Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11437 cluster # 11437       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11437#0 length = 1990 sequences # 5  
consensus_11437#1 length = 1624 sequences # 1  
consensus_11437#2 length = 1548 sequences # 2  
consensus_11437#3 length = 453 sequences # 1  

consensusID : consensus_11437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1990
fasta sequence
                              [TCCTCNCCCAGGTCGTCTCCNCCNCCGGGCTCANCCCAGNCTGGCCACCGATGATGATNGCGACGGCCGCGATGGCGGCGAGCTCGTGCGATCGAGGCGACACGCGTAAGAAGCTGCAGATAACTGTAGTTTTCCTCGTCCGCACGCTACNGCTCGCGTGTATAATAGCCCGCGGGGTGCTCGCGCTGATACGGGTTGCGTTCCGCGTCGCCGTGGTTGCTCCGGCGAGAAGCCTCGTCGCCGTCGCGGGCGCCGCCTTCTCCGCCGTGAACNCGCGGTGCGCGTGGTGCCTGGAACAGGCGGCGCTCGGGCGGAGCTGCACGGGGACGGTCCTCGGCGACGCGGTGGTGGGCGCCATGGCGAGCTCGTGGAGGCTGCTGCTGCAGGGGATCACGTCGCTGGTGTTCCTGTGCGCGCGTGGCGCCGACGAGTACGTCCGGCCGCCACCGAGCCCGCTGGTGCTCACGGCGCACGGCAAGCCGGCGTCGCATCCTCAGCAGGTGCACATTTCGATGGTGGGGGAGAAGAACATGAGGATTTCATGGGTGACCGACGACCTGAACGCGCCGTCCGTGGTGGAGTACGGGACGTCGCCGGGGAAGTACACGGCGTCGGCGACCGGCGACCACACCACGTACCGCTACTTCCTCTACAAGTCCGGCGCGATCCACCACGCCACCATCGGCCCGCTCGAGGCGAGCACGACGTACCACTACCGGTGCGGCAAGGCCGGCGACGAGTTCACCCTCAGGACGCCTCCGGCGAGGCTGCCTGTGGAGTTCGTCGTGGTCGGCGACCTCGGGCAGACGAAGTGGACGGCGTCGACGCTGTCCCACATCGGCGGCGGCGGCGGCGACTACGACGTGCTGCTGCTCCCCGGCGACCTGTCGTACGCCGACACGCAGCAGCCGCTGTGGGACACGTTCGGGCGGCTGGTGCAGCCGCTGGCGAGCGCGCGGCCGTGGATGGTGACGGAGGGGAACCACGAGATCGAGGCGCTGCCGGTGGTGGGGATCGCGCCGTTCGCGGCGTACAACGCGCGGTGGCGGATGCCGCGGGAGGAGAGCGGCTCGCCGTCGAACCTCTACTACTCGTTCGACGCGGCGGGCGGCGCGGCGCACGTGGTGATGCTGGGATCCTACGCGGAGTTCGAGGAAGGGTCGCCGCAGCGGGCGTGGCTGGAGCGGGACCTCGCCGGCGTCGACCGGCGGCGGACGCCGTGGCTGCTGGCGCTGGTGCACGCGCCGTGGTACAACACGAACGAGGCGCACCAGGGCGAGGGCGAGCGGATGCGCCGCGCCATGGAGAGCCTCCTCTACGAGGCCCGCGTCGACGTCGTCTTCGCCGGCCACGTCCACGCCTACGAGCGCTTCACGAGGATCTACGACAACGAGGCTGACAGCCGGGGCCCAATGTACATCACCATTGGCGACGGGGGCAACAGGGAAGGCCTTGCTCTCAAGTTCATCAAGGGGCACAAGTCGGCGCACCTGTCGGAGTTCAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGGGTCCTGAACGAGACGAGCGCCGTCTGGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAGCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGCCGGCGGCGGCGGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATATCTCACACTGTTAAGAATGAATGGAAGAAAAGGAAACTTCACCACATTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAACATTGTCCATTTGTCCTTGTAAATCAATCGTGATATCGTGTGTTTCAGCTAGTGTACAGTGTTTTTCTTGTGTTAGACACGTGGTGAAATAGAATTTCAGTGTACAAGGCCAACACTGATGGGCTCATCTTTTCGCTTATACTATTTATACTTATCATCCAAAATTTGAAGTTTCAGCTTTCAAAAAAAA]

