Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11300 cluster # 11300       Sequences # 8       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11300#0 length = 2978 sequences # 3  
consensus_11300#1 length = 2109 sequences # 2  
 consensus_11300#2 length = 580 sequences # 2  
consensus_11300#3 length = 191 sequences # 1  
consensusID : consensus_11300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2978
fasta sequence 
                              [GCATATTAGATGTTCAGCAAAATAGCTGTAGCGTGTGTATGAGGCTGGCGGATGAATGTGATAGCCGGACTTTATTTGGTCAGTTTGCTCAATCGGGATAACCTTGGAGTTGCTTCCTAGATCACAGCACTTCAATCTGATAGAGAATTTCCATGTCTCAAAACCATGAGACATCCTTTACAAGCAAATAGTTATTTCATATGACAGCCATCGAATGCGCTACTGATGTTTCAAAATCAAGCCGGTTGATGCCTGTGCCTCTGTGGGGGTTGGGTTTCAACAATTGCTTTGAAAAAAAATGTGTTATGCAGCGATGATAATTTGATTGTGTGAATTAACAGCACAAGACCTTTTTCATGTTATTTCTAGAACAGAATTTTGACTCTTTTGGGAAATGCATATGCTTGCAATTTATCCTTCTGGACAAAGCATTCTTAAGTACCATATATTTCATTTGCTTGCTGGATCATGAGGTTTGAGTTCACTTTGAGATATTTGATGAGATGAAACCCAATAGAACATGGCATGCTGTATATAAGGAAGAGTCCTACATATATCTTACATAATTGAATTATTGCTAATGGCATCCTTTTTATCTTGTAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCCAGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAGAGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGCACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTTACATTGTTCTGTAGATTCTTTGTTTTGGTTTTAGAGCATGGAACGTATGTGATTTAAAAATGTTTTTATATTTATCTATGTATTCATAGGGTACAATATGAACACTGTGCTATATTGCTAGCTTTCCACTCTAGGAACTATGCACAAAGAAAGAGGACTTACCTGATGAACTTGTAAATGTGCTTATTGTGAGAATAAGTAGTGATATTTAATAAACTTTTGGCAGTTTAAAAAGTTAATGCAGGGAAACTATTTGTTTGTCCTGACATTTTGCGGGCGTTAATATTCATTATGAATATCTGTTGTGGCTTGCCTTACGTCTTCTCTCGTGCTGCTATTGGTCCATTAGTTGGTTTGGAGAGTGGACGATTAATTACTATCTAAGATTTCTGAACATTTGGAACTGAAACTTTTCATATAAGAATCTATCATGGCTCAGCTTGTAATAAGGATGGTCTGGGTTGAAATTGCGCAACTGGCAGTCTCAGACAAAAATTACTTCCCTCATTTTTAATGCATTTTGTACCTTGCAGTTTGAAGTACATCAATGTTGCAATGCTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATACTTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGCAATTGCAGGAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAACTGCTTTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCACCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTACCACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACGCCTCTCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTATCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGTCTTGTGGGCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGAGCATGGAGAATTCTTTCAGCATTTTGTTTGGTTTATTGGCAGGAGTATTCTTCGCCAGAGCCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATACAAGGCAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCCTGGGAAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCA-ACACATTTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCA-GTATGGACCCCCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAGGCCGATAATACTCAAATGCAGGCAGTTTGGGGGAAAAAAAACAATTGACGGGTCGCCGCA-TTTGTAATGTTGTGAAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCCGTTTAATTTTGTGTTGCCCTTCCCTATATGTTCTTCTACACCCGTGTAGGGCTGAGGGTATATCAGTTTTTGGGTCCTGTTAGAAGGAAAATGCCCCAGCTCCTCATGTGCAGAACTCAACTCATGGGATACCGTGATACTAGTGCAGAATTTGAACTGAAAAAAAAAA]

[+] EMBL AK100021             [GCATATTAGATGTTCAGCAAAATAGCTGTAGCGTGTGTATGAGGCTGGCGGATGAATGTGATAGCCGGACTTTATTTGGTCAGTTTGCTCAATCGGGATAACCTTGGAGTTGCTTCCTAGATCACAGCACTTCAATCTGATAGAGAATTTCCATGTCTCAAAACCATGAGACATCCTTTACAAGCAAATAGTTATTTCATATGACAGCCATCGAATGCGCTACTGATGTTTCAAAATCAAGCCGGTTGATGCCTGTGCCTCTGTGGGGGTTGGGTTTCAACAATTGCTTTGAAAAAAAATGTGTTATGCAGCGATGATAATTTGATTGTGTGAATTAACAGCACAAGACCTTTTTCATGTTATTTCTAGAACAGAATTTTGACTCTTTTGGGAAATGCATATGCTTGCAATTTATCCTTCTGGACAAAGCATTCTTAAGTACCATATATTTCATTTGCTTGCTGGATCATGAGGTTTGAGTTCACTTTGAGATATTTGATGAGATGAAACCCAATAGAACATGGCATGCTGTATATAAGGAAGAGTCCTACATATATCTTACATAATTGAATTATTGCTAATGGCATCCTTTTTATCTTGTAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCCAGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAGAGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGCACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTTACATTGTTCTGTAGATTCTTTGTTTTGGTTTTAGAGCATGGAACGTATGTGATTTAAAAATGTTTTTATATTTATCTATGTATTCATAGGGTACAATATGAACACTGTGCTATATTGCTAGCTTTCCACTCTAGGAACTATGCACAAAGAAAGAGGACTTACCTGATGAACTTGTAAATGTGCTTATTGTGAGAATAAGTAGTGATATTTAATAAACTTTTGGCAGTTTAAAAAGTTAATGCAGGGAAACTATTTGTTTGTCCTGACATTTTGCGGGCGTTAATATTCATTATGAATATCTGTTGTGGCTTGCCTTACGTCTTCTCTCGTGCTGCTATTGGTCCATTAGTTGGTTTGGAGAGTGGACGATTAATTACTATCTAAGATTTCTGAACATTTGGAACTGAAACTTTTCATATAAGAATCTATCATGGCTCAGCTTGTAATAAGGATGGTCTGGGTTGAAATTGCGCAACTGGCAGTCTCAGACAAAAATTACTTCCCTCATTTTTAATGCATTTTGTACCTTGCAGTTTGAAGTACATCAATGTTGCAATGCTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATACTTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGCAATTGCAGGAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAACTGCTTTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCACCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTACCACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACGCCTCTCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTATCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGTCTTGTGGGCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGAGCATGGAGAATTCTTTCAGCATTTTGTTTGGTTTATTGGCAGGAGTATTCTTCGCCAGAGCCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATACAAGGCAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCCTGGGAAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCA ACACATTTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCA GTATGGACCCCCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAGGCCGATAATACTCAAATGCAGGCAGTTTGGGGGAAAAAAAACAATTGACGGGTCGCCGCA TTTGTAATGTTGTGAAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACT                                                                                                                                                                               ]
[+] EMBL OSR19431A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCTTGAACTGCTTTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCACCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTACCACTTGGGATTATCCTCGTGCTTAGTTTCAATGAAGTNGAGTACCTTNTTGAAACGCCTCTCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTATCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCANGTGCAACAACATATAGTCTTNTGGGCTCCCTTAATAAGATCCCTNTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGAGCATGGAGAATTCTTTCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI811874             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCAGCTAACCAGAAGAGAGATTGGCACACACATTTGTTACTAT GGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCACGTATGGACCCCCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAAGCCGATAATACTC AATGCA GCA TTTGGGGGAAAAAAAACCATTGACGGGTC CCGCACTTTGTAATGTTGTGAAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCCGTTTAATTTTGTGTTGCCCTTCCCTATATGTTCTTCTACACCCGTGTAGGGCTGAGGGTATATCAGTTTTTGGGTCCTGTTAGAAGGAAAATGCCCCAGCTCCTCATGTGCAGAACTCAACTCATGGGATACCGTGATACTAGTGCAGAATTTGAACTGAAAAAAAAAA]




>consensus_11300#0
GCATATTAGATGTTCAGCAAAATAGCTGTAGCGTGTGTATGAGGCTGGCGGATGAATGTG
ATAGCCGGACTTTATTTGGTCAGTTTGCTCAATCGGGATAACCTTGGAGTTGCTTCCTAG
ATCACAGCACTTCAATCTGATAGAGAATTTCCATGTCTCAAAACCATGAGACATCCTTTA
CAAGCAAATAGTTATTTCATATGACAGCCATCGAATGCGCTACTGATGTTTCAAAATCAA
GCCGGTTGATGCCTGTGCCTCTGTGGGGGTTGGGTTTCAACAATTGCTTTGAAAAAAAAT
GTGTTATGCAGCGATGATAATTTGATTGTGTGAATTAACAGCACAAGACCTTTTTCATGT
TATTTCTAGAACAGAATTTTGACTCTTTTGGGAAATGCATATGCTTGCAATTTATCCTTC
TGGACAAAGCATTCTTAAGTACCATATATTTCATTTGCTTGCTGGATCATGAGGTTTGAG
TTCACTTTGAGATATTTGATGAGATGAAACCCAATAGAACATGGCATGCTGTATATAAGG
AAGAGTCCTACATATATCTTACATAATTGAATTATTGCTAATGGCATCCTTTTTATCTTG
TAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCC
AGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAG
AGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAG
ATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAG
GCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGC
CTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGG
