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Oryza sativa
cluster # 11262 cluster # 11262       Sequences # 8       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11262#0 length = 3116 sequences # 6  
 consensus_11262#1 length = 590 sequences # 1  
consensus_11262#2 length = 171 sequences # 1  
consensusID : consensus_11262#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3116
fasta sequence 
                              [AGTTCAGTCACCAACCCACCAAACCCCACCGCGACCGCGACTCCGACGTCTCCGCCACGGGCCAAAGTCGAAAAATCGAGGGGACTTTCCCATCTCCATCCCGCGGCGGGCGCACGGGTTGGTCGGTTGGTCCGTCCGTGGCGTGGACTCGAAGCCGCCTCGTCTTCCTCCTCCTCCTCCTCCCCCCTCCGGCAGTGGCCCAGGAGGGCGCCCGCGGCTACTGCTGCTTCCGCTCAAAGCTTCAAGTTCCCGTGCGCTTCTGCTTCCCCACTACCTCCCGCTGGTCTCGGTGCCCACTGCGCAGCGCGGTGCTTCATCTCCCTCTCGCTCCGGGGCTGGCTGCAGCCACAAGCTAGCGGCAGCGGAGGACTCGCTTCCGACGAGCTCGGTGTGGTGTGGAGGTGGTGTCTGGCTTGGCTGGTTGGTTTGCTGGACGTAAAGCACATTCCTATTTGGGTTGCGTTGCTTCTTTAGGTCAGAGGACACTCCAAACTGCCGCAAAGTTTCACTGATACAGCTCTTTGTCTTCATAAAGGGATTATCATACACCTTAACACTTTAATAGATCAGGATGACAGTTGAGCTGGAATTGATTTAACTTGCTTGCTTGGATGGTTTGTGTTCTGAATTTGGAATTTCATGGTTATGGGTACTTTAGGATGAACACATATTGATTTTAGACATCGGACCAACTTGCTAAAACAGTTCTGAGTGATGAAGAAATGGCACGGTGGTTTTGTCATAGTATCTTTGTTCATTATATTGATGCTAAGATATGTTATATTGGATAGTCCACTTGCTGAAAAATCTCTTCAGTATGTCTTCCAACAGAATAACACAACCCCACTACATTGGCTGGATGTTCCAAACCCGCCTGCAGTTCAGAATCCACAGAACATCTCTCAAGTAATATCAACTGAATTGTTAGCTTCAAACCTTTCCATAACAAGAAATTTCTCCGATAGAGAACTGCAGTCATTGCATTCTTGGAATCATTTAAAAGACCTAGTAAGTCATGCGCACATCTTACCAGATGGAGTAGAAGCAATCAAGGAAGCTGGAGTAGCATGGAGGGAGCTAAATGCAGCCCTTGAATACGATGAATCTGCTGTTTCTGTCAATGGTAGCACTCATCAAAAAAGTAAAGAGAAGCAATGCCCATATTCCATTCGAAGAATGAATGCTACAAGATCAGGTGATAGATTTGTCTTAAAGATTCCTTGTGGACTGATTCAGGGCTCTTCAATAACTATTATCGGTACTCCTGGTGGTCTTCTTGGTAGTTTTAAGATAGAATTAACTGGGGCTACTGTACCTGGTGAACCAGACCCTCCAATTGTGCTTCATTACAATGTCCGTCTTCTTGGTGATAAACTTACAGAAGATCCTGTAATAGTCCAAAATACATGGACTATAGCTGACGACTGGGGTTCTGAAGATCGTTGCCCATCTCCTGGTTCAGATGCTAAGGACATTGCAAAAGTGGATGAGTTAGAAAAATGCGGTAGCATGGTGGGCAATGATCAAAAACAAGCATGGGCCACTAAGTTAAAGTCCAATGTTTCAAGCATACAACCTGCCTGGAAAAAGAACACAGAACCTAAGAAATATTTTCCCTTCAGACAAGGATATCTTGCTATAGCAATTCTTCGTGTTGGAGCACATGGGATCCATATGACTGTAGATGGGAAACATGTCACTTCATTTGCCTTTCGGGAGGATTTGGAGCCTGGATTTGTTGGTGAAGTAAGAATTGCAGGAGATATTAAATTGTTGTCTGTGATAGCAAGTGGTTTGCCTACAACAGAGGAC-TTTGAACATGTGACTGACTTAGAAATTTTGAAGGCTCCACCAGTTCCCATGGACAAACCCCTGGATCTTTTTATTGGGATCTTTTCTACAGCTAACAATTTCAAGCGCAGAATGGCAGTTCGCAGAACTTGGATGCAGTATGATGCTGTCCGCTCAGGAAAGGCTGCAGTTCGATTCTTTGTTGGCCTGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAAGCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACTATAGCGATCTGCATCTATGGGACAAACGTCTTGTCAGCCAAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCGCGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGAATGGCCTGAGGAGAGTTATCCTCCATGGGCACATGGTCCGGGATACATTGTATCACAAGACATAGCAAAAGAAGTTTACAGGAAACACAAGAGAGGAGAACTTAAGATGTTCAAACTAGAAGATGTCGCAATGGGAATATGGATCAATGAGATGAAGAAGGATGGGTTGGATGTAAAGTATGAAAATGATGGGAGGATTTTGG-TCGAAGGCTG-TGAGGAAGGATATGTGGTTGCACATTACCAGGAGCCAAGGGACATGATGTGCCTATGGGACAAATTTCTGAAAACAAAACGAGGAACATGTTGCAAGGAGTAACGGGGGAGTAACAGGACTAATCCGACCATATATTTTGATGGCTACTGTATAGCCATGGCCTGCTGACACCAACGACAAGCTCGGCACAACGCCACAACCCCATGCAAGAGGAGCAGGCAACAAAGTTTTAACCTTGCTTATTTTTGGTGGTTGCAGAATCAATAGGCAACGAAGTTTTGAATATCATTCACAGTCATTTTTGTCCGCGGGGAAAGAGATTGAAGTCTCACCACCATATTTTGTAGAAGATGTAGGTTTCCTATTTGGGCATATAGGTAGGGAGGTGTTGCTTAGTTGCTTGCAGTGTGGCTTCTTGTAACATATCTTTCTAGAAAAACGTAGGATACACCGGCAATTACACTTTTAGGGTAGATGCAGAGGCAGTATTACCATTCTTTTCCTAGGAATGCATCCTGTATCTGATGTAAAGCTATTTGACAACTACTCATTGTACAATCCACTTCCTATCCACGGCATACCTGAACTTT]

