cluster # 11238

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11238 cluster # 11238 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11238#0 length = 1467 sequences # 8
consensusID : consensus_11238#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1467
fasta sequence
                              [AGCAGAGCACAGCAGAGGAGATCGAGCAGAGACAGACAGACCCGCAGGCGGAAGCGGAGGCAGGGCAGGCAGGCAGCAGCAACAATCCCCCACCTGCGCGTGTGCGTGTCTGTTTCGGTGCTTCCTCCTCCTCCTCGCCATGGCGCTCCTCCTCCTCCGACGCGGCGGCGGCTTCGCTGCGGCCACGGTCCTCGCGGTCGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGAGGCGGCCGTGAGGGACCTCAGGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGCCGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCGCAGCGTCGCGTCCGTCATGCGCCTCCAGTTCCACGACTGCTTCGTCAACGGGTGCGACGGGTCGGTGCTGATGGACGCAACGCCGACGATGGCGGGGGAGAAGGAGGCGCTCTCCAACATCAACTCGCTCCGCTCCTTCGACGTCGTCGACGAGATCAAGGAGGCGCTGGAGGAGCGCTGCCCTGGCGTCGTCTCCTGCGCCGACATCATCGTCATGGCCGCCCGCGACGCCGTCGCCCTGACAGGTGGGCCCTTCTGGGACGTGAGGCTTGGGCGCGAGGACAGCCTGACGGCGAGCCAGGAGGACTCGGACAACATCATGCCGAGCCCACGCGCCAACGCCACCACCCTCATCAAGCTCTTCGCCGGCTACAACCTCACCGTCACCGACCTCGTCGCGCTCTCCGGCTCGCACTCCATCGGCGAGGCCCGCTGCTTCTCCATCGTCTTCCGCCTCTACAACCAGTCCGGCTCCGGCAGGCCCGACCCCAACATGGACCCCGCCTACCGCGCGGGGCTCGACTCGCTCTGCCCCCGCGGCGGCGACGAGAACGTCACCGGAGGCATGGACGCCACCCCGCTCGTCTTCGACAACCAGTACTTCAAGGACCTCGTCCGCCTCCGCGGCTTCCTCAACTCCGACCAGACGCTCTTC-TCCGAC-AACGCCGGGACCCGGCTCGCCGTGAGGAAATTCGGCGA-GGA-CCA-GGGCGC-CTTC-TTCAGGGCCTTCGTC-GAAGGGATGATCAAGATGGGGGAGCTGCAGAACCCCA-GGAA-GGGAGAGATA-CGACGCA-ACTGCCG-TGTCGCCAATGCCCCGGCG-CCGCCG-CCTGTGGAGG-CGGAGGTGGC-GGCGACGTCCA-AGGCGGTGGTCC-TGGTGGACTTCTGACGAACGAGCTGCTAGTCCCCTGACTCCCCA-GCTG-TT-GGTGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGGTCCGATGGCAGGTTTGCACCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGATAAATAACTGAGAAATCGAGCTAATGATCCTTGCCTGAAAAAAAAAAGNNTCTCAAAAAAAAAAAAAAAA]

[+] EMBL AK069281             [AGCAGAGCACAGCAGAGGAGATCGAGCAGAGACAGACAGACCCGCAGGCGGAAGCGGAGGCAGGGCAGGCAGGCAGCAGCAACAATCCCCCACCTGCGCGTGTGCGTGTCTGTTTCGGTGCTTCCTCCTCCTCCTCGCCATGGCGCTCCTCCTCCTCCGACGCGGCGGCGGCTTCGCTGCGGCCACGGTCCTCGCGGTCGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGAGGCGGCCGTGAGGGACCTCAGGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGCCGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCGCAGCGTCGCGTCCGTCATGCGCCTCCAGTTCCACGACTGCTTCGTCAACGGGTGCGACGGGTCGGTGCTGATGGACGCAACGCCGACGATGGCGGGGGAGAAGGAGGCGCTCTCCAACATCAACTCGCTCCGCTCCTTCGACGTCGTCGACGAGATCAAGGAGGCGCTGGAGGAGCGCTGCCCTGGCGTCGTCTCCTGCGCCGACATCATCGTCATGGCCGCCCGCGACGCCGTCGCCCTGACAGGTGGGCCCTTCTGGGACGTGAGGCTTGGGCGCGAGGACAGCCTGACGGCGAGCCAGGAGGACTCGGACAACATCATGCCGAGCCCACGCGCCAACGCCACCACCCTCATCAAGCTCTTCGCCGGCTACAACCTCACCGTCACCGACCTCGTCGCGCTCTCCGGCTCGCACTCCATCGGCGAGGCCCGCTGCTTCTCCATCGTCTTCCGCCTCTACAACCAGTCCGGCTCCGGC GGCCCGACCCCAACATGGACCCCGCCTACCGCGCGGGGCTCGACTCGCTCTGCCCCCGCGGCGGCGACGAGAACGTCACCGGAGGCATGGACGCCACCCCGCTCGTCTTCGACAACCAGTACTTCAAGGACCTCGTCCGCCTCCGCGGCTTCCTCAACTCCGACCAGACGCTCTTC TCCGAC AACGCCGGGACCCGGCTCGCCGTGAGGAAATTCGGCGA GGA CCA GGGCGC CTTC TTCAGGGCCTTCGTC GAAGGGATGATCAAGATGGGGGAGCTGCAGAACCCCA GGAA GGGAGAGATA CGACGCA ACTGCCG TGTCGCCAATGCCCCGGCG CCGCCG CCTGTGGAGG CGGAGGTGGC GGCGACGTCCA AGGCGGTGGTCC TGGTGGACTTCTGACGAACGAGCTGCTAGTCCCCTGACTCCCCA GCTG TT GGTGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGGTCCGATGGCAGGTTTGCACCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGA                                                                      ]
