cluster # 11275

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Oryza sativa
cluster # 11275 cluster # 11275 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11275#0 length = 1396 sequences # 8
consensusID : consensus_11275#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1396
fasta sequence
                              [AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC-GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT-GACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCCTAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTATGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACAAGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATCGGCCAAGATCAATTCCTTTGATAAGCGTGTTGG-AATTTCAGA-GAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT-CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK061165             [AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT GACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCCTAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTATGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACAAGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATCGGCCAAGATCAATTCCTTTGATAAGCGTGTTGG AATTTCAGA GAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAtgtt             ]
[+] EMBL CF276901             [    AGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCA ATGCGATGGGG GGCGAC GGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATCGGGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF298683             [                                                     AACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT GACCAGCAACTTGTGGTCAGTGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C26286               [                                                                            GCCTCTCGAGCACCAAACCCTACCCGGTTCGCNAGCGCA NCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTNTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCANATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCNATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGNTCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C28004               [                                                                                                                                                                                 TCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCANATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCNATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACTNGACCAGCAACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU092795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gAACATCAATTGAGGNCAAATGCATCGCCCAAGATCAATCCNTTTGATAAGCGTGTTGGAAATTTCAGAGGAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTNCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAA       ]
[+] EMBL AU100686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATNTTGCTGGCTCCAAGAACAAGAGAGAAGTTCCAAATAGCTGTGNCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCNCCTTCACTCAGAGTGTANCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTNCGGGGAGGTTTTTCCAGTGAGCCATGTCNGATTTNGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGNCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGNTATTCTGGGCCATATGTTGTTGANTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAA    ]
[-] EMBL CF276902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCCCCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATTTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAAAAAA]




>consensus_11275#0
AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAA
CCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCAC
TCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCT
GCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAG
GACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTT
CTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAG
GACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGG
AGCAACAATTGTGGATCGGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCC
TGTTACTGACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCC
TAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTA
TGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACA
AGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATC
GGCCAAGATCAATTCCTTTGATAAGCGTGTTGGAATTTCAGAGAAGATAAACAGCGGGAT
AACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAAC
AATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAAC
CAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAA
GGCTGGTCATGTTGCTGGCTCAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCT
AACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCT
TCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTAT
CGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTT
TCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGT
CGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTG
GGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAA
AAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case