[+] EMBL AU056219             [TCCTCNCCCAGGTCGTCTCCNCCNCCGGGCTCANCCCAGNCTGGCCACCGATGATGATNGCGACGGCCGCGATGGCGGCGAGCTCGTGCGATCGAGGCGACACGCGTAAGAAGCTGCAGATAACTGTAGTTTTCCTCGTCCGCACGCTACNGCTCGCGTGTATAATAGCCCGCGGGGTGCTCGCGCTGATACGGGTTGCGTTCCGCGTCGCCGTGGTTGCTCCGGCGAGAAGCCTCGTCGCCGTCGCGGGCGCCGCCTTCTCCGCCGTGAACNC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK073222             [                                                                                                                                                                                                        TTCCGCGTCGCCGTGGTTGCTCCGGCGAGAAGCCTCGTCGCCGTCGCGGGCGCCGCCTTCTCCGCCGTGAACGCGCGGTGCGCGTGGTGCCTGGAACAGGCGGCGCTCGGGCGGAGCTGCACGGGGACGGTCCTCGGCGACGCGGTGGTGGGCGCCATGGCGAGCTCGTGGAGGCTGCTGCTGCAGGGGATCACGTCGCTGGTGTTCCTGTGCGCGCGTGGCGCCGACGAGTACGTCCGGCCGCCACCGAGCCCGCTGGTGCTCACGGCGCACGGCAAGCCGGCGTCGCATCCTCAGCAGGTGCACATTTCGATGGTGGGGGAGAAGAACATGAGGATTTCATGGGTGACCGACGACCTGAACGCGCCGTCCGTGGTGGAGTACGGGACGTCGCCGGGGAAGTACACGGCGTCGGCGACCGGCGACCACACCACGTACCGCTACTTCCTCTACAAGTCCGGCGCGATCCACCACGCCACCATCGGCCCGCTCGAGGCGAGCACGACGTACCACTACCGGTGCGGCAAGGCCGGCGACGAGTTCACCCTCAGGACGCCTCCGGCGAGGCTGCCTGTGGAGTTCGTCGTGGTCGGCGACCTCGGGCAGACGAAGTGGACGGCGTCGACGCTGTCCCACATCGGCGGCGGCGGCGGCGACTACGACGTGCTGCTGCTCCCCGGCGACCTGTCGTACGCCGACACGCAGCAGCCGCTGTGGGACACGTTCGGGCGGCTGGTGCAGCCGCTGGCGAGCGCGCGGCCGTGGATGGTGACGGAGGGGAACCACGAGATCGAGGCGCTGCCGGTGGTGGGGATCGCGCCGTTCGCGGCGTACAACGCGCGGTGGCGGATGCCGCGGGAGGAGAGCGGCTCGCCGTCGAACCTCTACTACTCGTTCGACGCGGCGGGCGGCGCGGCGCACGTGGTGATGCTGGGATCCTACGCGGAGTTCGAGGAAGGGTCGCCGCAGCGGGCGTGGCTGGAGCGGGACCTCGCCGGCGTCGACCGGCGGCGGACGCCGTGGCTGCTGGCGCTGGTGCACGCGCCGTGGTACAACACGAACGAGGCGCACCAGGGCGAGGGCGAGCGGATGCGCCGCGCCATGGAGAGCCTCCTCTACGAGGCCCGCGTCGACGTCGTCTTCGCCGGCCACGTCCACGCCTACGAGCGCTTCACGAGGATCTACGACAACGAGGCTGACAGCCGGGGCCCAATGTACATCACCATTGGCGACGGGGGCAACAGGGAAGGCCTTGCTCTCAAGTTCATCAAGGGGCACAAGTCGGCGCACCTGTCGGAGTTCAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGGGTCCTGAACGAGACGAGCGCCGTCTGGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAGCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGCCGGCGGCGGCGGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATATCTCACACTGTTAAGAATGAATGGAAGAAAAGGAAACTTCACCACATTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAACATTGTCCATTTGTCCTTGTAAATCAATCGTGATATCGTGTGTTTCAGCTAGTGTACAGTGTTTTTCTTGTGTTAGACACGTGGTGAAATAGAATTTCAGTGTACAAGGCCAACACTGATGGGCTCATCTTTTCGCTTATACTATTTATA                                        ]
[+] EMBL CB671431             [                                                                                                                                                                                                                                                                                                                                                                                                                     TCCTGTCCTCGCGTGGCGCCGACGAGTACGTCCGGCCGCCACCGAGCCCGCTGGTGCTCACGGCGCACGGCAAGCCGGCGTCGCATCCTCAGCAGGTGCACATTTCGATGGTGGGGGAGAAGAACATGAGGATTTCATGGGTGACCGACGACCTGAACGCGCCGTCCGTGGTGGAGTACGGGACGTCGCCGGGGAAGTACACGGCGTCGGCGACCGGCGACCACACCACGTACCGCTACTTCCTCTACAAGTCCGGCGCGATCCACCACGCCACCATCGGCCCGCTCGAGGCGAGCACGACGTACCACTACCGGTGCGGCAAGGCCGGCGACGAGTTCACCCTCAGGACGCCTCCGGCGAGGCTGCCTGTGGAGTTCGTCGTGGTCGGCGACCTCGGGCAGACGAAGTGGACGGCGTCGACGCTGTCCCACATCGGCGGCGGCGGCGGCGACTACGACGTGCTGCTGCTCCCCGGCGACCTGTCGTACGCCGACACGCAGCAGCCGCTGTGGGACACGTTCGGGCGGCTGGTGCAGCCGCTGGCGAGCGCGCGGCCGTGGATGGTGACGGAGGGGAACCACGAGATCGAGGCGCTGCCGGTGGTGGGGATCGCGCCGTTCGCGGCGTACAACGCGCGGTGGCGGATGCCGCGGGAGGAGAGCGGCTCGCCGTCGAACCTCTACTACTCGTTCGACGCGGCGGGCGGCGCGGCGCACGTGGTGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB671432             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGTACAACACGAACGAGGCGCACCAGGGCGAGGGCGAGCGGATGCGCCGCGCCATGGAGAGCCTCCTCTACGAGGCCCGCGTCGACGTCGTCTTCGCCGGCCACGTCCACGCCTACGAGCGCTTCACGAGGATCTACGACAACGAGGCTGACAGCCGGGGCCCAATGTACATCACCATTGGCGACGGGGGCAACAGGGAAGGCCTTGCTCTCAAGTTCATCAAGGGGCACAAGTCGGCGCACCTGTCGGAGTTCAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGGGTCCTGAACGAGACGAGCGCCGTCTGGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAGCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGCCGGCGGCGGCGGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATATCTCACACTGTTAAGAATGAATGGAAGAAAAGGAAACTTCACCACATTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAACATTGTCCATTTGTCCTTGTAAATCAATCGTGATATCGTGTGTTTCAGCTAGTGTACAGTGTTTTTCTTGTGTTAGACACGTGGTGAAATAGAATTTCAGTGTACAAGGCCAACACTGATGGGCTCATCTTTTCGCTTATACTATTTATACTTATCATCCAAAATTTGAAGTTTCAGCTTTCAA      ]
[+] EMBL AU173882             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGTCTGGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAGCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGCCGGCGGCGGCGGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATATCTCACNCTGTTAAGAATGAATGGAAGAAAAGGAAACTTCNCCACATTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAACATTGTCCATTTGTCCTTGTAAATCAATCGTGATATCGTGTGTTTCAGCTAGTGTACAGTGTTTTTCTTGTGTTAGACACGTGGTGAAATAGAATTTCAGTGTACAAGGCCAACACTGATGGGCTCATCTTTTCGCTTATACTATTTATACTTATCATCCAAAATTTGAAGTTTCAGCTTTCAAAAAAAA]


>consensus_11437#0 TCCTCNCCCAGGTCGTCTCCNCCNCCGGGCTCANCCCAGNCTGGCCACCGATGATGATNG CGACGGCCGCGATGGCGGCGAGCTCGTGCGATCGAGGCGACACGCGTAAGAAGCTGCAGA TAACTGTAGTTTTCCTCGTCCGCACGCTACNGCTCGCGTGTATAATAGCCCGCGGGGTGC TCGCGCTGATACGGGTTGCGTTCCGCGTCGCCGTGGTTGCTCCGGCGAGAAGCCTCGTCG CCGTCGCGGGCGCCGCCTTCTCCGCCGTGAACNCGCGGTGCGCGTGGTGCCTGGAACAGG CGGCGCTCGGGCGGAGCTGCACGGGGACGGTCCTCGGCGACGCGGTGGTGGGCGCCATGG CGAGCTCGTGGAGGCTGCTGCTGCAGGGGATCACGTCGCTGGTGTTCCTGTGCGCGCGTG GCGCCGACGAGTACGTCCGGCCGCCACCGAGCCCGCTGGTGCTCACGGCGCACGGCAAGC CGGCGTCGCATCCTCAGCAGGTGCACATTTCGATGGTGGGGGAGAAGAACATGAGGATTT CATGGGTGACCGACGACCTGAACGCGCCGTCCGTGGTGGAGTACGGGACGTCGCCGGGGA AGTACACGGCGTCGGCGACCGGCGACCACACCACGTACCGCTACTTCCTCTACAAGTCCG GCGCGATCCACCACGCCACCATCGGCCCGCTCGAGGCGAGCACGACGTACCACTACCGGT GCGGCAAGGCCGGCGACGAGTTCACCCTCAGGACGCCTCCGGCGAGGCTGCCTGTGGAGT TCGTCGTGGTCGGCGACCTCGGGCAGACGAAGTGGACGGCGTCGACGCTGTCCCACATCG GCGGCGGCGGCGGCGACTACGACGTGCTGCTGCTCCCCGGCGACCTGTCGTACGCCGACA CGCAGCAGCCGCTGTGGGACACGTTCGGGCGGCTGGTGCAGCCGCTGGCGAGCGCGCGGC CGTGGATGGTGACGGAGGGGAACCACGAGATCGAGGCGCTGCCGGTGGTGGGGATCGCGC CGTTCGCGGCGTACAACGCGCGGTGGCGGATGCCGCGGGAGGAGAGCGGCTCGCCGTCGA ACCTCTACTACTCGTTCGACGCGGCGGGCGGCGCGGCGCACGTGGTGATGCTGGGATCCT ACGCGGAGTTCGAGGAAGGGTCGCCGCAGCGGGCGTGGCTGGAGCGGGACCTCGCCGGCG TCGACCGGCGGCGGACGCCGTGGCTGCTGGCGCTGGTGCACGCGCCGTGGTACAACACGA ACGAGGCGCACCAGGGCGAGGGCGAGCGGATGCGCCGCGCCATGGAGAGCCTCCTCTACG