TTTCAGTGCTGGAATATTTCTGATGCTTTATCAGAACATTGTATCTGTGACTATAGTGTC
CACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGT
TTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGC
ACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTTACATTGTTCTGT
AGATTCTTTGTTTTGGTTTTAGAGCATGGAACGTATGTGATTTAAAAATGTTTTTATATT
TATCTATGTATTCATAGGGTACAATATGAACACTGTGCTATATTGCTAGCTTTCCACTCT
AGGAACTATGCACAAAGAAAGAGGACTTACCTGATGAACTTGTAAATGTGCTTATTGTGA
GAATAAGTAGTGATATTTAATAAACTTTTGGCAGTTTAAAAAGTTAATGCAGGGAAACTA
TTTGTTTGTCCTGACATTTTGCGGGCGTTAATATTCATTATGAATATCTGTTGTGGCTTG
CCTTACGTCTTCTCTCGTGCTGCTATTGGTCCATTAGTTGGTTTGGAGAGTGGACGATTA
ATTACTATCTAAGATTTCTGAACATTTGGAACTGAAACTTTTCATATAAGAATCTATCAT
GGCTCAGCTTGTAATAAGGATGGTCTGGGTTGAAATTGCGCAACTGGCAGTCTCAGACAA
AAATTACTTCCCTCATTTTTAATGCATTTTGTACCTTGCAGTTTGAAGTACATCAATGTT
GCAATGCTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATAC
TTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGCAATTGCAG
GAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAACTGCT
TTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCA
CCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTAC
CACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACGCCTC
TCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTA
TCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGTCTTGTGG
GCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGA
GCATGGAGAATTCTTTCAGCATTTTGTTTGGTTTATTGGCAGGAGTATTCTTCGCCAGAG
CCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATACAAGG
CAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCCTGGG
AAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCAACACAT
TTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCAGTATGGACCC
CCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAGGCC
GATAATACTCAAATGCAGGCAGTTTGGGGGAAAAAAAACAATTGACGGGTCGCCGCATTT
GTAATGTTGTGAAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCA
CGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCCGTTTAATTTTG
TGTTGCCCTTCCCTATATGTTCTTCTACACCCGTGTAGGGCTGAGGGTATATCAGTTTTT
GGGTCCTGTTAGAAGGAAAATGCCCCAGCTCCTCATGTGCAGAACTCAACTCATGGGATA
CCGTGATACTAGTGCAGAATTTGAACTGAAAAAAAAAA

consensusID : consensus_11300#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2109
fasta sequence 
                              [GTCGCCGCCTCGCAAAATTTCCGACGCCTCCTCTCCTCTCCTCCTCCGCCGCGCCATTCTTCGCCGCCGCCGCCCGGCTCCGGCGGCGCCATGGGCTCCACCAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCCAGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAGAGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGTTTGAAGTACATCAATGTTGCAATGCTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATACTTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGATAATTTCAGCAATTGCAGGAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAACTGCTTTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCACCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTACCACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACGCCTCTCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTATCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGGTACTGAATGAATTGTAGTGGCTTTTTAAAAAATGTTTATCTTCATGTGCTCTGTCTTCATGAATTTCTAATGTCAATATTGCTCCTGATATAGTCTTGTGGGCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGAGCATGGAGAATTCTTTCAGCATTTTGTTTGGTAGGCTTTTTTTTAATAACAAGGGAAAAGGTACTATGTTATAGATATCACATTCACTAATAAGATTCATACCCATTATCGTGCAGGTTTATTGGCAGGAGTATTCTTCGCCAGAGCCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATACAAGGCAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCCTGGGAAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCAACACATTTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCAG-TATGGA-CCCCCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAGGCCGATAATACTCAAATGCAGG-CAGTTTGGGGAAAAAAAAAAACAATTGACGGGTCGCCGCATTTGTAATGTTGTG-AAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCAGTTTAATTTTGTGTTGCCCTTCCCTATATGTTCTTCTACACCGTGTAGGGCTGAAGGAAAATGCCCAAGCTCCTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGAATTTGAACTGACCTGACTTGTCCCAAAAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK100839             [GTCGCCGCCTCGCAAAATTTCCGACGCCTCCTCTCCTCTCCTCCTCCGCCGCGCCATTCTTCGCCGCCGCCGCCCGGCTCCGGCGGCGCCATGGGCTCCACCAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCCAGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAGAGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGTTTGAAGTACATCAATGTTGCAATGCTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATACTTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGATAATTTCAGCAATTGCAGGAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAACTGCTTTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCACCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTACCACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACGCCTCTCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTATCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGGTACTGAATGAATTGTAGTGGCTTTTTAAAAAATGTTTATCTTCATGTGCTCTGTCTTCATGAATTTCTAATGTCAATATTGCTCCTGATATAGTCTTGTGGGCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGAGCATGGAGAATTCTTTCAGCATTTTGTTTGGTAGGCTTTTTTTTAATAACAAGGGAAAAGGTACTATGTTATAGATATCACATTCACTAATAAGATTCATACCCATTATCGTGCAGGTTTATTGGCAGGAGTATTCTTCGCCAGAGCCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATACAAGGCAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCCTGGGAAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCAACACATTTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCAG TATGGA CCCCCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAGGCCGATAATACTCAAATGCAGG CAGTTTGGGGAAAAAAAAAAACAATTGACGGGTCGCCGCATTTGTAATGTTGTG AAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCAGTTTAATTTTGTGTTGCCCTTCCCTATATGTTCTTCTACACCGTGTAGGGCTGAAGGAAAATGCCCAAGCTCCTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGA                                                                          ]
[+] EMBL AU031819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ttcCAGTTATGGACCCCCCTGTTGTCGCTCCCGTGGTTGTGGTATNCGTCCTCACTTTCACTTACGNTCGAAAGGCCGATAATACTCAAATGCAGGCCAGTTTGGGG  GAAAAAAANCAATTGACGGGTCGCCGCATTTGTAATGTTGTGAAAATTGCAGCGGTTGGATNGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCAGTTTAATTTTGTGTTGCCCTTCCCTATATGTTCTTCTACACCGTGTAGGGCTGAAGGAAAATGCCCAAGCTCCTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGAATTTGAACTGACCTGACTTGTCCCAAAAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11300#1
GTCGCCGCCTCGCAAAATTTCCGACGCCTCCTCTCCTCTCCTCCTCCGCCGCGCCATTCT
TCGCCGCCGCCGCCCGGCTCCGGCGGCGCCATGGGCTCCACCAGAACTCCTTCTATAGCC
ATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCCAGAGACTGTAACAAGTCCT
CTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAGAGGATACAGTGCACTTGGG
AGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAAC
ACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGT
CTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGC
AGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTT
CTGATGCTTTATCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGT
GTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATC
ATATTTGTCGGAATGCTAATTACAAGCATGTTTAGTTTGAAGTACATCAATGTTGCAATG
CTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATACTTCTTT
AAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGATAATTTCAGCAATT
GCAGGAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAAC
TGCTTTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAA
GCCACCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCA
GTACCACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACG
CCTCTCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTT
GCTATCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGGTAC
TGAATGAATTGTAGTGGCTTTTTAAAAAATGTTTATCTTCATGTGCTCTGTCTTCATGAA
TTTCTAATGTCAATATTGCTCCTGATATAGTCTTGTGGGCTCCCTTAATAAGATCCCTCT
CTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGAGCATGGAGAATTCTTTCAGCAT
TTTGTTTGGTAGGCTTTTTTTTAATAACAAGGGAAAAGGTACTATGTTATAGATATCACA