[+] EMBL CB661467             [                                              GGCGGAAGCGGAGGCAGGGCAGGCAGGCAGCATCAACAATCCCCCACCTGCGCGTGTGCGTGTCTGTTTCGGTGCTTCCTCCTCCTCCTCGCCATGGCGCTCCTCCTCCTCCGACGCGGGGGCGGCTTCTCTGCGGCCACGGTCCTCGCGGACGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGAGGCGGCCGTGAGGGACCTCAAGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGCCGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCACAGCGTCGCGTCCGTCATGCGCCTCCAGTTCCACGACTGCTTCCTCAACGGGTGCGACGGGTCGGTGCTGATGGACGCAACGCCAACCATGGAGGGGGACAAGGAGGCGCTCTCCAAGATCAACTCGCTCCACTCCTTCGACGTCGTCGACTACATCAAAGATGCGCTGGAGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C72652               [                                                                                     TCCCCCACCTGCGCGTGTGCGTGTCTGTTTCGGTGCTTCCTCCTCCTCCTCGCCATGGCGCTCCTCCTCCTCCGACGCGGCGGCGGCTTCGCTGCGGCCACGGTNCTCGCGGTCGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGAGGCGGCCGTGAGGGACCTCAGGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGCCGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCGCAGCGTCGCGTCCGTCATGCGCCTCCAGTTCCACGACTGCTTCGTCAACGGGTGCGACGGGTCGGTGCTGATGGACGCAACGCCGACGATGGCGGGGGAGAAGGAGGCGCTCTCCAACATCAACTCGCTCCGCTCCTTCGANGTCGTna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB661468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AACCTCACCGTCACCGACCTCGTCGCGCTCTCCGGCTCGCACTCCATCGGCGAGGCCCGCTGCTTCTCCATCGTCTTCCGCCTCTACAACCAGTCCGGCTCCGGCAGGCCCGACCCCAACATGGACCCCGCCTACCGCGCGGGGCTCGACTCGCTCTGCCCCCGCGGCGGCGACGAGAACGTCACCGGAGGCATGGACGCCACCCCGCTCGTCTTCGACAACCAGTACTTCAAGGACCTCGTCCGCCTCCGCGGCTTCCTCAACTCCGACCAGACGCTCTTC TCCGAC AACGCCGGGACCCGGCTCGCCGTGAGGAAATTCGGCGA GGA CCA GGGCGC CTTC TTCAGGGCCTTCGTC GAAGGGATGATCAAGATGGGGGAGCTGCAGAACCCCA GGAA GGGAGAGATA CGACGCA ACTGCCG TGTCGCCAATGCCCCGGCG CCGCCG CCTGTGGAGG CGGAGGTGGC GGCGACGTCCA AGGCGGTGGTCC TGGTGGACTTCTGACGAACGAGCTGCTAGTCCCCTGACTCCCCA GCTG TT GGTGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGGTCCGATGGCAGGTTTGCACCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGATAAATAACTGAGA                                                         ]
[-] EMBL CB655744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCGGCAGGCCCGACCCCAACATGGACCCCGCCTACCGGGGGGGGGTTGACTTGTTTTGCCCCCGCGGCGGGGAAGAGAACGTCCCCGGAGGCATGGACGCCCCCCCGCTTGTTTTTGACAACCAGTACTTCAAGGACCTTGTCCGCCTCCGGGGGTTCCTTAACTCCGACCAGACGTTTTTT TCCGAC AACGCCGGGACCCGGCTTGCCGTGAGGAAATTTGGGGA GGA CCA GGGGGC CTTT TTCAGGGCCTTTGTT GAAGGGATGATCAAGATGGGGGAGCTGCAGAACCCCA GGAA GGGAGAGATT CGACGCA ACTGCCG TGTTGCCAATGCCCCGGCG CCCCCC CCTGTGGAGG GGGAGGTGGC GGCGACGTCCA AGGCGGTGGTTC TGGTGGACTTTTGACGAACGAGGTGCTAGTCCCCTGACTCCCCA GCTG TT GGTGTTTGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGGTCCGATGGCAGGTTTGCCCCTCCCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGATAAATAACTGAGAAATCGAGCTAATGAT                                          ]
