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Oryza sativa
cluster # 11235 cluster # 11235       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11235#0 length = 2784 sequences # 6  
 consensus_11235#1 length = 804 sequences # 2  
consensusID : consensus_11235#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2784
fasta sequence 
                              [GACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGTGCCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACTTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTGATATTGATACATGTGAAAACGTCATGGTTGCGTGTGGTCGTGGTGGACTCCATGAGGATGCAAGGGAAGTTCTTGACTATATCACAACAGAAGGAATGGTGCCTACTGCAAAGGCCTACACTGGCCTAGTTGAAGCGCTTGGCCATGCAGCTATGTATGAGGAGGCTTATGTTGCATTCAACATGATGACTGAAATTGGAAGCTTGCCAACTATAGAGACCTACAATGCTCTTGCAAATGCATTTGCAAAGGGTGGCCTTTTCCAGGAGGCTGAGGCCATCTTTTCTCGAATGACCAACAATGCTGCTATTCAGAAAGACAAGGATTCATTCGATGCTCTCATTGAAGCGTATTGCCAGGGTGCACAGTTAGATGATGCAGTTAAGGCATACATGGAGATACGGAAGTCCAGGTTTAATCCAGATGAACGCTCCCTTGAGGGGGTACTCAATGCCTACTGCATAGCAGGTGTTATAGATGAGAGCAAAGAGCAGTTTGAAGAACTTCAGTCCATGGTGACTGTTCCTAGCATTATTGCTTATTGCATGATGTTGTCACTCTATGCCAGGAATGACAGGTGGACAGATGCTTATGATCTGTTGGAAGAAATGAAAACAAACCGTGCTAGTAGTACACATCAAGTGATTGCTTCCATGATCAAAGGGGAGTATGACGATGACTCCAATTGGCAAATGGTCGAATATGTTCTTGACAACAGTAACTTGGAAGGCTGTGACTACAGTTTACGATTCTTTAATGCACTCCTTGATGTCCTTTGGTGGTTTGGCCAGAAGGGTCGAGCTGCAAGGGTTTTGGATCAAGCATTAAAATATGGGCTCTTCCCTGAGTTATTTCGTGATACCAAGCTGGTCTGGTCTGCAGATGTGCATAGGATGTCAGTAGGTGGATCATTAGTGGCTGTGTCAGTGTGGCTCAATAAACTTTATGATAGACTAAAAGGCGATGAAGATCTTCCTCAGTTAGCCTCAGTTGTTGTATTGAGGGGACAAATGAAGAAAAGCACAGTTACAAGGGGATTGCCGATTGCAAAAGTTGTGTACTCTTTTCTGAATGATACACTATCATCATCCTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGTTTGAAGTCCCAGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATTTCTGGTTTTGTTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACTAGGGAGTCCCAAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAAAAGGAATCAGAACTCCTTGCACTGTGAGTTTTCAGGAGCTTGCTGCCTCCTTCCTTTTGCAGATGCGATGTTATCTGGCCGAACAAGGGAAGATAAGACACAGAATGTCTCACAATTTTGAAGTTTGGGCAATCAGATCGTCCTAATGTGCAATGAGATGGCCTTATGCCTTTGCAGTGCTCTCTTGCTTCACTATATGCAGTGGAC-GTGACTCCC-AATAT-CCACAATCTTGCCTAGAACCCAGCACATAAGCATGAGTTCGTGATACT-GGATTTGCGCTAACTTGATAGACA-ATGCTGGACTTCCAGTTGTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGCTCACTTGTTCTATATGACATCTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACGTTT-TGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTCCTACATGATGTATCTGTGTGCCCGATCTTTTTAATGCAAGCTGCCTTCTAAAAATATTCTTGTGTATGATGCTGCCATGCTGGTGTTTGTTTTTGAATTCGTGGTGTAAGATCTTGAAAGCTTATATAAGTAACAAATATGAAGGTTTAATTTGTGCAATGACATTAAAAAAAAAAAAAAAAAAACCGAGACTA]

