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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11368#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 4576 fasta sequence
[TCGAATGGAAAGAAAGCGCAAACATAGCGAGGAAGTGAAGATTGCAAAGGAAGTTGAGGCTCATGAAAAACGAATCAGAAAGGAGCTCGAGAAGCAAGATATGTTGAACAGAAAGAGAGAAGAACAAGTGCGGAGGGAAATGGAGAGAAATGATCGTGAAAGAAGGAAAGAAGAGGAGAGGTTGTTGCGTGAAAAGCAGAAGGAAGAAGAGAGATTCCAAAGGGAACAAAGGCGTGAACACAAGCGAATGGAAAAATATTTGCTGAAGCAGTCCTTAAGAGCTGAAAAAATAAGACAAAAGGAGGAGCTTCGTAAGGAGAAAGAAGCCGCAAGGCAGAAGGCTGCCAATGAAAGGGCTACAGCACGTAGAATTGCACGGGAGTATATGGAGCTCATGGAAGATGAGCGCCTAGAACTAATGGAACTGGTTTCACGAAGCAAAGGGTTGCCCTCTATGCTATCTCTTGATAGCGACACGTTGCAGCAGCTTGATTCATTCAGAGGAATGCTGAGACAATTTCCTAGTGAAATTGTGAGATTGAAGGTGCCATTTTCAATAAAACCATGGACAAGCTCTGAAGATAATATTGGAAACCTTTTGATGGTGTGGAAGTTCTTCATTACCTTTGCGGATGTTCTTGGGATTCCGTCATTCACGCTTGATGAGTTTGTGCAGTCTCTTCATGATTATGATTCAAGGTTGTTGGGAGAATTGCATGTTGCTATGCTGAAATCCATAATAAAAGATATTGAGGATGTTGCCCGGACTCCTTCAGTTGCTTCAGGGATGACTGCTAATCCTGGAGGTGGTCATCCACAAATTGTTGAAGGGGCATACGATTGGGGCTTCAACATACTTGCCTGGCAGCGACACTTGAATTTGCTTACATGGCCTGAAATATTGCGCCAGTTTGGTTTATCTGCTGGTCTTGGACCACAGTTAAGGAAAAGGAATGCTGAAAATGTCAATAATCATGATGATAATGAGGGTCGTAATGGTGAGGATGTTATTTCCATACTGAGAAGTGGCTCAGCAGCTGTAAATGCTGCTGCTAAAATGAAAGAAAGAGGCTACGGTAATCGCCGCAGGTCTCGACACCGTCTGACACCTGGAACTGTAAAGTTTGCTGCGTTCCATGTGTTGTCACTTGAAGGGAGCCAAGGTCTCACGATATTGGAAGTTGCAGAAAAAATACAGAAATCTGGACTGAGAGACCTTACAACAAGCAAGACACCTGAGGCATCTATATCTGCTGCACTGTCAAGGGATTCAAAGCTTTTCGAAAGGACTGCACCTTCAACATACTGTGTTAAAACTCCATACAGAAAAGATCCTGCTGATTCAGAGGCTGTGTTGGCAGCAGCACGTGAAAAAATAAGGGTGTTTCAGAACACTATTTCTGAGTGTGAAGAAGTGGAGAAGGATGTGGATGATGCTGAGAGGGATGAAGATTCTGAGTGTGATGATGCTGACGATGATCCTGATGGTGATGAAGTGAATATTGAGGAAAAAGATGTCAAGACTTCCCTGGTTAAGGCACAAGATGGTGGCATGCCAACTGCAGTTGGTGACATAAAGAAGGAAACAAATAGCATAGTTAACTCATTAACGACACCACTCATCCACACTAAATCTTCTGAGAGTAGCTCATTGCGCACTCTGGACAAGTCTGTACAAGTCCGTACTACAAGTGATCTACCAGCTGAAATCTCATCGGATAATCATGAAGGTGCTTCCGACAGTGCTCAAGACGCAGAGATTGACGAAAGTAACCAGGGGGAGTCCTGGGTACAGGGGCTAGCGGAGGGTGACTACTGTGATCTCAGTGTTGAGGAGCGCCTCAATGCATTGGTTGCATTGATTGGTGTTGCCACTGAAGGAAATTCTATACGTGCAGTTCTTGAGGAACGGCTGGAGGCAGCAAGTGCTTTGAAAAAGCAAATGTGGGCAGAAGCACAACTTGATAAAAGACGTTCGAGGGAGGAATTTTCTAGTAAAATGCAATATGATTCTGGTATGGGTTTAAAGACCGATGTAGATCAACAAAATACTCTCGCCGAAAGTAATCTTACACCGGTGCATAACCTTGTTAAAGACAGTAATGGAAATGGCAGCTTAGTAAACAACGAGTTGCCTGTCGATCAGCAGAGTCAGCCTAATGCTTGCAGCGTGGTTCATGAAAGGAACGGTGTAAGGCAGGAATTTAGTGCTAATCCAGAAAATTTGTCTGGTCAACAATATGTTACATCTGAGAAAACAAGATCTCAGTTGAAATCATATATAGGCCACAAAGCAGAACAACTTCATGTATACAGATCACTACCCCTCGGGCAAGATCGGAGAAGAAACCGGTACTGGCAGTTTTCAACTTCTGCATCCCCCGATGACCCTGGTTCTGGAAGGATCTTTTTTGAATCTAGAGATGGATACTGGAGGCTGATTGACTCAATTGAGACTTTTGATGCATTAGTATCTTCTCTTGATACTCGTGGCATCCGTGAGTCACATCTTCATTCAATGTTGCAAAGCATTGAACCAACCTTCAAGGAAGCTATTGGGAGGAAAAGGTGTGCCAGCATAGAACCGTCGGCCGGAAGGGTTTTGAAAAATGGAACTAGTGAGATCATAAGTCCGAATCATAGTAACGAGTTTGGAAGTCCATGCAGTACCCTTTCTGGTGTTGCAACCGATAGTGCTATGGCATATTCAGATTCCTTCAGGATAGAACTTGGGCGTAATGATGTTGAAAAGACTGCAATTTCAGAAAGGGCTGATCTGTTTGTAAAGTGGATGTGGAAAGAATGCAACAATCACCAACCAACATGTGCCATGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTTCTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAAATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCCTAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCTGCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGATGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTTTGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGAGACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCCACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTTAAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAGGTGGG-ATCAAACAAGGAGCGGGGAGCTGGAGAGTTCATGAAGCTTCCGCCAAGATATACTCCTGCTAAGACCAAACAAGAAACTGAACCTATGGGAACAGGTTTTGATCGACAAGAAACATGGCTAACTCCAAGCAACGGACGAGGCGGTCGGGGTGGCCGTGGACGAGGTAGTCGAGGCGGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCTAAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTGGGGCTTGGAGAGAAGGCCGTCATATGTCAAGGATGATGAGGACAATTCAGCTTCTCAGTCAGAGGAATCGAGTGAGGAAAATAGTGAACCCATGAACGAGGAGTACGATGAGCTGCTCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGAGTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACTACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATGTCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATGAAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTGGCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAGCTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTGGTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCCCGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAGGAGGGGAAGCCCGATAAAATCCCATCCAATAAAAAAAAAGAAAAA]
[+] EMBL AU166350 [TCGAATGGAAAGAAAGCGCAAACATAGCGAGGAAGTGAAGATTGCAAAGGAAGTTGAGGCTCATGAAAAACGAATCAGAAAGGAGCTCGAGAAGCAAGATATGTTGAACAGAAAGAGAGAAGAACAAGTGCGGAGGGAAATGGAGAGAAATGATCGTGAAAGAAGGAAAGAAGAGGAGAGGTTGTTGCGTGAAAAGCAGAAGGAAGAAGAGAGATTCCAAAGGGAACAAAGGCGTGAACACAAGCGAATGGAAAAATATTTGCTGAAGCAGTCCTTAAGAGCTGAAAAAATAAGACAAAAGGAGGAGCTTCGTAAGGAGAAAGAAGCCGCAAGGCAGAAGGCTGCCAATGAAAGGGCTACAGCACGTAGAATTGCACGGGAGTATATGGAGCTCATGGAAGATGAGCGCCTAGAACTAATGGAACTGGTTTCAC ]
[+] EMBL AK121237 [ TGTTGAACAGAAAGAGAGAAGAACAAGTGCGGAGGGAAATGGAGAGAAATGATCGTGAAAGAAGGAAAGAAGAGGAGAGGTTGTTGCGTGAAAAGCAGAAGGAAGAAGAGAGATTCCAAAGGGAACAAAGGCGTGAACACAAGCGAATGGAAAAATATTTGCTGAAGCAGTCCTTAAGAGCTGAAAAAATAAGACAAAAGGAGGAGCTTCGTAAGGAGAAAGAAGCCGCAAGGCAGAAGGCTGCCAATGAAAGGGCTACAGCACGTAGAATTGCACGGGAGTATATGGAGCTCATGGAAGATGAGCGCCTAGAACTAATGGAACTGGTTTCACGAAGCAAAGGGTTGCCCTCTATGCTATCTCTTGATAGCGACACGTTGCAGCAGCTTGATTCATTCAGAGGAATGCTGAGACAATTTCCTAGTGAAATTGTGAGATTGAAGGTGCCATTTTCAATAAAACCATGGACAAGCTCTGAAGATAATATTGGAAACCTTTTGATGGTGTGGAAGTTCTTCATTACCTTTGCGGATGTTCTTGGGATTCCGTCATTCACGCTTGATGAGTTTGTGCAGTCTCTTCATGATTATGATTCAAGGTTGTTGGGAGAATTGCATGTTGCTATGCTGAAATCCATAATAAAAGATATTGAGGATGTTGCCCGGACTCCTTCAGTTGCTTCAGGGATGACTGCTAATCCTGGAGGTGGTCATCCACAAATTGTTGAAGGGGCATACGATTGGGGCTTCAACATACTTGCCTGGCAGCGACACTTGAATTTGCTTACATGGCCTGAAATATTGCGCCAGTTTGGTTTATCTGCTGGTCTTGGACCACAGTTAAGGAAAAGGAATGCTGAAAATGTCAATAATCATGATGATAATGAGGGTCGTAATGGTGAGGATGTTATTTCCATACTGAGAAGTGGCTCAGCAGCTGTAAATGCTGCTGCTAAAATGAAAGAAAGAGGCTACGGTAATCGCCGCAGGTCTCGACACCGTCTGACACCTGGAACTGTAAAGTTTGCTGCGTTCCATGTGTTGTCACTTGAAGGGAGCCAAGGTCTCACGATATTGGAAGTTGCAGAAAAAATACAGAAATCTGGACTGAGAGACCTTACAACAAGCAAGACACCTGAGGCATCTATATCTGCTGCACTGTCAAGGGATTCAAAGCTTTTCGAAAGGACTGCACCTTCAACATACTGTGTTAAAACTCCATACAGAAAAGATCCTGCTGATTCAGAGGCTGTGTTGGCAGCAGCACGTGAAAAAATAAGGGTGTTTCAGAACACTATTTCTGAGTGTGAAGAAGTGGAGAAGGATGTGGATGATGCTGAGAGGGATGAAGATTCTGAGTGTGATGATGCTGACGATGATCCTGATGGTGATGAAGTGAATATTGAGGAAAAAGATGTCAAGACTTCCCTGGTTAAGGCACAAGATGGTGGCATGCCAACTGCAGTTGGTGACATAAAGAAGGAAACAAATAGCATAGTTAACTCATTAACGACACCACTCATCCACACTAAATCTTCTGAGAGTAGCTCATTGCGCACTCTGGACAAGTCTGTACAAGTCCGTACTACAAGTGATCTACCAGCTGAAATCTCATCGGATAATCATGAAGGTGCTTCCGACAGTGCTCAAGACGCAGAGATTGACGAAAGTAACCAGGGGGAGTCCTGGGTACAGGGGCTAGCGGAGGGTGACTACTGTGATCTCAGTGTTGAGGAGCGCCTCAATGCATTGGTTGCATTGATTGGTGTTGCCACTGAAGGAAATTCTATACGTGCAGTTCTTGAGGAACGGCTGGAGGCAGCAAGTGCTTTGAAAAAGCAAATGTGGGCAGAAGCACAACTTGATAAAAGACGTTCGAGGGAGGAATTTTCTAGTAAAATGCAATATGATTCTGGTATGGGTTTAAAGACCGATGTAGATCAACAAAATACTCTCGCCGAAAGTAATCTTACACCGGTGCATAACCTTGTTAAAGACAGTAATGGAAATGGCAGCTTAGTAAACAACGAGTTGCCTGTCGATCAGCAGAGTCAGCCTAATGCTTGCAGCGTGGTTCATGAAAGGAACGGTGTAAGGCAGGAATTTAGTGCTAATCCAGAAAATTTGTCTGGTCAACAATATGTTACATCTGAGAAAACAAGATCTCAGTTGAAATCATATATAGGCCACAAAGCAGAACAACTTCATGTATACAGATCACTACCCCTCGGGCAAGATCGGAGAAGAAACCGGTACTGGCAGTTTTCAACTTCTGCATCCCCCGATGACCCTGGTTCTGGAAGGATCTTTTTTGAATCTAGAGATGGATACTGGAGGCTGATTGACTCAATTGAGACTTTTGATGCATTAGTATCTTCTCTTGATACTCGTGGCATCCGTGAGTCACATCTTCATTCAATGTTGCAAAGCATTGAACCAACCTTCAAGGAAGCTATTGGGAGGAAAAGGTGTGCCAGCATAGAACCGTCGGCCGGAAGGGTTTTGAAAAATGGAACTAGTGAGATCATAAGTCCGAATCATAGTAACGAGTTTGGAAGTCCATGCAGTACCCTTTCTGGTGTTGCAACCGATAGTGCTATGGCATATTCAGATTCCTTCAGGATAGAACTTGGGCGTAATGATGTTGAAAAGACTGCAATTTCAGAAAGGGCTGATCTGTTTGTAAAGTGGATGTGGAAAGAATGCAACAATCACCAACCAACATGTGCCATGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTTCTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAAATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCCTAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCTGCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGATGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTTTGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGAGACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCCACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTTAAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAGGTGGG ATCAAACAAGGAGCGGGGAGCTGGAGAGTTCATGAAGCTTCCGCCAAGATATACTCCTGCTAAGACCAAACAAGAAACTGAACCTATGGGAACAGGTTTTGATCGACAAGAAACATGGCTAACTCCAAGCAACGGACGAGGCGGTCGGGGTGGCCGTGGACGAGGTAGTCGAGGCGGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCTAAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTGGGGCTTGGAGAGAAGGCCGTCATATGTCAAGGATGATGAGGACAATTCAGCTTCTCAGTCAGAGGAATCGAGTGAGGAAAATAGTGAACCCATGAACGAGGAGTACGATGAGCTGCTCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGAGTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACTACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATGTCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATGAAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTGGCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAGCTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTGGTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCCCGTACAAAGTTACCTC ]
[+] EMBL CB642083 [ nTATGGGATATTCAGATTCCTTCAGGATAGAACTTGGGCGTAATGATGTTGACCCGAATGAAATTTCAGAAAGGGCTGATCTGTTTATAAAGTGGATGTGGAAAGAATGCAACAATCACCAACCAACATGTGCCATGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTTCTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAAATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCCTAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCTGCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGATGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTTTGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGAGACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCCACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTTAAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAAGTGGGAATC AACAAAGAGCGGGGAGCTGG ]
[-] EMBL CB642084 [ ATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCTAAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTGGGGCTTGGAGAGAAGGCCGTCATATGTCAAGGATGATGAGGACAATTCAGCTTCTCAGTCAGAGGAATCGAGTGAGGAAAATAGTGAACCCATGAACGAGGAGTACGATGAGCTGCTCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGAGTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACTACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATGTCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATGAAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTGGCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAGCTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTGGTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCCCGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAGGAGGGGAAGCCCGATAAAATCCCATCCAATAAAAAAAAAGA ]
