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Oryza sativa
cluster # 11260 cluster # 11260       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11260#0 length = 1610 sequences # 5  
consensus_11260#1 length = 670 sequences # 2  
consensus_11260#2 length = 499 sequences # 1  

consensusID : consensus_11260#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1610
fasta sequence
                              [CCGCCGCGGCGATCACAAGGAGATCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCACGCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGGGGCCCCGCTAGGGTCGCCTTTCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTCTGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCGGCGCCTGGCTTCCAGCTTGACCGCACCACCACGGGATCGTCGTACTTCTACGGGCGGCAGCTCGCCAGGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTGTTCGCCGCCGCCCTCGAGGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCTGATAGCTGTGTTCCTCTGTACAATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAAAAGTTTTGTAGACAGTTTTGTTGACAAGACCGAGAAGCGTTACAATCCAAGCATGTCTCCTGTTATCCTAAAGGACAAATGGAGGAAAGGATCACAGTGGGTAGCATTGACCAGAAGACATGCAGAAGTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAGATGGTAGTAACTAAGGCTTTGCTTGGACAGAAGCCTAATTATCGAAGATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGATTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTACATCCGTTCCATGTTTCCTATTTGCCAGGAAGTTCTCCTACAGTGCAGCCATGCATCTATTAGAGGCTGGGACGGTCGGTCCACTAAAATCTGCTCTACTGGCTTAACTATTACTACAAAATTTTGATCACACGAGTTCTCATTTTTAGTTTATCATGGCCGGCCATAGTTTATAGTCCATCAGCATCATTAGGTTCAGTAGCATCTGCAGCTGAATCTGCGGAGCGACCGGAGTACCATAGTGTATTATTATTGATAGTGTTCAGATTTGTGCATAGACCACTGGGACAGAAGAGGTTTGATGTACAGAGCATCAGTTTTGGAGCTTGTCAGCTCGGCTACATTGCAATATCCAACGACAGAATGAGGCAGGATCAGATCAGGTATCTTGTGACGAAGAATGAAGAATGCTCAACCCTTCTCCCGATGGTATTTACTAATTACAGGATAGGAAAGCTGTAACAATATCTTGATAAATGATCATATACACATTAACAAATTTAATAAAGTACAAAGAAAATATTTTTTGTTAAAAAAAAAAAGA]

