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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11411#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2916 fasta sequence
[TTCTCATAGTTATCCCCGCCTTTCTCTCCTCCATTGGAGGATTAGAACGGAGAGAGAGGAAGGTGGGGAAAATTGTTAGATTTGTTCATCCATTATATTTTCTTGAAAGGAAAAGGAAGGCGAAGGAATTCAGGTATTTGCATCACATCACAATCTGCAAAGCAGGAATACCTGAAACTCTCATCCAGAGTTGACGAAATCATGTCAACTTAGAATGATATCAAGGCTCTTGTTACATTCAGAAGATCAGGGCTTCAGGCCCTGCTTGTTTGTTGCTGGATGAAGACATTCACCAGGAAACCACTGCAAAGTGCAGTGCACGTACAATTCCTTCGATCAAGTGGAAGGGCATTTCATGGGCTTATAGATCAACTTTGTTCCAAATGTCCTAAACATGATGATGGTGCCACTTTGCAAAGTGAAACCACTTCAAGCAAGTTCATGTGTTTATACAAGTTCTTCAGGACATCAAGTGAAGGTGACACTGCAGCTGTAGACAATGTATTGCGCAATGATGGAAATACAGAAGTTGTCGCTATCCAGTCGAAAGAAAATGGTCGCAATTCTAATAACATATTGGAGGATGGAGAGAAGTCAGTTCTGTCGTCGGATCATTCTAAAAAATTGAGTGCACATCATCGACTGAAAATCTGGATTACTAGTGGACACAGTGGCATAATCGGAAGATACGGAAAGAAGTTGGAGCTAAATGCTGCCAATGTGCCTAAGCAGTTCCCAAGTGAACATGTGAATACTGTATGGCCAGATTGGCTCATGAAGGTGGCCCCTGAGGCAGTGCAAGGCTGGTTCCCTCGTCGTGCAGAATCATTTGAGAAATTAGGCAAGATTGGAGAAGGAACTTATAGTAGTGTGTACAAAGCTCGAGATCTTAAAACAGGCAAGATTGTTGCTCTCAAGAAGGTGCGGTTTGTCAATTTGGATCCTGAAAGTGTGCGCTTTATGGCAAGAGAAATACTTGTTCTTCGGAAACTGAATCATCCGAATGTCATAAAGTTGGAAGGGATCATAGCATCTCCTGTTTCAACAAGTTTGTATCTTGTATTTGAATACATGGAACATGACCTTACTGGTCTTGCTGCAACTCCAGGCCTCAAGTTCACTGAACCACAGGTAAAGTGCTTGATGCAACAATTGCTTAGTGGCCTTGATCACTGCCACAGCAATGGAGTTCTTCATCGAGACTTGAAGGGTTCCAACCTCTTGATTGACAGCAATGGTGTCTTGAAGATTGCAGACTTTGGTCTAGCAACATTTTATGATCCTAACAATCAGCAACCACTCACAAGCCGTGTTGCAACATTGTGGTACAGGCCACCGGAACTTCTGCTTGGTGCCACTAAGTATGGAGTTTCTGTGGATATGTGGAGTACTGGGTGCATTCTGGCAGAATTGCTTGCTAGCAAGCCAATCATGCCAGGAAGAACTGAGGTAGAGCAAATTCACAAGATCTTCAAGCTCTGTGGATCACCCTCTGATGAGTACTGGCAGAAACTGAACGTGCCCCAGACAGGGATGTTCAAGCCCTCTCGCCAGTATAGGCGGTGTATTGCAGATAATTTCAAACATTTCCCTCAGCCAGCTATAGTTCTTCTAGATAATTTGCTTGCATTAGAACCAGAAGCTCGTGGAACAGCTGCCTCGACTCTCCAGAGTGACTTTTTCAGAAGAAAGCCACTTGCTTGCAGCCCTTCAAGCTTACCAAAGTTTCCACCGAGCAAAGAATACGATGCAAGACTCAAGCTAGAGGAAGCTAGGAGGCAAAGAAAGGTTGGAGGATCTGTTAGACCTGGAAGAGAGAACGTTAGAATAAATCGTGGTAATGGCTCTATCCAACCAAAGAAACATACATATATCAGTGGAAATCTCCACCCGCAAGGTGATCCACGGACATTAGCTACAAGGGTGCGATCTCCTGGACTTAACGCCACATGGAACAACAGGGGTGATTCAATGACGGTCGTGAAGTACCTGGATGTAAGTACAACTCTGTGCGGATAGCATATTCCACTATCTTGACGACAAGGAGCTCAGACTTGCTTCAACCTGAACCAACTGATGTAATGAATAAGATGCATGGTTCTCCCAAGAACGACCTGGGAGAGAAGGGCCAGACTGGGAGCTGTAGGGTTAAGAACAGAACGCATCACTCTGGTTCACTGGTTACACCAGAAGGAAACATAGAGGAGATGCTCAAGGAGCATGACAGGAACATCCAAGCAGCCATGCGCAAAGCACGCCTTAACAAGAAGAAATAGTTGTGACATTTAGGTGTGTTCAAGCTAAAGATCCCAACTTTTCCAAGTTCCAGTTGAGGAATGGCAGGGCTGCATTCTTGCACAGAGCACAGAGCTTCTTCAAAAGGATCAAGATCAAACCTGAAATGTCGATACAATACGAGAGTTTGGGCATGGACATTATTTCAAATGACAGGTTGTCCTTTGAACCTGAAATTCTTGACTGATGGCAGTGAGAGATCCAGATCATGCCGGAGCAACTAAGAAGAAATTTCGACAACATTGAGTCATGGATAGGTACATCTTACAGTTACAAAGTATGAGCAGCACTGCGGAAGAGGAGGCCAAACAGAGTGCCAGGGATATCCGAAAGCGTAGACTGGCCTTTATTCTTGCCTGAATTCTTGTTTCACCAAGCTTCTGTGGTCTTTCCCCTTGTTATGGCTGTTCTAACCCATGCCATCTGCATCTGGTGTTGCTAGACGGGCTTGTATAAACTTTTCATCCTCTTATTTCTCTTGTTTTTCTTCTTGCAAGGGTCTTATATAAACTGTGCATTCTTTGTCCAGTTTTTTGGCTGTGTGCATTCTATGCAGAGGCCGGGGGTGGACTCAGTTGGAATGTATCATCTTGGTGTATTTAACTGAGTCTTAATAAAACT]
[+] EMBL AK068916 [TTCTCATAGTTATCCCCGCCTTTCTCTCCTCCATTGGAGGATTAGAACGGAGAGAGAGGAAGGTGGGGAAAATTGTTAGATTTGTTCATCCATTATATTTTCTTGAAAGGAAAAGGAAGGCGAAGGAATTCAGGTATTTGCATCACATCACAATCTGCAAAGCAGGAATACCTGAAACTCTCATCCAGAGTTGACGAAATCATGTCAACTTAGAATGATATCAAGGCTCTTGTTACATTCAGAAGATCAGGGCTTCAGGCCCTGCTTGTTTGTTGCTGGATGAAGACATTCACCAGGAAACCACTGCAAAGTGCAGTGCACGTACAATTCCTTCGATCAAGTGGAAGGGCATTTCATGGGCTTATAGATCAACTTTGTTCCAAATGTCCTAAACATGATGATGGTGCCACTTTGCAAAGTGAAACCACTTCAAGCAAGTTCATGTGTTTATACAAGTTCTTCAGGACATCAAGTGAAGGTGACACTGCAGCTGTAGACAATGTATTGCGCAATGATGGAAATACAGAAGTTGTCGCTATCCAGTCGAAAGAAAATGGTCGCAATTCTAATAACATATTGGAGGATGGAGAGAAGTCAGTTCTGTCGTCGGATCATTCTAAAAAATTGAGTGCACATCATCGACTGAAAATCTGGATTACTAGTGGACACAGTGGCATAATCGGAAGATACGGAAAGAAGTTGGAGCTAAATGCTGCCAATGTGCCTAAGCAGTTCCCAAGTGAACATGTGAATACTGTATGGCCAGATTGGCTCATGAAGGTGGCCCCTGAGGCAGTGCAAGGCTGGTTCCCTCGTCGTGCAGAATCATTTGAGAAATTAGGCAAGATTGGAGAAGGAACTTATAGTAGTGTGTACAAAGCTCGAGATCTTAAAACAGGCAAGATTGTTGCTCTCAAGAAGGTGCGGTTTGTCAATTTGGATCCTGAAAGTGTGCGCTTTATGGCAAGAGAAATACTTGTTCTTCGGAAACTGAATCATCCGAATGTCATAAAGTTGGAAGGGATCATAGCATCTCCTGTTTCAACAAGTTTGTATCTTGTATTTGAATACATGGAACATGACCTTACTGGTCTTGCTGCAACTCCAGGCCTCAAGTTCACTGAACCACAGGTAAAGTGCTTGATGCAACAATTGCTTAGTGGCCTTGATCACTGCCACAGCAATGGAGTTCTTCATCGAGACTTGAAGGGTTCCAACCTCTTGATTGACAGCAATGGTGTCTTGAAGATTGCAGACTTTGGTCTAGCAACATTTTATGATCCTAACAATCAGCAACCACTCACAAGCCGTGTTGCAACATTGTGGTACAGGCCACCGGAACTTCTGCTTGGTGCCACTAAGTATGGAGTTTCTGTGGATATGTGGAGTACTGGGTGCATTCTGGCAGAATTGCTTGCTAGCAAGCCAATCATGCCAGGAAGAACTGAGGTAGAGCAAATTCACAAGATCTTCAAGCTCTGTGGATCACCCTCTGATGAGTACTGGCAGAAACTGAACGTGCCCCAGACAGGGATGTTCAAGCCCTCTCGCCAGTATAGGCGGTGTATTGCAGATAATTTCAAACATTTCCCTCAGCCAGCTATAGTTCTTCTAGATAATTTGCTTGCATTAGAACCAGAAGCTCGTGGAACAGCTGCCTCGACTCTCCAGAGTGACTTTTTCAGAAGAAAGCCACTTGCTTGCAGCCCTTCAAGCTTACCAAAGTTTCCACCGAGCAAAGAATACGATGCAAGACTCAAGCTAGAGGAAGCTAGGAGGCAAAGAAAGGTTGGAGGATCTGTTAGACCTGGAAGAGAGAACGTTAGAATAAATCGTGGTAATGGCTCTATCCAACCAAAGAAACATACATATATCAGTGGAAATCTCCACCCGCAAGGTGATCCACGGACATTAGCTACAAGGGTGCGATCTCCTGGACTTAACGCCACATGGAACAACAGGGGTGATTCAATGACGGTCGTGAAGTACCTGGATGTAAGTACAACTCTGTGCGGATAGCATATTCCACTATCTTGACGACAAGGAGCTCAGACTTGCTTCAACCTGAACCAACTGATGTAATGAATAAGATGCATGGTTCTCCCAAGAACGACCTGGGAGAGAAGGGCCAGACTGGGAGCTGTAGGGTTAAGAACAGAACGCATCACTCTGGTTCACTGGTTACACCAGAAGGAAACATAGAGGAGATGCTCAAGGAGCATGACAGGAACATCCAAGCAGCCATGCGCAAAGCACGCCTTAACAAGAAGAAATAGTTGTGACATTTAGGTGTGTTCAAGCTAAAGATCCCAACTTTTCCAAGTTCCAGTTGAGGAATGGCAGGGCTGCATTCTTGCACAGAGCACAGAGCTTCTTCAAAAGGATCAAGATCAAACCTGAAATGTCGATACAATACGAGAGTTTGGGCATGGACATTATTTCAAATGACAGGTTGTCCTTTGAACCTGAAATTCTTGACTGATGGCAGTGAGAGATCCAGATCATGCCGGAGCAACTAAGAAGAAATTTCGACAACATTGAGTCATGGATAGGTACATCTTACAGTTACAAAGTATGAGCAGCACTGCGGAAGAGGAGGCCAAACAGAGTGCCAGGGATATCCGAAAGCGTAGACTGGCCTTTATTCTTGCCTGAATTCTTGTTTCACCAAGCTTCTGTGGTCTTTCCCCTTGTTATGGCTGTTCTAACCCATGCCATCTGCATCTGGTGTTGCTAGACGGGCTTGTATAAACTTTTCATCCTCTTATTTCTCTTGTTTTTCTTCTTGCAAGGGTCTTATATAAACTGTGCATTCTTTGTCCAGTTTTTTGGCTGTGTGCATTCTATGCAGAGGCCGGGGGTGGACTCAGTTGGAATGTATCATCTTGGTGTATTTAACTGAGTCTTAATAAAACT]
consensusID : consensus_11411#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 848 fasta sequence
[CAGCTTCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA-CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCG-----AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG-ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGGATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCCAACATGGAATTCCTCTGCCTTTCTTTCTGTAACACTTCCAGCAAATGCAAAGCTGAATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCTGCCATTTTTCTTCAGGTAGTATGAGGTCGTCTGCAAAAAAAACTCTTTGCCCTGTTGGCTATGGCGTTTATTTATAGATCCTTTTGAGCCATCTGTCAGGTTGCTTGCGGTCCTTATAAAAAATTTATTGATTTGTGAATAAAAAA]
[+] EMBL CF314219 [CAGCTTCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCG AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATGAATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGGATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGC ]
[+] EMBL CF334967 [ AGCTTCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCGGTTCCAAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATC ]
[+] EMBL CA755007 [ GCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCACATGGGGTGAGAAGAAGCTATCCCAGGCGGCGCAGACCTTGTATCG AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCNGTGAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGAATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAACTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGGC CCGTCGTCCCC GGTCA ]
[-] EMBL CF334968 [ GCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGACCCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCGGTTCCAAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGAATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCCAACATGGAATTCCTCTGCCTTTCTTTCTGTAACACTTCCAGCAAATGCAAAGCTGAATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCTGCCATTTTTCTTCAGGTAGTATGAGGTCGTCTGCAAAAAAAA ]
