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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11350#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2222 fasta sequence
[TATCGCGTACGACACCCGAGCCGAACCCCCCAACCCGAGGCGGCGGCGGCTGCGGCGGCGGAGGCGAGCGGGATGTACCCGGTGGTGATGGGGCGGCCGCCGGCGAGGCTGCCGGCGTCGACGCGGGTGGACAAGGCGACGAGCCACCTGCTGCAGGGCCCCGACTGGGCCATCAACCTCGAGATATGCGACACCCTCAACGCCGACCGCTGGCAAACAAAGGATGTGGTAAAAGCTGTGAAGAAGCGGTTGCAACATAAAGATCCAAGAGTTCAGTTTTTCACTTTGACGTTGTTGGAGACAATGATGAAGAACTGTGGTGAATATGTCCATTTTGAAGTTGTTGAACAACATATTTTGCAAGAAATGGTTAGAATTGTCCAGAAGAAGCGTGATACTCAAGTGAGGGATAAAGTATTGATACTTCTGGACTCATGGCAAGAAGCATTTGGTGGACCTGGAGGCAAATATCCACAGTATTACTGGTCATACATTGAACTTAAGAGGTCAGGAATAATGTTTCCCAGGCGCCCTGTAGATGCTCCTCCAATATTTACTCCCCCTGCAACACATCATACTCAGTCTTATGGTTCACCTACATATCCTGCTGGAAGTCTAAATGAGAGAATGACATCCGATGTTGAAACTCTGAGTTTAGGGGACTTAAATAATATTAGAGATACAACAGAACTTCTGTGTGATATGGTGAATGCTTTGAATCCTTCTGATCGCATGGCTGTTAAAGATGAAATTATTTCAGAGCTTGTCACCCAATGCCGATCAAATCAACAAAAGCTCATGCGATTTGTCAGTTCCACAGGAAATGAGGAGCTACTGAAGCAAGGCCTAGAAATCAATGATCACTTACAGAGCGTACTTGCAAAACATGATGCCATTGCTTCTGGAGCTCCTTTGCCGGTCGAAACACCAAGGAAAGACGAGATACCCAGAGAAGATCCAAAAATAAAGCCATCTGCACCTCCGATTGCACCTCCATCCGCACCTCCAGTTGAAGAGGATGAAGATGACGAGTTCGCTCAGATAGCAAGAAGAAAAAACAAATCTGTGATAAGTAGTGATGAGGCATCATCCAGTGCTGGTGATCAGGCCCTTGTACCCGTTGACCCAGTAACTTCTGAAGCCTCATCTTCTGTTGCAAGCAATGCAGTGGTGCCTGTTGACTCGTCTCCTGCCAGTGGTACTCGGACAAGAGAGCAGGACATGATCGACCTTCTAAGCCTCACCCTGTACAGCCCCCCTGAAGCATCTACAGATTCTTCTTCACAGACCCAAAATGGCACGCAGCAGTCTGTCACGTCAAATGGGCCAGAATTACCACCAAACTATCAGCCTGCTGCATCAAATGGATCACATTACTCTTCTAACCAGCAGGCATATCCAACGAATCAAGCTTACACCCCATACAACAATTATGTTGTACCTTGGGCCCAAGCTGGACAGGGCACACAGGCTGGAGGAGCATATCAAACTCAGCCCATGCAACAATATGGATCTAGCTACCCAGCACCACCATGGGCGATGCCAGCAAGTGTCAACTCAACCAATCCTTTTCAGCCTGCAACATACCAGATGCAGAACCCTCCTGTTGCTTCTGTTGCCCCCACAAATACCTATCCAGCTCCTTCATCGCCGTATGCTGCTCCGCCAAGGCAACAAGTGCCATCTCCTGCAACCAAACCGATGCAACAGTACAACTCCTTTGTTTCTCAAACAAGAAGTGGTCCGGCAATGGCTCAAGATGTTAGAATGAATGGTAATCCACGGCCATCAGAAACTACAGCGGCTGCGGCCAAACCATACTACATGCCAGACAATTTGTTTGGTGATTTGATTGATGTGAAGAGTTATGGTGGAGGCA-AGATGAGTAGAACGGCGAGCATGCCTAGTCCA-AATGGCAGTGGCCAACCTTTGCTGGGTGGGAAGAAATAGTTCTAGAGTTCCAAGCTAGCTACTACGGTTGTTCCACACGTGTCTATATTTGCTGTTGTATATCTGTTAAGGTTTCGCGTTGGTTACA-TTTGTTAATTTCGTGGTTGCCGCTTGTATTTTAAAAGAGTAGAGCATCATTGCTTGTAAATGATCGATGACATTCATCCGAGGGTGGCTTCTTGCTCGTTTAACTTCACCGCTTTGGTTTGTGAAGTATGTGTATATAATATTCAGCTGATGTGCAGACATTCTCTCATAAAAAAAAAAGCTGA]