[+] EMBL AU166351 [ AACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATGTCGAGGACAATGACGATGGCGATGGTGNCGGTGGTGGANCGGAGAACGGTGACGAGGATGAAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTGGCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAGCTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTGGTAATTTACCAACATGTAGCAGGATGTATACNCAGTATATTCAATGTCGGAAATCATTCCCGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAAGAGGGGAAGCCCGATAAAATCCCATCCAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11368#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1966 fasta sequence
[ATACAGAAAAGATCCTGCTGATTCAGAGGCTGTGTTGGCAGCAGCACGTAAAAAAATAAGGGTGTTTCAGAACACTATTTCTGAGTGTGAAGAAGTGGAGAAGGATGTGGATGATGCTGAGAGGGATGAAGATTCTGAGTGTGATGATGCTGACGATGATCCTGATGGTGATGAAGTGAATATTGAGGAAAAAGATGTCAAGACTTCCCTGGTTAAGGCACAAGATGGTGGCATGCCAACTGCAGTTGGTGACATAAAGAAGGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTTCTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAAATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCCTAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCTGCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGATGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTTTGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGAGACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCCACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTTAAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAGGTGGGATCAAACAAGGAGCGGGGAGCTGGAGAGTTCATGAAGCTTCCGCCAAGATATACTCCTGCTAAGACCAAACAAGAAACTGAACCTATGGGAACAGGTTTTGATCGACAAGAAACATGGCTAACTCCAAGCAACGGACGAGGCGGTCGGGGTGGCCGTGGACGAGGTAGTCGAGGCGGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCTAAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTGGGGCTTGGAGAGAAGGCCGTCATATGTCAAGGATGATGAGGACAATTCAGCTTCTCAGTCAGAGGAATCGAGTGAGGAAAATAGTGAACCCATGAACGAGGAGTACGATGAGCTGCTCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGAGTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACTACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATGTCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATGAAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTGGCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAGCTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTGGTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCCCGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAAGAGGG]
[+] EMBL AK059222 [ATACAGAAAAGATCCTGCTGATTCAGAGGCTGTGTTGGCAGCAGCACGTAAAAAAATAAGGGTGTTTCAGAACACTATTTCTGAGTGTGAAGAAGTGGAGAAGGATGTGGATGATGCTGAGAGGGATGAAGATTCTGAGTGTGATGATGCTGACGATGATCCTGATGGTGATGAAGTGAATATTGAGGAAAAAGATGTCAAGACTTCCCTGGTTAAGGCACAAGATGGTGGCATGCCAACTGCAGTTGGTGACATAAAGAAGGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTTCTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAAATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCCTAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCTGCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGATGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTTTGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGAGACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCCACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTTAAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAGGTGGGATCAAACAAGGAGCGGGGAGCTGGAGAGTTCATGAAGCTTCCGCCAAGATATACTCCTGCTAAGACCAAACAAGAAACTGAACCTATGGGAACAGGTTTTGATCGACAAGAAACATGGCTAACTCCAAGCAACGGACGAGGCGGTCGGGGTGGCCGTGGACGAGGTAGTCGAGGCGGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCTAAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTGGGGCTTGGAGAGAAGGCCGTCATATGTCAAGGATGATGAGGACAATTCAGCTTCTCAGTCAGAGGAATCGAGTGAGGAAAATAGTGAACCCATGAACGAGGAGTACGATGAGCTGCTCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGAGTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACTACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATGTCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATGAAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTGGCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAGCTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTGGTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCCCGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAAGAGGG]