[+] EMBL AK064145             [CCGCCGCGGCGATCACAAGGAGATCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCACGCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGGGGCCCCGCTAGGGTCGCCTTTCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTCTGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCGGCGCCTGGCTTCCAGCTTGACCGCACCACCACGGGATCGTCGTACTTCTACGGGCGGCAGCTCGCCAGGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTGTTCGCCGCCGCCCTCGAGGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCTGATAGCTGTGTTCCTCTGTACAATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAAAAGTTTTGTAGACAGTTTTGTTGACAAGACCGAGAAGCGTTACAATCCAAGCATGTCTCCTGTTATCCTAAAGGACAAATGGAGGAAAGGATCACAGTGGGTAGCATTGACCAGAAGACATGCAGAAGTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAGATGGTAGTAACTAAGGCTTTGCTTGGACAGAAGCCTAATTATCGAAGATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGATTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTACATCCGTTCCATGTTTCCTATTTGCCAGGAAGTTCTCCTACAGTGCAGCCATGCATCTATTAGAGGCTGGGACGGTCGGTCCACTAAAATCTGCTCTACTGGCTTAACTATTACTGCAAAATTTTGATCACACGAGTTCTCATTTTTAGTTTATCATGGCCGGCCATAGTTTATAGTCCATCAGCATCATTAGGTTCAGTAGCATCTGCAGCTGAATCTGCGGAGCGACCGGAGTACCATAGTGTATTATTATTGATAGTGTTCAGATTTGTGCATAGACCACTGGGACAGAAGAGGTTTGATGTACAGAGCATCAGTTTTGGAGCTTGTCAGCTCGGCTACATTGCAATATCCAACGACAGAATGAGGCAGGATCAGATCAGGTATCTTGTGACGAAGAATGAAGAATGCTCAACCCTTCTCCCGATGGTATTTACTAATTACAGGATAGGAAAGCTGTAACAATATCTTGATAAATGATCATATACACATTAACAAATTTAATAAAGTACAAAGAAAAT                       ]
[+] EMBL CF323846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTGATGGCTTCGACTAAAAGTTTTGTAGACAGTTTTGTTGACAAGACCGAGAAGCGTTACAATCCAAGCATGTCTCCTGTTATCCTAAAGGACAAATGGAGGAAAGGATCACAGTGGGTAGCATTGACCAGAAGACATGCAGAAGTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAGATGGTAGTAACTAAGGCTTTGCTTGGACAGAAGCCTAATTATCGAAGATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGATTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB622739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTACATCCGTTCCATGTTTCCTATTTGCCAGGAAGTTCTCCTACAGTGCAGCCATGCATCTATTAGAGGCTGGGACGGTCGGTCCACTAAAATCTGCTCTACTGGCTTAACTATTACTACAAAATTTTGATCACACGAGTTCTCATTTTTAGTTTATCATGGCCGGCCATAGTTTATAGTCCATCAGCATCATTAGGTTCAGTAGCATCTGCAGCTGAATCTGCGGAGCGACCGGAGTACCATAGTGTATTATTATTGATAGTGTTCAGATTTGTGCATAGACCACTGGGACAGAAGAGGTTTGATGTACAGAGCATCAGTTTTGGAGCTTGTCAGCTCGGCTACATTGCAATATCCAACGACAGAATGAGGCAGGATCAGATCAGGTATCTTGTGACGAAGAATGAAGAATGCTCAACCCTTCTCCCTATGGTATTTACTAATTACAGGATAGGAAAGCTGTAACAATATCTTGATAAATGATCATATACACATTAACAAATGGAATAAAGTACAAAGAAAGTATTTTTTGTTAAAAAAAAAAAGA]
[-] EMBL CF312055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTACTACCAAATTTTGATCACACGAGTTCTCATTTTTAGTTTATCATGGCCGGCCATAGTTTATAGTCCATCAGCATCATTAGGTTCAGTAGCATCTGCAGCTGAATCTGCGGAGCGACCGGAGTACCATAGTGTATTATTATTGATAGTGTTCAGATTTGTGCATAGACCACTGGGACAGAAGAGGTTTGATGTACAGAGCATCAGTTTTGGAGCTTGTCAGCTCGGCTACATTGCAATATCCAACGACAGAATGAGGCAGGATCAGATCAGGTATCT  TGACGAAGAATGAAGAATGCGCAACCCTTCTCCCGATGGTATTTACTAATTACAGGATAGGAAAGCTGTAACAATATCTTGATAAATGATCATATACACATTAACAAATTTAATAAAGTACAAAGAAAATATTTTTTGTTAAAAAAAAAA   ]
[-] EMBL D42538               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          nngnAGAGGTTTGATGTACAGAGCATCNGTTTTGGA CTTGTCAGCTCGGCTACATTGCNATATCCAACGACAGAATGAGGCAGGGTCAGNTCAGGTATCTTGTGACGAAGAATGAAGAATGCTCANCCCTTCTCCCGATGGTATTTACTAATTACAGGATAGGGAAGCTGTAGCTATATCTTGATAAGTGATCATATACACATTAACAAATTTAATAAAGTACAAAGAAAATA                      ]


>consensus_11260#0 CCGCCGCGGCGATCACAAGGAGATCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCAC GCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGG GGCCCCGCTAGGGTCGCCTTTCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTC TGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCGGCG CCTGGCTTCCAGCTTGACCGCACCACCACGGGATCGTCGTACTTCTACGGGCGGCAGCTC GCCAGGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTG TTCGCCGCCGCCCTCGAGGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCTGATAGCTGT GTTCCTCTGTACAATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAAAAGTTTT GTAGACAGTTTTGTTGACAAGACCGAGAAGCGTTACAATCCAAGCATGTCTCCTGTTATC CTAAAGGACAAATGGAGGAAAGGATCACAGTGGGTAGCATTGACCAGAAGACATGCAGAA GTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAGATGGTAGTA ACTAAGGCTTTGCTTGGACAGAAGCCTAATTATCGAAGATTAGGATTTGGACTTCGTCGA AAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGATTGCATTCCAGATGAACACTAT GTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACA TATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACA TTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTG AATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTACATCCGTTCCATGT TTCCTATTTGCCAGGAAGTTCTCCTACAGTGCAGCCATGCATCTATTAGAGGCTGGGACG GTCGGTCCACTAAAATCTGCTCTACTGGCTTAACTATTACTACAAAATTTTGATCACACG AGTTCTCATTTTTAGTTTATCATGGCCGGCCATAGTTTATAGTCCATCAGCATCATTAGG TTCAGTAGCATCTGCAGCTGAATCTGCGGAGCGACCGGAGTACCATAGTGTATTATTATT GATAGTGTTCAGATTTGTGCATAGACCACTGGGACAGAAGAGGTTTGATGTACAGAGCAT CAGTTTTGGAGCTTGTCAGCTCGGCTACATTGCAATATCCAACGACAGAATGAGGCAGGA TCAGATCAGGTATCTTGTGACGAAGAATGAAGAATGCTCAACCCTTCTCCCGATGGTATT TACTAATTACAGGATAGGAAAGCTGTAACAATATCTTGATAAATGATCATATACACATTA ACAAATTTAATAAAGTACAAAGAAAATATTTTTTGTTAAAAAAAAAAAGA