TTCACTAATAAGATTCATACCCATTATCGTGCAGGTTTATTGGCAGGAGTATTCTTCGCC
AGAGCCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATAC
AAGGCAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCC
TGGGAAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCAAC
ACATTTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCAGTATGG
ACCCCCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAA
GGCCGATAATACTCAAATGCAGGCAGTTTGGGGAAAAAAAAAAACAATTGACGGGTCGCC
GCATTTGTAATGTTGTGAAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGC
GTTGCACGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCAGTTTA
ATTTTGTGTTGCCCTTCCCTATATGTTCTTCTACACCGTGTAGGGCTGAAGGAAAATGCC
CAAGCTCCTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGAATTTG
AACTGACCTGACTTGTCCCAAAAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

consensusID : consensus_11300#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 580
fasta sequence 
                              [CAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGGTATGTTACTTTTTTTCTGATTGTTTACCTCTCAAACAATATATTACATTTATTTCTGTGTCGTGCTTCTGCTGCTTGTTGTACCCATTGATAATCTCTTGATGGTCTTTTGCTGCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGCACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTT]

[+] EMBL CF304293             [CAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGGTATGTTACTTTTTTTCTGATTGTTTACCTCTCAAACAATATATTACATTTATTTCTGTGTCGTGCTTCTGCTGCTTGTTGTACCCATTGATAATCTCTTGATGGTCTTTTGCTGCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGCACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTT]
[+] EMBL CF303855             [CAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTTCTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGGTATGTTACTTTTTTTCTGATTGTTTACCTCTCAAACAATATATTACATTTATTTCTGTGTCGTGCTTCTGCTGCTTGTTGTACCCATTGATAATCTCTTGATGGTCTTTTGCTGCAGAACATTGTATCTGTGACTATAGTGTCCACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAAT                                                                     ]




>consensus_11300#2
CAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAGATCCTT
CTGTATTGACAACACTGACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATAGGCCTTC
ACATTTCCTCAGTCTCCCAAAGATACAGAATCAGGCTCTTCTATCTGGTCTTGCCTATTG
CATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTATGGTTTCAG
TGCTGGAATATTTCTGATGCTTTATCAGGTATGTTACTTTTTTTCTGATTGTTTACCTCT
CAAACAATATATTACATTTATTTCTGTGTCGTGCTTCTGCTGCTTGTTGTACCCATTGAT
AATCTCTTGATGGTCTTTTGCTGCAGAACATTGTATCTGTGACTATAGTGTCCACTCTAT
CGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGTTTGGTTGC
CTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGCACCAGACA
TTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTT

consensusID : consensus_11300#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 191
fasta sequence 
                              [CCCCCCGTGTCCNCGTAGTAGTGGTGTCCGTGTCCNTACCACCCCGTTGTTAGGGTCTGATGGGGTAGTATTCAGGTGTCTTTTGGGGTCCGTGGTGTAGAACGGAAAAAGTGCCCCACAGCGTCCGTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGAATTTGAACTAAAAAAAA]

[+] EMBL BQ906669             [CCCCCCGTGTCCNCGTAGTAGTGGTGTCCGTGTCCNTACCACCCCGTTGTTAGGGTCTGATGGGGTAGTATTCAGGTGTCTTTTGGGGTCCGTGGTGTAGAACGGAAAAAGTGCCCCACAGCGTCCGTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGAATTTGAACTAAAAAAAA]




>consensus_11300#3
CCCCCCGTGTCCNCGTAGTAGTGGTGTCCGTGTCCNTACCACCCCGTTGTTAGGGTCTGA
TGGGGTAGTATTCAGGTGTCTTTTGGGGTCCGTGGTGTAGAACGGAAAAAGTGCCCCACA
GCGTCCGTCATGTGCAGAACTCAAACTCATGGGATACAGTGATACTAGTGCAGAATTTGA
ACTAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11300#0      GCATATTAGATGTTCAGCAAAATAGCTGTAGCGTGTGTATGAGGCTGGCGGATGAATGTG 60
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      ATAGCCGGACTTTATTTGGTCAGTTTGCTCAATCGGGATAACCTTGGAGTTGCTTCCTAG 120
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      ATCACAGCACTTCAATCTGATAGAGAATTTCCATGTCTCAAAACCATGAGACATCCTTTA 180
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CAAGCAAATAGTTATTTCATATGACAGCCATCGAATGCGCTACTGATGTTTCAAAATCAA 240
