702
consensus_11220#2 TTCCTGATGCACTTCTGTATTCACGAACTCCTGGGATCCGACCACTATTTCAGGCTCGTG 469
consensus_11220#0 ------------------------------------------------------------
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 CGATGGAACTCAAATGCAACAAAGTGTTACTGGAATTTTTGGACAANGGAACATACCATT 762
consensus_11220#2 CGATGAAATTCAAATGCGACACAGCGTCACTGGCATCTTTGTACCAGGCGACATACCTCT 529
consensus_11220#0 ------------------------------------------------------------
consensus_11220#3 ------------------------------------------------------------
consensus_11220#1 GGCTTCTGGAATGCATCAGGGGTCCATGTACAGCT------------------------- 797
consensus_11220#2 GGCTTCTGGTATGACTTAGAGGGCACTGCACCCGTCTGGCACATACGAGGGACGGCGCGT 589
consensus_11220#0 ------
consensus_11220#3 ------
consensus_11220#1 ------
consensus_11220#2 AGCGGC 595
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||