These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11318#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2692 fasta sequence [AATCCATTATTCCCCTATTACATCAAGCACTAATTTTCATGAAGAGCTGTGACTATAGTTATACAATCTTTTGCATCACCAATTTCAAAATTCGTCTTCACTGAGATCTGAAGGAATTTAATCTAAGAAAGGGTGATGGCTGGCATGGAGGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTGCTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTAGAAGCTGTGGATGAACTAACTTCCACCATCCACAGCCTTGAAAGCATGTCAGCGGACCATATCCTCCTTGAGAGTTTTGACCATCTTCTAGAGCGTTGTTCCTTGAGGCTTGGAGAAGAGTTGCAGCACCTGATTGATGCATCTGGCTTCGATACCAACTGCAGCTACCCCAACACCAGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAGCCAGTTAGCAACTTCGACATCATTGTTGATGCTTTACCTGAGGGCGTAATCTTTGAGGCAAACCGAATTGCAAAGAGGATGGTTGCCGCTGGTTTTGGTGATTCATGTGCTGAGACCTATGCTTCTTCACGCCTCAACTTCATTGATGAGAGCATTGCACGCCTTGGGGTTCATGCTCACATGGCAGAGATGTTCAAGTCAGCATCGTGGGAGGAGCTTGAGATTCAAATCATGTGCTGGATCCCTGCAATTCGTGTTGTGTTTCACATCTTGATCCCAAGTGAAAGACACCTGTGTGATAGCATTTTTGAGGGTTTCACATCCTACAGTGACGTTGCTTTTGTCACTGCGTGTCATCCATTTCTCCAACTCCTATCCTTCGGAAATTTTATTGCCGCTGCTGGAAAAAATCCAGAATGTCTATTCCGCATAGTTGATATGTATGATGCTGTACGTGATATACTTCCTGTTCTTGATGATGCTTTTAATCCTGAAGTAGCTGCTCTTCGTGAATGCCTCGGATTGTCAATTAAGGCCATCTTAATGGCTCTTGAAAACCTAGTACGACGTGATCCAAGTGAGTCTTGTCCACTAGATGGTGGAGTGCATCCAATGACAAGGTATGTGATGAACTACCTTGTGACAGCATGTGTTTCTCGCCATACTTTGGAAGAAGTGATGCTATTAGAGTTTGGTAGTTCTGATCCTTCTGGAAACTGTCCAATAGAACCTGATCGTCCAACATCATCACTGGCAATCCACCTTGCTTGGATTGTGGATGTGCTCACGGGAAATCTTGTTTCAAAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAATTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCATTTTAGTGGAGGAGCTGGTAATTCCAGCCTACAGGGATATGGCTGAGATGTTGAAGGCAACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCAATGACCAGCCAAATGGTGGAAGACCTGCCAAGCAGAACTGCCTCCCACCCAGGCTAAACAGTTCCTGCATTCCAAAGCCTGTGCTATCCGGAGTACACTATCCTGGTATTCACCTATGTTCATCTTCTTCCTCTTTAAGGAACGATAATAACGTGTGAAGTCATTGGTTCCTGAGCTGATAAATATCAGGGAGTTCTCTATGATCCTGGAAGCCTCCTCCTCTCCGACGATGTTCCTGAGCCGGAGGAGGTACTCCTTGAAGAGGTTCACCTGTTTCGACATTGGCAGGGTATTGGACAAGCGTGACGTCTGGTCTTCAAATCCTGAACCAGCCGACGCGAAGTTCACCCCGGTCATGATGTCATTGTTGGACAGGTCCTTCTCCAGGAATGGTGGTGAGAATTCTTTGAGCTGCAGCTTCTCATTGAGGAGGTCTGGAACAAGCCGGCCATTGGAGAACCTCCCTGTTGGCTTTCTTCCTGGGAAGTTCCTGCCGTAAGGAGCATGGTTTCCCACAGCCAATGTTGGGATATAATTGTTGTTGCCGGTGTCGAGAACGGAGTCGCCAAAGTAGAAGATAGCCGAGAACTTTGGCTGAGTTCTCTTGGAGGTGGAAATGGTGGTGGTGGAGGAAAGGAGGAGCACTACTAGGAGTAGAATGGTGTGCGCCATGAGAAGGAACCCCTTGCCTTGGTTTTAATACTCTCCAGACTCCAGTTGGTTCTTTGTTATATTTCCAGGGGGGTAATACATGCCTAATAAATTGGGGAAATATTTAGCTGATTCGCAGTAAGTAATGCATATCTCCCGGATATGTACTATTTAATGTTTTCTTTTGCATGAAACTGCTGTCCTTTTTCTTGACTCGAGTTGGTTGTTTTTGGCAGAACTGGAGATTTTGTATTTACTACTCTACAGTAGATGGTTAGCATGCGATGCAAGCATGTGCCCT] [+] EMBL