consensusID : consensus_11368#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 432 fasta sequence
[GGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAAATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGC-TAAGGAATGCAAAGCATACAACAGCCATGGAATCTTCTCATAGTTCTGGTGCAAAAGAGTGGGGCTTGGAAAAGAAGCCCGTCATATTGTCAAGGATGATGAAGACAATTCAACTTCTCAGTCAAGAAGAATTCAATGAAGAAAATACTGAACCCATGAACCAAAGAGTACCTGCCCCGGCC]
[+] EMBL BI118745 [GGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAAATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGC TAAGGAATGCAAAGCATACAACAGCCATGGAATCTTCTCATAGTTCTGGTGCAAAAGAGTGGGGCTTGGAAAAGAAGCCCGTCATATTGTCAAGGATGATGAAGACAATTCAACTTCTCAGTCAAGAAGAATTCAATGAAGAAAATACTGAACCCATGAACCAAAGAGTACCTGCCCCGGCC]
[+] EMBL BI118750 [GGTAGCAGGGGAGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGATCGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCCGAGAAAGCTCCTCGAAAGTATGCTCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCCATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCTTAAGGAATGCCAAACAT CAACAACCATGGAGTCTTCTTAAAGTTCTGGTGCAAAAAAATGGGGCTTGGAGAAAAAG CCGTCATA TGTCAAGGATGATGAGGACAATTCAACTTCTCAGTC AGAGGAATCGAGTGAGGAAAATAGTGAACCCATGAA CGAGGAGTACCTGCCgggcg ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TCGAATGGAAAGAAAGCGCAAACATAGCGAGGAAGTGAAGATTGCAAAGGAAGTTGAGGC 60
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TCATGAAAAACGAATCAGAAAGGAGCTCGAGAAGCAAGATATGTTGAACAGAAAGAGAGA 120
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AGAACAAGTGCGGAGGGAAATGGAGAGAAATGATCGTGAAAGAAGGAAAGAAGAGGAGAG 180
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GTTGTTGCGTGAAAAGCAGAAGGAAGAAGAGAGATTCCAAAGGGAACAAAGGCGTGAACA 240
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CAAGCGAATGGAAAAATATTTGCTGAAGCAGTCCTTAAGAGCTGAAAAAATAAGACAAAA 300
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GGAGGAGCTTCGTAAGGAGAAAGAAGCCGCAAGGCAGAAGGCTGCCAATGAAAGGGCTAC 360
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AGCACGTAGAATTGCACGGGAGTATATGGAGCTCATGGAAGATGAGCGCCTAGAACTAAT 420
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GGAACTGGTTTCACGAAGCAAAGGGTTGCCCTCTATGCTATCTCTTGATAGCGACACGTT 480
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GCAGCAGCTTGATTCATTCAGAGGAATGCTGAGACAATTTCCTAGTGAAATTGTGAGATT 540
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GAAGGTGCCATTTTCAATAAAACCATGGACAAGCTCTGAAGATAATATTGGAAACCTTTT 600
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GATGGTGTGGAAGTTCTTCATTACCTTTGCGGATGTTCTTGGGATTCCGTCATTCACGCT 660
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGATGAGTTTGTGCAGTCTCTTCATGATTATGATTCAAGGTTGTTGGGAGAATTGCATGT 720
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGCTATGCTGAAATCCATAATAAAAGATATTGAGGATGTTGCCCGGACTCCTTCAGTTGC 780
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TTCAGGGATGACTGCTAATCCTGGAGGTGGTCATCCACAAATTGTTGAAGGGGCATACGA 840
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TTGGGGCTTCAACATACTTGCCTGGCAGCGACACTTGAATTTGCTTACATGGCCTGAAAT 900
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 ATTGCGCCAGTTTGGTTTATCTGCTGGTCTTGGACCACAGTTAAGGAAAAGGAATGCTGA 960
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AAATGTCAATAATCATGATGATAATGAGGGTCGTAATGGTGAGGATGTTATTTCCATACT 1020
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GAGAAGTGGCTCAGCAGCTGTAAATGCTGCTGCTAAAATGAAAGAAAGAGGCTACGGTAA 1080
