Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11248 cluster # 11248       Sequences # 8       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11248#0 length = 2620 sequences # 3  
 consensus_11248#1 length = 1599 sequences # 4  
consensus_11248#2 length = 255 sequences # 1  
consensusID : consensus_11248#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2620
fasta sequence 
                              [AGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCAGGCCTGTGGCTTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCGTTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGG-TCGGGTGTCGACTGAAATAGATGC-TCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGGTATGTACATATGCTTTGCCTAATTTGATCATGGCCCTATTTCTTATAGTGGGCAATGGTATAGATGCTGGGTGTATGGCAATACTTATCTTTTTTGTGGGGTTAGAGAACTGCCTTCAATTTGTTTAGTCTTAAGATACTTCAGTAAGTATAAGGGAACTAATAAAGATTGTTTCTTATTATCATGCATCACTTATTAATGATGGCTCAATTGCATTGTAAGTATACATTTTGCTTTTATGTCAGCAGAAGAAGAGGTTTTCTATTGAATTTACCTGGTGAATTGTAATTACTCAATTAGGCCTGACTAGTTACTGTTGATAACAAGCTTATCTATAAAGGACTTGCACTATTGCAGGTGCATAAAAGCCATAAACTTACTCTTGCAATTTACATAAGATGGTATTGTTGGAGAGAGCAGACTGCAGGATGTGTAGCTCACCTAGTAGTTAGTAACTGAGAACTCGTAATCATTTTTTTTGTGTGCCTGATCATTCTTCTTCAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGCGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGTATTTTTCTTATTACAGATCAAGATTGATCGCAATGGATGTTAGTTTGTACAGAACTAATATTTCTGAAATGTAGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGGTTTGCTCACTTATCCTGGATTTTGTGCAGAGTCTTATATCATGCATTCTGTAGCTCCACCAAACTACTCGCTATAAGAGACTCATATTAGGGGTGTGATGTTTTATCTAAAATATATAGGATCTTCACTTGTCATGTGCTTTAACACTACTAGAGATGAAATAAGGAAGGAAAATAATATTTGGACTGTTTAGATCACCCTTAAAAGGTCATGTCAAAGCTCGTAGTAGGTGTAATCATGATTCACCAAACAGTTACTAGAACAATACAAACAAGTCATTGACATCCTATAAGAAGAGGAAAAATAAAACAAGAGAAGATAAGTGATTATATTTTTTATATGGCACCTTCATGCTAACTGTTCATATTTCAAATGATACCACGAATGCAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTTTCTCGAGTATTTCATTAGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGCTGGATTGTTCTGAAGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTATAAAAAGATGGGTGCCATCAGCTAGTACTGTGAATTCCCATTTTCAGTAAAATGGAAGA]