[+] EMBL AK065069 [TATCGCGTACGACACCCGAGCCGAACCCCCCAACCCGAGGCGGCGGCGGCTGCGGCGGCGGAGGCGAGCGGGATGTACCCGGTGGTGATGGGGCGGCCGCCGGCGAGGCTGCCGGCGTCGACGCGGGTGGACAAGGCGACGAGCCACCTGCTGCAGGGCCCCGACTGGGCCATCAACCTCGAGATATGCGACACCCTCAACGCCGACCGCTGGCAAACAAAGGATGTGGTAAAAGCTGTGAAGAAGCGGTTGCAACATAAAGATCCAAGAGTTCAGTTTTTCACTTTGACGTTGTTGGAGACAATGATGAAGAACTGTGGTGAATATGTCCATTTTGAAGTTGTTGAACAACATATTTTGCAAGAAATGGTTAGAATTGTCCAGAAGAAGCGTGATACTCAAGTGAGGGATAAAGTATTGATACTTCTGGACTCATGGCAAGAAGCATTTGGTGGACCTGGAGGCAAATATCCACAGTATTACTGGTCATACATTGAACTTAAGAGGTCAGGAATAATGTTTCCCAGGCGCCCTGTAGATGCTCCTCCAATATTTACTCCCCCTGCAACACATCATACTCAGTCTTATGGTTCACCTACATATCCTGCTGGAAGTCTAAATGAGAGAATGACATCCGATGTTGAAACTCTGAGTTTAGGGGACTTAAATAATATTAGAGATACAACAGAACTTCTGTGTGATATGGTGAATGCTTTGAATCCTTCTGATCGCATGGCTGTTAAAGATGAAATTATTTCAGAGCTTGTCACCCAATGCCGATCAAATCAACAAAAGCTCATGCGATTTGTCAGTTCCACAGGAAATGAGGAGCTACTGAAGCAAGGCCTAGAAATCAATGATCACTTACAGAGCGTACTTGCAAAACATGATGCCATTGCTTCTGGAGCTCCTTTGCCGGTCGAAACACCAAGGAAAGACGAGATACCCAGAGAAGATCCAAAAATAAAGCCATCTGCACCTCCGATTGCACCTCCATCCGCACCTCCAGTTGAAGAGGATGAAGATGACGAGTTCGCTCAGATAGCAAGAAGAAAAAACAAATCTGTGATAAGTAGTGATGAGGCGTCATCCAGTGCTGGTGATCAGGCCCTTGTACCCGTTGACCCAGTAACTTCTGAAGCCTCATCTTCTGTTGCAAGCAATGCAGTGGTGCCTGTTGACTCGTCTCCTGCCAGTGGTACTCGGACAAGAGAGCAGGACATGATCGACCTTCTAAGCCTCACCCTGTACAGCCCCCCTGAAGCATCTACAGATTCTTCTTCACAGACCCAAAATGGCACGCAGCAGTCTGTCACGTCAAATGGGCCAGAATTACCACCAAACTATCAGCCTGCTGCATCAAATGGATCACATTACTCTTCTAACCAGCAGGCATATCCAACGAATCAAGCTTACACCCCATACAACAATTATGTTGTACCTTGGGCCCAAGCTGGACAGGGCACACAGGCTGGAGGAGCATATCAAACTCAGCCCATGCAACAATATGGATCTAGCTACCCAGCACCACCATGGGCGATGCCAGCAAGTGTCAACTCAACCAATCCTTTTCAGCCTGCAACATACCAGATGCAGAACCCTCCTGTTGCTTCTGTTGCCCCCACAAATACCTATCCAGCTCCTTCATCGCCGTATGCTGCTCCGCCAAGGCAACAAGTGCCATCTCCTGCAACCAAACCGATGCAACAGTACAACTCCTTTGTTTCTCAAACAAGAAGTGGTCCGGCAATGGCTCAAGATGTTAGAATGAATGGTAATCCACGGCCATCAGAAACTACAGCGGCTGCGGCCAAACCATACTACATGCCAGACAATTTGTTTGGTGATTTGATTGATGTGAAGAGTTATGGTGGAGGCA AGATGAGTAGAACGGCGAGCATGCCTAGTCCA AATGGCAGTGGCCAACCTTTGCTGGGTGGGAAGAAATAGTTCTAGAGTTCCAAGCTAGCTACTACGGTTGTTCCACACGTGTCTATATTTGCTGTTGTATATCTGTTAAGGTTTCGCGTTGGTTACA TTTGTTAATTTCGTGGTTGCCGCTTGTATTTTAAAAGAGTAGAGCATCATTGCTTGTAAATGATCGATGACATTCATCCGAGGGTGGCTTCTTGCTCGTTTAACTTCACCGCTTTGGTTTGTGAAGTATGTGTATATAATATTCAGCTGATGTGCAGACATTCTCTCATATATTGCCAAGCTGA]