[-] EMBL CF314220 [ TAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCG AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGGATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCCAACATGGAATTCCTCTGCCTTTCTTTCTGTAACACTTCCAGCAAATGCAAAGCTGAATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCTGCCATTTTTCTTCAGGTAGTATGAGGTCGTCTGCAGAAGAATCTCTTTGCCCTGTTGGCTATGGCGTTTATTTATAGATCCTTTTGAGCCATCTGTCAGGTTGCTTGCGGTCCTTATAAAAAATTTATTGATTTGTGAATAAAAAA]
consensusID : consensus_11411#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 649 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAGGAAGCTTTATTAAGACTCGGTTAAATACACCAAGATGATACATTCCAACTGAGTCTACCCCCGGCCTTTGCATAGAATGCACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAACACAGAAACTAGTGACTAT--CAATCTGTAGACTAGATCGCCACCCATGCTCCTGGGTGAAAAACTCCTGTGCCACCTGGTCCAAACGTTGCGATACCACAGCAATAGTATCCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCACCAATTGCTAAAAGAGAGAGATAGTACGGAACCGATACAACGTCTGCGCCGCCTTGGATAGCTTCTTCTCACCCCATCTGAGCACTCAAACCCTTTCCTTAATGACTCTACGGGGGGGTCGATCTGCTGAGCCCGGACTCCGGCGACGACCGGCGCAGCGTTCGGCGGGGGGCTTCCCTACAGAGGAGGCTAGGGTGGATAAGTGGATGGCCTCTTATCTCCCGAACCCTTGGCGACTGACGTGCCGCGCCGCGTTTTCGCCATTAGTGGAGCCCTACAGAGACCGGCAAAAGAGAGAGCCCCCGGGAAGAGCGCGACGCGGCGACGTTCGTCGAGCGGATAAT]
[-] EMBL AU082376 [TTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAGGAAGCTTTATTAAGACTCGGTTAAATACACCAAGATGATACATTCCAACTGAGTCTACCCCCGGCCTTTGCATAGAATGCACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAACACAGAAACTAGTGACTATCGCAACGTTTGGACCAGGTGGCa ]
[+] EMBL CF337455 [ TTTTTTTTAAATAATGGAAGCTTTATTAAGACTCGGTTAAATACACCAAGATGATACATTCCAACTGAGTCTACCCCCGGCCTTTGCATAGAATGCACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAACACAGAAACTAGTGACTAT CAATCTGTAGACTAGATCGCCACCCATGCTCCTGGGTGAAAAACTCCTGTGCCACCTGGTCCAAACGTTGCGATACCACAGCAATAGTATCCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCACCAATTGCTAAAAGAGAGAGATAGTACGGAACCGATACAACGTCTGCGCCGCCTTGGATAGCTTCTTCTCACCCCATCTGAGCACTCAAACCCTTTCCTTAATGACTCTACGGGGGGGTCGATCTGCTGAGCCCGGACTCCGGCGACGACCGGCGCAGCGTTCGGCGGGGGG ]
[-] EMBL CF317992 [ AATCTGTAGACTAGATCGCCACCCATGCTCCTGGGTGAAAAACTCCTGTGCCACCTGGTCCAAACGTTGCGATACCACAGCAATAGTATCCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCACCAATTGCTAAAAGAGAGAGATAGTACGGAACCGATACAACGTCTGCGCCGCCTTGGATAGCTTCTTCTCACCCCATCTGAGCACTCAAACCCTTTCCTTAATGACTCTAC GGGGGGTCGATCTGCTGAGCCCGGACTCCGGCGACGACCGGCGCAGCGTTCGGCGGGGGTCTTCCCTACAGAGGAGGCTAGGGTGGATAAGTGGATGGCCTCTTATCTCCCGAACCCTTGGCGACTGACGTGCCGCGCCGCGTTTTCGCCATTAGTGGAGCCCTACAGAGACCGGCAAAAGAGAGAGCCCCCGGGAAGAGCGCGACGCGGCGACGTTCGTCGAGCGGATAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TTCTCATAGTTATCCCCGCCTTTCTCTCCTCCATTGGAGGATTAGAACGGAGAGAGAGGA 60
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 AGGTGGGGAAAATTGTTAGATTTGTTCATCCATTATATTTTCTTGAAAGGAAAAGGAAGG 120
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CGAAGGAATTCAGGTATTTGCATCACATCACAATCTGCAAAGCAGGAATACCTGAAACTC 180
