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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11228#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 4022 fasta sequence
[CTTTAGAGTTTTCTTTTAAAGTTATTTATCCGATTTAATTCTTACGAACACAACCGTGGAATTGGATCGTAAATCGGATGAGTAGTGTAAGAGAATTTTATTTGAAACATAGGTGATACCAATATATTTTCTATTTACATGTTGATATCTAGATAGGGTCTCTCGTTAGCACTAAAACGAGAGGCCTCGTGATTTAGATTTTGCCATCTATCTATCTATTATATTATTAAAACAGCTTTGAAAGGAGGCACTATGTTCGCGGTGGGGGCTAGAAATTCCCACATTATTCTCATAAAAAGAAAAAGAGTGTCCAAATAGAAATACAGTTTAAAAATATCTGAAATTCGGAATTAAAAATAAGCAATATGGAAAGAAGAGTCCGTATAAGAACCTAATACGAGATTAATCAAAATCTAGAATAAAAATAAAATAAAATCTGAAATTAGAAAAGAAAAGGAGAGTCCAAGTAGGAATACAATTTTAAATAACTGAATTTCGGAATTAAAAATAAGGAATGTTGAGAGAAGAATCCGTATAAGAACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCAAAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAA-TAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATCCTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATTGCCGAGACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTCAGAACTTCTAAAAAGTAAAAAAAAAAACTAATGATGATCATGTTCAATTTTAAAATCTCAATGACAATAAAAAAGGGAGACAACAGGCGAGCCATAAAGAAGTACAATGACAAAGCCGCTGACGGTTTGGTGGGACTTTTAGAAAGTAAAAAATGAACTTGAATGATAGTTATGTTCGATTTTTAAAATCCCAATGATAATAAAGAAAAAAGACAGTGGACGGGCCGTAGAGAAGTATAATGGCAGCGTTTGGCGGGACTTCTGGAAATTATAAAAACGAAACCCAGTGAGACAATAACCTCTAAAAACTAAGATCCAATTTTTAAAGGTTTCAAAGAGAATGAATAAAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAGGATATGATAGAAGTAAGGGGTAGCAGCTAGGGCGACTTTTAAAAATTATATAATTAGAAATACGGGGATGATAATGTTTGGTCTTTCAGCTATTTAATAAATTTTAAATAAAATCATACTGAAAAATATTGTTTGTTTGCTAGCCGCGCAATTGCGCGGGCCACCCAGCTAGTTCATATAGATGTTAATGAATCTAAACATGTGTGTGTCTAGATTTTTTAACATCTATATAAAGATGAGTCATCTACCCTATAATTCACCAACTCATCTTACTCATATCTCATCCTTACACTCTTACACCTTACATATCCAACGGCTCATATCTACCTGCTCTATAATCCAACGGTCCAGATCGTGTGCAGCTTACTCCCTTCTCCCTCCGCGCTCCTCCCCACGTCCACGCGGCTCCTTCTCGCGATTGCCCCGTCAATCTCGTGATTCCCGTGAATCGCCCCAATCTCGCCCCCTTCATCGGCTCTAGCCGTGTCTCCCATCGCCCCGCGCCGCCGCCTCACCATCGTCGTCGCTCCCTTCCCTCTCCAACGCCGCCGTCGCCTATCACGCCCGACCCCCTCCATCGCTTCCCCAAACCGTGTCCCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCCGCCGACGCTGATCTGCTCCACCACCCACTCCCCGCTGCACGCGACCAGTTCGCCGTCACGCGCCGTGACCCGTGCTCCCACACCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCTGCCGACGCCGATCTGCCCCGCCACCCACTCCCCGCTCCCCACTGCACGCGGCCAGTTCGCCGTCGTGCGGCTAGACCCGTTCTCCCACACCTCCCCGCCACCGGAAGCCCTCCGTCGCCACGTCGCCGCCGACGCCGATCTGCTCCGCCACCCACTCCCCGCTGCACGCGGCCAGTTCGCCGTCATGCTTCGCCGTCACGCACCGTGACCCGTGGTCCCACCGGTTAGTTTATGCCTAGCGCTAACACAATGCCAATTGCTGTCGTTCAGTACGTGCAATGCTCAGTATATACAATGTTTCCGCCAATATCAGGTTATGGAATGGGGTGAACTAATACATCCGGATTGGTGAGATCAGGGTGATTGGGCTTTTTTTTTCAGTTTTTTCTCATGATGAAAATTTTGGGATGTTTCTCATTTAAGTGGGATGGTAATGTTGAACTATAAATCTGGTGTGTAGCATTGCTACTGTGGCAGCAGTTTGCTGCTTACTGGCTGAATAAACTCATAAAATTGTTTGCCTATGTGCTCAATGATGTACAGTTGACACCATCCTCCCCAGCTCCCCGCCGTCACCACGCATCCCACCGCGTCGCCCCCAGTCTCCGCATCGTCAACTGCCTCCGCTCCTATGTGAGTCATCAATCGCCTCCACTCCACCTCGTCAACCACCTCCGCGCGTCCACTTGTCTTGGCCTCTTCAACAACGTCTCCCGCCTCGACCTGATTCACCGGAAGATCCATCGCCGTCATCTGGCAGGAGCAGAAGCGACCAATTCATCTTGGCATATTTCTTAAGATCACCGACACCAGCCGCGCCGTGATTCCGACACCGGGACTCCTTGCCCCTGCGACAGCTTCTCTACCGCAACACCGTCAAGTGATATCTTTTGCACCCTGACCGGAAACCTCTCTACTGCGTTGCGAACAGGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCCCTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTAATCCTCAGCAAGTGATCCTTTGCCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGTACTAAAATATTGGGCATAATGAGAATATGGCTTGNTGAGCTTTATGGGATTATGGTCTTTGATTGAGTGCTTTCTATAGGTCGTACTATTAATATGTCCTACTGCATGTTTTACAAGTTGTGCTACCTATTTATTTATTTTCTAAAAGGACCAACAGGTGCTATACTCATTCAACATGTTTATGAGCTGTCATTATTGATGTTAGTAAAACTTGGATTGGCAGTTTTCATGGTTTCAAATTAGNACCTACAGTCTTCATTTTACAGTATAGACCAAATGAAGCGGCAACATTTTTTAGTAATGTATTAAGATGGTTACCATCAA]
[+] EMBL CB667984 [CTTTAGAGTTTTCTTTTAAAGTTATTTATCCGATTTAATTCTTACGAACACAACCGTGGAATTGGATCGTAAATCGGATGAGTAGTGTAAGAGAATTTTATTTGAAACATAGGTGATACCAATATATTTTCTATTTACATGTTGATATCTAGATAGGGTCTCTCGTTAGCACTAAAACGAGAGGCCTCGTGATTTAGATTTTGCCATCTATCTATCTATTATATTATTAAAACAGCTTTGAAAGGAGGCACTATGTTCGCGGTGGGGGCTAGAAATTCCCACATTATTCTCATAAAAAGAAAAAGAGTGTCCAAATAGAAATACAGTTTAAAAATATCTGAAATTCGGAATTAAAAATAAGCAATATGGAAAGAAGAGTCCGTATAAGAACCTAATACGAGATTAATCAAAATCTAGAATAAAAATAAAATAAAATCTGAAATTAGAAAAGAAAAGGAGAGTCCAAGTAGGAATACAATTTTAAATAACTGAATTTCGGAATTAAAAATAAGGAATGTTGAGAGAAGAATCCGTATAAGAACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCAAAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAATTAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCCGAATAAAAAATAAAATAATATCC ]
[+] EMBL CB638044 [ AAATAAGGAATGTTGAGAGAAGAATCCGTATAAGAACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCAAAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAATTAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATC ]
[-] EMBL CB658260 [ TTTGAAA TAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATCCTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATTGCCGAGACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTC ]
[-] EMBL CB658190 [ t TAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATCCTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATTGCCGAGACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTC ]
[-] EMBL CB667985 [ ATAAATTCTGAAATTATAAAAAGAAAAAAGATTCTAATTAGGAATACAATTTATAAATAACTAAAATTGGCCATACAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACCTATCGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATCAAACATCAAATAGAATCCTAATGACGATTCAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAACGCGATTGCCCATACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATCACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCCCCGACGGCTAGCGGGTCCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTGGACTTGTAGAATCCCAATGACAATAAAGAGTAGG ]
