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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11404#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2205 fasta sequence
[TCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAAAGCAAAACCCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGCCGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATATTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATAAAAAAAGGA]
[+] EMBL AK103588 [TCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAAAGCAAAACCCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGCCGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATATTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTA ]
[+] EMBL CB631615 [ TCGCCGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGACCCCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGGCATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCCACAGCTTTGGCTACTGCTCT ]
[+] EMBL CB666171 [ AATCCCCTTA GTTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTG ]
[-] EMBL CB666172 [ TTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATATTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATAAAAAAAGGA]
consensusID : consensus_11404#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 885 fasta sequence
[CGAGACAAGGGGGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTGAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGGTATATTTGATAATACTTTTTCCTCCACTTAAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTANTTGGCACGTGCGCGGNANAATAGCATGAGACACCTTTTTTCTTCGATAGGAAAAAACATTGGTTATATGNAGCAAAGGTGGAATTAAGGATTTTCNTTTACTTTTAGCTAAATTTACTGNCTANAAANGGGGAAAATTACATGATAGNAG]
[+] EMBL CA766911 [CGAGACAAGGGGGGTTTTGACAGAATATGTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTGAAGGGGCTTGGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGGTATATTTGATAATACTTTTTCCTCCACTTAAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTANTTGGCACGTGCGCGGNANAATAGCATGAGACACCTTTTTTCTTCGATAGGAAAAAACATTGGTTATATGNAGCAAAGGTGGAATTAAGGATTTTCNTTTACTTTTAGCTAAATTTACTGNCTANAAANGGGGAAAATTACATGATAGNAG]
[+] EMBL BI812560 [ ATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCTTTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAAC ATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCC AAGAAAGATTTTCATGTCAAC AAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATAC TTTTCCTCCCCTT AGGAATTTGCTAATGCTTTCTTTAAaaaaaaaa ]
consensusID : consensus_11404#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 779 fasta sequence
[TGGCACGTCAGCTCTTTGTGTGAGAGGGTATAAAGCAATAATTAGCAAGCATTTAGCATCTCTGTTTGCTATGTAACTAGAAGCAAAATTTTATTTTCTAATGCATCCGTGTCGAGTGAACAATATTTCCTCATTCTTCTCCCATGATATGCGAAGGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACA-AAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGT-GCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATGTTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAGTAGAATTCTTTTCCCT]
[-] EMBL CB631616 [TGGCACGTCAGCTCTTTGTGTGAGAGGGTATAAAGCAATAATTAGCAAGCATTTAGCATCTCTGTTTGCTATGTAACTAGAAGCAAAATTTTATTTTCTAATGCATCCGTGTCGAGTGAACAATATTTCCTCATTCTTCTCCCATGATATGCGAAGGTATCATAGGTTCAAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCATCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCTCACAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACATGAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAATCTAGTCGCCAAAGAAAGATTTTCATGTCAACA AAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGT GCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATGTTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATATTACATGATAGTAGAATTCTTTTCCCT]
[+] EMBL BQ908365 [ CGCCAAAGAAAGATTTTCATGTCAACANAAAAGGGTGCAGATATCTGTCAAGAACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGGCGCGGAAGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATGTTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCAAAAAAA ]
consensusID : consensus_11404#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence
[ACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGGTTTAATACTTTGTTCTTTAATAGTTTGTCTTACTACTGTTATGATTCAAAGTTGATGATTGGGCATGTCACTATGTCCTCTTAATTATATACAGCTATTTTATATTTTAATTTCCATTGATGTACTGACTGTACTTTCTTTTTTGTTATTCTCTTATGTGTCTATGG]
