These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11365#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1416 fasta sequence [AAAGATCACACGGTCTCGTTCTCGCCGCCTATATGTAGCGCCACCGATTCCCCATGAACCATTCAAGTGTTTGTACTTGGCTTTGCTGGCCTGTTTCTGTTTTGATTACTCGAGCTCCAGAGCACAGCAGCAGAGAGACGCGAGCTGTTCGTGGTCGTCGTCGTCGTCGATGGACGCGGCGTGGCGCGGCGGCGTTGGCTGCTCGCCGGTCTGCCTCGACCTCTGCGTCGGGCTGTCGCCGGTGCGGGAGCCGTCGGCGGCGAGGCACGAGCTGCTTGACCGGCCGGCCGGCTGCCGCGGCGGTGGGGATTCCAAGTCGATGACCAATGACGAGGCGAAGATCGTCGAGGCGAAGGTCACTCAGATGAGCGAGGAGAATCGGCGGCTGACCGAGGTGATCGCCCGCCTGTACGGCGGCCAAATCCCGCGGCTCGGCCTCGACGGCTCGGCCTCGCCGCCGCGGCCGGTGTCGCCGTTATCGGGCAAGAAGAGGAGCAGGGAGAGCATGGAGACGGCGAATTCCTGCGACGCCAACAGCAACAGGCATCAGGGCGGCGACGCCGACCACGCCGAGAGCTTCGCCGCCGACGATGGCACCTGCCGGAGGATCAAGGTCAGCCGGGTGTGCAGGCGGATCGACCCGTCGGACACCTCCCTGGTGGTCAAGGACGGGTACCAATGGCGGAAGTACGGGCAGAAGGTGACGCGCGACAACCCGTCGCCGAGGGCCTACTTCCGGTGCGCCTTCGCGCCATCGTGCCCGGTG-AAGAAGAAGGTGCAGCGGAGCGCGGAGGACAGCTCGCTGCTGGTGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCGTCTCCGCGCGCCGGCGAGCTCCCGGCGGCGGCGGGGGGGGCCGGTGGC-TCGCTGCCGTGCTCCATCTCCA-TCAAC-TCCTCCGGCCCGACCA-TCAC-GCTCGACC-TCACCAAGAACGGGGGAGCC-GTGCAGGTGG-TCGAGGCGGCGCATCCGCCGCCGCCGCC-GGACCTCAAGGAGGTGTGCCGGGAGGTCGCGTCGCCGGAGTTCCGGACCGCGCTGGTGGAGCAGATGGCCAGCGCGCTCACCAGCGACCCCAAGTTCACCGGCGCGCTCGCCGCGGCGATCCTCCAGAAGCTGCCCGAATTCTAGCTTCCTTTACAATTCTCCAATTCTTCTTACAGGAAAAAACATAGAGGCGCATTTCAATAGAGATTAGAGCTTAATCTCCCCCCAATTTGAAAATTTTATACAGGGTAAGAATTCCGAATGCTTTTCTGCTGCTTTTAGGATGTGAATTGTACTCTCTCATAATAACCTGTTGGTCCTTGGGCCGTCGGAAGAAGATTGCGGGCTTCTATCGGGCCTCACGATCCTGAGCCCCATTGCGAGGCTCCTTGAGCTTAAAAAAAAAA] [+] EMBL AK059966 [AAAGATCACACGGTCTCGTTCTCGCCGCCTATATGTAGCGCCACCGATTCCCCATGAACCATTCAAGTGTTTGTACTTGGCTTTGCTGGCCTGTTTCTGTTTTGATTACTCGAGCTCCAGAGCACAGCAGCAGAGAGACGCGAGCTGTTCGTGGTCGTCGTCGTCGTCGATGGACGCGGCGTGGCGCGGCGGCGTTGGCTGCTCGCCGGTCTGCCTCGACCTCTGCGTCGGGCTGTCGCCGGTGCGGGAGCCGTCGGCGGCGAGGCACGAGCTGCTTGACCGGCCGGCCGGCTGCCGCGGCGGTGGGGATTCCAAGTCGATGACCAATGACGAGGCGAAGATCGTCGAGGCGAAGGTCACTCAGATGAGCGAGGAGAATCGGCGGCTGACCGAGGTGATCGCCCGCCTGTACGGCGGCCAAATCCCGCGGCTCGGCCTCGACGGCTCGGCCTCGCCGCCGCGGCCGGTGTCGCCGTTATCGGGCAAGAAGAGGAGCAGGGAGAGCATGGAGACGGCGAATTCCTGCGACGCCAACAGCAACAGGCATCAGGGCGGCGACGCCGACCACGCCGAGAGCTTCGCCGCCGACGATGGCACCTGCCGGAGGATCAAGGTCAGCCGGGTGTGCAGGCGGATCGACCCGTCGGACACCTCCCTGGTGGTCAAGGACGGGTACCAATGGCGGAAGTACGGGCAGAAGGTGACGCGCGACAACCCGTCGCCGAGGGCCTACTTCCGGTGCGCCTTCGCGCCATCGTGCCCGGTG AAGAAGAAGGTGCAGCGGAGCGCGGAGGACAGCTCGCTGCTGGTGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCGTCTCCGCGCGCCGGCGAGCTCCCGGCGGCGGCGGGGGGGGCCGGTGGC TCGCTGCCGTGCTCCATCTCCA TCAAC TCCTCCGGCCCGACCA TCAC GCTCGACC TCACCAAGAACGGGGGAGCC GTGCAGGTGG TCGAGGCGGCGCATCCGCCGCCGCCGCC GGACCTCAAGGAGGTGTGCCGGGAGGTCGCGTCGCCGGAGTTCCGGACCGCGCTGGTGGAGCAGATGGCCAGCGCGCTCACCAGCGACCCCAAGTTCACCGGCGCGCTCGCCGCGGCGATCCTCCAGAAGCTGCCCGAATTCTAGCTTCCTTTACAATTCTCCAATTCTTCTTACAGGAAAAAACATAGAGGCGCATTTCAATAGAGATTAGAG ] [+] EMBL AK068337 [ GTACTTGGCTTTGCTGGCCTGTTTCTGTTTTGATTACTCGAGCTCCAGAGCACAGCAGCAGAGAGACGCGAGCTGTTCGTGGTCGTCGTCGTCGTCGATGGACGCGGCGTGGCGCGGCGGCGTTGGCTGCTCGCCGGTCTGCCTCGACCTCTGCGTCGGGCTGTCGCCGGTGCGGGAGCCGTCGGCGGCGAGGCACGAGCTGCTTGACCGGCCGGCCGGCTGCCGCGGCGGTGGGGATTCCAAGTCGATGACCAATGACGAGGCGAAGATCGTCGAGGCGAAGGTCACTCAGATGAGCGAGGAGAATCGGCGGCTGACCGAGGTGATCGCCCGCCTGTACGGCGGCCAAATCCCGCGGCTCGGCCTCGACGGCTCGGCCTCGCCGCCGCGGCCGGTGTCGCCGTTATCGGGCAAGAAGAGGAGCAGGGAGAGCATGGAGACGGCGAATTCCTGCGACGCCAACAGCAACAGGCATCAGGGCGGCGACGCCGACCACGCCGAGAGCTTCGCCGCCGACGATGGCACCTGCCGGAGGATCAAGGTCAGCCGGGTGTGCAGGCGGATCGACCCGTCGGACACCTCCCTGGTGGTCAAGGACGGGTACCAATGGCGGAAGTACGGGCAGAAGGTGACGCGCGACAACCCGTCGCCGAGGGCCTACTTCCGGTGCGCCTTCGCGCCATCGTGCCCGGTG