[+] EMBL AK106928 [ CCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTCAGAACTTCTAAAAAGTAAAAAAAAAAACTAATGATGATCATGTTCAATTTTAAAATCTCAATGACAATAAAAAAGGGAGACAACAGGCGAGCCATAAAGAAGTACAATGACAAAGCCGCTGACGGTTTGGTGGGACTTTTAGAAAGTAAAAAATGAACTTGAATGATAGTTATGTTCGATTTTTAAAATCCCAATGATAATAAAGAAAAAAGACAGTGGACGGGCCGTAGAGAAGTATAATGGCAGCGTTTGGCGGGACTTCTGGAAATTATAAAAACGAAACCCAGTGAGACAATAACCTCTAAAAACTAAGATCCAATTTTTAAAGGTTTCAAAGAGAATGAATAAAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAGGATATGATAGAAGTAAGGGGTAGCAGCTAGGGCGACTTTTAAAAATTATATAATTAGAAATACGGGGATGATAATGTTTGGTCTTTCAGCTATTTAATAAATTTTAAATAAAATCATACTGAAAAATATTGTTTGTTTGCTAGCCGCGCAATTGCGCGGGCCACCCAGCTAGTTCATATAGATGTTAATGAATCTAAACATGTGTGTGTCTAGATTTTTTAACATCTATATAAAGATGAGTCATCTACCCTATAATTCACCAACTCATCTTACTCATATCTCATCCTTACACTCTTACACCTTACATATCCAACGGCTCATATCTACCTGCTCTATAATCCAACGGTCCAGATCGTGTGCAGCTTACTCCCTTCTCCCTCCGCGCTCCTCCCCACGTCCACGCGGCTCCTTCTCGCGATTGCCCCGTCAATCTCGTGATTCCCGTGAATCGCCCCAATCTCGCCCCCTTCATCGGCTCTAGCCGTGTCTCCCATCGCCCCGCGCCGCCGCCTCACCATCGTCGTCGCTCCCTTCCCTCTCCAACGCCGCCGTCGCCTATCACGCCCGACCCCCTCCATCGCTTCCCCAAACCGTGTCCCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCCGCCGACGCTGATCTGCTCCACCACCCACTCCCCGCTGCACGCGACCAGTTCGCCGTCACGCGCCGTGACCCGTGCTCCCACACCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCTGCCGACGCCGATCTGCCCCGCCACCCACTCCCCGCTCCCCACTGCACGCGGCCAGTTCGCCGTCGTGCGGCTAGACCCGTTCTCCCACACCTCCCCGCCACCGGAAGCCCTCCGTCGCCACGTCGCCGCCGACGCCGATCTGCTCCGCCACCCACTCCCCGCTGCACGCGGCCAGTTCGCCGTCATGCTTCGCCGTCACGCACCGTGACCCGTGGTCCCACCGGTTAGTTTATGCCTAGCGCTAACACAATGCCAATTGCTGTCGTTCAGTACGTGCAATGCTCAGTATATACAATGTTTCCGCCAATATCAGGTTATGGAATGGGGTGAACTAATACATCCGGATTGGTGAGATCAGGGTGATTGGGCTTTTTTTTTCAGTTTTTTCTCATGATGAAAATTTTGGGATGTTTCTCATTTAAGTGGGATGGTAATGTTGAACTATAAATCTGGTGTGTAGCATTGCTACTGTGGCAGCAGTTTGCTGCTTACTGGCTGAATAAACTCATAAAATTGTTTGCCTATGTGCTCAATGATGTACAGTTGACACCATCCTCCCCAGCTCCCCGCCGTCACCACGCATCCCACCGCGTCGCCCCCAGTCTCCGCATCGTCAACTGCCTCCGCTCCTATGTGAGTCATCAATCGCCTCCACTCCACCTCGTCAACCACCTCCGCGCGTCCACTTGTCTTGGCCTCTTCAACAACGTCTCCCGCCTCGACCTGATTCACCGGAAGATCCATCGCCGTCATCTGGCAGGAGCAGAAGCGACCAATTCATCTTGGCATATTTCTTAAGATCACCGACACCAGCCGCGCCGTGATTCCGACACCGGGACTCCTTGCCCCTGCGACAGCTTCTCTACCGCAACACCGTCAAGTGATATCTTTTGCACCCTGACCGGAAACCTCTCTACTGCGTTGCGAACAGGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCCCTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTAATCCTCAGCAAGTGATCCTTTGCCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGTACTAAAATATTGGGCATAATGAGAATATGGCTT ]
[+] EMBL CA764916 [ ggggTACTGNGTTGCGAACAAGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCCCTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTTATCCTCAGCAAGTGATCCTTTGTCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGTACTAAAATATTGGGCATAATGAGAATATGGCTTGNTGAGCTTTATGGGATTATGGTCTTTGATTGAGTGCTTTCTATAGGTCGTACTATTAATATGTCCTACTGCATGTTTTACAAGTTGTGCTACCTATTTATTTATTTTCTAAAAGGACCAACAGGTGCTATACTCATTCAACATGTTTATGAGCTGTCATTATTGATGTTAGTAAAACTTGGATTGGCAGTTTTCATGGTTTCAAATTAGNACCTACAGTCTTCATTTTACAGTATAGACCAAATGAAGCGGCAACATTTTTTAGTAATGTATTAAGATGGTTACCATCAA]