[+] EMBL AK065308             [GACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGTGCCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACTTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTGATATTGATACATGTGAAAACGTCATGGTTGCGTGTGGTCGTGGTGGACTCCATGAGGATGCAAGGGAAGTTCTTGACTATATCACAACAGAAGGAATGGTGCCTACTGCAAAGGCCTACACTGGCCTAGTTGAAGCGCTTGGCCATGCAGCTATGTATGAGGAGGCTTATGTTGCATTCAACATGATGACTGAAATTGGAAGCTTGCCAACTATAGAGACCTACAATGCTCTTGCAAATGCATTTGCAAAGGGTGGCCTTTTCCAGGAGGCTGAGGCCATCTTTTCTCGAATGACCAACAATGCTGCTATTCAGAAAGACAAGGATTCATTCGATGCTCTCATTGAAGCGTATTGCCAGGGTGCACAGTTAGATGATGCAGTTAAGGCATACATGGAGATACGGAAGTCCAGGTTTAATCCAGATGAACGCTCCCTTGAGGGGGTACTCAATGCCTACTGCATAGCAGGTGTTATAGATGAGAGCAAAGAGCAGTTTGAAGAACTTCAGTCCATGGTGACTGTTCCTAGCATTATTGCTTATTGCATGATGTTGTCACTCTATGCCAGGAATGACAGGTGGACAGATGCTTATGATCTGTTGGAAGAAATGAAAACAAACCGTGCTAGTAGTACACATCAAGTGATTGCTTCCATGATCAAAGGGGAGTATGACGATGACTCCAATTGGCAAATGGTCGAATATGTTCTTGACAACAGTAACTTGGAAGGCTGTGACTACAGTTTACGATTCTTTAATGCACTCCTTGATGTCCTTTGGTGGTTTGGCCAGAAGGGTCGAGCTGCAAGGGTTTTGGATCAAGCATTAAAATATGGGCTCTTCCCTGAGTTATTTCGTGATACCAAGCTGGTCTGGTCTGCAGATGTGCATAGGATGTCAGTAGGTGGATCATTAGTGGCTGTGTCAGTGTGGCTCAATAAACTTTATGATAGACTAAAAGGCGATGAAGATCTTCCTCAGTTAGCCTCAGTTGTTGTATTGAGGGGACAAATGAAGAAAAGCACAGTTACAAGGGGATTGCCGATTGCAAAAGTTGTGTACTCTTTTCTGAATGATACACTATCATCATCCTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGTTTGAAGTCCCAGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATTTCTGGTTTTGTTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACTAGGGAGTCCCAAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAAAAGGAATCAGAACTCCTTGCACTGTGAGTTTTCAGGAGCTTGCTGCCTCCTTCCTTTTGCAGATGCGATGTTATCTGGCCGAACAAGGGAAGATAAGACACAGAATGTCTCACAATTTTGAAGTTTGGGCAATCAGATCGTCCTAATGTGCAATGAGATGGCCTTATGCCTTTGCAGTGCTCTCTTGCTTCACTATATGCAGTGGAC GTGACTCCC AATAT CCACAATCTTGCCTAGAACCCAGCACATAAGCATGAGTTCGTGATACT GGATTTGCGCTAACTTGATAGACA ATGCTGGACTTCCAGTTGTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGCTCACTTGTTCTATATGACATTTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACG                                                                                                                                                                                                                                                     ]
[-] EMBL CB627559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTATCATCATCNTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGTTTGAAGTCCCAGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATTTCTGGTTTTGTTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACTAGGGAGTCCCAAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAAAAGGAATCAGAACTCCTTGCACTGTGAGTTTTCAGGAGCTTGCTGCCTCCTTCCTTTTGCAGATGCGATGTTATCTGGCCAAACAAGGGAAGATAAGACACAGAATGTCTCACAATTTTGAAGTTTGGGCAATCAGATCGTCCTAATGTGCAATGAGATGGCCTTATGCCTTTGCAGTGCTCTCTTGCTTCACTATATGCAGTGGAC GTGACTCCC AATAT CCACAATCTTGCCTAGAACCCAGCACATAAGCATGAGTTCGTGATACT GGATTTGCGCTAACTTGATAGACA ATGCTGGACTTCCAGTTGTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGCTCACTTGTTCTATATGACATCTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACGTTT TGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTCCTACATGATGTATCTGTGTGCC                                                                                                                                                                            ]
[+] EMBL BI812263             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cagacACTCTCATTT CCATCCCCTGGGTCCACA TGTACACTAGGGAGTCCCAA CTGATAATGGTTCTGCCCA TTGACTGATGAAACC TGGTAGAAGAAAAGGAATCAGAACTCCTTGC CTGTGAGTTTTCAGGAGCTT CTGCCTCCTTCCTTTT CAGAT CGATGTTATCTGGCCGAACCAGGGAAGATAAGACACAG ATGTCTCACCATTTTGAA TTTGGGC ATCAGATCGTCCTAATGTGC ATGAGATGGCC TATGCCCTT CAGTGCTCTCTTGCTTCACTATATGCAGTGGACGGTGACTCCCAAATATCCCAC ATCTTGCCTAGAACCCAGCACATAAGCATGAGTTCGTGATACTGGGATTTGCGCTAACTTGATAGACACATGCTGGACTTCCAGTTGTGTTTCAGGATGTAGCACATAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGCTCACTTGTTCTATATGACATCTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACGTTT TGATGGAAATAATATCGGGAGTTTGTAaaaaaaaaa                                                                                                                                                                                                             ]
[-] EMBL CB638690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATGGCCTTATGCCTTTGCAGTGCTCTCTTGCTTCACTATATGCAGTGGAC GTGACTCCC AATAT CCACAATCTTGCTTAGAACCCAGCACATAAGCATGAGTTCGTGATACT GGATTTGCGCTAACTTGATAGACA ATGCTGGACTTCCAGTTGTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGCTCACTTGTTCTATATGACATTTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACGTTTCTGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTCCTACATGATGTATCAGTGTGCCCGATCTTTTTAATGCAAGCTGCCTTCTAAAAATATTCTTGTGTATGATGCTGCCATGCTGGTGTTTGTTTTTGAATTCGTGGTGTAAGATCTTGAAAGCTTATATAAGTAACAAATATGAAGGTTTAATTTG                                        ]
[+] EMBL BE229570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgagGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTNGTTGTWAGTTGCTCACTTGTTCTATATGACATCTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACGTTT TGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTCCTACATGATGTATCTGTGTGCCCGATCTTTTTAATGCAAGCTKCCTTCTAAAAATATTCTTGTGTATGATGCTGCCATGCTGGTGTTTGTTTTT                                                                                                    ]
[-] EMBL CF324936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAATATATGGATTCACTCGATGCAAGTAAAACATGATGATGAGTCAGTGGAACACATCAGTCATCGATACGTTTCTGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTCCTACATGATGTATCAGTGTGCCCGATCTTTTTAATGCAAGCTGCCTTCTAAAAATAATAAAGTGTATGATGCTGCCATGCTGGTGTTTGTTTTTGAATTCGAAAAAAAAAATCTTGAAAGCTTATATAAGTAACAAATATGAAGGTTTAATTTGTGCAATGACATTAAAAAAAAAAAAAAAAAAACCGAGACTA]




>consensus_11235#0
GACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCG
CGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTC
GTGCCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGC
CATGACCCTTCCCCCTCCGTTCGTCCCGACTTCACCACCTACAACACCCTCCTCGCCGCT
GCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCC
GGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGT
AACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGAC
CCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCG
GTAGCTGTGCTGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGT
GTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGC
GAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTT
GGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAA
GTAGAGCCTGATATTGATACATGTGAAAACGTCATGGTTGCGTGTGGTCGTGGTGGACTC
CATGAGGATGCAAGGGAAGTTCTTGACTATATCACAACAGAAGGAATGGTGCCTACTGCA
AAGGCCTACACTGGCCTAGTTGAAGCGCTTGGCCATGCAGCTATGTATGAGGAGGCTTAT
GTTGCATTCAACATGATGACTGAAATTGGAAGCTTGCCAACTATAGAGACCTACAATGCT
CTTGCAAATGCATTTGCAAAGGGTGGCCTTTTCCAGGAGGCTGAGGCCATCTTTTCTCGA
ATGACCAACAATGCTGCTATTCAGAAAGACAAGGATTCATTCGATGCTCTCATTGAAGCG
TATTGCCAGGGTGCACAGTTAGATGATGCAGTTAAGGCATACATGGAGATACGGAAGTCC
AGGTTTAATCCAGATGAACGCTCCCTTGAGGGGGTACTCAATGCCTACTGCATAGCAGGT
GTTATAGATGAGAGCAAAGAGCAGTTTGAAGAACTTCAGTCCATGGTGACTGTTCCTAGC
ATTATTGCTTATTGCATGATGTTGTCACTCTATGCCAGGAATGACAGGTGGACAGATGCT
TATGATCTGTTGGAAGAAATGAAAACAAACCGTGCTAGTAGTACACATCAAGTGATTGCT
TCCATGATCAAAGGGGAGTATGACGATGACTCCAATTGGCAAATGGTCGAATATGTTCTT
GACAACAGTAACTTGGAAGGCTGTGACTACAGTTTACGATTCTTTAATGCACTCCTTGAT
GTCCTTTGGTGGTTTGGCCAGAAGGGTCGAGCTGCAAGGGTTTTGGATCAAGCATTAAAA
TATGGGCTCTTCCCTGAGTTATTTCGTGATACCAAGCTGGTCTGGTCTGCAGATGTGCAT
AGGATGTCAGTAGGTGGATCATTAGTGGCTGTGTCAGTGTGGCTCAATAAACTTTATGAT
AGACTAAAAGGCGATGAAGATCTTCCTCAGTTAGCCTCAGTTGTTGTATTGAGGGGACAA
ATGAAGAAAAGCACAGTTACAAGGGGATTGCCGATTGCAAAAGTTGTGTACTCTTTTCTG
AATGATACACTATCATCATCCTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGT
TTGAAGTCCCAGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATT
TCTGGTTTTGTTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACT
AGGGAGTCCCAAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAA
AAGGAATCAGAACTCCTTGCACTGTGAGTTTTCAGGAGCTTGCTGCCTCCTTCCTTTTGC
AGATGCGATGTTATCTGGCCGAACAAGGGAAGATAAGACACAGAATGTCTCACAATTTTG
AAGTTTGGGCAATCAGATCGTCCTAATGTGCAATGAGATGGCCTTATGCCTTTGCAGTGC
TCTCTTGCTTCACTATATGCAGTGGACGTGACTCCCAATATCCACAATCTTGCCTAGAAC
CCAGCACATAAGCATGAGTTCGTGATACTGGATTTGCGCTAACTTGATAGACAATGCTGG
ACTTCCAGTTGTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGT
TGTTAGTTGCTCACTTGTTCTATATGACATCTCGTGCCTGCCCCATTCGGCAAGAACGAA
CCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGA
ACACATCAGTCATCGATACGTTTTGATGGAAATAATATCGGGAGTTTGTATCACCGTATG
GTTCCAGTTCCTACATGATGTATCTGTGTGCCCGATCTTTTTAATGCAAGCTGCCTTCTA
AAAATATTCTTGTGTATGATGCTGCCATGCTGGTGTTTGTTTTTGAATTCGTGGTGTAAG
ATCTTGAAAGCTTATATAAGTAACAAATATGAAGGTTTAATTTGTGCAATGACATTAAAA
AAAAAAAAAAAAAAACCGAGACTA