[+] EMBL AK070606             [AGTTCAGTCACCAACCCACCAAACCCCACCGCGACCGCGACTCCGACGTCTCCGCCACGGGCCAAAGTCGAAAAATCGAGGGGACTTTCCCATCTCCATCCCGCGGCGGGCGCACGGGTTGGTCGGTTGGTCCGTCCGTGGCGTGGACTCGAAGCCGCCTCGTCTTCCTCCTCCTCCTCCTCCCCCCTCCGGCAGTGGCCCAGGAGGGCGCCCGCGGCTACTGCTGCTTCCGCTCAAAGCTTCAAGTTCCCGTGCGCTTCTGCTTCCCCACTACCTCCCGCTGGTCTCGGTGCCCACTGCGCAGCGCGGTGCTTCATCTCCCTCTCGCTCCGGGGCTGGCTGCAGCCACAAGCTAGCGGCAGCGGAGGACTCGCTTCCGACGAGCTCGGTGTGGTGTGGAGGTGGTGTCTGGCTTGGCTGGTTGGTTTGCTGGACGTAAAGCACATTCCTATTTGGGTTGCGTTGCTTCTTTAGGTCAGAGGACACTCCAAACTGCCGCAAAGTTTCACTGATACAGCTCTTTGTCTTCATAAAGGGATTATCATACACCTTAACACTTTAATAGATCAGGATGACAGTTGAGCTGGAATTGATTTAACTTGCTTGCTTGGATGGTTTGTGTTCTGAATTTGGAATTTCATGGTTATGGGTACTTTAGGATGAACACATATTGATTTTAGACATCGGACCAACTTGCTAAAACAGTTCTGAGTGATGAAGAAATGGCACGGTGGTTTTGTCATAGTATCTTTGTTCATTATATTGATGCTAAGATATGTTATATTGGATAGTCCACTTGCTGAAAAATCTCTTCAGTATGTCTTCCAACAGAATAACACAACCCCACTACATTGGCTGGATGTTCCAAACCCGCCTGCAGTTCAGAATCCACAGAACATCTCTCAAGTAATATCAACTGAATTGTTAGCTTCAAACCTTTCCATAACAAGAAATTTCTCCGATAGAGAACTGCAGTCATTGCATTCTTGGAATCATTTAAAAGACCTAGTAAGTCATGCGCACATCTTACCAGATGGAGTAGAAGCAATCAAGGAAGCTGGAGTAGCATGGAGGGAGCTAAATGCAGCCCTTGAATACGATGAATCTGCTGTTTCTGTCAATGGTAGCACTCATCAAAAAAGTAAAGAGAAGCAATGCCCATATTCCATTCGAAGAATGAATGCTACAAGATCAGGTGATAGATTTGTCTTAAAGATTCCTTGTGGACTGATTCAGGGCTCTTCAATAACTATTATCGGTACTCCTGGTGGTCTTCTTGGTAGTTTTAAGATAGAATTAACTGGGGCTACTGTACCTGGTGAACCAGACCCTCCAATTGTGCTTCATTACAATGTCCGTCTTCTTGGTGATAAACTTACAGAAGATCCTGTAATAGTCCAAAATACATGGACTATAGCTGACGACTGGGGTTCTGAAGATCGTTGCCCATCTCCTGGTTCAGATGCTAAGGACATTGCAAAAGTGGATGAGTTAGAAAAATGCGGTAGCATGGTGGGCAATGATCAAAAACAAGCATGGGCCACTAAGTTAAAGTCCAATGTTTCAAGCATACAACCTGCCTGGAAAAAGAACACAGAACCTAAGAAATATTTTCCCTTCAGACAAGGATATCTTGCTATAGCAATTCTTCGTGTTGGAGCACATGGGATCCATATGACTGTAGATGGGAAACATGTCACTTCATTTGCCTTTCGGGAGGATTTGGAGCCTGGATTTGTTGGTGAAGTAAGAATTGCAGGAGATATTAAATTGTTGTCTGTGATAGCAAGTGGTTTGCCTACAACAGAGGAC TTTGAACATGTGACTGACTTAGAAATTTTGAAGGCTCCACCAGTTCCCATGGACAAACCCCTGGATCTTTTTATTGGGATCTTTTCTACAGCTAACAATTTCAAGCGCAGAATGGCAGTTCGCAGAACTTGGATGCAGTATGATGCTGTCCGCTCAGGAAAGGCTGCAGTTCGATTCTTTGTTGGCCTGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAAGCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACTATAGCGATCTGCATCTATGGGACAAACGTCTTGTCAGCCAAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGAT  CGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGAATGGCCTGAGGAGAGTTATCCTCCATGGGCACATGGTCCGGGATACATTGTATCACAAGACATAGCAAAAGAAGTTTACAGGAAACACAAGAGAGGAGAACTTAAGATGTTCAAACTAGAAGATGTCGCAATGGGAATATGGATCAATGAGATGAAGAAGGATGGGTTGGATGTAAAGTATGAAAATGATGGGAGGATTTTGG