consensusID : consensus_11228#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 838 fasta sequence
[TAGGAATACAATTTTGAAAAAAATAAAATTCAAAATGAAAAATAAAAACATTAAAAGAACACAATACAATATTAACTAATTTTTTAGAAAAAATAAATTCTGAAATTAGAAAAAAAGATTTATATTAGGAATAAAATTTATAAATAACTAAAATTTATGATAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATGACGAGATAAATTAAGTAACATGCCTATAAAGTAGTAGAGTTGGTGGTGGTTAATACGGCATATAAAAATTATTAATAAAACACCAAATAGAATCCTAATGACGATTAAAAGGAGGGACATCAGGCATGCCGTGAAGTAAACAAGTAAAGCGGTTGCCGGGACTTCTAGAAAGTATAAAGAAAAAAAACCACATTGATAATCATTCTCGATTTTTAAAATCTCAATGACAATAAAAAGGAGAAGCAACGAGTGGGGTGTATAAGAGTATAGTTGCAGAGCCTCCGACAGTTGACGGGACTTCTAGAAAATAAAAAATGAATTGTAACGATAGTTATGTTCGATTTTTAGAATCACAATAACAATAAAGAGTAGGCGGCGGACGGGCTGCAGAGGGGCATAGTGGCATCGTTTGATGAGACTTCTAAAAATTATAAAAAATAAAACTACAAGTCCAATTTTTAAAGATTTAGAAATTCTAAAAAGTAAAAAAAAAACCAATGATAATCATGTTCTATTTTAAATCTCAATGACAATAAATAAGGGAGGCAGCGAGCGAGCCGTAGAGGAGTACAATGGCAAAACCGCTGATGGTTTGGCGGGACTTAGAATCCAGGGCACCACTACCTCAAGCTAC]
[-] EMBL CB635109 [TAGGAATACAATTTTGAAAAAAATAAAATTCAAAATGAAAAATAAAAACATTAAAAGAACACAATACAATATTAACTAATTTTTTAGAAAAAATAAATTCTGAAATTAGAAAAAAAGATTTATATTAGGAATAAAATTTATAAATAACTAAAATTTATGATAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATGACGAGATAAATTAAGTAACATGCCTATAAAGTAGTAGAGTTGGTGGTGGTTAATACGGCATATAAAAATTATTAATAAAACACCAAATAGAATCCTAATGACGATTAAAAGGAGGGACATCAGGCATGCCGTGAAGTAAACAAGTAAAGCGGTTGCCGGGACTTCTAGAAAGTATAAAGAAAAAAAACCACATTGATAATCATTCTCGATTTTTAAAATCTCAATGACAATAAAAAGGAGAAGCAACGAGTGGGGTGTATAAGAGTATAGTTGCAGAGCCTCCGACAGTTGACGGGACTTCTAGAAAATAAAAAATGAATTGTAACGATAGTTATGTTCGATTTTTAGAATCACAATAACAATAAAGAGTAGGCGGCGGACGGGCTGCAGAGGGGCATAGTGGCATCGTTTGATGAGACTTCTAAAAATTATAAAAAATAAAACTACAAGTCCAATTTTTAAAGATTTAGAAATTCTAAAAAGTAAAAAAAAAACCAATGATAATCATGTTCTATTTTAAATCTCAATGACAATAAATAAGGGAGGCAGCGAGCGAGCCGTAGAGGAGTACAATGGCAAAACCGCTGATGGTTTGGCGGGACTTAGAATCCAGGGCACCACTACCTCAAGCTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11228#0 CTTTAGAGTTTTCTTTTAAAGTTATTTATCCGATTTAATTCTTACGAACACAACCGTGGA 60
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 ATTGGATCGTAAATCGGATGAGTAGTGTAAGAGAATTTTATTTGAAACATAGGTGATACC 120
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AATATATTTTCTATTTACATGTTGATATCTAGATAGGGTCTCTCGTTAGCACTAAAACGA 180
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GAGGCCTCGTGATTTAGATTTTGCCATCTATCTATCTATTATATTATTAAAACAGCTTTG 240
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AAAGGAGGCACTATGTTCGCGGTGGGGGCTAGAAATTCCCACATTATTCTCATAAAAAGA 300
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AAAAGAGTGTCCAAATAGAAATACAGTTTAAAAATATCTGAAATTCGGAATTAAAAATAA 360
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GCAATATGGAAAGAAGAGTCCGTATAAGAACCTAATACGAGATTAATCAAAATCTAGAAT 420
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AAAAATAAAATAAAATCTGAAATTAGAAAAGAAAAGGAGAGTCCAAGTAGGAATACAATT 480