[+] EMBL C74853               [AGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCAGGCCTGTGGCTTNTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACG ACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGGTCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATANAAAGTTCAAGAGTGCTATAGATACAGCGTTGGCAGACGGTGAATGTAACACAATGGAGAAG CCGAAGACC GATGT CTGTTT CTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK101430             [        TCTCGCCATTCCTCCGATCCCCACCTCCACCAATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCAGGCCTGTGGCCTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCGTTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGG TCGGGTGTCGACTGAAATAGATGC TCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGGTATGTACATATGCTTTGCCTAATTTGATCATGGCCCTATTTCTTATAGTGGGCAATGGTATAGATGCTGGGTGTATGGCAATACTTATCTTTTTTGTGGGGTTAGAGAACTGCCTTCAATTTGTTTAGTCTTAAGATACTTCAGTAAGTATAAGGGAACTAATAAAGATTGTTTCTTATTATCATGCATCACTTATTAATGATGGCTCAATTGCATTGTAAGTATACATTTTGCTTTTATGTCAGCAGAAGAAGAGGTTTTCTATTGAATTTACCTGGTGAATTGTAATTACTCAATTAGGCCTGACTAGTTACTGTTGATAACAAGCTTATCTATAAAGGACTTGCACTATTGCAGGTGCATAAAAGCCATAAACTTACTCTTGCAATTTACATAAGATGGTATTGTTGGAGAGAGCAGACTGCAGGATGTGTAGCTCACCTAGTAGTTAGTAACTGAGAACTCGTAATCATTTTTTTTGTGTGCCTGATCATTCTTCTTCAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGCGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGTATTTTTCTTATTACAGATCAAGATTGATCGCAATGGATGTTAGTTTGTACAGAACTAATATTTCTGAAATGTAGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGGTTTGCTCACTTATCCTGGATTTTGTGCAGAGTCTTATATCATGCATTCTGTAGCTCCACCAAACTACTCGCTATAAGAGACTCATATTAGGGGTGTGATGTTTTATCTAAAATATATAGGATCTTCACTTGTCATGTGCTTTAACACTACTAGAGATGAAATAAGGAAGGAAAATAATATTTGGACTGTTTAGATCACCCTTAAAAGGTCATGTCAAAGCTCGTAGTAGGTGTAATCATGATTCACCAAACAGTTACTAGAACAATACAAACAAGTCATTGACATCCTATAAGAAGAGGAAAAATAAAACAAGAGAAGATAAGTGATTATATTTTTTATATGGCACCTTCATGCTAACTGTTCATATTTCAAATGATACCACGAATGCAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTTTCTCGAGTATTTCATTAGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGCTGGATTGTTCTGAAGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTATAAAAAGATGGGTGCCATCAGCTAGTACTGTGAATTCCCATTTTCAGTAAAATGGAAGA]
[+] EMBL CF324186             [                                                                                                                                                    TTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCGTTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGNTCGGGTGTCGACTGAAATAGATGCNTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_11248#0
AGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAATGGCGCTCTCCATCTCCAC
GCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTC
GGCGGCGATGTCGGCCAGGCCTGTGGCTTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCG
TGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGA
TGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAA
GTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCC
GGATACAAAGTTCAAGAGTGCTATAGATACAGCGTTGGCAGACGGTGAATGTAACACAAT
GGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGC
TGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAATAGATGCTCGGTTGGCTTA
TGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGA
TGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTC
GAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGGTATGTACA
TATGCTTTGCCTAATTTGATCATGGCCCTATTTCTTATAGTGGGCAATGGTATAGATGCT
GGGTGTATGGCAATACTTATCTTTTTTGTGGGGTTAGAGAACTGCCTTCAATTTGTTTAG
TCTTAAGATACTTCAGTAAGTATAAGGGAACTAATAAAGATTGTTTCTTATTATCATGCA
TCACTTATTAATGATGGCTCAATTGCATTGTAAGTATACATTTTGCTTTTATGTCAGCAG
AAGAAGAGGTTTTCTATTGAATTTACCTGGTGAATTGTAATTACTCAATTAGGCCTGACT
AGTTACTGTTGATAACAAGCTTATCTATAAAGGACTTGCACTATTGCAGGTGCATAAAAG
CCATAAACTTACTCTTGCAATTTACATAAGATGGTATTGTTGGAGAGAGCAGACTGCAGG
ATGTGTAGCTCACCTAGTAGTTAGTAACTGAGAACTCGTAATCATTTTTTTTGTGTGCCT
GATCATTCTTCTTCAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTG
TACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGA
TTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGCGAAGAAAGTGTATG
CCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGC
AAGATGTGTTTAGCCTCCTGGGGTATTTTTCTTATTACAGATCAAGATTGATCGCAATGG
ATGTTAGTTTGTACAGAACTAATATTTCTGAAATGTAGGATTGACTACATCATTGCACCT
CTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATACTGACGTGAAGTATGGTTAT
GTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGGTTTGC
TCACTTATCCTGGATTTTGTGCAGAGTCTTATATCATGCATTCTGTAGCTCCACCAAACT
ACTCGCTATAAGAGACTCATATTAGGGGTGTGATGTTTTATCTAAAATATATAGGATCTT
CACTTGTCATGTGCTTTAACACTACTAGAGATGAAATAAGGAAGGAAAATAATATTTGGA
CTGTTTAGATCACCCTTAAAAGGTCATGTCAAAGCTCGTAGTAGGTGTAATCATGATTCA
CCAAACAGTTACTAGAACAATACAAACAAGTCATTGACATCCTATAAGAAGAGGAAAAAT
AAAACAAGAGAAGATAAGTGATTATATTTTTTATATGGCACCTTCATGCTAACTGTTCAT
ATTTCAAATGATACCACGAATGCAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGC
AATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGC
ACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTC
TATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCAC
GGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTG
TGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTCAAGAACA
TCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTTTCTCGAGTATTTCATTAGCCCGT
GAGATGTGTACCATGAAATGTCACCCAAATGCTCTGCTGGATTGTTCTGAAGTCTGAACT
GAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTATAAAAAGATGGGTGCCATC
AGCTAGTACTGTGAATTCCCATTTTCAGTAAAATGGAAGA

