cluster # 11387

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Oryza sativa
cluster # 11387 cluster # 11387 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11387#0 length = 3444 sequences # 8

consensus_11387#1 length = 625 sequences # 1

consensusID : consensus_11387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 3444
fasta sequence

                              [AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTGTGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGTTTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATACACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTTTTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTCCACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTGCTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGAGAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGAGGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCATCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTTCTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCTAACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTACTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATAGTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTATCAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAGTTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCAAACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTTTATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTGAAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCAAGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTATTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCCATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAAAAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAGTTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATCATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTATTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAATTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTTAGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGATGCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACCACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAAGATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG-TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGGGTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTCAGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTTTCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAATTAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTAGTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCGATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTCCCTTTACTTACC]

[+] EMBL AK065594             [AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTGTGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGTTTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATACACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTTTTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTCCACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTGCTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGAGAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGAGGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCATCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTTCTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCTAACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTACTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATAGTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTATCAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAGTTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCAAACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTTTATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTGAAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCAAGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTATTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCCATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAAAAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAGTTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATCATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTATTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAATTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTTAGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGATGCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACCACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAAGATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGGGTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTCAGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTTTCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAATTAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTAGTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCGATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCT                                                                                                         ]
[+] EMBL CF312147             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAAGATTAATTATCTATCC CAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTTGCTTGAGGTTGTTTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK061427             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB679885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCCATCGGTGTCGGCGTGGTGAAAGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB679886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CA760157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAAGGACCCCAGAT TTCCT GGCGGCCGTGGCAAGCTGGGAAAAGGCGACTGGGGGGGCATTTCTGGGCACTTCGTCACTAGCCGGACTTCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTTTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAAaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF312148             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTCCGTCGCCGAGCACGCCTTTTTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGGGTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTCAGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTTTCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAATTAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTAGTACAAaaaa                                                                                                                                                                                                  ]
[+] EMBL CF329787             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACAGGTTGTGATCGATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTCCCTTTACTTACC]




>consensus_11387#0
AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTG
TGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGT
TTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATA
CACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTT
TTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTC
CACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTG
CTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGA
GAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGA
GGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCA
TCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTT
CTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCT
AACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTA
CTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATA
GTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTAT
CAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAG
TTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCA
AACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTT
TATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTG
AAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCA
AGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTA
TTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCC
ATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAA
AAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAG
TTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATC
ATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTA
TTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAA
TTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTT
AGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGAT
GCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACC
ACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAA
GATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTT
GAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCT
CTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATC
ACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTG
GCTTGAGGTTGTTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGT
GCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGG
TTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATG
GGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGA
CTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGC
GGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCC
AGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTG
ATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAAC
TGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTC
CATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACAT
TGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACAT
CCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAG
TTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTT
TTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATC
AGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCAT
ATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGG
GTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTC
AGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTT
TCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAAT
TAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTA
GTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCG
ATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ACCCCTGTCTTCCCTTTACTTACC

consensusID : consensus_11387#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence

                              [CGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGGTTTACTGAATATTTAAGTTGACTCTTAAAAGATCAGTTCAACATAGGAGTTGCTTGGCATTTCAACAAGTGTATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCANGTGCAGCTCCAGATGCCTGACCTGGAG]

[+] EMBL CA754768             [CGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGGTTTACTGAATATTTAAGTTGACTCTTAAAAGATCAGTTCAACATAGGAGTTGCTTGGCATTTCAACAAGTGTATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCANGTGCAGCTCCAGATGCCTGACCTGGAG]




>consensus_11387#1
CGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCT
CTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGGTTTACTGAATA
TTTAAGTTGACTCTTAAAAGATCAGTTCAACATAGGAGTTGCTTGGCATTTCAACAAGTG
TATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGACTGAGGAAGAACACCAGAT
GTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTT
CGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCA
GAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAA
GAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTC
GATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAG
TAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCANGT
GCAGCTCCAGATGCCTGACCTGGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11387#0      AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTG 60
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGT 120
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATA 180
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTT 240
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTC 300
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTG 360
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGA 420
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGA 480
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCA 540
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTT 600
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCT 660
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTA 720
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATA 780
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTAT 840
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAG 900
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCA 960
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTT 1020
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTG 1080
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCA 1140
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTA 1200
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCC 1260
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAA 1320
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAG 1380
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATC 1440
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTA 1500
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAA 1560
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTT 1620
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGAT 1680
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACC 1740
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAA 1800
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTT 1860
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCT 1920
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      CTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATC 1980
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTG 2040
consensus_11387#1      --------------------------------------------------------CGTC 4
                                                                                ** 

consensus_11387#0      GCTTGAGGTTGTTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGT 2100
consensus_11387#1      ATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGG------TCTCC----AATGGGT 54
                          *  * ****** *  **  *       *  ****       *****    **   **

consensus_11387#0      GCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGG 2160
consensus_11387#1      ACCTCTCTGATGGGCTCATGGGA-----AGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGG 109
                        ****      * *  * *** *     **  * *    ***        * **    **

consensus_11387#0      TTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATG 2220
consensus_11387#1      TTTACTGAATATTTAAGTTGAC--TCTTAAAAGATCAGTTCAACATAGGAGTTGC---TT 164
                       ***  *     *     * *    * *  *  **  **  **      * **  *   * 

consensus_11387#0      GGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGA 2280
consensus_11387#1      GGCATTTC---AACAAGTGTATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGA 221
                       ** *  **    *   *   ***   *    * *     * *    **************

consensus_11387#0      CTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGC 2340
consensus_11387#1      CTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGC 281
                       ************************************************************

consensus_11387#0      GGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCC 2400
consensus_11387#1      GGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCC 341
                       ************************************************************

consensus_11387#0      AGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTG 2460
consensus_11387#1      AGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTG 401
                       ************************************************************

consensus_11387#0      ATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAAC 2520
consensus_11387#1      ATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAAC 461
                       ************************************************************

consensus_11387#0      TGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTC 2580
consensus_11387#1      TGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTC 521
                       ************************************************************

consensus_11387#0      CATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACAT 2640
consensus_11387#1      CATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACAT 581
                       ************************************************************

consensus_11387#0      TGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACAT 2700
consensus_11387#1      TGCTGGCAAATCCTCANGTGCAGCTCCAGATGCCTGACCTGGAG---------------- 625
                       **************** ***************************                

consensus_11387#0      CCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAG 2760
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTT 2820
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATC 2880
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCAT 2940
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGG 3000
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTC 3060
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTT 3120
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAAT 3180
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      TAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTA 3240
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      GTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCG 3300
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAA 3360
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3420
consensus_11387#1      ------------------------------------------------------------
                                                                                   

consensus_11387#0      ACCCCTGTCTTCCCTTTACTTACC 3444
consensus_11387#1      ------------------------