AK122173 [AATCCATTATTCCCCTATTACATCAAGCACTAATTTTCATGAAGAGCTGTGACTATAGTTATACAATCTTTTGCATCACCAATTTCAAAATTCGTCTTCACTGAGATCTGAAGGAATTTAATCTAAGAAAGGGTGATGGCTGGCATGGAGGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTGCTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTAGAAGCTGTGGATGAACTAACTTCCACCATCCACAGCCTTGAAAGCATGTCAGCGGACCATATCCTCCTTGAGAGTTTTGACCATCTTCTAGAGCGTTGTTCCTTGAGGCTTGGAGAAGAGTTGCAGCACCTGATTGATGCATCTGGCTTCGATACCAACTGCAGCTACCCCAACACCAGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAGCCAGTTAGCAACTTCGACATCATTGTTGATGCTTTACCTGAGGGCGTAATCTTTGAGGCAAACCGAATTGCAAAGAGGATGGTTGCCGCTGGTTTTGGTGATTCATGTGCTGAGACCTATGCTTCTTCACGCCTCAACTTCATTGATGAGAGCATTGCACGCCTTGGGGTTCATGCTCACATGGCAGAGATGTTCAAGTCAGCATCGTGGGAGGAGCTTGAGATTCAAATCATGTGCTGGATCCCTGCAATTCGTGTTGTGTTTCACATCTTGATCCCAAGTGAAAGACACCTGTGTGATAGCATTTTTGAGGGTTTCACATCCTACAGTGACGTTGCTTTTGTCACTGCGTGTCATCCATTTCTCCAACTCCTATCCTTCGGAAATTTTATTGCCGCTGCTGGAAAAAATCCAGAATGTCTATTCCGCATAGTTGATATGTATGATGCTGTACGTGATATACTTCCTGTTCTTGATGATGCTTTTAATCCTGAAGTAGCTGCTCTTCGTGAATGCCTCGGATTGTCAATTAAGGCCATCTTAATGGCTCTTGAAAACCTAGTACGACGTGATCCAAGTGAGTCTTGTCCACTAGATGGTGGAGTGCATCCAATGACAAGGTATGTGATGAACTACCTTGTGACAGCATGTGTTTCTCGCCATACTTTGGAAGAAGTGATGCTATTAGAGTTTGGTAGTTCTGATCCTTCTGGAAACTGTCCAATAGAACCTGATCGTCCAACATCATCACTGGCAATCCACCTTGCTTGGATTGTGGATGTGCTCACGGGAAATCTTGTTTCAAAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAATTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCATTTTAGTGGAGGAGCTGGTAATTCCAGCCTACAGGGATATGGCTGAGATGTTGAAGGCAACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCAATGACCAGCCAAATGGTGGAAGACCTGCCAAGCAGAACTGCCTCCCACCCAGGCTAAACAGTTCCTGCATTCCAAAGCCTGTGCTATCCGGAGTACACTATCCTGGTATTCACCTATGTTCATCTTCTTCCTCTTTAAGGAACGATAATAACGTGTGAAGTCATTGGTTCCTGAGCTGATAAATATCAGGGAGTTCTCTATGATCCTGGAAGCCTCCTCCTCTCCGACGATGTTCCTGAGCCGGAGGAGGTACTCCTTGAAGAGGTTCACCTGTTTCGACATTGGCAGGGTATTGGACAAGCGTGACGTCTGGTCTTCAAATCCTGAACCAGCCGACGCGAAGTTCACCCCGGTCATGATGTCATTGTTGGACAGGTCCTTCTCCAGGAATGGTGGTGAGAATTCTTTGAGCTGCAGCTTCTCATTGAGGAGGTCTGGAACAAGCCGGCCATTGGAGAACCTCCCTGTTGGCTTTCTTCCTGGGAAGTTCCTGCCGTAAGGAGCATGGTTTCCCACAGCCAATGTTGGGATATAATTGTTGTTGCCGGTGTCGAGAACGGAGTCGCCAAAGTAGAAGATAGCCGAGAACTTTGGCTGAGTTCTCTTGGAGGTGGAAATGGTGGTGGTGGAGGAAAGGAGGAGCACTACTAGGAGTAGAATGGTGTGCGCCATGAGAAGGAACCCCTTGCCTTGGTTTTAATACTCTCCAGACTCCAGTTGGTTCTTTGTTATATTTCCAGGGGGGTAATACATGCCTAATAAATTGGGGAAATATTTAGCTGATTCGCAGTAAGTAATGCATATCTCCCGGATATGTACTATTTAATGTTTTCTTTTGCATGAAACTGCTGTCCTTTTTCTTGACTCGAGTTGGTTGTTTTTGGCAGAACTGGAGATTTTGTATTTACTACTCTACAGTAGATGGTTAGCATGCGATGCAAGCATGTGCCCT] [+] EMBL