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GCCGGTTGATGCCTGTGCCTCTGTGGGGGTTGGGTTTCAACAATTGCTTTGAAAAAAAAT 300
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GTGTTATGCAGCGATGATAATTTGATTGTGTGAATTAACAGCACAAGACCTTTTTCATGT 360
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TATTTCTAGAACAGAATTTTGACTCTTTTGGGAAATGCATATGCTTGCAATTTATCCTTC 420
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TGGACAAAGCATTCTTAAGTACCATATATTTCATTTGCTTGCTGGATCATGAGGTTTGAG 480
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TTCACTTTGAGATATTTGATGAGATGAAACCCAATAGAACATGGCATGCTGTATATAAGG 540
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      -------------------GTCGCCGCCTCGCAAAATTTCCGACGCCTCCTCTCCTCTCC 41
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AAGAGTCCTACATATATCTTACATAATTGAATTATTGCTAATGGCATCCTTTTTATCTTG 600
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TCCTCCGCCGCGCCATTCTTCGCCGCCGCCGCCCGGCTCCGGCGGCGCCATGGGCTCCAC 101
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCC 660
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      CAGAACTCCTTCTATAGCCATTCCTGTGGATTCAGATGCCTCTCCTAGGAAAAATACGCC 161
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAG 720
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      AGAGACTGTAACAAGTCCTCTTGTGAATGGTGAAAAGAGTATTTTCCGGGATCAGGTTAG 221
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAG 780
consensus_11300#2      ------CAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAG 54
consensus_11300#1      AGGATACAGTGCACTTGGGAGTCCTTTGAGGAGAGAAGTTGGGAACAGATCTATAACAAG 281
consensus_11300#3      ------------CCCCCCGTGTCCNCGTAGTAGTGGTGTCCGTGTC---CNTACCACCCC 45
                                    *    * ****    ** ** *  **  *   *     **  **   

consensus_11300#0      ATCCTTCTGTATTGACAACACTG-ACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATA 839
consensus_11300#2      ATCCTTCTGTATTGACAACACTG-ACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATA 113
consensus_11300#1      ATCCTTCTGTATTGACAACACTG-ACTTGGAAGATGGTAAGGCTGAAAAAGACAGAGATA 340
consensus_11300#3      GTTGTTAGGGTCTGATGGGGTAGTATTCAGGTGTCTTTTGGGGTCCGTGGTGTAGAACGG 105
                        *  **  *   ***       * * *  *  *    *  ** *         ***    

consensus_11300#0      GGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAA-TCAGGCTCTTCTATCTGGTCTT 898
consensus_11300#2      GGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAA-TCAGGCTCTTCTATCTGGTCTT 172
consensus_11300#1      GGCCTTCACATTTCCTCAGTCTCCCAAAGATACAGAA-TCAGGCTCTTCTATCTGGTCTT 399
consensus_11300#3      AAAAAGTGC---CCCACAGCGTCCGTCATGTGCAGAACTCAAACTC----ATGGGATACA 158
                               *    ** ***  ***   *  * ***** ***  ***    **  * *   

consensus_11300#0      GCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTAT 958
consensus_11300#2      GCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTAT 232
consensus_11300#1      GCCTATTGCATATCATCCTGCAGCATGATTTTAGTTAATAAGTATATCTTATCTGGCTAT 459
consensus_11300#3      G-----------TGATACTAGTGCAGAATTTGAACTAAAAAAAA---------------- 191
                       *           * ** **   ***  **** *  *** **  *                

consensus_11300#0      GGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAG------------------------ 994
consensus_11300#2      GGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAGGTATGTTACTTTTTTTCTGATTGT 292
consensus_11300#1      GGTTTCAGTGCTGGAATATTTCTGATGCTTTATCAG------------------------ 495
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      ------------------------------------------------------------
consensus_11300#2      TTACCTCTCAAACAATATATTACATTTATTTCTGTGTCGTGCTTCTGCTGCTTGTTGTAC 352
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      ----------------------------------AACATTGTATCTGTGACTATAGTGTC 1020
consensus_11300#2      CCATTGATAATCTCTTGATGGTCTTTTGCTGCAGAACATTGTATCTGTGACTATAGTGTC 412