consensusID : consensus_11260#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 670
fasta sequence
                              [GAGATCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCACGCCGCGCCCGCGCACGACGCCGACGATGCCGGCGGCGAAGAGGTCGGCGTCGGCGGGGTCGGTGCTGGCCCTCACGGTGGCCGGACGCCGCGCCGCGCGGGCCCGCCTCTGCCTCCGCCTGGCCGCGCCGCTCTCGTTCCTGCTCCTCCTCGCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGGGGCCCCGCTAGGGTCGCCTTCCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTCTGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCTGCGCCTGGATTCCAGCTTGACCGCACCACCACAGGATCGTCGTACTTCTACGGGCGGTAGCTCGCCAAGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTGTTCGCCGCCGCCCTCGAAGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCAGATAGCTGTGTTCCTCTGTACGATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAACAGTTTTGTAGAC]

[+] EMBL CB622738             [GAGATCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCACGCCGCGCCCGCGCACGACGCCGACGATGCCGGCGGCGAAGAGGTCGGCGTCGGCGGGGTCGGTGCTGGCCCTCACGGTGGCCGGACGCCGCGCCGCGCGGGCCCGCCTCTGCCTCCGCCTGGCCGCGCCGCTCTCGTTCCTGCTCCTCCTCGCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGGGGCCCCGCTAGGGTCGCCTTCCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTCTGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCTGCGCCTGGATTCCAGCTTGACCGCACCACCACAGGATCGTCGTACTTCTACGGGCGGTAGCTCGCCAAGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTGTTCGCCGCCGCCCTCGAAGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCAGATAGCTGTGTTCCTCTGTACGATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAACAGTTTTGTAGAC]
[+] EMBL CB638288             [                                                        GCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCACGCCGCGCCCGCGCAAGACGCCGACGATGCCGGCGGCGAAGAGGTCGGCGTCGGCGGGGTCGGTGCTGGCCCTCACGGTGGCCGGACGCCGCGCCGCGCGGGCCCGCCTCTGCCTCCGCCTGGCCGCGCCGCTCTCGTTCCTGCTCCTCCTCGCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGGGGCCCCGCTAGGGTCGCCTTCCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTCTGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCGGCGCCTGGCTTCCAGCTTGACCGCACCACCACGGGATCGTCGTACTTCTACGGGCGGCAGCTCGCCAGGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCATAG                                                                                                                                       ]


>consensus_11260#1 GAGATCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCTCGCTTTTAAATGCCA CCGAGGCCCACGGTGTGGGCTGGTCCACCGCACGCCGCGCCCGCGCACGACGCCGACGAT GCCGGCGGCGAAGAGGTCGGCGTCGGCGGGGTCGGTGCTGGCCCTCACGGTGGCCGGACG CCGCGCCGCGCGGGCCCGCCTCTGCCTCCGCCTGGCCGCGCCGCTCTCGTTCCTGCTCCT CCTCGCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTC CGGGGGCCCCGCTAGGGTCGCCTTCCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTT CCTCTGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTC TGCGCCTGGATTCCAGCTTGACCGCACCACCACAGGATCGTCGTACTTCTACGGGCGGTA GCTCGCCAAGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGAT GTTGTTCGCCGCCGCCCTCGAAGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCAGATAG CTGTGTTCCTCTGTACGATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAACAG TTTTGTAGAC



consensusID : consensus_11260#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 499
fasta sequence
                              [TGGACTGAAGGAGTAGAAAATCCTAAAGGACAAATGGAGGAAGGATCACAGTGGGTAGCATTGACCAGAAGACATGCAGAAGTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAGATGGTAGTAACTAAGGCTTTGCTTGGACAGAAGCCTAATTGTCGAAGATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGACTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTACATCCGTTCCAT]