CB677427 [ GGGTTTCACATCCTACAGTGACGTTGCTTTTGTCACTGCGTGTCATCCATTTCTCCAACTCCTATCCTTCGGAAATTTTATTGCCGCTGCTGGAAAAAATCCAGAATGTCTATTCCGCATAGTTGATATGTATGATGCTGTACGTGATATACTTCCTGTTCTTGATGATGCTTTTAATCCTGAAGTAGCTGCTCTTCGTGAATGCCTCGGATTGTCAATTAAGGCCATCTTAATGGCTCTTGAAAACCTAGTACGACGTGATCCAAGTGAGTCTTGTCCACTAGATGGTGGAGTGCATCCAATGACAAGGTATGTGATGAACTACCTTGTGACAGCATGTGTTTCTCGCCATACTTTGGAAGAAGTGATGCTATTAGAGTTTGGTAGTTCTGATCCTTCTGGAAACTGTCCAATAGAACCTGATCGTCCAACATCATCACTGGCAATCCACCTTGCTTGGATTGTGGATGTGCTCACGGGAAATCTTGTTTCAAAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGA ] consensusID : consensus_11318#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 837 fasta sequence [ACTGGCAATCCACCTGCTTGGGATTGTGGATGTGCTCACGGGAAATCTTGTTTCAAAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAATTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCATTTTAGTGGAGGAGCTGGTAATTCCA-GCCTACAGGGATATGGCTGAGATGTTGAAGGCAACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCAATGACCAGGTGAAGTGCTTCTTCTGGGTGCGTTGTGCTAATCTGTGTTATAATGTTTCTCAGGGAGACCAGCCTAAGGTGTGTAGCATCCTTGTTTTAGCCACTTGTATTATTTTCACAGTATGTGCTGTAGTGGTTGATGCTTTACTAATTGGGATCATGTGAACTCTGGAGTCCTAGAGCAACTAATGCTAATATACTACTGCACTGTTTTACCCAGGATTTATCTTCTTCTCCCTCTGCTCCATATTGTAAGACATTTTAGTTTTCTAAGTCAGACTTCTTAAACTTTGACCAAAAAAAAGGAAAAAAAAA] [-] EMBL CB682151 [ACTGGCAATCCACCTGCTTGGGATTGTGGATGTGCTCACGGGAAATCTTGTTTCAAAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAATTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCATTTTAGTGGAGGAGCTGGTAATTCCA GCCTACAGGGATATGGCTGAGATGTTGAAGGCAACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCAATGACCAGGTGAAGTGCTTCTTCTGGGTGCGTTGTGCTAATCTGTGTTATAATGTTTCTCAGGGAGACCAGCCTAAGGTGTGTAGCATCCTTGTTTTAGCCACTTGTATTATTTTCACAGTATGTGCTGTAGTGGTTGATGCTTTACTAATTGGGATCATGTGAACTCTGGAGTCCTAGAGCAACTAATGCTAATATACTACTGCACTGTTTTACCCAGGATTTATCTTCTTCTCCCTCTGCTCCATATTGTAAGACATTTTAGTTTTCTAAGTCAGACTTCTTAAACTTTGACCAAAAAAAAGG ] [-] EMBL CB682153 [ GGATGTGCTCACGGGAAATCTTGTTTCACAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTACCCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAATTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCATTTTAGTGGAGGAGCTGGTAATTCCA