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TTAAATAACTGAATTTCGGAATTAAAAATAAGGAATGTTGAGAGAAGAATCCGTATAAGA 540
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 ACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCA 600
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAATAAA 660
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTC 720
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAA 780
consensus_11228#1 ------------------------------------------------------TAGGAA 6
******
consensus_11228#0 TACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAG 840
consensus_11228#1 TACAATTTTGAAAAAAATAAAATTCAAAATGAAAAAT--AAAAACATTAAAAGAACACAA 64
************* * * ********** ****** ***** ********** * *
consensus_11228#0 --------------ATTTTT---AAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGAT 883
consensus_11228#1 TACAATATTAACTAATTTTTTAGAAAAAATAAATTCTGAAATTAGAAAAA-----AAGAT 119
****** ** ****************** ***** *****
consensus_11228#0 TTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTG 943
consensus_11228#1 TTATATTAGGAATAAAATTTATAAATAACTAAAATTTATGATAAAAA-TAAAGACTATTG 178
** ********** ********************* ********* ************
consensus_11228#0 AAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAA 1003
consensus_11228#1 AAAGAAAAGACCATCTAAAACACATGACGAGATAAATTAAGTAACATGCCTATAAAGTAG 238
************************* ******************************* *
consensus_11228#0 TAGAGT-GGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATC 1062
consensus_11228#1 TAGAGTTGGTGGTGGTTAATACGGCATATAAAAATTATTAATAAAACACCAAATAGAATC 298
****** *** * **** **** ************ *********** ***********
consensus_11228#0 CTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATT 1122
consensus_11228#1 CTAATGACGATTAAAAGGAGGGACATCAGGCATGCCGTGAAGTAAACAAGTAAAGCGGTT 358
*********************** ****** ************** ** ** *** **
consensus_11228#0 GCCGAGACTTCTAGAAAGTA---AAAAAATAAACCCCATTTATAATCATATTTGATTTTT 1179
consensus_11228#1 GCCGGGACTTCTAGAAAGTATAAAGAAAAAAAACCACATTGATAATCATTCTCGATTTTT 418
**** *************** * **** ***** **** ******** * *******
consensus_11228#0 AAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGT 1239
consensus_11228#1 AAAATCTCAATGACAATAAAAAGGAGAAGCAACGAGTGGGGTGTATAAGAGTATAGTTGC 478
*********** ******************* ** * **********************
consensus_11228#0 AGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTA 1299
consensus_11228#1 AGAGCCTCCGACAGTTGACGGGACTTCTAGAAAATAAAAAATGAATTGTAACGATAGTTA 538
****** ***** *** ****** ***************** **** **********
consensus_11228#0 TGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGA 1359
consensus_11228#1 TGTTCGATTTTTAGAATCACAATAACAATAAAGAGTAGGCGGCGGACGGGCTGCAGAGGG 598
********** ******* **** *************** **** * **** * *****
consensus_11228#0 GTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGAC 1419
consensus_11228#1 GCATAGTGGCATCGTTTGATGAGACTTCTAAAAATTATAAAAAATAAAACT--ACAAGTC 656