TCGAAGGCTG TGAGGAAGGATATGTGGTTGCACATTACCAGGAGCCAAGGGACATGATGTGCCTATGGGACAAATTTCTGAAAACAAAACGAGGAACATGTTGCAAGGAGTAACGGGGGAGTAACAGGACTAATCCGACCATATATTTTGATGGCTACTGTATAGCCATGGCCTGCTGACACCAACGACAAGCTCGGCACAACGCCACAACCCCATGCAAGAGGAGCAGGCAACAAAGTTTTAACCTTGCTTATTTTTGGTGGTTGCAGAATCAATAGGCAACGAAGTTTTGAATATCATTCACAGTCATTTTTGTCCGCGGGGAAAGAGATTGAAGTCTCACCACCATATTTTGTAGAAGATGTAGGTTTCCTATTTGGGCATATAGGTAGGGAGGTGTTGCTTAGTTGCTTGCAGTGTGGCTTCTTGTAACATATCTTTCTAGAAAAACGTAGGATACACCGGCAATTACACTTTTAGGGTAGATGCAGAGGCAGTATTACCATTCTTTTCCTAGGAATGCATCCTGTATCTGATGTAAAGCTATTTGACAACTACTCATTGTACAATCCACTTCCTATCCACGGCATACCTGAACTT ]
[+] EMBL OSAA31732            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAAATTGTTGTCTGTGATAGCAAGTGGTTTGCCTACAACAGAGGAC TTTGAACATGTGACTGACTTAGAAATTTTGAAGGCTCCATCAGTTCCCATGGACAAACCCCTGGATCTTTTTATTGGGATCTTTCCTACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL D43464               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    tgCTATCACAGACAACAATTTAATATGTGACTGACTTAGAAATTTTGAAGGCTCCACCAGTTCCCATGGACAAACCCCTGGTTCTTTTTATTGGGATCTTTTCTACAGCTAACAATTTCAAGCGCAGAATGGCAGTTCGCAG ACTTGGATGCAGTATGATGCTGTCCGCTCAGGAAAGGCTGCAGTTCGATTCTTTGTTGGCCTGCATAAAAATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA999734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        aggAAACCCCTGGATCTTTTTATTGGGATCTTTTCTACAGCTAACAATTTCAAGCGCAGAATGGCAGTTCGCAGAACTTGGATGCAGTATGATGCTGTCCGCTCAGGAAAGGCTGCAGTTCGATTCTTTGTTGGCCTGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAAGCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACTATAGCCATCTGCATCTATGGGACAAACGTCTTGTCAGCCAAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCGCGTGAACATCAGTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA753672             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCGCGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGAATGGCCTGAGGAGAGTTATCCTCCATGGGCACATGGTCCGGGATACATTGTATCACAAGACATAGCAAGAGAAGTTTACAGGAAACACAAGAGAGGAGAACTTAAGATGTTCAAACTAGAAGATGCCCCAATTGGAATATGGATCAATGAGATGAAGAAGGATGGGTTGGATGTAAAGTATGAAAATGATGGGAGGATTTTGGTTCGAAGGCTGTTGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL OSAA31777            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATACACCGGCAATTACACTTTTAGGGTAGATGCAGAGGCAGTATTACCATTCTTTTCCTAGGAATGCATCCTGTATCTGATGTAAAGCTATTTGACAACTACTCATTGTACAATCCACTTCCTATCCACGGCATACCTGAACTTT]