consensus_11300#1      ----------------------------------AACATTGTATCTGTGACTATAGTGTC 521
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGT 1080
consensus_11300#2      CACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGT 472
consensus_11300#1      CACTCTATCGCTCTCTGGTGTTATCCCAACTGAACCACTAACTTGGAAGCTAATCAAAGT 581
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGC 1140
consensus_11300#2      TTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGGTATGC 532
consensus_11300#1      TTGGTTGCCTGTGAATATCATATTTGTCGGAATGCTAATTACAAGCATGTTTAGTT-TGA 640
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      ACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTTACATTGTTCTGT 1200
consensus_11300#2      ACCAGACATTCAGATTGTTTTGATCTGAACGCTTTTTGGGTGCAATTT------------ 580
consensus_11300#1      AGTA--CATCAATGTTGCAATG--CTGA---CTATATTGAAGAATGTTGCCAATGTATTG 693
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AGATTCTTTGTTTTGGTTTTAGAGCATGGAACGTATGTGATTTAAAAATGTTTTTATATT 1260
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ACTGCTTCTGGGGAGACATACTTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCT 753
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TATCTATGTATTCATAGGGTACAATATGAACACTGTGCTATATTGCTAGCTTTCCACTCT 1320
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      CTCACGTTGATGATAATTTCAGCAATTGCAGGAGGAATAACAGATTTGTCTTTTAATGCA 813
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AGGAACTATGCACAAAGAAAGAGGACTTACCTGATGAACTTGTAAATGTGCTTATTGTGA 1380
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ATTGGTTATACTTGGCAGATCTTGAACTGCTTTCTAACGGCATCATATTCGCTTACATTA 873
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GAATAAGTAGTGATATTTAATAAACTTTTGGCAGTTTAAAAAGTTAATGCAGGGAAACTA 1440
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      CGGCATGTAATGGACAGTGCCAAGCAAGCCACCAAATCTGGGAATTTGAATGAGTTATCA 933
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TTTGTTTGTCCTGACATTTTGCGGGCGTTAATATTCATTATGAATATCTGTTGTGGCTTG 1500
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ATGGTTTTACTGAATAATATTCTTTCAGTACCACTTGGGATTATCCTCGTGCTTGGTTTC 993
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CCTTACGTCTTCTCTCGTGCTGCTATTGGTCCATTAGTTGGTTTGGAGAGTGGACGATTA 1560
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      AATGAAGTGGAGTACCTTTTTGAAACGCCTCTCTTAAGGATGCCCATGTTTTGGATAGTC 1053
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      ATTACTATCTAAGATTTCTGAACATTTGGAACTGAAACTTTTCATATAAGAATCTATCAT 1620
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ATTACTGCTAGTGGAGTTTTGGGGCTTGCTATCAGCTTTACTTCTATGTGGTTTCTTCAC 1113
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GGCTCAGCTTGTAATAAGGATGGTCTGGGTTGAAATTGCGCAACTGGCAGTCTCAGACAA 1680
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      CAGTCAAGTGCAACAACATATAGGTACTGAATGAATTGTAGTGGCTTTTTAAAAAATGTT 1173
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AAATTACTTCCCTCATTTTTAATGCATTTTGTACCTTGCAGTTTGAAGTACATCAATGTT 1740
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TATCTTCATGTGCTCTGTCTTCATGAATTTCTAATGTCAATATTGCTCCTGATATAGTCT 1233
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GCAATGCTGACTATATTGAAGAATGTTGCCAATGTATTGACTGCTTCTGGGGAGACATAC 1800
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TGTGGGCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCG 1293
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TTCTTTAAAAAGCAGCATGACAGACAAGTTTGGATTTCTCTCACGTTGATGCAATTGCAG 1860
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GACG--AGCATGGAGAATTCTTTCAGCATTTTGTTTGGTAGGCTTTTTTTTAATAACAAG 1351
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GAGGAATAACAGATTTGTCTTTTAATGCAATTGGTTATACTTGGCAGATCTTGAACTGCT 1920
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GGAAAAGGTACTATGTTATAGATATCACATTCACTAATAAGATTCATACCCATTATCGTG 1411
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TTCTAACGGCATCATATTCGCTTACATTACGGCATGTAATGGACAGTGCCAAGCAAGCCA 1980