[+] EMBL OSS14889A [ TCAGTTCCACAGGAAATGAGGAGCTACTGAAGCAAGGCCTAGAAATCAATGATCACTTACAGAGCGTACTTGCAAAACATGATGCCATTGCTTCTGGAGCTCCTTTGCCGGTCGAAACACCAAGGAAAGACGAGATACCCAGAGAAGATCCAAAAATAAAGCCATCTGCACCTCCGATTGCACCTCCATCCGCACCTCCAGTTGAAGAGGATGAAGATGACGAGTTCGCTCAGATAGCAAGAAGAAAAAACAAATCTGTGATAAGTAGTGATGAGGCATCATCCAGTGCTGGTGATCAGGCCCTTGTACCCGTTGACCCAGTAACTTCTGAAGCCTCATCTTCTGTTGCAAGCAATGCAGTGGTGNCTGTTGACTCGTCTCCTGCCAGTGGTACTCGGACAAGAGAGCAGGACATTGTCGACCTTCTAAG CTCACCCTt ]
[+] EMBL CF309037 [ AATGAGGAGCTACTGAAGCGAGGCCTAGAAATCAATGATCACTTACAGAGCGTACTTGCAAAACATGATGCCATTGCTTCTGGAGCTCCTTTGCCGGTCGAAACACCAAGGAAAGACGAGATACCCAGAGAAGATCCAAAAATAAAGCCATCTGCACCTCCGATTGCACCTCCATCCGCACCTCCAGTTGAAGAGGATGAAGATGACGAGTTCGCTCAGATAGCAAGAAGAAAAAACAAATCTGTGATAAGTAGTGATGAGGCATCATCCAGTGCTGGTGATCAGGCCCTTGTACCCGTTGACCCAGTAACTTCTGAAGCCTCATCTTCTGTTGCAAGCAATGCAGTGGTGCCTGTTGACTCGTCTCCTGCCAGTGGTACTCGGACAAGAGAGCAGGACATGATCGACCTTCTAAGCCTCACCCTGTACAGCCCCCCTGAAGCATCTACAGATTCTTCTTCACAGACCCAAAATGGCACGCAGCAGTCTGTCACGTCAAATGGGCCAGAATTACCACCAAACTATCAGCCTGCTGCATCAAATGGATCACATTACTCTTCTAACCAGCAGGCATATCCAACGAATCAAGCTTACACCCCATACAACAATTATGTTGTACCTTGGGCCCAAGCTGGACAGGGCACACAGGCTGGAGGAGCATATCAAA ]
[+] EMBL CF305080 [ GAAAGACGAGATACCCAGAGAAGATCCAAAAATAAAGCCATCTGCACCTCCGATTGCACCTCCATCCGCACCTCCAGTTGAAGAGGATGAAGATGACGAGTTCGCTCAGATAGCAAGAAGAAAAAACAAATCTGTGATAAGTAGTGATGAGGCATCATCCAGTGCTGGTGATCAGGCCCTTGTACCCGTTGACCCAGTAACTTCTGAAGCCTCATCTTCTGTTGCAAGCAATGCAGTGGTGCCTGTTGACTCGTCTCCTGCCAGTGGTACTCGGACAAGAGAGCAGGACATGATCGACCTTCTAAGCCTCACCCTGTACAGCCCCCCTGAAGCATCTACAGATTCTTCTTCACAGACCCAAAATGGCACGCAGCAGTCTGTCACGTCAAATGGGCCAGAATTACCACCAAACTATCAGCCTGCTGCATCAAATGGATCACATTACTCTTCTAACCAGCAGGCATATCCAACGAATCAAGCTTACACCCCATACAACAATTATGTTGTACCTTGGGCCCAAGCTGGACAGGGCACACAGGCTG ]