consensusID : consensus_11235#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 804
fasta sequence 
                              [TCCTGNACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAAGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTGATATTGATACATGTGAAAACGTCA]

[+] EMBL CB638691             [TCCTGNACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAAGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGA                                                                                                                                                                                                           ]
[+] EMBL CB627560             [      ACCTCTCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGGCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCGGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTGATATTGATACATGTGAAAACGTCA]




>consensus_11235#1
TCCTGNACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCT
ACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCG
GCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCG
ATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTT
CCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTAC
GCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGC
CGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCC
GTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGT
ATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGC
TGCGGCAGATGCAAGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTG
ATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAA
CAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTG
GCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTG
ATATTGATACATGTGAAAACGTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11235#0      -----GACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCT 55
consensus_11235#1      TCCTGNACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCT 60
                             ******************************************************

consensus_11235#0      ACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCG 115
consensus_11235#1      ACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCG 120
                       ************************************************************

consensus_11235#0      GCGTCGTGCCCACCG--------------------------------------------- 130
consensus_11235#1      GCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCG 180
                       ****** ********                                             

consensus_11235#0      ATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTT 190
consensus_11235#1      ATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTT 240
                       ************************************************************

consensus_11235#0      CCCCCTCCGTTCGTCCCGACTTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTAC 250
consensus_11235#1      CCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTAC 300
                       ******************** ***************************************

consensus_11235#0      GCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGC 310
consensus_11235#1      GCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGC 360
                       ************************************************************

consensus_11235#0      CGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCC 370
consensus_11235#1      CGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCC 420
                       ************************************************************

consensus_11235#0      GTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGT 430
consensus_11235#1      GTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGT 480
                       ************************************************************

consensus_11235#0      ATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGC 490
consensus_11235#1      ATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGC 540
                       ************************************************************

consensus_11235#0      TGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTG 550
consensus_11235#1      TGCGGCAGATGCAAGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTG 600
                       ************* **********************************************

consensus_11235#0      ATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAA 610
consensus_11235#1      ATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAA 660
                       ************************************************************

consensus_11235#0      CAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTG 670
consensus_11235#1      CAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTG 720
                       ************************************************************