>consensus_11262#0
AGTTCAGTCACCAACCCACCAAACCCCACCGCGACCGCGACTCCGACGTCTCCGCCACGG
GCCAAAGTCGAAAAATCGAGGGGACTTTCCCATCTCCATCCCGCGGCGGGCGCACGGGTT
GGTCGGTTGGTCCGTCCGTGGCGTGGACTCGAAGCCGCCTCGTCTTCCTCCTCCTCCTCC
TCCCCCCTCCGGCAGTGGCCCAGGAGGGCGCCCGCGGCTACTGCTGCTTCCGCTCAAAGC
TTCAAGTTCCCGTGCGCTTCTGCTTCCCCACTACCTCCCGCTGGTCTCGGTGCCCACTGC
GCAGCGCGGTGCTTCATCTCCCTCTCGCTCCGGGGCTGGCTGCAGCCACAAGCTAGCGGC
AGCGGAGGACTCGCTTCCGACGAGCTCGGTGTGGTGTGGAGGTGGTGTCTGGCTTGGCTG
GTTGGTTTGCTGGACGTAAAGCACATTCCTATTTGGGTTGCGTTGCTTCTTTAGGTCAGA
GGACACTCCAAACTGCCGCAAAGTTTCACTGATACAGCTCTTTGTCTTCATAAAGGGATT
ATCATACACCTTAACACTTTAATAGATCAGGATGACAGTTGAGCTGGAATTGATTTAACT
TGCTTGCTTGGATGGTTTGTGTTCTGAATTTGGAATTTCATGGTTATGGGTACTTTAGGA
TGAACACATATTGATTTTAGACATCGGACCAACTTGCTAAAACAGTTCTGAGTGATGAAG
AAATGGCACGGTGGTTTTGTCATAGTATCTTTGTTCATTATATTGATGCTAAGATATGTT
ATATTGGATAGTCCACTTGCTGAAAAATCTCTTCAGTATGTCTTCCAACAGAATAACACA
ACCCCACTACATTGGCTGGATGTTCCAAACCCGCCTGCAGTTCAGAATCCACAGAACATC
TCTCAAGTAATATCAACTGAATTGTTAGCTTCAAACCTTTCCATAACAAGAAATTTCTCC
GATAGAGAACTGCAGTCATTGCATTCTTGGAATCATTTAAAAGACCTAGTAAGTCATGCG
CACATCTTACCAGATGGAGTAGAAGCAATCAAGGAAGCTGGAGTAGCATGGAGGGAGCTA
AATGCAGCCCTTGAATACGATGAATCTGCTGTTTCTGTCAATGGTAGCACTCATCAAAAA
AGTAAAGAGAAGCAATGCCCATATTCCATTCGAAGAATGAATGCTACAAGATCAGGTGAT
AGATTTGTCTTAAAGATTCCTTGTGGACTGATTCAGGGCTCTTCAATAACTATTATCGGT
ACTCCTGGTGGTCTTCTTGGTAGTTTTAAGATAGAATTAACTGGGGCTACTGTACCTGGT
GAACCAGACCCTCCAATTGTGCTTCATTACAATGTCCGTCTTCTTGGTGATAAACTTACA
GAAGATCCTGTAATAGTCCAAAATACATGGACTATAGCTGACGACTGGGGTTCTGAAGAT
CGTTGCCCATCTCCTGGTTCAGATGCTAAGGACATTGCAAAAGTGGATGAGTTAGAAAAA
TGCGGTAGCATGGTGGGCAATGATCAAAAACAAGCATGGGCCACTAAGTTAAAGTCCAAT
GTTTCAAGCATACAACCTGCCTGGAAAAAGAACACAGAACCTAAGAAATATTTTCCCTTC
AGACAAGGATATCTTGCTATAGCAATTCTTCGTGTTGGAGCACATGGGATCCATATGACT
GTAGATGGGAAACATGTCACTTCATTTGCCTTTCGGGAGGATTTGGAGCCTGGATTTGTT
GGTGAAGTAAGAATTGCAGGAGATATTAAATTGTTGTCTGTGATAGCAAGTGGTTTGCCT
ACAACAGAGGACTTTGAACATGTGACTGACTTAGAAATTTTGAAGGCTCCACCAGTTCCC
ATGGACAAACCCCTGGATCTTTTTATTGGGATCTTTTCTACAGCTAACAATTTCAAGCGC
AGAATGGCAGTTCGCAGAACTTGGATGCAGTATGATGCTGTCCGCTCAGGAAAGGCTGCA
GTTCGATTCTTTGTTGGCCTGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAA
GCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTA
TGGAAGACTATAGCGATCTGCATCTATGGGACAAACGTCTTGTCAGCCAAGTATGTGATG
AAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCGCGTG
AACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCGAGAC
CCATATAGCAAGTGGTACATAACCCCAGAGGAATGGCCTGAGGAGAGTTATCCTCCATGG
GCACATGGTCCGGGATACATTGTATCACAAGACATAGCAAAAGAAGTTTACAGGAAACAC
AAGAGAGGAGAACTTAAGATGTTCAAACTAGAAGATGTCGCAATGGGAATATGGATCAAT
GAGATGAAGAAGGATGGGTTGGATGTAAAGTATGAAAATGATGGGAGGATTTTGGTCGAA
GGCTGTGAGGAAGGATATGTGGTTGCACATTACCAGGAGCCAAGGGACATGATGTGCCTA
TGGGACAAATTTCTGAAAACAAAACGAGGAACATGTTGCAAGGAGTAACGGGGGAGTAAC
AGGACTAATCCGACCATATATTTTGATGGCTACTGTATAGCCATGGCCTGCTGACACCAA
CGACAAGCTCGGCACAACGCCACAACCCCATGCAAGAGGAGCAGGCAACAAAGTTTTAAC
CTTGCTTATTTTTGGTGGTTGCAGAATCAATAGGCAACGAAGTTTTGAATATCATTCACA
GTCATTTTTGTCCGCGGGGAAAGAGATTGAAGTCTCACCACCATATTTTGTAGAAGATGT
AGGTTTCCTATTTGGGCATATAGGTAGGGAGGTGTTGCTTAGTTGCTTGCAGTGTGGCTT
CTTGTAACATATCTTTCTAGAAAAACGTAGGATACACCGGCAATTACACTTTTAGGGTAG
ATGCAGAGGCAGTATTACCATTCTTTTCCTAGGAATGCATCCTGTATCTGATGTAAAGCT
ATTTGACAACTACTCATTGTACAATCCACTTCCTATCCACGGCATACCTGAACTTT

