cluster # 11390

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Oryza sativa
cluster # 11390 cluster # 11390 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11390#0 length = 2028 sequences # 9
consensusID : consensus_11390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2028
fasta sequence
                              [CTTCCCTTTCCTCTCTTCTCCTCTACTCCTCGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTGCTGTTCTTCGCTCGCGCCCGCCCACCACTGCAACTCCTCGTCTCCCCCTCCGCCGCGTTGCCGGGTGGAGTTGCCTTGCCCGAGAGGAGCGGGCACTTCGGGTTTGTGAGAGTGAGAGCTCTGTGCAGCGGACAGGTTTGAGGCGGCGGCGGCGGGGCTCCCACTCGGCCGAATGGACTGCTAGTAGCGGTTGCTTCTATGTGTACAGTATCTAACCTTCTAACCATTTTCAAAGGAGGTCATATTTTGTAGGGCATCGTATGCCTTATTATCTGGCATTGGCTGGTTTAGATGTCGTTTCGTAGCATAGTTCGCGATGTCCGGGATGGTTTTGGAAGCTTGTCAAGAAGGAGCTTTGAGGTGACCCTTGCAAGTCTTTATGGACTTACTGGGCATCACAAAGGGAAGACTCAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCCGCTGGGCAAGTCTTCCGCCCGAACTCCTCCGTGAGGTCATACGGAGACTGGAGGCTGATGAGAGTACATGGCCATCCCGAAGGAATGTCGTCTGCTTTGCAGCTGTTTGTAGGACATGGAGGGAAATGTGTAAAGAGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGGTCTCTATAAAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATAGATCAAAATCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTGGGAAATTCGTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTTCAATGGTTTCTGGCAACATCTCAAGATCGAGCAGAACTAATATTGGAAAATTGAGGTCAAATTTCCTTGGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAGTCCCTCACGTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTCCTTCTGTTACTTATAACATAGCTCAGGTGAGCTATGAACTAAATGTCCTTGGCACAAGAGGTCCTAGACGGATGCGTTGCATGATGCACTCCATACCTGCCTCCTC-GGTGGAGCCTGGTGGCATAGT-CCCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTCGCAGCACCACCTCCTTCTCTCAATCATTCCGGAGCACCACCTCCTTCTCTAAGTCCATCATGGACCCATCCATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGTGGTTCTATAAT-GGGTGGTGATGACAATGGTGAAATCAAGGAGAGGCCCTTAGTGCTCCGTAACAAG-CCCCCGAGAT-GGCATGAGCAGCTACAGTGCT-GGTGCCTGAACTTCC-GTGGCCGTGTCACCATTGCCTCAGTGAAGAATTTCCAGCTGGTTGCTGCACCAAGCCCTCCTCCTGCTGGTGCTCCAACTCCTTCGCAACCTGGTCCAGCCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTGCAAGGGATATGTTCACAATGGACTACCGCTATCCTCTCT-CTGCCTTCCAGGCTTTCGCTATTTGTTTGAGCAGTTTCGACACGAAATTGGCATGTGAATAATTGTTGGAAGAAGGAAAAACTGAAGAAGGGCAAGAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGATGTTTGCATTTTTTTTTCTTGTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCAGGAAAGCATGTTTTTATGTGCCCTCATGCATGATAGAGGTAAGGAGCCACATATCATCCACTGATCCATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGAAAGGTTCCCTCCATTCTTCTGTTAAAAAGCATATATATTCCGTTGGCTACAAAAA]