consensus_11235#0      GCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTG 730
consensus_11235#1      GCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTG 780
                       ************************************************************

consensus_11235#0      ATATTGATACATGTGAAAACGTCATGGTTGCGTGTGGTCGTGGTGGACTCCATGAGGATG 790
consensus_11235#1      ATATTGATACATGTGAAAACGTCA------------------------------------ 804
                       ************************                                    

consensus_11235#0      CAAGGGAAGTTCTTGACTATATCACAACAGAAGGAATGGTGCCTACTGCAAAGGCCTACA 850
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CTGGCCTAGTTGAAGCGCTTGGCCATGCAGCTATGTATGAGGAGGCTTATGTTGCATTCA 910
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      ACATGATGACTGAAATTGGAAGCTTGCCAACTATAGAGACCTACAATGCTCTTGCAAATG 970
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CATTTGCAAAGGGTGGCCTTTTCCAGGAGGCTGAGGCCATCTTTTCTCGAATGACCAACA 1030
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      ATGCTGCTATTCAGAAAGACAAGGATTCATTCGATGCTCTCATTGAAGCGTATTGCCAGG 1090
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      GTGCACAGTTAGATGATGCAGTTAAGGCATACATGGAGATACGGAAGTCCAGGTTTAATC 1150
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CAGATGAACGCTCCCTTGAGGGGGTACTCAATGCCTACTGCATAGCAGGTGTTATAGATG 1210
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AGAGCAAAGAGCAGTTTGAAGAACTTCAGTCCATGGTGACTGTTCCTAGCATTATTGCTT 1270
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      ATTGCATGATGTTGTCACTCTATGCCAGGAATGACAGGTGGACAGATGCTTATGATCTGT 1330
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TGGAAGAAATGAAAACAAACCGTGCTAGTAGTACACATCAAGTGATTGCTTCCATGATCA 1390
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AAGGGGAGTATGACGATGACTCCAATTGGCAAATGGTCGAATATGTTCTTGACAACAGTA 1450
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      ACTTGGAAGGCTGTGACTACAGTTTACGATTCTTTAATGCACTCCTTGATGTCCTTTGGT 1510
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      GGTTTGGCCAGAAGGGTCGAGCTGCAAGGGTTTTGGATCAAGCATTAAAATATGGGCTCT 1570
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TCCCTGAGTTATTTCGTGATACCAAGCTGGTCTGGTCTGCAGATGTGCATAGGATGTCAG 1630
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TAGGTGGATCATTAGTGGCTGTGTCAGTGTGGCTCAATAAACTTTATGATAGACTAAAAG 1690
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      GCGATGAAGATCTTCCTCAGTTAGCCTCAGTTGTTGTATTGAGGGGACAAATGAAGAAAA 1750
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      GCACAGTTACAAGGGGATTGCCGATTGCAAAAGTTGTGTACTCTTTTCTGAATGATACAC 1810
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TATCATCATCCTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGTTTGAAGTCCC 1870
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATTTCTGGTTTTG 1930
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACTAGGGAGTCCC 1990
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAAAAGGAATCAG 2050
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AACTCCTTGCACTGTGAGTTTTCAGGAGCTTGCTGCCTCCTTCCTTTTGCAGATGCGATG 2110
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TTATCTGGCCGAACAAGGGAAGATAAGACACAGAATGTCTCACAATTTTGAAGTTTGGGC 2170
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AATCAGATCGTCCTAATGTGCAATGAGATGGCCTTATGCCTTTGCAGTGCTCTCTTGCTT 2230
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CACTATATGCAGTGGACGTGACTCCCAATATCCACAATCTTGCCTAGAACCCAGCACATA 2290
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AGCATGAGTTCGTGATACTGGATTTGCGCTAACTTGATAGACAATGCTGGACTTCCAGTT 2350
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      GTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGC 2410
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TCACTTGTTCTATATGACATCTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGG 2470
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGT 2530
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CATCGATACGTTTTGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTC 2590
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CTACATGATGTATCTGTGTGCCCGATCTTTTTAATGCAAGCTGCCTTCTAAAAATATTCT 2650
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      TGTGTATGATGCTGCCATGCTGGTGTTTGTTTTTGAATTCGTGGTGTAAGATCTTGAAAG 2710
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      CTTATATAAGTAACAAATATGAAGGTTTAATTTGTGCAATGACATTAAAAAAAAAAAAAA 2770
consensus_11235#1      ------------------------------------------------------------
                                                                                   

consensus_11235#0      AAAAACCGAGACTA 2784
consensus_11235#1      --------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)