consensusID : consensus_11262#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence 
                              [TTGTGTATTGCTACCTATCAGTAGAATGTACCGATGTATCATGACTATTGTCTCGAACAATACTGTAAAAAAAATTCATTTTTACTCTTATTGTTCCCTTTTTTTGCCGGCACCAGTTGTGCTAGTTTGAATTAGGGTACCCTTCTTCAGAGTTAACACATCTACCCCTTTTCCTGCCATTGTTAAAAGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAAGCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACTATAGCCATCTGCATCTATGGGGTATGTAGTTACTTTTTTTTTGTATGTATTTTTTGAAATATTTTGCATCTAATTCAGCTTAAATTTTTCCTCTTAGACAAACGTCTTGTCAGCCAAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCGCGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGTAGTTGATTTAATCC]

[+] EMBL CF305801             [TTGTGTATTGCTACCTATCAGTAGAATGTACCGATGTATCATGACTATTGTCTCGAACAATACTGTAAAAAAAATTCATTTTTACTCTTATTGTTCCCTTTTTTTGCCGGCACCAGTTGTGCTAGTTTGAATTAGGGTACCCTTCTTCAGAGTTAACACATCTACCCCTTTTCCTGCCATTGTTAAAAGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAAGCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACTATAGCCATCTGCATCTATGGGGTATGTAGTTACTTTTTTTTTGTATGTATTTTTTGAAATATTTTGCATCTAATTCAGCTTAAATTTTTCCTCTTAGACAAACGTCTTGTCAGCCAAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCGCGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGTAGTTGATTTAATCC]




>consensus_11262#1
TTGTGTATTGCTACCTATCAGTAGAATGTACCGATGTATCATGACTATTGTCTCGAACAA
TACTGTAAAAAAAATTCATTTTTACTCTTATTGTTCCCTTTTTTTGCCGGCACCAGTTGT
GCTAGTTTGAATTAGGGTACCCTTCTTCAGAGTTAACACATCTACCCCTTTTCCTGCCAT
TGTTAAAAGCATAAAAATGAGGTGGTGAATGAGGAACTTTGGAATGAAGCACGAACATAT
GGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACTATA
GCCATCTGCATCTATGGGGTATGTAGTTACTTTTTTTTTGTATGTATTTTTTGAAATATT
TTGCATCTAATTCAGCTTAAATTTTTCCTCTTAGACAAACGTCTTGTCAGCCAAGTATGT
GATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCTTTAGATCG
CGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAGCCTCATCG
AGACCCATATAGCAAGTGGTACATAACCCCAGAGGTAGTTGATTTAATCC

consensusID : consensus_11262#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 171
fasta sequence 
                              [TGCNATCACAGACAACANTTTANTATGTNACTGANTTAGAAATTTTAANGGCTCCACCAGTNCCCATGGACAAACCCCTGGNTCTTTTNATNGGGATCTTTTCTACAGCTAACAATTTCAAGCGCAGAATGGCAGTNCGCAGANTNGGATGCAGTATGANGNTGTCCGCNC]

[+] EMBL D43518               [TGCNATCACAGACAACANTTTANTATGTNACTGANTTAGAAATTTTAANGGCTCCACCAGTNCCCATGGACAAACCCCTGGNTCTTTTNATNGGGATCTTTTCTACAGCTAACAATTTCAAGCGCAGAATGGCAGTNCGCAGANTNGGATGCAGTATGANGNTGTCCGCNC]