[+] EMBL AK102221             [CTTCCCTTTCCTCTCTTCTCCTCTACTCCTCGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTGCTGTTCTTCGCTCGCGCCCGCCCACCACTGCAACTCCTCGTCTCCCCCTCCGCCGCGTTGCCGGGTGGAGTTGCCTTGCCCGAGAGGAGCGGGCACTTCGGGTTTGTGAGAGTGAGAGCTCTGTGCAGCGGACAGGTTTGAGGCGGCGGCGGCGGGGCTCCCACTCGGCCGAATGGACTGCTAGTAGCGGTTGCTTCTATGTGTACAGTATCTAACCTTCTAACCATTTTCAAAGGAGGTCATATTTTGTAGGGCATCGTATGCCTTATTATCTGGCATTGGCTGGTTTAGATGTCGTTTCGTAGCATAGTTCGCGATGTCCGGGATGGTTTTGGAAGCTTGTCAAGAAGGAGCTTTGAGGTGACCCTTGCAAGTCTTTATGGACTTACTGGGCATCACAAAGGGAAGACTCAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCCGCTGGGCAAGTCTTCCGCCCGAACTCCTCCGTGAGGTCATACGGAGACTGGAGGCTGATGAGAGTACATGGCCATCCCGAAGGAATGTCGTCTGCTTTGCAGCTGTTTGTAGGACATGGAGGGAAATGTGTAAAGAGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGGTCTCTATAAAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATAGATCAAAATCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTGGGAAATTCGTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTTCAATGGTTTCTGGCAACATCTCAAGGTCGAGCAGAACTAATATTGGAAAATTGAGGTCAAATTTCCTTGGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAGTCCCTCACGTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTCCTTCTGTTACTTATAACATAGCTCAGGTGAGCTATGAACTAAATGTCCTTGGCACAAGAGGTCCTAGACGGATGCGTTGCATGATGCACTCCATACCTGCCTCCTC GGTGGAGCCTGGTGGCATAGT CCCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTCGCAGCACCACCTCCTTCTCTCAATCATTCCGGAGCACCACCTCCTTCTCTAAGTCCATCATGGACCCATCCATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGTGGTTCTATAAT GGGTGGTGATGACAATGGTGAAATCAAGGAGAGGCCCTTAGTGCTCCGTAACAAG CCCACGAGAT GGCATGAGCAGCTACAGTGCT GGTGCCTGAACTTCC GTGGCCGTGTCACCATTGCCTCAGTGAAGAATTTCCAGCTGGTTGCTGCACCAAGCCCTCCTCCTGCTGGTGCTCCAACTCCTTCGCAACCTGGTCCAGCCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTGCAAGGGATATGTTCACAATGGACTACCGCTATCCTCTCT CTGCCTTCCAGGCTTTCGCTATTTGTTTGAGCAGTTTCGACACGAAATTGGCATGTGAATAATTGTTGGAAGAAGGAAAAACTGAAGAAGGGCAAGAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGATGTTTGCATTTTTTTTTCTTGTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCAGGAAAGCATGCTTTTATGTGCCCTCATGCATGATAGAGGTAAGGAGCCACATATCATCCACTGATCCATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGAAA                                                     ]
[+] EMBL CF280506             [CTTCCCTTTCCTCTCTTCTCCTCTACTCCTCGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTGCTGTTCTTCGCTCGCGCCCGCCCACCACTGCAACTCCTCGTCTCCCCCTCCGCCGCGTTGCCGGGTGGAGTTGCCTTGCCCGAGAGGAGCGGGCACTTCGGGTTTGTGAGAGTGAGAGCTCTGTGCAGCGGACAGGTTTGAGGCGGCGGCGGCGGGGCTCCCACTCGGCCGAATGGACTGCTGGTAGCGGTTGCTTCTATGTGTACAGTATCTAACCTTCTAACCATTTTCAAAGGAGGTCATATTTTGTAGGGCATCGTATGCCTTATTATCTGGCATTGGCTGGTTTAGATGTCGTTTCGTAGCATAGTTCGCGATGTCCGGGATGGTTTTGGAAGCTTGTCAAGAAGGAGCTNTGAGGTGACCCTTGCAAGTCTTTATGGACTTACTGGGCATCACAAAGGGAAGACTCAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCCGCTGGGCAAGTCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB096937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAAGTCTTTATGGACTTACTGGGCATCACAAAGGGAAGACTCAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCCGCTGGGCAAGTCTTCCGCCCGAACTCCTCCGTGAGGTCATACGGAGACTGGAGGCTGATGAGAGTACATGGCCATCCCGAAGGAATGTCGTCTGCTTTGCAGCTGTTTGTAGGACATGGAGGGAAATGTGTAAAGAGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGGTCTCTATAAAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATAGATCAAAATCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTGGGAAATTCGTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTTCAATGGTTTCTGGCAACATCTCAAGATCGAGCAGAACTAATATTGGAAAATTGAGGTCAAATTTCCTTGGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAGTCCCTCACGTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTCCTTCTGTTACTTATAACATAGCTCANGTGAGCTATGAACTAAATGTCCTTGGCACAAGANGTCCTAGACNGATGCGTTGCATGATGCACTNCATACCTGNCTNCTCGGGNGGAGCCTGGNGGCATAGTCCCCGGGCCAGCCTGAGCAAATTGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA763942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGGTCTCTATAAAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATAGATCAAAATCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTGGGAAATTCGTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTTCAATGGTTTCTGGCAACATCTCAAGATCGAGCAGAACTAATATTGGAAAATTGAGGTCAAATTTCCTTGGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAGTCCCTCACGTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTCCTTCTGTTACTTATAACATAGCTCAGGTGAGCTATGAACTAAATGTCCTTGGCACAAGAGGTCCTAGACGGATGCGTTGCATGATGCACTCCATACCTGCCTCCTC GGTGGAGCCTGGTGGCATAGT CCCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTCGCAGCACCACCTNCTTCTCTCAATCATTNCGGAGCACCACCTNCTTCTCTAAGTCCATCATGGACCCATCCATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGNGGNTCTATAATGGGGGGGNGATGACAATGGNGNAATCAAGGAGAGGCCCTTAGGGCTCCGTAACAAGCCCCCCGAGATGGGCATGAGCAGCTACGGGGCT GGNGCCTGAACTTCCGGGGGCCGGGGCANCATGGNCTCAGGGAA AAATTCCAGCTGGNTGCTGGACCAAGCCCTNCTCCTGCTGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSR14031A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGCATGATGCACTCCATACCTGCCTCCTC GGTGGAGCCTGGTGGCATAGT CCCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTNGCAGCACCACCTCCTTCTCTCAATCATTCCGGAGCACCACCTCCTTCTCTAAGTCCATCATGGACCCATCCATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGTGGTTCTATAAT GGGTGGTGATGACAATGGTGAAATCAAGGAGAGGCCCTTAGTGCTCCGTAACAAG CCCCCGAGAT GGCATGAGCAGCTACAGTGCT GGTGCCTGAACTTCC GTGGCCGTGTCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AA749655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATGAGCAGCTAC GTGCTGGGTNCCTGAACTTCC GTGGCCGTGTCACCATTGCCTCAGT AAGAATTTCCAGCTGGTTGCTGCACCAAGCCCTCCTCCTGCTGGTNCTCCAACTCCTTCG AACCTGGT CAGCCG CNCCG AAAGGTa                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU031742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cCCTTCGCAACCTGGTCCAGCCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTNCAAGGGATATGTTCACAATGGACTACCGCTATCCTCTCTCCTGCCTTCCAGGCTTTCGCTATTTGTTTGAGCAGTTTCGACACGAAATTGGCATGTGAATAATTGTTGGAAGAAGGAAAAACTGAAGAAGGGCAAGAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGATGTTTGCATTTTTTTTTCTTGTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCAGGAAAGCATGTTTTTATGTGCCCTCATGCATGATAGAGGTAAGGAGCCACATATCATCCACTGATCCATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGAAAGGTTCCCTCCATTCTTCTGTTATCCAGCATATATATTCCGTTGGCTACAAAAA]