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      CAGGTTTATTGGCAGGAGTATTCTTCGCCAGAGCCAAATTGCTTAATAACTCTCAGTCCT 1471
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CCAAATCTGGGAATTTGAATGAGTTATCAATGGTTTTACTGAATAATATTCTTTCAGTAC 2040
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      AGTCGTAGGCCAAGCTTTATAGGTTATACAAGGCAGAATTATTCTAGTCAGTCAGATTCA 1531
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CACTTGGGATTATCCTCGTGCTTGGTTTCAATGAAGTGGAGTACCTTTTTGAAACGCCTC 2100
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GAACAGGATGCTCGCTCGGATTATGTTCCTGGGAAATTTGTGCAGATGTAAAGATCCTTC 1591
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TCTTAAGGATGCCCATGTTTTGGATAGTCATTACTGCTAGTGGAGTTTTGGGGCTTGCTA 2160
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TCCAGCTAACAAGAAGAGAGATTGGCAACACATTTGTTACTATGGGGCCATGGGGCTGCT 1651
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TCAGCTTTACTTCTATGTGGTTTCTTCACCAGTCAAGTGCAACAACATATAGTCTTGTGG 2220
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TCAGTTCTTTTTCCTCGAAATCAGTATGGACCCCCTGTTGTCGCTCTCGTGGTTGTGGTA 1711
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GCTCCCTTAATAAGATCCCTCTCTCTATTGCTGGAATCCTTCTCTTCAAAGTGCGGACGA 2280
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TACGTCCTCACTTTCACTTACGATCGAAAGGCCGATAATACTCAAATGCAGGCAGTTTGG 1771
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GCATGGAGAATTCTTTCAGCATTTTGTTTGGTTTATTGGCAGGAGTATTCTTCGCCAGAG 2340
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GGAAAAAAAAAAACAATTGACGGGTCGCCGCATTTGTAATGTTGTGAAATTGCAGCGGTT 1831
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CCAAATTGCTTAATAACTCTCAGTCCTAGTCGTAGGCCAAGCTTTATAGGTTATACAAGG 2400
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCACGGCTGCTTGGCCTGCTGCTGTGTT 1891
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CAGAATTATTCTAGTCAGTCAGATTCAGAACAGGATGCTCGCTCGGATTATGTTCCTGGG 2460
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GAGTATACTGTATATACTTGTGCAGTTTAATTTTGTGTTGCCCTTCCCTATATGTTCTTC 1951
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      AAATTTGTGCAGATGTAAAGATCCTTCTCCAGCTAACAAGAAGAGAGATTGGCAACACAT 2520
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      TACACCGTGTAGGGCTGAAGGAAAATGCCCAAGCTCCTCATGTGCAGAACTCAAACTCAT 2011
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TTGTTACTATGGGGCCATGGGGCTGCTTCAGTTCTTTTTCCTCGAAATCAGTATGGACCC 2580
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      GGGATACAGTGATACTAGTGCAGAATTTGAACTGACCTGACTTGTCCCAAAAATNAAAAA 2071
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CCTGTTGTCGCTCTCGTGGTTGTGGTATACGTCCTCACTTTCACTTACGATCGAAAGGCC 2640
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 2109
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GATAATACTCAAATGCAGGCAGTTTGGGGGAAAAAAAACAATTGACGGGTCGCCGCATTT 2700
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GTAATGTTGTGAAATTGCAGCGGTTGGATCGAAATGGGATTGGTGTTTTTGTGCGTTGCA 2760
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CGGCTGCTTGGCCTGCTGCTGTGTTGAGTATACTGTATATACTTGTGCCGTTTAATTTTG 2820
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      TGTTGCCCTTCCCTATATGTTCTTCTACACCCGTGTAGGGCTGAGGGTATATCAGTTTTT 2880
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      GGGTCCTGTTAGAAGGAAAATGCCCCAGCTCCTCATGTGCAGAACTCAACTCATGGGATA 2940
consensus_11300#2      ------------------------------------------------------------
consensus_11300#1      ------------------------------------------------------------
consensus_11300#3      ------------------------------------------------------------
                                                                                   

consensus_11300#0      CCGTGATACTAGTGCAGAATTTGAACTGAAAAAAAAAA 2978
consensus_11300#2      --------------------------------------
consensus_11300#1      --------------------------------------
consensus_11300#3      --------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)