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TCATCCAGAGTTGACGAAATCATGTCAACTTAGAATGATATCAAGGCTCTTGTTACATTC 240
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 AGAAGATCAGGGCTTCAGGCCCTGCTTGTTTGTTGCTGGATGAAGACATTCACCAGGAAA 300
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CCACTGCAAAGTGCAGTGCACGTACAATTCCTTCGATCAAGTGGAAGGGCATTTCATGGG 360
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CTTATAGATCAACTTTGTTCCAAATGTCCTAAACATGATGATGGTGCCACTTTGCAAAGT 420
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GAAACCACTTCAAGCAAGTTCATGTGTTTATACAAGTTCTTCAGGACATCAAGTGAAGGT 480
consensus_11411#1 -------------------------------------------------------CAGCT 5
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GACACTGCAGCTGTAGACAATGTATTGCGCAATGATGGAAATACAGAAGTTGTCGCTATC 540
consensus_11411#1 TCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATC 65
consensus_11411#2 ----------------TTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAGGAAGCTTTATT 44
consensus_11411#0 CAGTCGAAAGAAAATGGTCGCAATTCTAATAACATATTGGAGGATGGAGAGAAGTCAGTT 600
** *
consensus_11411#1 CG--C-TCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTC 122
consensus_11411#2 AAGAC-TCGGTTAAATACACCAAGATGATACATTCC----AACTGAGTCTACCCCCGGCC 99
consensus_11411#0 CTGTCGTCGGATCATTCTAAAAAATTGAGTGCACATCATCGACTGAAAATCTGGATTACT 660
* *** * * ** *
consensus_11411#1 TCTGTA-GGGCTC-CACTAATGGCGAAAACGCGGCGCGGCACG--TCAGTCGCCAAGGGT 178
consensus_11411#2 TTTGCATAGAATG-CACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAA 158
consensus_11411#0 AGTGGACACAGTGGCATAATCGGAAGATACGGAAAGAAGTTGGAGCTAAATGCTGCCAAT 720
** * * ** * ** *
consensus_11411#1 TCGGGAGATAAGAGGCCA--TCCACTTAT--CCACCCTA--GCCTCCT------CTGTAG 226
consensus_11411#2 CACAGAAACTAGTGACTA--TCAATCTGT--AGACTAGATCGCCACCCATGCTCCTGGGT 214
consensus_11411#0 GTGCCTAAGCAGTTCCCAAGTGAACATGTGAATACTGTATGGCCAGATTGGCTCATGAAG 780
* ** * * * * * * ** * *** **
consensus_11411#1 GGAAGACCC----CCGCCGAACGCTGCGCCGGTCGT--CGCCGGAGTCCGGGCTCAGCAG 280
consensus_11411#2 GAAAAACTC----CTGTGCCAC-CTGGTCCAAACGT--TGCGATACCACAGCAATAGTAT 267
consensus_11411#0 GTGGCCCCTGAGGCAGTGCAAGGCTGGTTCCCTCGTCGTGCAGAATCATTTGAGAAATTA 840
* * * * * *** * *** ** * *
consensus_11411#1 ATCGACCCCCCGTAGAGTCATTAAGGAAAGGGTT--------TGAGTGCTCAGATGGGGT 332
consensus_11411#2 CCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCA---CCAATTGCTAAAAGAGAGA 324
consensus_11411#0 GGCAAGATTGGAGAAGGAACTTATAGTAGTGTGTACAAAGCTCGAGATCTTAAAACAGGC 900
* * * *** * * * ** * * *
consensus_11411#1 GAGAAGAAGCTATCCAAGGCGGCGCA-GACGTTGTATCGAAA--TACATTAT-TAAGGCG 388
consensus_11411#2 GATAGTACGGAA-CCGATACAACGTC-TGCGCCGCCTTGGAT--AGCTTCTTCTCACCCC 380