[+] EMBL CA999244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTGCAAGGGATATGTTCACGATGGACTACCGCTATCCTCTCT CTGCCTTCCAGGCTTTCGCTATTTGTTTGAGCAGTTTCGACACGAAATTGGCATGTGAATAATTGTTGGAAGAAGGAAAAACTGAAGAAGGGCAAGAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGATGTTTGCATTTTTTTTTCTTGTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCAGGAAAGCATGTTTTTATGTGCCCTCGTGCATGATAGAGGTAAGGAGCCACATATCATCCACTGATCCATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGAAAGGTTCCCTCCATTCTTCTGTTAAAAAaaaa                       ]
[-] EMBL CF280507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGGTGTTTGCATTTTTTTTTCTTGTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCAGGAAAGCATGTTTTTATGTGCCCTCATGCATGATAGAGGTAAGGAGCCACATATCATCCACTGATCCATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGAAAGGTTCCCTCCATTCTTCTGTTAAAAA                           ]




>consensus_11390#0
CTTCCCTTTCCTCTCTTCTCCTCTACTCCTCGCCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCCTCTTGCTGTTCTTCGCTCGCGCCCGCCCACCACTGCAACTCCTCGTCTCCCCCTC
CGCCGCGTTGCCGGGTGGAGTTGCCTTGCCCGAGAGGAGCGGGCACTTCGGGTTTGTGAG
AGTGAGAGCTCTGTGCAGCGGACAGGTTTGAGGCGGCGGCGGCGGGGCTCCCACTCGGCC
GAATGGACTGCTAGTAGCGGTTGCTTCTATGTGTACAGTATCTAACCTTCTAACCATTTT
CAAAGGAGGTCATATTTTGTAGGGCATCGTATGCCTTATTATCTGGCATTGGCTGGTTTA
GATGTCGTTTCGTAGCATAGTTCGCGATGTCCGGGATGGTTTTGGAAGCTTGTCAAGAAG
GAGCTTTGAGGTGACCCTTGCAAGTCTTTATGGACTTACTGGGCATCACAAAGGGAAGAC
TCAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCCGCTGGGC
AAGTCTTCCGCCCGAACTCCTCCGTGAGGTCATACGGAGACTGGAGGCTGATGAGAGTAC
ATGGCCATCCCGAAGGAATGTCGTCTGCTTTGCAGCTGTTTGTAGGACATGGAGGGAAAT
GTGTAAAGAGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGGTCTCTAT
AAAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATAGATCAAA
ATCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTGGGAAATT
CGTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTTCAATGGT
TTCTGGCAACATCTCAAGATCGAGCAGAACTAATATTGGAAAATTGAGGTCAAATTTCCT
TGGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAGTCCCTCA
CGTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTCCTTCTGT
TACTTATAACATAGCTCAGGTGAGCTATGAACTAAATGTCCTTGGCACAAGAGGTCCTAG
ACGGATGCGTTGCATGATGCACTCCATACCTGCCTCCTCGGTGGAGCCTGGTGGCATAGT
CCCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTCGCAGCACCAC
CTCCTTCTCTCAATCATTCCGGAGCACCACCTCCTTCTCTAAGTCCATCATGGACCCATC
CATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGTGGTTCTATAATGGGTGGTGATGA
CAATGGTGAAATCAAGGAGAGGCCCTTAGTGCTCCGTAACAAGCCCCCGAGATGGCATGA
GCAGCTACAGTGCTGGTGCCTGAACTTCCGTGGCCGTGTCACCATTGCCTCAGTGAAGAA
TTTCCAGCTGGTTGCTGCACCAAGCCCTCCTCCTGCTGGTGCTCCAACTCCTTCGCAACC
TGGTCCAGCCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTGCAAGGGATATGTT
CACAATGGACTACCGCTATCCTCTCTCTGCCTTCCAGGCTTTCGCTATTTGTTTGAGCAG
TTTCGACACGAAATTGGCATGTGAATAATTGTTGGAAGAAGGAAAAACTGAAGAAGGGCA
AGAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGATGTTTGCATTTTTTTTTCTT
GTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCAGGAAAGC
ATGTTTTTATGTGCCCTCATGCATGATAGAGGTAAGGAGCCACATATCATCCACTGATCC
ATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGAAAGGTTC
CCTCCATTCTTCTGTTAAAAAGCATATATATTCCGTTGGCTACAAAAA
clustalw multiple alignements is not computed in this case