These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11424#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 595 fasta sequence [ACGAGCCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC-CGAGGCGGAGACGAAGGCGATGATCACC-CTCCGCAGCTGCGAGGGC-CAGGTGTTCGAGGTCGCGGAGGCC-GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCCGCCGCCGACGGCGACGCCCCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGAAGACCCCCCCCCCCCCCCCC] [+] EMBL BP184895 [ACGAGGCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCCGCCGCCGACGGCGACGCCCCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGAAGACCCCCCCCCCCCCCCCC] [+] EMBL AU082411 [ CCGATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGG ] [+] EMBL AU082412 [ CCGATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGAAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGC ] [+] EMBL BI799594 [ aatCTATTCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGC ] [+] EMBL BI797829 [ TCCATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGCGGCACGAGGCGGAGACGAAGGCGATGATCACCACTCCGCAGCTGCGAGGGCACAGGTGTTCGAGGTCGCGGAGGCCAGTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGcg ] [+] EMBL BI798025 [ ATCGCTTTCTAGGGTTTGTTCTCTCGTCGATCCGATGGC GC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCC ACGTCATCGAGTACTGCAGCAAGCACGTCGAGGCGCG ] [+] EMBL C97213 [ AGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGTTGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGTCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTTGAGGCG ] [+] EMBL AU082358 [ AGGGTTTGTTCTCTCGTCGATCCGATGGCGGC CGAGGCGGAGACGAAGGCGATGATCACC CTCCGCAGCTGCGAGGGC CAGGTGTTCGAGGTCGCGGAGGCC GTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGC ] [-] EMBL C99448 [ CCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||