[+] EMBL CF306737 [ACATGTGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGGTTTAATACTTTGTTCTTTAATAGTTTGTCTTACTACTGTTATGATTCAAAGTTGATGATTGGGCATGTCACTATGTCCTCTTAATTATATACAGCTATTTTATATTTTAATTTCCATTGATGTACTGACTGTACTTTCTTTTTTGTTATTCTCTTATGTGTCTATGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 TCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAAAGCAAAAC 60
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 CCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGCCGATGAGA 120
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 TCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCCGTAGCGCC 180
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 ACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGA 240
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGA 300
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTG 360
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGC 420
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGG 480
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 CGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGA 540
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 CCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACAC 600
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTT 660
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 CCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGT 720
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGA 780
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 TTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAA 840
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 CATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAAT 900
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 TTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGG 960
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 AATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAA 1020
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 TCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCAT 1080
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAG 1140
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 TTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATG 1200
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------------------------------------------
consensus_11404#2 ------------------------------------------------------------
consensus_11404#0 GCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTT 1260
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 ------------------------CGAGACAAGGGGGGTTTTGACAGAATATGTTCTGGT 36
consensus_11404#2 --------------------------------------------------------TGGC 4
consensus_11404#0 ATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGT 1320
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 TTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTAT 96
consensus_11404#2 ACGT-CAGCTCTTTGTGTGAGAGGGTATAAAGCAATAATT----AGCAAGCATTTAGCAT 59
consensus_11404#0 TTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTAT 1380
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 TT-TGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTGAAGGGGCTTGGGCTGG 155
consensus_11404#2 CTCTGTTTGCTATG--TAACTAGAAGCAAAATTTTATTT--TCTAATGCATCCGTGTCGA 115
consensus_11404#0 TT-TGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGG 1439
consensus_11404#3 ---------------------------ACATGTGGAAGTTCCCAGCGCCATTCCTGATGA 33
* * * * * * *
consensus_11404#1 GAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAA--GTATCATAGGTTCAAGAA 213
consensus_11404#2 GTG-AACAATATTTCCTCATTCTTCTCCCATGATATGCGAAGGTATCATAGGTTCAAGAA 174
consensus_11404#0 GAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAA--GTATCATAGGTTCAAGAA 1497
consensus_11404#3 ACACGGTG-CATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGGTTCCAGCAC 92
**** * * ** * * ** *
consensus_11404#1 AGGCCATCGTAATAAG-AATTGTGACAAGAACCCCCAAA-----CTTCTAGCGGTGCTTC 267
consensus_11404#2 AGGCCATCGTAATAAG-AATTGTGACAAGAACCCCCAAA-----CTTCTAGCGGTGCTTC 228
consensus_11404#0 AGGCCATCGTAATAAG-AATTGTGACAAGAACCCCCAAA-----CTTCTAGCGGTGCTTC 1551
consensus_11404#3 CGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTGCGAGTTGTC 152
** * * ** * *** ** * * *** *** **
consensus_11404#1 AAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCA 327