[+] EMBL CF312054             [TGGACTGAAGGAGTAGAAAATCCTAAAGGACAAATGGAGGAAGGATCACAGTGGGTAGCATTGACCAGAAGACATGCAGAAGTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAGATGGTAGTAACTAAGGCTTTGCTTGGACAGAAGCCTAATTGTCGAAGATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGACTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAACTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAAATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGCAATACTACATCCGTTCCAT]


>consensus_11260#2 TGGACTGAAGGAGTAGAAAATCCTAAAGGACAAATGGAGGAAGGATCACAGTGGGTAGCA TTGACCAGAAGACATGCAGAAGTAGTCGTTGGCGACAAACTTGTCTTGCAAGTATTCAGA AGGCATTGCAAGATGGTAGTAACTAAGGCTTTGCTTGGACAGAAGCCTAATTGTCGAAGA TTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGCATGAC TGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAATCAATGGACATGAAAATGAA CTGGAAAGAAGAACTTTGACATATACATCATGGAACCAGTCCTCAGATCCTAAAGACAAA ATGACTTGGCATCCAATGACATTTGAGTATGAGTCAGCAAGTCCTGAGCAAATCAATTCA ATTAAGGGTATTGATCATGTGAATTATCAGATGGAGCACAGAACTGAGTGGTGCCAATGC AATACTACATCCGTTCCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11260#0      CCGCCGCGGCGATCACAAGGAGATCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 60
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      TCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCCACGGTGTGGGCTGGTCCACCGCAC 120
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      GCCGCGCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGG 180
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      GGCCCCGCTAGGGTCGCCTTTCTCTTCCTCGTCCGCGCGGGCGTCCCCCTCGACTTCCTC 240
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      TGGGACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCGGCG 300
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      CCTGGCTTCCAGCTTGACCGCACCACCACGGGATCGTCGTACTTCTACGGGCGGCAGCTC 360
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      GCCAGGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTG 420
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      TTCGCCGCCGCCCTCGAGGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCTGATAGCTGT 480
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      GTTCCTCTGTACAATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAAAAGTTTT 540
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ---------------------------------------------------GAGATCTCC 9
                                                                                   

consensus_11260#0      GTAGACAGTTTTGTTGACAAGACCGAGAAGCGTTACAATCCAAGCATGTCTCCTGTTATC 600
consensus_11260#2      -----------------------------------TGGACTGAAGGAGTA---GAAAATC 22
consensus_11260#1      TCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCTCGCTTTTAAATGCCACCGAGGCCC 69
                                                                      *           *

consensus_11260#0      CTAA---AGGACAAATGGAGGAAAGGATCACA-GTGGGTAGCATTGACCAGA--AGACAT 654
consensus_11260#2      CTAA---AGGACAAATGGAGGAA-GGATCACA-GTGGGTAGCATTGACCAGA--AGACAT 75
consensus_11260#1      ACGGTGTGGGCTGGTCCACCGCACGCCGCGCCCGCGCACGACGCCGACGATGCCGGCGGC 129
                               **          * * *   * *  * *     *   *** *     *    

consensus_11260#0      GCAGAAGTAGTCGTTGGCGA---CAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAG 711
consensus_11260#2      GCAGAAGTAGTCGTTGGCGA---CAAACTTGTCTTGCAAGTATTCAGAAGGCATTGCAAG 132
consensus_11260#1      GAAGAGGTCGGCGTCGGCGGGGTCGGTGCTGGCCCTCACGGTGGCCGGACGCCGCGCCGC 189
                       * *** ** * *** ****    *     ** *   ** *    * * * **   **   

consensus_11260#0      ATGGTAGTAACTAAGGCTTTGCTTGGACAGAAG---------------CCTAATTATCGA 756
consensus_11260#2      ATGGTAGTAACTAAGGCTTTGCTTGGACAGAAG---------------CCTAATTGTCGA 177
consensus_11260#1      GCGGGCCCGCCTCTGCCTCCGCCTGGCCGCGCCGCTCTCGTTCCTGCTCCTCCTCGCCGC 249
                         **      **  * **  ** *** *                    ***  *   ** 

consensus_11260#0      A--GATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGC 814
consensus_11260#2      A--GATTAGGATTTGGACTTCGTCGAAAGCAGATATCGAAAGGATCTACTCGAATGGAGC 235
consensus_11260#1      GCTGCTCCGCACCCAGCCCCTCCCGGCGCCGCCTTCCGCGCCGCCGCCCTCCGGGGGCCC 309
                          * *  * *    * *     **    *   *  **    *     ***    **  *