consensus_11411#0 AAGATTGTTGCTCTCAAGAAGGTGCGGTTTGTCAATTTGGATCCTGAAAGTGTGCGCTTT 960
* * * * * * * * *
consensus_11411#1 ACCAAGAGAGAAGAAGTCGAGAC--AACTCCGGTA-AGGATGATTG--GTCCTTCAAAAC 443
consensus_11411#2 ATCTGAGCACTCAAACCCTTTCCTTAATGACTCTACGGGGGGGTCG--ATCTGCTGAGCC 438
consensus_11411#0 ATGGCAAGAGAAATACTTGTTCTTCGGAAACTGAATCATCCGAATGTCATAAAGTTGGAA 1020
* * * * * * * *
consensus_11411#1 TGG--CAAAGATGCAGCTTGGACATCA---T-CACCCATGGGATCCCTGACGTGGAGGAC 497
consensus_11411#2 CGGACTCCGGCGACGACCGGCGCAGCG---TTCGGCGGGGGGCTTCCCTACAGAGGAGGC 495
consensus_11411#0 GGGATCATAGCATCTCCTGTTTCAACAAGTTTGTATCTTGTATTTGAATACATGGAACAT 1080
** * * * ** * * * * ** *
consensus_11411#1 GAGCCGTGTGGTGTAGCTTGGATGGACGGCAT-TGAAATCTTCCACGGCCAACGACATGC 556
consensus_11411#2 TAG------GGTGGA---TAAGTGGATGGCCTCTTATCTCCCGAACCCTTGGCGACTGAC 546
consensus_11411#0 GACCTTACTGGTCTTGCTGCAACTCCAGGCCTCAAGTTCACTGAACCACAGGTAAAGTGC 1140
* *** *** * ** * *
consensus_11411#1 TTGT-GCGTGC----------GACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCC 605
consensus_11411#2 GTGCCGCGCCG----------CGTTTTCGCCATTAGTGGAGCCCTACAGAG-ACCGGCAA 595
consensus_11411#0 TTGATGCAACAATTGCTTAGTGGCCTTGATCACTGCCACAGCAATGGAGTTCTTCATCGA 1200
** ** ** ** * * *
consensus_11411#1 AAC--ATGGAATTCCTCTGCCTTTCTTTCT-GTAAC-ACTTCCAGCAAATGCAAAGCTGA 661
consensus_11411#2 AAG--AGAGAGCCCCCGGGAAGAGCGCGAC-GCGGCGACGTTCGTCGAGCGGATAAT--- 649
consensus_11411#0 GACTTGAAGGGTTCCAACCTCTTGATTGACAGCAATGGTGTCTTGAAGATTGCAGACTTT 1260
* * ** * *
consensus_11411#1 ATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCT-GCCATTTTTCTTCAGGTA 720
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GGTCTAGCAACATTTTATGATCCTAACAATCAGCAACCACTCACAAGCCGTGTTGCAACA 1320
consensus_11411#1 GTATGAGGTCGTCTGCAAAAAAAACT-CTTTGCCCTGTTGGCTATGGCGTTTATTTATAG 779
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TTGTGGTACAGGCCACCGGAACTTCTGCTTGGTGCCACTAAGTATGGAGTTTCTGTGGAT 1380
consensus_11411#1 ATCCTTTTGAGCCATCTGTCAGGTTGCTTGCGGTCCTTATAAAAAATTTATTGATTTGTG 839
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 ATG-TGGAGTACTGGGTGCATTCTGGCAGAATTGCTTGCTAGCAAGCCAATCATGCCAGG 1439
consensus_11411#1 AATAAAAAA--------------------------------------------------- 848
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 AAGAACTGAGGTAGAGCAAATTCACAAGATCTTCAAGCTCTGTGGATCACCCTCTGATGA 1499
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GTACTGGCAGAAACTGAACGTGCCCCAGACAGGGATGTTCAAGCCCTCTCGCCAGTATAG 1559
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GCGGTGTATTGCAGATAATTTCAAACATTTCCCTCAGCCAGCTATAGTTCTTCTAGATAA 1619
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TTTGCTTGCATTAGAACCAGAAGCTCGTGGAACAGCTGCCTCGACTCTCCAGAGTGACTT 1679