GCCTACAGGGATATGGCTGAGATGTTGAAGGCAACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCAATGACCAGGTGAAGTGCTTCTTCTGGGTGCGTTGTGCTAATCTGTGTTATAATGTTTCTCAGGGAGACCAGCCTAAGGTGTGTAGCATCCTTGTTTTAGCCACTTGTATTATTTTCACAGTATGTGCTGTAGTGGTTGATGCTTTACTAATTGGGATCATGTGAACTCTGGAGTCCTAGAGCAACTAATGCTAATATACTACTGCACTGTTTTACCCAGGATTTATCTTCTTCTCCCTCTGCTCCATATTGTAAGACATTTTAGTTTTCTAAGTCAGACTTCTTAAACTTTGACCAAAAAAAAGG ] [-] EMBL CB677428 [ CAAGGTTTATAGCCATGCTCCTCTCAGTTGTGTCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGGTCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGGAATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTTGCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAATTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCATTTTAGTGGAGGAGCTGGTAATTCCA GCCTACAGGGATATGGCTGAGATGTTGAAGGCAACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCAATGACCAGGTGAAGTGCTTCTTCTGGGTGCGTTGTGCTAATCTGTGTTATAATGTTTCTCAGGGAGACCAGCCTAAGGTGTGTAGCATCCTTGTTTTAGCCACTTGTATTATTTTCACAGTATGTGCTGTAGTGGTTGATGCTTTACTAATTGGGATCATGTGAACTCTGGAGTCCTAGAGCAACTAATGCTAATATACTA ] [+] EMBL BI804949 [ AGCTGGTAATTCCACGCCTACAGGGATATGGCTGAGATGTTGAA GC ACAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGTTGTTCAAAGCCATGACCAGGTGAAGTGCTTCTTCTGGGTGCGTTGTGCTAATCTGCGTTATAATGTTTCTCAGGGAGACCAGCCTAAGGTGTGTAGCATCCTTGTTTTAGCCACTTGTATTATTTTCACAGTATGTGCTGTAGTGGTTGATGCTTTACTAATTGGGATCATGTGAACTCTGGAGTCCTAGAGCAACTAATGCTAATATACTACTGCACTGTTTTACCCAGGATTTATCTTCTTCTCCCTCTGCTCCATATTGTAAGACATTTTAGTTTTCTAAGTCAGACTTCTTAAACTTTGACCACAGTTTATAAAAAAAAAA] consensusID : consensus_11318#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 805 fasta sequence [AGCACCATTTTTCATGAAGAGCTGTGACTATA-GTTATACAATC-TTTTGCATCACCAATTTCAAAATTCGTCTTCACTGAGGTATGTTCGCAATTTCATTCATCCTAGTCAATTTTGTCAGCTGCAGATCTTTGGACTGGACTGCACCATCCTCTTCCATGGCTTGCACTGAAGACTCAAGAAGTTCATATATCCAAAGTTGCAGATCTGAAGGAATTTAATCTAAGAAAGGGTGATGGCTGGCATGGAGGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTGCTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTAGAAGCTGTGGATGAACTAACTTCCACCATCCACAGCCTTGAAAGCATGTCAGCGGACCATATCCTCCTTGAGAGTTTTGACCATCTTCTAGAGCGTTGTTCCTTGAGGCTTGGAGAAGAGTTGCAGCACCTGATTGATGCATCTGGCTTCGATACCAACTGCAGCTACCCCAACACCAGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAGCCAGTTAGCAACTTCGACATCATTGTTGATGCTTTACCTGAGGGCGTAATCTTTGAGGCAAACCGAATTGCAAAGAGGATGGTTGCCGCTGGTTTTGGTGATTCATGTGCTGAGACCTATGCTTCTTCACGCCTCAACTTCATTGATGAGAGCATTGCACGCCTTGGGGTTCATGCTCACATGGCAGAGATGTTCAAGTCAGCATCGTGGGAGGAGCTTGAGATTCAAATCATGTGCT] [+] EMBL CB682150 [AGCACCATTTTTCATGAAGAGCTGTGACTATA GTTATACAATC