consensus_11260#0      ----ATGATTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAA--TCAATGGAC 868
consensus_11260#2      ----ATGACTGCATTCCAGATGAACACTATGTGCAGACATTATTTTCAA--TCAATGGAC 289
consensus_11260#1      CGCTAGGGTCGCCTTCCTCTTCCTCG-TCCGCGCGGGCGTCCCCCTCGACTTCCTCTGGG 368
                           * *   ** ****   *   *  *  * ** * * *     ** *  **    *  

consensus_11260#0      ATG---------AAAATGAACTGGAAAGAAGAACTTTGACATATA--CATCATGGAACCA 917
consensus_11260#2      ATG---------AAAATGAACTGGAAAGAAGAACTTTGACATATA--CATCATGGAACCA 338
consensus_11260#1      ACGCCTTCTTCCGCAACGGCGAGGAGGGCAAGTTCTCGGTGTACGTCCACTCTGCGCCTG 428
                       * *           ** *    ***  * *     * *   **    **   **   *  

consensus_11260#0      GTCCTCAGAT------CCTAAAGACAAAATGACTTGGCATCCA---ATGACATTTGAGTA 968
consensus_11260#2      GTCCTCAGAT------CCTAAAGACAAAATGACTTGGCATCCA---ATGACATTTGAGTA 389
consensus_11260#1      GATTCCAGCTTGACCGCACCACCACAGGATCGTCGTACTTCTACGGGCGGTAGCTCGCCA 488
                       *    *** *      *   *  ***  **       * ** *     *  *  *    *

consensus_11260#0      TGAGTCAGCAAGTCCTG---AGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTA 1025
consensus_11260#2      TGAGTCAGCAAGTCCTG---AGCAAATCAATTCAATTAAGGGTATTGATCATGTGAATTA 446
consensus_11260#1      AGAGCGTAAAGGTGGCGTGGGGCGAACCTACCATGGTGGAGGCAGAGAGGATGTTGTTCG 548
                        ***     * **   *    ** ** * *      *   ** *  **  ****   *  

consensus_11260#0      TC-----------AGATGGAGCA---CAGAACTGAGTGGTGCCAATGCAATACTACATCC 1071
consensus_11260#2      TC-----------AGATGGAGCA---CAGAACTGAGTGGTGCCAATGCAATACTACATCC 492
consensus_11260#1      CCGCCGCCCTCGAAGATCCAGCGAACCAGCGCTTTGTTTTGCTCTCAGATAGCTGTGTTC 608
                        *           ****  ***    ***  **  **  ***      *   **   * *

consensus_11260#0      GTTCCATGTTTCCTATTTGCCAGGAAGTTCTCCTACAGTGCAGCCATGCATCTATTAGAG 1131
consensus_11260#2      GTTCCAT----------------------------------------------------- 499
consensus_11260#1      -CTCTGTACGATTTCAGCTACATATATACTTACTTGATGGCTTCGACTAACAGTTTTGTA 667
                         **  *                                                     

consensus_11260#0      GCTGGGACGGTCGGTCCACTAAAATCTGCTCTACTGGCTTAACTATTACTACAAAATTTT 1191
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      GAC--------------------------------------------------------- 670
                                                                                   

consensus_11260#0      GATCACACGAGTTCTCATTTTTAGTTTATCATGGCCGGCCATAGTTTATAGTCCATCAGC 1251
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      ATCATTAGGTTCAGTAGCATCTGCAGCTGAATCTGCGGAGCGACCGGAGTACCATAGTGT 1311
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      ATTATTATTGATAGTGTTCAGATTTGTGCATAGACCACTGGGACAGAAGAGGTTTGATGT 1371
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      ACAGAGCATCAGTTTTGGAGCTTGTCAGCTCGGCTACATTGCAATATCCAACGACAGAAT 1431
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      GAGGCAGGATCAGATCAGGTATCTTGTGACGAAGAATGAAGAATGCTCAACCCTTCTCCC 1491
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      GATGGTATTTACTAATTACAGGATAGGAAAGCTGTAACAATATCTTGATAAATGATCATA 1551
consensus_11260#2      ------------------------------------------------------------
consensus_11260#1      ------------------------------------------------------------
                                                                                   

consensus_11260#0      TACACATTAACAAATTTAATAAAGTACAAAGAAAATATTTTTTGTTAAAAAAAAAAAGA 1610
consensus_11260#2      -----------------------------------------------------------
consensus_11260#1      -----------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)