* *** ** ********** * *********** *** ******* **** ***** *
consensus_11228#0 AATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTCAGAACTTCTAAAAAGTAAAAAAA 1479
consensus_11228#1 --CAATTTTTAAAGA-------------------TTTAGAAATTCTAAAAAGTAAAAAAA 695
** * **** * ** **** ******************
consensus_11228#0 AAAACTAATGATGATCATGTTCAATTTTAAAATCTCAATGACAATAAAAAAGGGAGACAA 1539
consensus_11228#1 AAA-CCAATGATAATCATGTTCTATTTTAAA-TCTCAATGACAATAAATAAGGGAGGCAG 753
*** * ****** ********* ******** **************** ******* **
consensus_11228#0 CAGGCGAGCCATAAAGAAGTACAATGACAAAGCCGCTGACGGTTTGGTGGGACTTTTAGA 1599
consensus_11228#1 CGAGCGAGCCGTAGAGGAGTACAATGGCAAAACCGCTGATGGTTTGGCGGGACTTAGAAT 813
* ******* ** ** ********* **** ******* ******* ******* *
consensus_11228#0 A-AGTAAAAAATGAACTTGAATGATAGTTATGTTCGATTTTTAAAATCCCAATGATAATA 1658
consensus_11228#1 CCAGGGCACCACTACCTCAAGCTAC----------------------------------- 838
** * * * ** * *
consensus_11228#0 AAGAAAAAAGACAGTGGACGGGCCGTAGAGAAGTATAATGGCAGCGTTTGGCGGGACTTC 1718
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TGGAAATTATAAAAACGAAACCCAGTGAGACAATAACCTCTAAAAACTAAGATCCAATTT 1778
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TTAAAGGTTTCAAAGAGAATGAATAAAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAG 1838
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GATATGATAGAAGTAAGGGGTAGCAGCTAGGGCGACTTTTAAAAATTATATAATTAGAAA 1898
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TACGGGGATGATAATGTTTGGTCTTTCAGCTATTTAATAAATTTTAAATAAAATCATACT 1958
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GAAAAATATTGTTTGTTTGCTAGCCGCGCAATTGCGCGGGCCACCCAGCTAGTTCATATA 2018
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GATGTTAATGAATCTAAACATGTGTGTGTCTAGATTTTTTAACATCTATATAAAGATGAG 2078
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TCATCTACCCTATAATTCACCAACTCATCTTACTCATATCTCATCCTTACACTCTTACAC 2138
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CTTACATATCCAACGGCTCATATCTACCTGCTCTATAATCCAACGGTCCAGATCGTGTGC 2198
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AGCTTACTCCCTTCTCCCTCCGCGCTCCTCCCCACGTCCACGCGGCTCCTTCTCGCGATT 2258
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GCCCCGTCAATCTCGTGATTCCCGTGAATCGCCCCAATCTCGCCCCCTTCATCGGCTCTA 2318
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GCCGTGTCTCCCATCGCCCCGCGCCGCCGCCTCACCATCGTCGTCGCTCCCTTCCCTCTC 2378
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CAACGCCGCCGTCGCCTATCACGCCCGACCCCCTCCATCGCTTCCCCAAACCGTGTCCCT 2438
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCCGCCGACGCTGATCTGCTCCACCACC 2498
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CACTCCCCGCTGCACGCGACCAGTTCGCCGTCACGCGCCGTGACCCGTGCTCCCACACCT 2558
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCTGCCGACGCCGATCTGCCCCGCCACC 2618
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CACTCCCCGCTCCCCACTGCACGCGGCCAGTTCGCCGTCGTGCGGCTAGACCCGTTCTCC 2678