TTTTGCATCACCAATTTCAAAATTCGTCTTCACTGAGGTATGTTCGCAATTTCATTCATCCTAGTCAATTTTGTCAGCTGCAGATCTTTGGACTGGACTGCACCATCCTCTTCCATGGCTTGCACTGAAGACTCAAGAAGTTCATATATCCAAAGTTGCAGATCTGAAGGAATTTAATCTAAGAAAGGGTGATGGCTGGCATGGAGGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTGCTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTAGAAGCTGTGGATGAACTAACTTCCACCATCCACAGCCTTGAAAGCATGTCAGCGGACCATATCCTCCTTGAGAGTTTTGACCATCTTCTAGAGCGTTGTTCCTTGAGGCTTGGAGAAGAGTTGCAGCACCTGATTGATGCATCTGGCTTCGATACCAACTGCAGCTACCCCAACACCAGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAGCCAGTTAGCAACTTCGACATCATTGTTGATGCTTTACCTGAGGGCGTAATCTTTGAGGCAAACCGAATTGCAAAGAGGATGGTTGCCGCTGGTTTTGGTGATTCATGTGCTGAGACCTATGCTTCTTCACGCCTCAACTTCATTGATGAGAGCATTGCACGCCTTGGGGTTCATGCTCACATGGCAGAGATGTTCAAGTCAGCATCGTGGGAGGAGCTTGAGATTCAAATCATGTGCT] [+] EMBL CB682152 [AGCACTAATTTTCATGAAGAGCTGTGACTATAGGTTATACAATCATTTTGCATCACCAATTTCAAAATTCGTCTTCACTGAGGTATGTTCGCAATTTCATTCATCCTACTCAATTTTGTCAGCTGCAGATCTTTGGACTGGACTGCACCATCCTCTTCCATGGCTTGCACTGAAGACTCAAGAAGTTCATATATCCAAAGTTGCAGATCTGAAAGAATTTAATCTAAGAAAGGGTGATGGCTGGCATGGAAGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTGCTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTACAAGCTGTGGATGAACTAACTTCCACCATCCACAGCCTTGAAAGCATGTCAGCGGACCATATCCTCCTTGAGAGTTTTGACCATCTTCTAAAGCGTTGTTCCTTGAGGCTTGGAGAAGAGTTGCAGCACCTGATTGATGCATCTGGCTTCTATACCAACTGCAGCTACCCCAACACCAGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAGCCAGTTAGCAACTTCAACATCATTGTTGATGCTTTACCTGAGGGCGTAATCTTTGAGGCAAACCGAATTGCAAAGAGGATGGATGCCGCTGGTTCTGGAGATTCATGAGCTGAGACCTATGCTTCTTCACGCCTCAGCTTCATTGATGAGAGC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11318#0 ------------------------------------------------------------ consensus_11318#2 AGCACCATTTTTCATGA--AGAGCTGTGACTATAGTTATACAATCTTTTGCATCACCAAT 58 consensus_11318#1 ACTGGCAATCCACCTGCTTGGGATTGTGGATGTGCTCACGGGAAATCTTGTTTCA--AAA 58 consensus_11318#0 ---------------------------------AATCCATTATTCCC---CTATTACATC 24 consensus_11318#2 TTCAAAATTCGTCTTCACTGAGGTATGTTCGCAATTTCATTCATCCTAGTCAATTTTGTC 118 consensus_11318#1 TCCAAGGTTTATAGCCAT-----GCTCCTCTCAGTTGTGT-CTTCCTGGTTAACAATGGG 112 * * *** * consensus_11318#0 AAGCACTAATTTTCATGAAGAGCTGTGACTATAGTTATACAATCTTTTGC--ATCACCAA 82 consensus_11318#2 AGCTGCAGATCTTTGGACTGGACTGC-ACCATCCTC-TTCCATGGCTTGC--ACTGAAGA 174 consensus_11318#1 ATCTATATAATCAAGAA--AGTCAATGGTTGTGAAC--TCAAGGTCTTGCTGGGTGAGGA 168 * * * * * * **** * consensus_11318#0 TTTCAA-AA-TTCGTCTTCACTGAG------ATCTGAAGGAATTTAATCTAAGAAAGGGT 134 consensus_11318#2 