>consensus_11262#2
TGCNATCACAGACAACANTTTANTATGTNACTGANTTAGAAATTTTAANGGCTCCACCAG
TNCCCATGGACAAACCCCTGGNTCTTTTNATNGGGATCTTTTCTACAGCTAACAATTTCA
AGCGCAGAATGGCAGTNCGCAGANTNGGATGCAGTATGANGNTGTCCGCNC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11262#0      AGTTCAGTCACCAACCCACCAAACCCCACCGCGACCGCGACTCCGACGTCTCCGCCACGG 60
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GCCAAAGTCGAAAAATCGAGGGGACTTTCCCATCTCCATCCCGCGGCGGGCGCACGGGTT 120
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GGTCGGTTGGTCCGTCCGTGGCGTGGACTCGAAGCCGCCTCGTCTTCCTCCTCCTCCTCC 180
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TCCCCCCTCCGGCAGTGGCCCAGGAGGGCGCCCGCGGCTACTGCTGCTTCCGCTCAAAGC 240
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TTCAAGTTCCCGTGCGCTTCTGCTTCCCCACTACCTCCCGCTGGTCTCGGTGCCCACTGC 300
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GCAGCGCGGTGCTTCATCTCCCTCTCGCTCCGGGGCTGGCTGCAGCCACAAGCTAGCGGC 360
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      AGCGGAGGACTCGCTTCCGACGAGCTCGGTGTGGTGTGGAGGTGGTGTCTGGCTTGGCTG 420
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GTTGGTTTGCTGGACGTAAAGCACATTCCTATTTGGGTTGCGTTGCTTCTTTAGGTCAGA 480
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GGACACTCCAAACTGCCGCAAAGTTTCACTGATACAGCTCTTTGTCTTCATAAAGGGATT 540
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ATCATACACCTTAACACTTTAATAGATCAGGATGACAGTTGAGCTGGAATTGATTTAACT 600
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGCTTGCTTGGATGGTTTGTGTTCTGAATTTGGAATTTCATGGTTATGGGTACTTTAGGA 660
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGAACACATATTGATTTTAGACATCGGACCAACTTGCTAAAACAGTTCTGAGTGATGAAG 720
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      AAATGGCACGGTGGTTTTGTCATAGTATCTTTGTTCATTATATTGATGCTAAGATATGTT 780
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ATATTGGATAGTCCACTTGCTGAAAAATCTCTTCAGTATGTCTTCCAACAGAATAACACA 840
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ACCCCACTACATTGGCTGGATGTTCCAAACCCGCCTGCAGTTCAGAATCCACAGAACATC 900
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TCTCAAGTAATATCAACTGAATTGTTAGCTTCAAACCTTTCCATAACAAGAAATTTCTCC 960
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GATAGAGAACTGCAGTCATTGCATTCTTGGAATCATTTAAAAGACCTAGTAAGTCATGCG 1020
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      CACATCTTACCAGATGGAGTAGAAGCAATCAAGGAAGCTGGAGTAGCATGGAGGGAGCTA 1080
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      AATGCAGCCCTTGAATACGATGAATCTGCTGTTTCTGTCAATGGTAGCACTCATCAAAAA 1140
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      AGTAAAGAGAAGCAATGCCCATATTCCATTCGAAGAATGAATGCTACAAGATCAGGTGAT 1200
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      AGATTTGTCTTAAAGATTCCTTGTGGACTGATTCAGGGCTCTTCAATAACTATTATCGGT 1260
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ACTCCTGGTGGTCTTCTTGGTAGTTTTAAGATAGAATTAACTGGGGCTACTGTACCTGGT 1320
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GAACCAGACCCTCCAATTGTGCTTCATTACAATGTCCGTCTTCTTGGTGATAAACTTACA 1380
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GAAGATCCTGTAATAGTCCAAAATACATGGACTATAGCTGACGACTGGGGTTCTGAAGAT 1440
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      CGTTGCCCATCTCCTGGTTCAGATGCTAAGGACATTGCAAAAGTGGATGAGTTAGAAAAA 1500
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGCGGTAGCATGGTGGGCAATGATCAAAAACAAGCATGGGCCACTAAGTTAAAGTCCAAT 1560
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GTTTCAAGCATACAACCTGCCTGGAAAAAGAACACAGAACCTAAGAAATATTTTCCCTTC 1620
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      AGACAAGGATATCTTGCTATAGCAATTCTTCGTGTTGGAGCACATGGGATCCATATGACT 1680
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GTAGATGGGAAACATGTCACTTCATTTGCCTTTCGGGAGGATTTGGAGCCTGGATTTGTT 1740
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GGTGAAGTAAGAATTGCAGGAGATATTAAATTGTTGTCTGTGATAGCAAGTGGTTTGCCT 1800
consensus_11262#2      -------------------------------------------------------TGCN- 4
consensus_11262#1      --TTGTGTATTGCTACCTATCAGTAGAATGTACCGATGTATCATGACTATTGTCTCGAAC 58
                                                                               *   

consensus_11262#0      ACAACAG--AGGAC-TTTGAACATGTGACTGACTTAGAAATTTTGAAGGCTCCACCAGTT 1857
consensus_11262#2      ATCACAG--ACAACANTTTANTATGTNACTGANTTAGAAATTTTAANGGCTCCACCAGTN 62
consensus_11262#1      AATACTGTAAAAAAAATTCATTTTTACTCTTATTGTTCCCTTTTTTTGCCGGCACCAGTT 118
                       *  ** *  *  *   ** *   *    ** * *      ****   * *  ******* 

consensus_11262#0      CCCATGGACAAACCCCTGGATCTTTTTATTGGGAT---CTTTTCTACAGCT------AAC 1908
consensus_11262#2      CCCATGGACAAACCCCTGGNTCTTTTNATNGGGAT---CTTTTCTACAGCT------AAC 113
consensus_11262#1      GTGCTAGTTTGAATTAGGGTACCCTTCTTCAGAGTTAACACATCTACCCCTTTTCCTGCC 178
                           * *    *     **  *  **  *  *  *   *   *****  **        *