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TCGCCGCAGGTCTCGACACCGTCTGACACCTGGAACTGTAAAGTTTGCTGCGTTCCATGT 1140
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GTTGTCACTTGAAGGGAGCCAAGGTCTCACGATATTGGAAGTTGCAGAAAAAATACAGAA 1200
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 ATCTGGACTGAGAGACCTTACAACAAGCAAGACACCTGAGGCATCTATATCTGCTGCACT 1260
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GTCAAGGGATTCAAAGCTTTTCGAAAGGACTGCACCTTCAACATACTGTGTTAAAACTCC 1320
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 ATACAGAAAAGATCCTGCTGATTCAGAGGCTGTGTTGGCAGCAGCACGTGAAAAAATAAG 1380
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GGTGTTTCAGAACACTATTTCTGAGTGTGAAGAAGTGGAGAAGGATGTGGATGATGCTGA 1440
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GAGGGATGAAGATTCTGAGTGTGATGATGCTGACGATGATCCTGATGGTGATGAAGTGAA 1500
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TATTGAGGAAAAAGATGTCAAGACTTCCCTGGTTAAGGCACAAGATGGTGGCATGCCAAC 1560
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGCAGTTGGTGACATAAAGAAGGAAACAAATAGCATAGTTAACTCATTAACGACACCACT 1620
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CATCCACACTAAATCTTCTGAGAGTAGCTCATTGCGCACTCTGGACAAGTCTGTACAAGT 1680
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CCGTACTACAAGTGATCTACCAGCTGAAATCTCATCGGATAATCATGAAGGTGCTTCCGA 1740
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CAGTGCTCAAGACGCAGAGATTGACGAAAGTAACCAGGGGGAGTCCTGGGTACAGGGGCT 1800
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AGCGGAGGGTGACTACTGTGATCTCAGTGTTGAGGAGCGCCTCAATGCATTGGTTGCATT 1860
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GATTGGTGTTGCCACTGAAGGAAATTCTATACGTGCAGTTCTTGAGGAACGGCTGGAGGC 1920
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AGCAAGTGCTTTGAAAAAGCAAATGTGGGCAGAAGCACAACTTGATAAAAGACGTTCGAG 1980
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GGAGGAATTTTCTAGTAAAATGCAATATGATTCTGGTATGGGTTTAAAGACCGATGTAGA 2040
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TCAACAAAATACTCTCGCCGAAAGTAATCTTACACCGGTGCATAACCTTGTTAAAGACAG 2100
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TAATGGAAATGGCAGCTTAGTAAACAACGAGTTGCCTGTCGATCAGCAGAGTCAGCCTAA 2160
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGCTTGCAGCGTGGTTCATGAAAGGAACGGTGTAAGGCAGGAATTTAGTGCTAATCCAGA 2220
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AAATTTGTCTGGTCAACAATATGTTACATCTGAGAAAACAAGATCTCAGTTGAAATCATA 2280
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TATAGGCCACAAAGCAGAACAACTTCATGTATACAGATCACTACCCCTCGGGCAAGATCG 2340
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GAGAAGAAACCGGTACTGGCAGTTTTCAACTTCTGCATCCCCCGATGACCCTGGTTCTGG 2400
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AAGGATCTTTTTTGAATCTAGAGATGGATACTGGAGGCTGATTGACTCAATTGAGACTTT 2460
consensus_11368#1 ------------------------------------------------------------
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGATGCATTAGTATCTTCTCTTGATACTCGTGGCATCCGTGAGTCACATCTTCATTCAAT 2520
consensus_11368#1 ------------------------------------ATACAGAAAAGATCCTGCTGATTC 24
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GTTGCAAAGCATTGAACCAACCTTCAAGGAAGCTATTGGGAGGAAAAGGTGTGCCAGCAT 2580
consensus_11368#1 AGAGGC-TGTGTTGGCAGCAGCACGTAAAA--AAATAAGGGTGTT------TCAGAACAC 75
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AGAACCGTCGGCCGGAAGGGTTTTGAAAAATGGAACTAGTGAGATCATAAGTCCGAATCA 2640
consensus_11368#1 TATTTCTGAGTGTGAAGAAGTGGAGAAGGATGTGGATGATGCTGAGAGGGATGAAGATTC 135
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TAGTAACGAGTTTGGAAGTCCATGCAGTACCCTTTCTGGTGTTGCAACCGATAGTGCTAT 2700
consensus_11368#1 TGAGTGTGATGATGC--TGACGAT-GATCCTGATGGTGATGAAGTGAATATTGAGGAAAA 192