[-] EMBL CB644983 [ AATTATGTTGTACCTTGGGCCCAAGCTGGACAGGGCACACAGGCTGGAGGAGCATATCAAACTCAGCCCATGCAACAATATGGATCTAGCTACCCAGCACCACCATGGGCGATGCCAGCAAGTGTCAACTCAACCAATCCTTTTCAGCCTGCAACATACCAGATGCAGAACCCTCCTGTTGCTTCTGTTGCCCCCACAAATACCTATCCAGCTCCTTCATCGCCGTATGCTGCTCCGCCAAGGCAACAAGTGCCATCTCCTGCAACCAAACCGATGCAACAGTACAACTCCTTTGTTTCTCAAACAAGAAGTGGTCCGGCAATGGCTCAAGATGTTAGAATGAATGGTAATCCACGGCCATCAGAAACTACAGCGGCTGCGGCCAAACCATACTACATGCCAGACAATTTGTTTGGTGATTTGATTGATGTGAAGAGTTATGGTGGAGGCA AGATGAGTAGAACGGCGAGCATGCCTAGTCCA AATGGCAGTGGCCAACCTTTGCTGGGTGGGAAGAAATAGTTCTAGAGTTCCAAGCTAGCTACTACGGTTGTTCCACACGTGTCTATATTTGCTGTTGTATATCTGTTAAGGTTTCGCGTTGGTTACA TTTGTTAATTTCGTGGTTGCCGCTTGTATTTTAAAAGAGTAGAGCATCATTGCTTGTAAATGATCGATGACATTCATCCGAGGGTGGCTTCTTGCTCGTTTAACTTCACCGCTTTGGTTTGTGAAGTATGTGTATATAATGTTCAGCTGATGTGCAGACATTCTCTCATAAAAAATAAAa ]
[+] EMBL AU089768 [ AGCACCACCATGGGCGATGCCAGCAAGTGTCAACTCAACCAATCCTTTTCAGCCTGCAACATACCAGATGCAGAACCCTCCTGTTGCTTCTGTTGCCCCCACAAATACCTATCCAGCTCCTTCATCGCCGTATGCTGCTCCGCCAAGGCAACAAGTGCCATCTCCTGCAACCAAACCGATGCAACAGTACAACTCCTTTGTTTCTCAAACAAGAAGTGGTCCGGCAATGGCTCAAGATGTTAGAATGAATGGTAATCCACGGCCATCAGAAACTACAGCGGCTGCGGCCAAACCATACTACATGCCAGACAATTTGTTTGGTGATTTGATTGATGTGAAGAGTTATGGTGGAGGCA AGATGAGTAGAACGGCGAGCATGCCTAGTCCA AATGGCAGTGGCCAACCTTTGCTGGGTGGGAAGAAATAGTTCTAGAGTTCCAAGCTAGCTACTACGGTTGTTCCACACGTGTCTATATTTGCTGTTGTATATCTGTTAAGGTTTCGCGTTGGTTACA TTTGTTAATTTCGTGGTTGCCGCTTGTATTTTAAAAGAGTAGAGCATCATTGCTTGTAAATGATCGATGACATTCATCCGAGGGTGGCTTCTTGCTCGTTTAACTTCACCGCTTTGGTTTGTGAAGTATGTGTATATAATATTCAGCTGATGTGCAGACATTCTCTCAAAAAAAA ]
[+] EMBL BM038123 [ TACAGC GCTGCGGCC AACCATACTACATGCCAGACCATTTGTTTGGTGATTTGATTGATGTGAAGAATTATGGTGGAGGCACAGATGAGTAGAACGGCGAGCATGCCTAGTCCACAATGGCAGTGGCCAACCTTTGCTGGGTGGGAAGAAATAGTTCTAGAGTTCCAAGCTAGCTACTACGGTTGTTCCACACGTGTCTATATTTGCTGTTGTATATCTGTTAAGGTTTCGCGTTGGTTACACTTGGTTAATTTCGTGGTTGCCGCTTGTATTTTAAAAGAGTAGAGCATCATTGCTTGTAAATGATCGATGACATTCATCCGAGGGTGGCTTCTTGCTCGTTTAACTTCACCGCTTTGGTTTGTGAAGTATGTGTATATAATATTCAGCTGATGTCCAGACATTCTCTCATAAAAAAAAAA ]
[+] EMBL BM038243 [ TACAGCGGCTGCGGCCAAACCATACTACATGCCAGACAATTTGTTTGGTGATTTGATTGATGTGAAGAATTATGGTGGAGGCA AGATGAGTAGAACGGCGAGCATGCCTAGTCCA AATGGCAGTGGCCAACCTTTGCTGGGTGGGAAGAAATAGTTCTAGAGTTCCAAGCTAGCTACTACGGTTGTTCCACACGTGTCTATATTTGCTGTTGTATATCTGTTAAGGTTTCGCGTTGGTNACA TTGNNTAATTTCGTGGTTGCCGCTTGTATTTTAAAAGAGTAGAGCATCATTGCTTGTAAATGATCGATGACATTCATCCGAGGGTGGCTTCTTGCTCGTTTAACTTCACCGCTTTGGTTTGTGAAGTATGTGTATATAATATTCAGCTNAT CCCAGACATTCTCTCATAAAAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||