AAGAAGAAGGTGCAGCGGAGCGCGGAGGACAGCTCGCTGCTGGTGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCGTCTCCGCGCGCCGGCGAGCTCCCGGCGGCGGCGGGGGGGGCCGGTGGC TCGCTGCCGTGCTCCATCTCCA TCAAC TCCTCCGGCCCGACCA TCAC GCTCGACC TCACCAAGAACGGGGGAGCC GTGCAGGTGG TCGAGGCGGCGCATCCGCCGCCGCCGCC GGACCTCAAGGAGGTGTGCCGGGAGGTCGCGTCGCCGGAGTTCCGGACCGCGCTGGTGGAGCAGATGGCCAGCGCGCTCACTAGCGACCCCAAGTTCACCGGCGCGCTCGCCGCGGCGATCCTCCAGAAGCTGCCCGAATTCTAGCTTCCTTTACAATTCTCCAATTCTTCTTACAGGAAAAAACATAGAGGCGCATTTCAATAGAGATTAGAG ] [+] EMBL CA753232 [ TTCTGTTTTGATTACTCGAGCTCCAGAGCACAGCAGCAGAGAGACGCGAGCTGTTCGTGGTCGTCGTCGTCGTCGATGGACGCGGCGTGGCGCGGCGGCGTTGGCTGCTCG ] [+] EMBL CA753145 [ CGCCGGTGCGGGAGCCGTCGGCGGCGAGGCACGAGCTGCTTGACCGGCCGGCCGGCTGCCGCGGCGGTGGGGATTCCAAGTCGATGACCAATGACGAGGCGAAGATCCTCGAGGCGAAGGTCACTCAGATGAGCGAGGAGAATCGGCGGCTGACCGAGGTGATCGCCCGCCTGTACGGCGGCCAAATCGCGCGGCTCGGCCTCGACGGCTCGGCCTCGCCGCCGCGGCCGGTGTCGCCGTTATCGGGCAAGAAGAGGAGCAGGGAGAGCATGGAGACGGCGAATTCCTGCGACGCCAACAGCAACAGGCATCAGGGCGGCGACGCCGACCACGCCGAGAGCTTCGCCGCCGACGATGGCACCTGCCGGAGGATCAAGGTCAGCCGGGTGTGCAGGCGGATCGACCCGTCGGACACCTCCCTGGTGGTCAAGGACGGGTACCAATGGCGGAAGTACGGGCAGAAGGTGACGCGCGACAACCCGTCGCCGAGGGCCTACTTCCGGTGCGCCTT ] [+] EMBL AY323479 [ GAGGCGAAGATCCTCGAGGCGAAGGTCACTCAGATGAGCGAGGAGAATCGGCGGCTGACCGAGGTGATCGCCCGCCTGTACGGCGGCCAAATCCCGCGGCTCGGCCTCGACGGCTCGGCCTCGCCGCCGCGGCCGGTGTCGCCGTTATCGGGCAAGAAGAGGAGCAGGGAGAGCATGGAGACGGCGAATTCCTGCGACGCCAACAGCAACAGGCATCAGGGCGGCGACGCCGACCACGCCGAGAGCTTCGCCGCCGACGATGGCACCTGCCGGAGGATCAAGGTCAGCCGGGTGTGCAGGCGGATCGACCCGTCGGACACCTCCCTGGTGGTCAAGGACGGGTACCAATGGCGGAAGTACGGGCAGAAGGTGACGCGCGACAACCCGTCGCCGAGGGCCTACTTCCGGTGCGCCTTCGCGCCATCGTGCCCGGTG AAGAAGAAGGTGCAGCGGAGCGCGGAGGACAGCTCGCTGCTGGTGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCGTCTCCGCGCGCCGGCGAGCT CCGGCGGCGGCGGGGGGGGCCGGTGGCTTCG