consensus_11262#0      AATTTCAAGCGCAGAATGGCAGTTCGCAGAACTTGGATGCAGTATGATGCTGTCCGCTCA 1968
consensus_11262#2      AATTTCAAGCGCAGAATGGCAGTNCGCAGAN-TNGGATGCAGTATGANGNTGTCCGCNC- 171
consensus_11262#1      ATTGTTAAAAGCATAAAAATGAGGTGGTGAA-TGAGGAACTTTGGAATGAAGCACGAACA 237
                       * * * **  *** **         *  **  *  *   *  *   * *  *  **  * 

consensus_11262#0      GGAAAGGCTGCAGTTCGATTCTTTGTTGGCCTGCATAAAAATGAGGTGGTGAATGAGGAA 2028
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      TATGGAGACATCCAATTGATGCCCTTTGTTGATTATTATAGCCTGATTCTATGGAAGACT 297
                                                                                   

consensus_11262#0      CTTTGGAATGAAGCACGAACATATGGAGACATCCAATTGATGCCCTTTGTTGATTATTAT 2088
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ATAGCCATCTGCATCTATGGGGTATGTAGTTACTTTTTTTTTGTATGTATTTTTTGAAAT 357
                                                                                   

consensus_11262#0      AGCCTGATTCTATGGAAGACTATAGCGATCTGCATCTATGGGACAAACGTCTTGTCAGCC 2148
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ATTTTGCATCTAATTCAGCTTAAATTTTTC-----CTCTTAGACAAACGTCTTGTCAGCC 412
                                                                                   

consensus_11262#0      AAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCT 2208
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      AAGTATGTGATGAAAACAGATGATGATGCTTTTGTCCGTGTGGATGAGATACTTTTATCT 472
                                                                                   

consensus_11262#0      TTAGATCGCGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAG 2268
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      TTAGATCGCGTGAACATCAGTCATGGGTTACTGTACGGTCGTGTCAATTCTGATTCTCAG 532
                                                                                   

consensus_11262#0      CCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGAATGGCCTGAGGAGAGT 2328
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      CCTCATCGAGACCCATATAGCAAGTGGTACATAACCCCAGAGGTAGTTGATTTAATCC-- 590
                                                                                   

consensus_11262#0      TATCCTCCATGGGCACATGGTCCGGGATACATTGTATCACAAGACATAGCAAAAGAAGTT 2388
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TACAGGAAACACAAGAGAGGAGAACTTAAGATGTTCAAACTAGAAGATGTCGCAATGGGA 2448
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ATATGGATCAATGAGATGAAGAAGGATGGGTTGGATGTAAAGTATGAAAATGATGGGAGG 2508
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ATTTTGGTCGAAGGCTGTGAGGAAGGATATGTGGTTGCACATTACCAGGAGCCAAGGGAC 2568
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ATGATGTGCCTATGGGACAAATTTCTGAAAACAAAACGAGGAACATGTTGCAAGGAGTAA 2628
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      CGGGGGAGTAACAGGACTAATCCGACCATATATTTTGATGGCTACTGTATAGCCATGGCC 2688
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGCTGACACCAACGACAAGCTCGGCACAACGCCACAACCCCATGCAAGAGGAGCAGGCAA 2748
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      CAAAGTTTTAACCTTGCTTATTTTTGGTGGTTGCAGAATCAATAGGCAACGAAGTTTTGA 2808
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      ATATCATTCACAGTCATTTTTGTCCGCGGGGAAAGAGATTGAAGTCTCACCACCATATTT 2868
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGTAGAAGATGTAGGTTTCCTATTTGGGCATATAGGTAGGGAGGTGTTGCTTAGTTGCTT 2928
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      GCAGTGTGGCTTCTTGTAACATATCTTTCTAGAAAAACGTAGGATACACCGGCAATTACA 2988
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      CTTTTAGGGTAGATGCAGAGGCAGTATTACCATTCTTTTCCTAGGAATGCATCCTGTATC 3048
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGATGTAAAGCTATTTGACAACTACTCATTGTACAATCCACTTCCTATCCACGGCATACC 3108
consensus_11262#2      ------------------------------------------------------------
consensus_11262#1      ------------------------------------------------------------
                                                                                   

consensus_11262#0      TGAACTTT 3116
consensus_11262#2      --------
consensus_11262#1      --------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)