CTCAAG-AAGTTCATATATCCAAAGTTGCAGATCTGAAGGAATTTAATCTAAGAAAGGGT 233 consensus_11318#1 TTGGATCAAGGTAATACATTCAAAGGTT---AACCAATGGATTTTGGAATACCGACGGGC 225 * * ** * * * ** * * * *** *** ** * *** consensus_11318#0 GATGGCTGGCATGGAGGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTG 194 consensus_11318#2 GATGGCTGGCATGGAGGATACTCTGCAGGCACTTAACGACCTGATTTCCCAATTTCTCTG 293 consensus_11318#1 TACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAA-GGTTTTGCAG-----CAA 279 * ** * ** * * * * * ** * * *** ** * consensus_11318#0 CTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTAGAAGCTGTGGA 254 consensus_11318#2 CTTGAATCGGCCCCTCTGGTCTAGTTCTGATGATGCTGATGCCTTCTTAGAAGCTGTGGA 353 consensus_11318#1 CGTGAAT--GTTATTACAGAGAAGCTGAGCCGTT-TTAACAACTTTGTAGAAGC----AA 332 * ***** * * * ** * * * * * * *** ******* * consensus_11318#0 TGAACTAACTTCCACCATCCACAGCCTTGA-----AAGCAT--GTCAGCGGACCATATCC 307 consensus_11318#2 TGAACTAACTTCCACCATCCACAGCCTTGA-----AAGCAT--GTCAGCGGACCATATCC 406 consensus_11318#1 TTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCA 392 * * ** * * ** * **** ***** ** *** ** * consensus_11318#0 TCCT--TGAGAGTTTTGACCATCTT---CTAGAGCGTTGTTCCTTGAGGCTTGGAG--AA 360 consensus_11318#2 TCCT--TGAGAGTTTTGACCATCTT---CTAGAGCGTTGTTCCTTGAGGCTTGGAG--AA 459 consensus_11318#1 TTTTAGTGGAGGAGCTGGTAATTCCAGCCTACAGGGATATGGCTGAGATGTTGAAGGCAA 452 * * ** * ** ** *** ** * * * ** *** ** ** consensus_11318#0 GAGTTGCAGCACCTGATTGATGCATCTGGCTTCGATACCAACTGCAGCTACCCCAACACC 420 consensus_11318#2 GAGTTGCAGCACCTGATTGATGCATCTGGCTTCGATACCAACTGCAGCTACCCCAACACC 519 consensus_11318#1 CAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGT 512 ** * *** ** * ** ** * *** * * * ** ** consensus_11318#0 AGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAG--CCAGTTAGCA 478 consensus_11318#2 AGGAAAAGCCATGATGATGATGATGATAGGCACACCCTTGTAGCCCAG--CCAGTTAGCA 577 consensus_11318#1 TGTTCAAAGCA--ATGACCA-GGTGAAGTGCTTCTTCTGGGTGCGTTGTGCTAATCTGTG 569 * ** ** **** * * *** ** ** * ** * * * * * consensus_11318#0 ACTTCGACATCATTGTTGATGCTTTACCTGAGG-GCGTA--ATCTTTGA---GGCAAACC 532 consensus_11318#2 ACTTCGACATCATTGTTGATGCTTTACCTGAGG-GCGTA--ATCTTTGA---GGCAAACC 631 consensus_11318#1 -TTATAATGTTTCTCAGGGAGACCAGCCTAAGGTGTGTAGCATCCTTGTTTTAGCCACTT 628 * * * * * * *** *** * *** *** *** ** * consensus_11318#0 GAATTGCAAAGAGGATGGTTGCCGCTGGTTTTGGTGATTCATGTGCTGAGACC-TATGCT 591 consensus_11318#2 GAATTGCAAAGAGGATGGTTGCCGCTGGTTTTGGTGATTCATGTGCTGAGACC-TATGCT 690 consensus_11318#1 GTATTATTTTCACAGTATGTGCTGTAGTGGTTGATGCTTTACTAATTGGGATCATGTGAA 