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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11414#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2380 fasta sequence
[CTCGCCTCGCCTCGCCGCGCCGCCGCGCCGCCCCAGATCCGCCCCGCCTCCGGCCATCCCCGCCGCCAGATCCGGTGGGGGAAGCCCCCTCTCTCCGCTCTCGCCCAAGGGGGGGTTGGTTTATCCGGTAGGAGGAGGAGTAGTGAGGTGGTGGTAGTGGTTTAAGCGGCCATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTATGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCGGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGGCTCCAAGCAAAGTCATGGATGTCTTCATTAAGGCTGCAGAGTATATGGAGATGCCAGTCCGGCGCAGTGACGATGAACCCTTGCAGAAATTATTTGTAGCTGTTAGGAGTGAATTAAATCTAGACTTGAAGAATATTAGAACAGAACAAGCTAAATTCTGGAAGCAGCATCCATCTCTAGTGAAGATGGAGCTTTTGATTCAGGCTCACCTCACTGGAGAGTCATTTGCTTTGACACCAGCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTGTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCGGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG-GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGCTACCAAAGTTACCATTTTTGTTTAATATTGTTGTGTTGGATGAATGA]
[+] EMBL AK070019 [CTCGCCTCGCCTCGCCGCGCCGCCGCGCCGCCCCAGATCCGCCCCGCCTCCGGCCATCCCCGCCGCCAGATCCGGTGGGGGAAGCCCCCTCTCTCCGCTCTCGCCCAAGGGGGGGTTGGTTTATCCGGTAGGAGGAGGAGTAGTGAGGTGGTGGTAGTGGTTTAAGCGGCCATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTATGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCGGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGGCTCCAAGCAAAGTCATGGATGTCTTCATTAAGGCTGCAGAGTATATGGAGATGCCAGTCCGGCGCAGTGACGATGAACCCTTGCAGAAATTATTTGTAGCTGTTAGGAGTGAATTAAATCTAGACTTGAAGAATATTAGAACAGAACAAGCTAAATTCTGGAAGCAGCATCCATCTCTAGTGAAGATGGAGCTTTTGATTCAGGCTCACCTCACTGGAGAGTCATTTGCTTTGACACCAGCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTGTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCGGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCGAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGCTACCAAAGTTACCATTTTTGTTTAATATTGTTGTGTTGGATGAATGA]
[+] EMBL CB630333 [ AGGTGGCGGTAGTGGTTTAAGCGGCCATGGCGGCGGCGGAGGAGAACAGCTCACTGTTCCTCATATTCATCCTCACCATGATCGCTCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATTCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTATGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCGGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGGCTCCAAGCAAAGTCATG ]
[+] EMBL CB637406 [ CCATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAAT ]
[+] EMBL C28896 [ TCTCTGGATAGTNATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCANAGTCTGATATCAAGAAATCATACCGTAGACTTTNTATCCAATACCATCCTGATAAAANTCCTGATCCTGAGGCCCACAAGTACTTTTTTGANTTTNTATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGANGTATGGTCACCCng ]
[+] EMBL CB000734 [ AGAGTCATTTGCTTTGACACCAGCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTGTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCGGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTA ]
[+] EMBL CF304684 [ TGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTA ]
[+] EMBL AK059187 [ CTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGC ]
[-] EMBL CB630334 [ AAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGGTTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGATGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGCT ]
[+] EMBL AU071236 [ TATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCA CCGGNGCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||