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GGCATATTCAGATTCCTTCAGGATAGAACTTGGGCGTAATGATGTTGAAAAGACTGCAAT 2760
consensus_11368#1 AGATGTCAAGACTTCCCTGGTT--AAGGCACAAGATGGTGGCATGCCAACTGCAGTTGGT 250
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TTCAGAAAGGGCTGATCTGTTTGTAAAGTGGATGTGGAAAGAATGCAACAATCACCAACC 2820
consensus_11368#1 GACATAAAGAAGGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTT 310
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AACATGTGCCATGAAACATGGAAAGAAACGATGCTCTGAGCTGATACAATGTTGTGATTT 2880
consensus_11368#1 CTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAA 370
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CTGCTATCAGATTTACTTAGCTGAAGAAACACACTGTGCTTCTTGCCACAAGACATTCAA 2940
consensus_11368#1 ATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCC 430
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 ATCCATTCACAATATCTCAGAACACTCTTCACAGTGTGAAGAGAAACGGAGAACAGATCC 3000
consensus_11368#1 TAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCT 490
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TAATTGGAAGATGCAAATTTCAGACTATTCTGTTCCTGTAGGATTGAGATTGCTAAAGCT 3060
consensus_11368#1 GCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGA 550
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GCTTTTAGCAACCGTTGAGGCTTCAGTTCCAGCTGAAGCTCTCGAACCATTCTGGACAGA 3120
consensus_11368#1 TGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTT 610
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGTTTATCGGAAATCTTGGGGTGTGAAGTTGTATTCCACATCGTCTACAAAAGAAGTCTT 3180
consensus_11368#1 TGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGA 670
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TGAGATGCTAACCATTCTGGAAGGTGCCATAAGACGGGATTTCTTGTCATCTGACTTTGA 3240
consensus_11368#1 GACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCC 730
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GACAACAACTGAGTTACTTAATTTAAGCACGCAAGATTCAGCTTCTCGAAATACTGTTCC 3300
consensus_11368#1 ACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTT 790
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 ACGTTCTGGATCTGCTGATGTACTTCCATGGGTTCCTGACACTGTTGCTGCTGTTGTCTT 3360
consensus_11368#1 AAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAGGTGGGATCAAA 850
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AAGATTGTTAGACCTAGATTCTGCCATCTCATACACTCTTCGTCAGAAGGTGGGATCAAA 3420
consensus_11368#1 CAAGGAGCGGGGAGCTGGAGAGTTCATGAAGCTTCCGCCAAGATATACTCCTGCTAAGAC 910
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CAAGGAGCGGGGAGCTGGAGAGTTCATGAAGCTTCCGCCAAGATATACTCCTGCTAAGAC 3480
consensus_11368#1 CAAACAAGAAACTGAACCTATGGGAACAGGTTTTGATCGACAAGAAACATGGCTAACTCC 970
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CAAACAAGAAACTGAACCTATGGGAACAGGTTTTGATCGACAAGAAACATGGCTAACTCC 3540
consensus_11368#1 AAGCAACGGACGAGGCGGTCGGGGTGGCCGTGGACGAGGTAGTCGAGGCGGTAGCAGGGG 1030
consensus_11368#2 -------------------------------------------------GGTAGCAGGGG 11
consensus_11368#0 AAGCAACGGACGAGGCGGTCGGGGTGGCCGTGGACGAGGTAGTCGAGGCGGTAGCAGGGG 3600
***********
consensus_11368#1 AGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGAT 1090
consensus_11368#2 AGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGAT 71
consensus_11368#0 AGGCAGATCCCGGAGTCGTGGTGGCAAGGTCCCAAGAGGTATTAGCAGCTCCCCCAAGAT 3660
************************************************************
consensus_11368#1 CGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGC 1150
consensus_11368#2 CGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGC 131
consensus_11368#0 CGAGTTCAGGGGTTACAGTGCCAGCGCCGTGTCATCTGAGAAAGCTCCTCGAAAGTATGC 3720