688 * *** * * *** * * *** ** ** * ** ** * * ** consensus_11318#0 TCTTCACGCCTCAACTTCATTGATGAGAGCATTGCACGCCTTGGGGTT--CATGCTCACA 649 consensus_11318#2 TCTTCACGCCTCAACTTCATTGATGAGAGCATTGCACGCCTTGGGGTT--CATGCTCACA 748 consensus_11318#1 CTCTGGAGTCCTAGAGCAACTAATGCTAATATACTACTGCACTGTTTTACCCAGGATTTA 748 * * * * * * *** * ** ** * * ** * * * consensus_11318#0 TGGCAGAGATGTTCAAGTCAGCATCGTGGGAGGAGCTTGAGATTCAAATCATGTGCTGGA 709 consensus_11318#2 TGGCAGAGATGTTCAAGTCAGCATCGTGGGAGGAGCTTGAGATTCAAATCATGTGCT--- 805 consensus_11318#1 TCTTCTTCTCCCTCTGCTCCATATTGTAAGACATTTTAGTTTTCTAAGTCAGACTTCTTA 808 * ** ** ** ** ** * * * ** *** consensus_11318#0 TCCCTGCAATTCGTGTTGTGTTTCACATCTTGATCCCAAGTGAAAGACACCTGTGTGATA 769 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 AACTTTGACCAAAAAAAAGGAAAAAAAAA------------------------------- 837 consensus_11318#0 GCATTTTTGAGGGTTTCACATCCTACAGTGACGTTGCTTTTGTCACTGCGTGTCATCCAT 829 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TTCTCCAACTCCTATCCTTCGGAAATTTTATTGCCGCTGCTGGAAAAAATCCAGAATGTC 889 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TATTCCGCATAGTTGATATGTATGATGCTGTACGTGATATACTTCCTGTTCTTGATGATG 949 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CTTTTAATCCTGAAGTAGCTGCTCTTCGTGAATGCCTCGGATTGTCAATTAAGGCCATCT 1009 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TAATGGCTCTTGAAAACCTAGTACGACGTGATCCAAGTGAGTCTTGTCCACTAGATGGTG 1069 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 GAGTGCATCCAATGACAAGGTATGTGATGAACTACCTTGTGACAGCATGTGTTTCTCGCC 1129 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 ATACTTTGGAAGAAGTGATGCTATTAGAGTTTGGTAGTTCTGATCCTTCTGGAAACTGTC 1189 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CAATAGAACCTGATCGTCCAACATCATCACTGGCAATCCACCTTGCTTGGATTGTGGATG 1249 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TGCTCACGGGAAATCTTGTTTCAAAATCCAAGGTTTATAGCCATGCTCCTCTCAGTTGTG 1309 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TCTTCCTGGTTAACAATGGGATCTATATAATCAAGAAAGTCAATGGTTGTGAACTCAAGG 1369 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TCTTGCTGGGTGAGGATTGGATCAAGGTAATACATTCAAAGGTTAACCAATGGATTTTGG 1429 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 AATACCGACGGGCTACCTGGGGTAAGGCTATCATGATACTTGAGATGGACAAAAGGTTTT 1489 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 GCAGCAACGTGAATGTTATTACAGAGAAGCTGAGCCGTTTTAACAACTTTGTAGAAGCAA 1549 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TTTGCCAAGTGCAGTCACGGTGGGTCTTGGTGGATAAGCAGCAAGGAGTGGATTTTAGCA 