TTCCGTGCTCCATTTCCATTAAACTTCCTCGGGCCCGACCATTCACGGTTGGACCTTCACCAAGAACGGGGAACCCGGTGCACCTGGTTCAAGGGGGGGCATCCGCCGCCGCCGCC GGACCTCAAGAAGGTGTGCCGGAAGGTCGCGTCGCCGGACTTCCGGACCGCGCTGGTGGAGCAGATGGCCAGCGCGCTCACCAGCGACCCCAAGTTCACCGGCGCGCTCGCCGCGGCGATCCTCCACAAGCTGCCCGAATTCTAGCTTCCTTTACAATTCTCCAATTCTTCTTACAGGAAAAAACATAGAGGCGCATTTC ATAGAGATTAGAG ] [+] EMBL AF467736 [ cttcAGGCGAAGATCGTCGAGGCGAAGGTCACTCAGATGAGCGAGGAGAATCGGCGGCTGACCGAGGTGATCGCCCGCCTGTACGGCGGCCAAATCCCGCGGCTCGGCCTCGACGGCTCGGCCTCGCCGCCGCGGCCGGTGTCGCCGTTATCGGGCAAGAAGAGGAGCAGGGAGAGCATGGAGACGGCGAATTCCTGCGACGCCAACAGCAACAGGCATCAGGGCGGCGACGCCGACCACGCCGAGAGCTTCGCCGCCGACGATGGCACCTGCCGGAGGATCAAGGTCAGCCGGGTGTGCAGGCGGATCGACCCGTCGGACACCTCCCTGGTGGTCAAGGACGGGTACCAATGGCGGAAGTACGGGCAGAAGGTGACGCGCGACAACCCGTCGCCGAGGGCCTACTTTCGGTGCGCCTTCGCGCCATCGTGCCCGGTGAAAGAAAAAGGTGCAGCGGAGCGCGGAGGACAGCTCGCTG TGGTGGCGACGTACGAAGGCGAagc ] [+] EMBL AU197741 [ GCACCCGTCTCCGCGCGCCGGCGAGCTCCCGGCGGCGGCGGGGGGGGCCGGTGGC TCGCTGCCGTGCTCCATCTCCA TCAAC TCCTCCGGCCCGACCA TCAC GCTCGACC TCACCAAGAACGGGGGANCC GTGCAGGTGG TCGAGGCGGCGCATCCGCCGCCGCCGCC GGACCTCAAGGAGGTGTGCCGGGAGGTCGCGTCGCCGGAGTTCCGGACCGCGCTGGTGGAGCAGATGGCCAGCGCGCTCACCAGCGACCCCAAGTTCACCGGCGCGCTCGCCGCGGCGATCCTCCAGAAGCTGCCCGAATTCTAGCTTCCTTTACAATTCTCCAATTCTTCTTACAGGAAAAAACATAGAGGCGCATTTCAATAGAGATTAGAG ] [+] EMBL BI813446 [ A TCAC GCTCGACC TCACCAAGAACGGGGGA CC GTGCAGGT G TCGA GCGGCGCATCC CC CCGCCGCCAGGACCTCAAGGAGGTGT CCGGGA GTCGCGTCGCCGGAGTTCCGGACCGCGCTGGTGGAGCAGATGGCCAGCGCGCTCACCAGCGACCCCAAGTTCACCGGCGCGCTC CC C GCGATCCTCCAGAAGCTGCCCGAATTCTAGCTTCCTTTACAATTCTCCAATTCTTCTTACAGGAAAAAACATAGAGGCGCATTTCAATAGAGATTAGAGCTTAATCTCCCCCCAATTTGAAAATTTTATACAGGGTAAGAATTCCGAATGCTTTTCTGCTGCTTTTAGGATGTGAATTGTACTCTCTCATAATAACCTGTTGGTCCTTGGGCCGTCGGAAGAAGATTGCGGGCTTCTATCGGGCCTCACGATCCTGAGCCCCATTGCGAGGCTCCTTGAGCTTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||