consensus_11404#2 AAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCA 288
consensus_11404#0 AAAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCA 1611
consensus_11404#3 CCAACA-GCTTTGGCTACTGCTCTTGACATA-AATTTGAGCAACATTTCACTTGTTTTCA 210
** * * * * * ** * ** ** ** ** *** ** * ***
consensus_11404#1 TCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCC 387
consensus_11404#2 TCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCC 348
consensus_11404#0 TCAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCC 1671
consensus_11404#3 TCAC----TGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATT-TTCATTCTTCT 265
*** ** * ***** * * * * * **** * * * ** ** * **
consensus_11404#1 TCACAGGTGACTACCATCTATACATCTTGCCTTGGTGTCAGGTGCCATCGTTTTTTATCT 447
consensus_11404#2 TCACAGG----------------------------------------------------- 355
consensus_11404#0 TCACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCT 1731
consensus_11404#3 GT---------------------------------------------------------- 267
consensus_11404#1 TTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACA 507
consensus_11404#2 -----------------------GAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACA 392
consensus_11404#0 TTTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACA 1791
consensus_11404#3 ---------------------------TTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCT 300
*** ** ** ** * * ** * *
consensus_11404#1 TGAACATGACGCAAACAATATT-ATTGATTAAGAAGACACATTTACACAAGCAGCAGACA 566
consensus_11404#2 TGAACATGACGCAAACAATATT-ATTGATTAAGAAGACACATTTACACAAGCAGCAGACA 451
consensus_11404#0 TGAACATGACGCAAACAATATT-ATTGATTAAGAAGACACATTTACACAAGCAGCAGACA 1850
consensus_11404#3 TTAACCTTCTTGGAATCATACTGATTGTTTCCTTTGG---AGTTCTACTAACAGTTGCTA 357
* *** * ** *** * **** ** * * ** ** * *** * *
consensus_11404#1 ATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATAT-CTGTCAAGA 625
consensus_11404#2 ATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAGGGTGCAGATAT-CTGTCAAGA 510
consensus_11404#0 ATCTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATAT-CTGTCAAGA 1909
consensus_11404#3 A----------AGAGACAGAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCT 407
* * *** *** ** ** * * * *** ** *
consensus_11404#1 ACTGTGCATAAATAGTATTGGTATATTTGATAATACTTTTTCCTCCACTTAAGGAATTTG 685
consensus_11404#2 ACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTT-CCTCCACTTA-GGAATTTG 568
consensus_11404#0 ACTGTGCATAAATAGTATTGTTATATTTGATAATACTTTT-CCTCCACTTA-GGAATTTG 1967
consensus_11404#3 GTTATGTCTGGTTTCCGCTGGTGCAT--GACACAGATTCT-CCTCCA-------GGTTTA 457
* ** * * ** * ** ** * ** * ****** ***
consensus_11404#1 CTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTANTTGGCACGTG 745
consensus_11404#2 CTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATT-GGCACGTG 627
consensus_11404#0 CTAATGCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATT-GGCACGTG 2026
consensus_11404#3 ATACTTTGTTCTTTAATAGTTTGTCTT---ACTACTGTTATGATTCAAAGTTGATGATTG 514
** * ********* * * * * * *** ** * * * **
consensus_11404#1 CGCGGNANAATAGCATGAGACACCTTTTTTCTTCGATAGGAAAAAACATTGGTTATATGN 805
consensus_11404#2 CGCGGAAGAATAGCATGAGACACCTTTTT-CTTCGATAGGAAAATACATTGTTTATATGT 686
consensus_11404#0 CGCGGAAGAATAGCATGAGACACCTTTTT-CTTCGATAGGAAAATACATTGTTTATATGT 2085
consensus_11404#3 ---GGCATGTCACTATG-----TCCTCTTAATTATATACAGCTATTTTATATTTTAATTT 566
** * * *** * * ** ** *** * * ** **
consensus_11404#1 AGCAAAGGTGGAATTAAGGATTTTCNTTTACTTTTAGCTAAATTTACTGNCTANAAANGG 865
consensus_11404#2 AGCAATGTTGTAATTTATGATTTTCTTT-ACTTTTAGCTAAATTTACTGCATAGAAATGT 745
consensus_11404#0 AGCAATATTGTAATTTATGATTTTCTTT-ACTTTTAGCTAAATTTACTGCATAGAAATGT 2144
consensus_11404#3 C-CATTGATGTACT----GACTGTACTTTCTTTTTTGTTAT-TCTCTTATGTGTCTATGG 620
** ** * * ** * * ** **** * ** * * * * * *
consensus_11404#1 GGAAA-ATTACATGATAGNAG--------------------------------------- 885
consensus_11404#2 GTAAATATTACATGATAGTAGAATTCTTTTCCCT-------------------------- 779
consensus_11404#0 GTAAATATTACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATAAAAAAAGG 2204
consensus_11404#3 ------------------------------------------------------------
consensus_11404#1 -
consensus_11404#2 -
consensus_11404#0 A 2205
consensus_11404#3 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||