1609 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TTTTAGTGGAGGAGCTGGTAATTCCAGCCTACAGGGATATGGCTGAGATGTTGAAGGCAA 1669 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CAGGATCTGCAGGAGAGTCATATATGCGACTTGAGGATGTGAGATCACGAATTCAGCAGT 1729 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TGTTCAAAGCAATGACCAGCCAAATGGTGGAAGACCTGCCAAGCAGAACTGCCTCCCACC 1789 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CAGGCTAAACAGTTCCTGCATTCCAAAGCCTGTGCTATCCGGAGTACACTATCCTGGTAT 1849 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TCACCTATGTTCATCTTCTTCCTCTTTAAGGAACGATAATAACGTGTGAAGTCATTGGTT 1909 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CCTGAGCTGATAAATATCAGGGAGTTCTCTATGATCCTGGAAGCCTCCTCCTCTCCGACG 1969 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 ATGTTCCTGAGCCGGAGGAGGTACTCCTTGAAGAGGTTCACCTGTTTCGACATTGGCAGG 2029 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 GTATTGGACAAGCGTGACGTCTGGTCTTCAAATCCTGAACCAGCCGACGCGAAGTTCACC 2089 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CCGGTCATGATGTCATTGTTGGACAGGTCCTTCTCCAGGAATGGTGGTGAGAATTCTTTG 2149 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 AGCTGCAGCTTCTCATTGAGGAGGTCTGGAACAAGCCGGCCATTGGAGAACCTCCCTGTT 2209 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 GGCTTTCTTCCTGGGAAGTTCCTGCCGTAAGGAGCATGGTTTCCCACAGCCAATGTTGGG 2269 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 ATATAATTGTTGTTGCCGGTGTCGAGAACGGAGTCGCCAAAGTAGAAGATAGCCGAGAAC 2329 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TTTGGCTGAGTTCTCTTGGAGGTGGAAATGGTGGTGGTGGAGGAAAGGAGGAGCACTACT 2389 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 AGGAGTAGAATGGTGTGCGCCATGAGAAGGAACCCCTTGCCTTGGTTTTAATACTCTCCA 2449 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 GACTCCAGTTGGTTCTTTGTTATATTTCCAGGGGGGTAATACATGCCTAATAAATTGGGG 2509 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 AAATATTTAGCTGATTCGCAGTAAGTAATGCATATCTCCCGGATATGTACTATTTAATGT 2569 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 TTTCTTTTGCATGAAACTGCTGTCCTTTTTCTTGACTCGAGTTGGTTGTTTTTGGCAGAA 2629 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CTGGAGATTTTGTATTTACTACTCTACAGTAGATGGTTAGCATGCGATGCAAGCATGTGC 2689 consensus_11318#2 ------------------------------------------------------------ consensus_11318#1 ------------------------------------------------------------ consensus_11318#0 CCT 2692 consensus_11318#2 --- consensus_11318#1 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||