[+] EMBL BQ906235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGTCCGCCTCCGCGGCTTCCTCAACTCCGACCAGACGCTNTTCTTCCGACAAACGCCGGGACCCGGCTCTCCGTGAGGAAATTCGGCGATGGATCCACGGGCCCACTTCTTTCAGGGCCTTCGTCTGAAGGGATGATCAAGATGGGGGAGCTGCAGAACCCCACGGAATGGGAGAGATATCGGCGCACACTGCCGCTGTCGCCAATGCCCCGGCG CCGCCG CCTGTGGAGGCCGGAGGTGGC GGCGACGTCCACAGGCGGTGGTCC TGGTGGACTTCTGACGAACGAGCTGCTAGTCCCCTGACTCCCCA GCTG TTAGGTGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGGTCCGATGGCAGGTTTGCACCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGATAAATAACTGAGAAAaaaaaaa                                                ]
[+] EMBL BI810931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGGGCGCCCCCCGCCCTTTGGAGG CGGAGTTGGCGGGCGACGTCCA A GCGGT GTCCTTGGTGGACTTCTGACGAACGAGCTGCTAGTCCCCTGACTCCCCACGCTGTTT GGTGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGGTCCGATGGCAGGTTTGCACCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGATAAATAACTGAGAAATCGAGCTAATGATCCTTGCCTGAAAAAAAAAA                       ]
[+] EMBL AU094044             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCA AGGCGGTGGTCC TGGTGGACTTCTGACGAACGAGCTGCTNGTCCCCTGACTCCCCN GCTG TT GGTGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGNGTTTTTGGTCCGATGGCAGGTTTGCNCCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGCCGATTATTGAATGGTGATAAATAACTGNGAAATCGAGCTNATGATCATTGCCTGATGTGGTTTGGNNTCTCAAAAAAAAAAAAAAAA]




>consensus_11238#0
AGCAGAGCACAGCAGAGGAGATCGAGCAGAGACAGACAGACCCGCAGGCGGAAGCGGAGG
CAGGGCAGGCAGGCAGCAGCAACAATCCCCCACCTGCGCGTGTGCGTGTCTGTTTCGGTG
CTTCCTCCTCCTCCTCGCCATGGCGCTCCTCCTCCTCCGACGCGGCGGCGGCTTCGCTGC
GGCCACGGTCCTCGCGGTCGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGA
GGCGGCCGTGAGGGACCTCAGGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGC
CGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCGCAGCGTCGCGTCCGT
CATGCGCCTCCAGTTCCACGACTGCTTCGTCAACGGGTGCGACGGGTCGGTGCTGATGGA
CGCAACGCCGACGATGGCGGGGGAGAAGGAGGCGCTCTCCAACATCAACTCGCTCCGCTC
CTTCGACGTCGTCGACGAGATCAAGGAGGCGCTGGAGGAGCGCTGCCCTGGCGTCGTCTC
CTGCGCCGACATCATCGTCATGGCCGCCCGCGACGCCGTCGCCCTGACAGGTGGGCCCTT
CTGGGACGTGAGGCTTGGGCGCGAGGACAGCCTGACGGCGAGCCAGGAGGACTCGGACAA
CATCATGCCGAGCCCACGCGCCAACGCCACCACCCTCATCAAGCTCTTCGCCGGCTACAA
CCTCACCGTCACCGACCTCGTCGCGCTCTCCGGCTCGCACTCCATCGGCGAGGCCCGCTG
CTTCTCCATCGTCTTCCGCCTCTACAACCAGTCCGGCTCCGGCAGGCCCGACCCCAACAT
GGACCCCGCCTACCGCGCGGGGCTCGACTCGCTCTGCCCCCGCGGCGGCGACGAGAACGT
CACCGGAGGCATGGACGCCACCCCGCTCGTCTTCGACAACCAGTACTTCAAGGACCTCGT
CCGCCTCCGCGGCTTCCTCAACTCCGACCAGACGCTCTTCTCCGACAACGCCGGGACCCG
GCTCGCCGTGAGGAAATTCGGCGAGGACCAGGGCGCCTTCTTCAGGGCCTTCGTCGAAGG
GATGATCAAGATGGGGGAGCTGCAGAACCCCAGGAAGGGAGAGATACGACGCAACTGCCG
TGTCGCCAATGCCCCGGCGCCGCCGCCTGTGGAGGCGGAGGTGGCGGCGACGTCCAAGGC
GGTGGTCCTGGTGGACTTCTGACGAACGAGCTGCTAGTCCCCTGACTCCCCAGCTGTTGG
TGTTCGAGAGGAGCTGCTCAGATATGAGAGTGTTGTGGCTATTCATATATGAGTTTTTGG
TCCGATGGCAGGTTTGCACCTACCTGTAAGCTTGTGATTTCAGGGTTACCCGCTTATTGC
CGATTATTGAATGGTGATAAATAACTGAGAAATCGAGCTAATGATCCTTGCCTGAAAAAA
AAAAGNNTCTCAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case