consensusID : consensus_11248#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1599
fasta sequence 
                              [CTCCCTCATTCTCTCCCACAGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCGGGCCTGTGGCCTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCATTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAATAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGTGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTC-ACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTCTCTCGAGTATTTCATTAGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGCTGGATTGTTCTGAAGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTAC]

[+] EMBL AK058325             [CTCCCTCATTCTCTCCCACAGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCGGGCCTGTGGCCTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCATTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAATAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGTGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTC ACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAGACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTCTCTCGAGTATTTCATTAGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGCTGGATTGTTCTGAAGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTAC]
[-] EMBL CB662910             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGCGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTC ACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGAGGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATA                                                                                                                          ]
[-] EMBL CB663051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gtTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGCGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTC ACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATA                                                                                                                          ]
[-] EMBL CB654342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACATTTGTGTACAGTATTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGTGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCTACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTATGGGTTGGAAGGATATGTGACCCAAGCACCCTGAGTGGAGGAACTATTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCTAAGAATAATAGCAACACCCACGGACAGTGCTGGCCAGCATTTCATGGTTCCCTTCAAAGAATACTTCTCTTAGCCTGTATGTGTCAGTACTTTGTAGTTCTATAGCTA                                                                                                                                                                                         ]




>consensus_11248#1
CTCCCTCATTCTCTCCCACAGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAA
TGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGG
TCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCGGGCCTGTGGCCTTTAGCCTCCGGA
GGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACG
AGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCG
TGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGC
TCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCATTGGCAG
ACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGG
CCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAA
TAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGA
AGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACAT
GGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACAT
TTGTGTACAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGA
TCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATG
AAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGTGAAGAAAGTGTATGCCTACA
TTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATG
TGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGG
AAGAATCTGTCACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTC
TTGGCAAAACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAG
CAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGA
ACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGAA
CACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAAGAATAATAACAA
CAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAATACTTCTCTTAGC
CTGTCTGTGTTTGTACTTTGTAGTTCTCTAGCTATCTAGCAAATCTCACGATGACATGTC
AAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTCTCTCGAGTATTTCATT
AGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGCTGGATTGTTCTGAAGT
CTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTAC

consensusID : consensus_11248#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 255
fasta sequence 
                              [GATTACCGGGATGTCTTCCTCGAGTACTTTCATTTACGCCCCGATGAGATCGTTGCTACCCCACGTGANACAGTGTCACCCCAGAAGTGCCTCTGCCGTGGACTTGTTTCCTGAAGGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTGTAAAAAGATGGGTGCCATCAGCTAGTACCTGTGAATTCCCATTTTCAGTAAAATGGAAGNCATGCTGATGAAAAAAATGCTGGTCAAAA]

[+] EMBL BQ906377             [GATTACCGGGATGTCTTCCTCGAGTACTTTCATTTACGCCCCGATGAGATCGTTGCTACCCCACGTGANACAGTGTCACCCCAGAAGTGCCTCTGCCGTGGACTTGTTTCCTGAAGGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTGTAAAAAGATGGGTGCCATCAGCTAGTACCTGTGAATTCCCATTTTCAGTAAAATGGAAGNCATGCTGATGAAAAAAATGCTGGTCAAAA]