************************************************************
consensus_11368#1 TCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCC 1210
consensus_11368#2 TCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCC 191
consensus_11368#0 TCGTCGAGGGCGTAATCGTGGACGTGGGCGTGGACTTAGAACTGTTAGACCTCGGCAGCC 3780
************************************************************
consensus_11368#1 ATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCT 1270
consensus_11368#2 ATCAAATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCT 251
consensus_11368#0 ATCAGATATTGGAGCCAGATCAATTCCAAAGCCAAACTTGCTGGGCAGCTTTAGCATGCT 3840
**** *******************************************************
consensus_11368#1 AAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTG 1330
consensus_11368#2 AAGGAATGCAAAGCATACAACAGCCATGGAATCTTCTCATAGTTCTGGTGCAAAAGAGTG 311
consensus_11368#0 AAGGAATGCAAAGCATACAACAGCCATGGAGTCTCCTCAGAGTTCTGGTGCAGAAGAGTG 3900
****************************** *** **** ************ *******
consensus_11368#1 GGGCTTGGAGA-GAAGGCCGTCATAT-GTCAAGGATGATGAGGACAATTCAGCTTCTCAG 1388
consensus_11368#2 GGGCTTGGAAAAGAAGCCCGTCATATTGTCAAGGATGATGAAGACAATTCAACTTCTCAG 371
consensus_11368#0 GGGCTTGGAGA-GAAGGCCGTCATAT-GTCAAGGATGATGAGGACAATTCAGCTTCTCAG 3958
********* * **** ********* ************** ********* ********
consensus_11368#1 TCA-GAGGAATCGAGTGAGGAAAATAGTGAACCCATGAAC-GAGGAGTACGATGAGCTGC 1446
consensus_11368#2 TCAAGAAGAATTCAATGAAGAAAATACTGAACCCATGAACCAAAGAGTACC-TGCCCCGG 430
consensus_11368#0 TCA-GAGGAATCGAGTGAGGAAAATAGTGAACCCATGAAC-GAGGAGTACGATGAGCTGC 4016
*** ** **** * *** ******* ************* * ****** ** * *
consensus_11368#1 TCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGA 1506
consensus_11368#2 CC---------------------------------------------------------- 432
consensus_11368#0 TCCCAGATTATTCAAGGGACAATTCTGGGTCCAGCCCTCTTCAGATGATGGATGATGGGA 4076
*
consensus_11368#1 GTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACT 1566
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GTGACGATAATGAAGAAGATGCCGAAGGGGATGAAGATGGTGAGGAAGATGGAGAGGACT 4136
consensus_11368#1 ACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATG 1626
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 ACGATGCAGAACAGCATGTTGACGAAGACAACGACGATGCTGAGATGGGCGAGGATGATG 4196
consensus_11368#1 TCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATG 1686
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 TCGAGGACAATGACGATGGCGATGGTGGCGGTGGTGGAGCGGAGAACGGTGACGAGGATG 4256
consensus_11368#1 AAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTG 1746
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 AAGACGGTACATCATATTCTTCCGAGTATAGCGAATAAAACGAATGAATTAAGAAGTCTG 4316
consensus_11368#1 GCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAG 1806
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GCCTTTTGAAGGTCACGTGGCAACCAAGTGATGGTACGGTTTACATCTGGTTCTATCTAG 4376
consensus_11368#1 CTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTG 1866
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CTCAAACAGATGGTTTATCCATACATAGTAGAGGATTATCGGTTTTGTAGAAGTGTATTG 4436
consensus_11368#1 GTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCC 1926
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 GTAATTTACCAACATGTAGCAGGATGTATACACAGTATATTCAATGTCGGAAATCATTCC 4496
consensus_11368#1 CGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAAGAGGG-------------------- 1966
consensus_11368#2 ------------------------------------------------------------
consensus_11368#0 CGTACAAAGTTACCTCGTACGGCAGGAAAAGTTAGGAGGGGAAGCCCGATAAAATCCCAT 4556
consensus_11368#1 --------------------
consensus_11368#2 --------------------
consensus_11368#0 CCAATAAAAAAAAAGAAAAA 4576
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||