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TTTCAGAAGAAAGCCACTTGCTTGCAGCCCTTCAAGCTTACCAAAGTTTCCACCGAGCAA 1739
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 AGAATACGATGCAAGACTCAAGCTAGAGGAAGCTAGGAGGCAAAGAAAGGTTGGAGGATC 1799
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TGTTAGACCTGGAAGAGAGAACGTTAGAATAAATCGTGGTAATGGCTCTATCCAACCAAA 1859
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GAAACATACATATATCAGTGGAAATCTCCACCCGCAAGGTGATCCACGGACATTAGCTAC 1919
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 AAGGGTGCGATCTCCTGGACTTAACGCCACATGGAACAACAGGGGTGATTCAATGACGGT 1979
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CGTGAAGTACCTGGATGTAAGTACAACTCTGTGCGGATAGCATATTCCACTATCTTGACG 2039
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 ACAAGGAGCTCAGACTTGCTTCAACCTGAACCAACTGATGTAATGAATAAGATGCATGGT 2099
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TCTCCCAAGAACGACCTGGGAGAGAAGGGCCAGACTGGGAGCTGTAGGGTTAAGAACAGA 2159
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 ACGCATCACTCTGGTTCACTGGTTACACCAGAAGGAAACATAGAGGAGATGCTCAAGGAG 2219
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CATGACAGGAACATCCAAGCAGCCATGCGCAAAGCACGCCTTAACAAGAAGAAATAGTTG 2279
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TGACATTTAGGTGTGTTCAAGCTAAAGATCCCAACTTTTCCAAGTTCCAGTTGAGGAATG 2339
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GCAGGGCTGCATTCTTGCACAGAGCACAGAGCTTCTTCAAAAGGATCAAGATCAAACCTG 2399
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 AAATGTCGATACAATACGAGAGTTTGGGCATGGACATTATTTCAAATGACAGGTTGTCCT 2459
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TTGAACCTGAAATTCTTGACTGATGGCAGTGAGAGATCCAGATCATGCCGGAGCAACTAA 2519
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 GAAGAAATTTCGACAACATTGAGTCATGGATAGGTACATCTTACAGTTACAAAGTATGAG 2579
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CAGCACTGCGGAAGAGGAGGCCAAACAGAGTGCCAGGGATATCCGAAAGCGTAGACTGGC 2639
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CTTTATTCTTGCCTGAATTCTTGTTTCACCAAGCTTCTGTGGTCTTTCCCCTTGTTATGG 2699
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 CTGTTCTAACCCATGCCATCTGCATCTGGTGTTGCTAGACGGGCTTGTATAAACTTTTCA 2759
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TCCTCTTATTTCTCTTGTTTTTCTTCTTGCAAGGGTCTTATATAAACTGTGCATTCTTTG 2819
consensus_11411#1 ------------------------------------------------------------
consensus_11411#2 ------------------------------------------------------------
consensus_11411#0 TCCAGTTTTTTGGCTGTGTGCATTCTATGCAGAGGCCGGGGGTGGACTCAGTTGGAATGT 2879
consensus_11411#1 -------------------------------------
consensus_11411#2 -------------------------------------
consensus_11411#0 ATCATCTTGGTGTATTTAACTGAGTCTTAATAAAACT 2916
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||