>consensus_11248#2
GATTACCGGGATGTCTTCCTCGAGTACTTTCATTTACGCCCCGATGAGATCGTTGCTACC
CCACGTGANACAGTGTCACCCCAGAAGTGCCTCTGCCGTGGACTTGTTTCCTGAAGGTCT
GAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTGTAAAAAGATGGGTG
CCATCAGCTAGTACCTGTGAATTCCCATTTTCAGTAAAATGGAAGNCATGCTGATGAAAA
AAATGCTGGTCAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11248#0      -------------------AGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAA 41
consensus_11248#1      CTCCCTCATTCTCTCCCACAGTTAGCATCTCGCCATTCCTCCGATCCCCACCTCCACCAA 60
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGG 101
consensus_11248#1      TGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGG 120
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCAGGCCTGTGGCTTTTAGCCTCCGGA 161
consensus_11248#1      TCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCGGGCCTGTGGCCTTTAGCCTCCGGA 180
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      GGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACG 221
consensus_11248#1      GGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACG 240
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      AGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCG 281
consensus_11248#1      AGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCG 300
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGC 341
consensus_11248#1      TGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGC 360
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCGTTGGCAG 401
consensus_11248#1      TCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCATTGGCAG 420
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      ACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGG 461
consensus_11248#1      ACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGG 480
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAA 521
consensus_11248#1      CCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAA 540
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGA 581
consensus_11248#1      TAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGA 600
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      AGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACAT 641
consensus_11248#1      AGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACAT 660
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      GGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACAT 701
consensus_11248#1      GGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACAT 720
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TTGTGTACAGGTATGTACATATGCTTTGCCTAATTTGATCATGGCCCTATTTCTTATAGT 761
consensus_11248#1      TTGTGTACAG-------------------------------------------------- 730
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      GGGCAATGGTATAGATGCTGGGTGTATGGCAATACTTATCTTTTTTGTGGGGTTAGAGAA 821
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CTGCCTTCAATTTGTTTAGTCTTAAGATACTTCAGTAAGTATAAGGGAACTAATAAAGAT 881
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TGTTTCTTATTATCATGCATCACTTATTAATGATGGCTCAATTGCATTGTAAGTATACAT 941
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TTTGCTTTTATGTCAGCAGAAGAAGAGGTTTTCTATTGAATTTACCTGGTGAATTGTAAT 1001
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TACTCAATTAGGCCTGACTAGTTACTGTTGATAACAAGCTTATCTATAAAGGACTTGCAC 1061
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TATTGCAGGTGCATAAAAGCCATAAACTTACTCTTGCAATTTACATAAGATGGTATTGTT 1121
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      GGAGAGAGCAGACTGCAGGATGTGTAGCTCACCTAGTAGTTAGTAACTGAGAACTCGTAA 1181
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TCATTTTTTTTGTGTGCCTGATCATTCTTCTTCAGTTTTGCCCAAGCAGCAGCTGCAGCA 1241
consensus_11248#1      -----------------------------------TTTTGCCCAAGCAGCAGCTGCAGCA 755
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACT 1301
consensus_11248#1      CAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACT 815
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCT 1361
consensus_11248#1      CACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCT 875
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TTGGCGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCT 1421
consensus_11248#1      TTGGTGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCT 935
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      GCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGTATTTTTCTTATTACAGA 1481
consensus_11248#1      GCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGG------------------ 977
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TCAAGATTGATCGCAATGGATGTTAGTTTGTACAGAACTAATATTTCTGAAATGTAGGAT 1541
consensus_11248#1      ----------------------------------------------------------AT 979
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATAC 1601
consensus_11248#1      TGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATAC 1039
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTT 1661
consensus_11248#1      TGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAAACGTACAACTT 1099
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CACTGAAGAGGAGGTTTGCTCACTTATCCTGGATTTTGTGCAGAGTCTTATATCATGCAT 1721
consensus_11248#1      CACTGAAGAGGAG----------------------------------------------- 1112
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TCTGTAGCTCCACCAAACTACTCGCTATAAGAGACTCATATTAGGGGTGTGATGTTTTAT 1781
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CTAAAATATATAGGATCTTCACTTGTCATGTGCTTTAACACTACTAGAGATGAAATAAGG 1841
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      AAGGAAAATAATATTTGGACTGTTTAGATCACCCTTAAAAGGTCATGTCAAAGCTCGTAG 1901
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TAGGTGTAATCATGATTCACCAAACAGTTACTAGAACAATACAAACAAGTCATTGACATC 1961
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CTATAAGAAGAGGAAAAATAAAACAAGAGAAGATAAGTGATTATATTTTTTATATGGCAC 2021
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      CTTCATGCTAACTGTTCATATTTCAAATGATACCACGAATGCAGCTTGTGAAGTGGGACC 2081
consensus_11248#1      --------------------------------------------CTTGTGAAGTGGGACC 1128
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      AATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGG 2141
consensus_11248#1      AATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGG 1188
consensus_11248#2      ------------------------------------------------------GATTAC 6
                                                                             * **  