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CACACCTCCCCGCCACCGGAAGCCCTCCGTCGCCACGTCGCCGCCGACGCCGATCTGCTC 2738
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CGCCACCCACTCCCCGCTGCACGCGGCCAGTTCGCCGTCATGCTTCGCCGTCACGCACCG 2798
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TGACCCGTGGTCCCACCGGTTAGTTTATGCCTAGCGCTAACACAATGCCAATTGCTGTCG 2858
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TTCAGTACGTGCAATGCTCAGTATATACAATGTTTCCGCCAATATCAGGTTATGGAATGG 2918
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GGTGAACTAATACATCCGGATTGGTGAGATCAGGGTGATTGGGCTTTTTTTTTCAGTTTT 2978
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TTCTCATGATGAAAATTTTGGGATGTTTCTCATTTAAGTGGGATGGTAATGTTGAACTAT 3038
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 AAATCTGGTGTGTAGCATTGCTACTGTGGCAGCAGTTTGCTGCTTACTGGCTGAATAAAC 3098
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TCATAAAATTGTTTGCCTATGTGCTCAATGATGTACAGTTGACACCATCCTCCCCAGCTC 3158
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CCCGCCGTCACCACGCATCCCACCGCGTCGCCCCCAGTCTCCGCATCGTCAACTGCCTCC 3218
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GCTCCTATGTGAGTCATCAATCGCCTCCACTCCACCTCGTCAACCACCTCCGCGCGTCCA 3278
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CTTGTCTTGGCCTCTTCAACAACGTCTCCCGCCTCGACCTGATTCACCGGAAGATCCATC 3338
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GCCGTCATCTGGCAGGAGCAGAAGCGACCAATTCATCTTGGCATATTTCTTAAGATCACC 3398
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GACACCAGCCGCGCCGTGATTCCGACACCGGGACTCCTTGCCCCTGCGACAGCTTCTCTA 3458
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CCGCAACACCGTCAAGTGATATCTTTTGCACCCTGACCGGAAACCTCTCTACTGCGTTGC 3518
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GAACAGGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCC 3578
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 CTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTAATCCTCAGCAAGTGATCCTT 3638
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TGCCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGT 3698
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 ACTAAAATATTGGGCATAATGAGAATATGGCTTGNTGAGCTTTATGGGATTATGGTCTTT 3758
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 GATTGAGTGCTTTCTATAGGTCGTACTATTAATATGTCCTACTGCATGTTTTACAAGTTG 3818
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TGCTACCTATTTATTTATTTTCTAAAAGGACCAACAGGTGCTATACTCATTCAACATGTT 3878
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TATGAGCTGTCATTATTGATGTTAGTAAAACTTGGATTGGCAGTTTTCATGGTTTCAAAT 3938
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 TAGNACCTACAGTCTTCATTTTACAGTATAGACCAAATGAAGCGGCAACATTTTTTAGTA 3998
consensus_11228#1 ------------------------------------------------------------
consensus_11228#0 ATGTATTAAGATGGTTACCATCAA 4022
consensus_11228#1 ------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||