consensus_11248#0      AAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTC 2201
consensus_11248#1      AAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTC 1248
consensus_11248#2      CGGGATGTCTTCCTCGAGTACTTTCATTT-----ACGCCCCGATGAGATCGTTGCTACCC 61
                         **** * *    * ** **    * *      ** *  **   *****    ** * *

consensus_11248#0      CGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAA 2261
consensus_11248#1      CGAATGTTTGAACACATTCTATGATGAGGACCAGACCATGCCACAGTCTTCTATTCCAAA 1308
consensus_11248#2      CACGTG-----ANACAGTGTCACCCCAGAAGT-GCCTCTGCCGTGGACTTGTTTCCTGAA 115
                       *   **     * *** * *      ** *   * *  ****   * *** * * *  **

consensus_11248#0      GAATAATAAC-AACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAA 2320
consensus_11248#1      GAATAATAAC-AACAGCCACGGACAGTGCTGGCCAGCATTTGCTCGTTCCCTTCAAAGAA 1367
consensus_11248#2      GGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTTTTTGTAAAAAGAT 175
                       *      *   **    **  *     * *    * ** *   *  **   *  ***** 

consensus_11248#0      TACTTCTCTTAGCCTGTCTGTGTTTGTAC---TTTGTAGTTCTCTAGCTATCTAGCAAAT 2377
consensus_11248#1      TACTTCTCTTAGCCTGTCTGTGTTTGTAC---TTTGTAGTTCTCTAGCTATCTAGCAAAT 1424
consensus_11248#2      GGGTGCCATCAGCTAGTACCTGTGAATTCCCATTTTCAGTAAAATGGAAGNCATGCTGAT 235
                          * *  * ***  **   ***   * *   ***  ***    * *    *  **  **

consensus_11248#0      CTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTT 2437
consensus_11248#1      CTCACGATGACATGTCAAGAACATCTTTGTTTTCTTTTCGCAAAGATTGGATACGGATTC 1484
consensus_11248#2      GAAAAAAATGCTGGTCAAAA---------------------------------------- 255
                          *  *   *  ***** *                                        

consensus_11248#0      TCTCGAGTATTTCATTAGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGC 2497
consensus_11248#1      TCTCGAGTATTTCATTAGCCCGTGAGATGTGTACCATGAAATGTCACCCAAATGCTCTGC 1544
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TGGATTGTTCTGAAGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTACGTTTT 2557
consensus_11248#1      TGGATTGTTCTGAAGTCTGAACTGAATCTTCAGAGTTGCAGTTACTTATCACTAC----- 1599
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      TTTATAAAAAGATGGGTGCCATCAGCTAGTACTGTGAATTCCCATTTTCAGTAAAATGGA 2617
consensus_11248#1      ------------------------------------------------------------
consensus_11248#2      ------------------------------------------------------------
                                                                                   

consensus_11248#0      AGA 2620
consensus_11248#1      ---
consensus_11248#2      ---


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)