AGGCCCGCGTCGACGTCGTCTTCGCCGGCCACGTCCACGCCTACGAGCGCTTCACGAGGA TCTACGACAACGAGGCTGACAGCCGGGGCCCAATGTACATCACCATTGGCGACGGGGGCA ACAGGGAAGGCCTTGCTCTCAAGTTCATCAAGGGGCACAAGTCGGCGCACCTGTCGGAGT TCAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGGGTCCTGAACGAGACGAGCGCCGTCT GGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACA GCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGCCGGCGGCGGCGGCGGCC ATCCGGCCGACGAGCTGTAGGCTATATATATCTCACACTGTTAAGAATGAATGGAAGAAA AGGAAACTTCACCACATTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAA CATTGTCCATTTGTCCTTGTAAATCAATCGTGATATCGTGTGTTTCAGCTAGTGTACAGT GTTTTTCTTGTGTTAGACACGTGGTGAAATAGAATTTCAGTGTACAAGGCCAACACTGAT GGGCTCATCTTTTCGCTTATACTATTTATACTTATCATCCAAAATTTGAAGTTTCAGCTT TCAAAAAAAA



consensusID : consensus_11437#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1624
fasta sequence
                              [TTCTATAGGGGTTGCTTCCACTTGCCTAGATACGACGCGCCAAGGAAGATGACGCGTCGCGCTGATGATCTCCTGGTTGCCGGAACGCTCGTCATCTCCATCGTCTTCTTCAGGTGCGCCGCTGCCGTGGCAGCCACCGAGTATGTCCGGCCTCCCCCCGGGCGGGTCATCTTCACTGAGCACACCAAGCCCGCCTCACATCCTCAACAGGTTCATGTGTCGCTCGTCGGGGCGAACCATATGAGAGTGTCATGGATCACGGAGGACAAGCACGTCAAGTCCGTGGTGGAGTATGGCAAGGTCTCCGGGAACTACACGGCGTCGGCCACCGGCGAGCACACATCCTACCGCTACTTCCTCTACTCCTCCGGCAAGATCCACCACGTCAAGATCGGACCGCTGGATCCCGGCACGGTGTACTACTACCGGTGCGGCATGGCCGGCGACGAGTTCGGCCTCAGGACCCCGCCGGCCGCGCTCCCAGTCGAGCTCGCCGTCGCGGGGGATCTTGGGCAGACCGAGTGGACGGCGTCGACGCTGTCCCACGTCGGCAGGTCCGACTACGACGTGCTGCTGGTTCCCGGCGACCTGTCCTACGCCGACGCCCAGCAGCCGCTGTGGGACTCGTTCGGCCGGTTCGTGCAGAAGTACGCGAGCCGGCGGCCATGGATGGTCACCGAAGGGAACCACGAGGTGGAGGCCGCGATGGCGCTCCCGGGCTGGCCGCGGCCGTTCACGGCGTACGCCGCGCGGTGGCGGATGCCGTACGAGGAGAGCGGCTCGGGGACCAGCCTCTACTACTCCTTCGACGCCGCCGGCGGCGCCGTCCACGTCGTCATGCTCGGCTCGTACGCCGACTTCAACTCGAGCTCGGAGCAGTACAGGTGGCTGGCCCGCGACCTCGCCGCCGTCGACCGCGGCGCGACGCCCTGGGTCGTGGTGCTGCTGCACGCGCCCTGGTACAACACGAACGCGGCGCACGAGGGGGAGGGCGAGGCCATGAGGAAGGCCATGGAGCGCCTCCTCTACGAGGCCCGCGTCGACATCGTCTTCGCCGGCCATGTCCACGCCTACGAACGCTTCACAAGGGTATATAACAACGAGGCGAACCCGTGTGGACCGGTGCACATCACCATAGGCGACGGCGGCAACAGGGAAGGCCTCGCATTTGACTTTCGGAAGAACCACAAGCTGGCGCCGCTCTCGTTGATGAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGCGTGGTGAACGCGACCGCCGCGCGCTGGACGTGGCACCGCAACGACGACGCCGACTCCACCGTGCGCGACGAGATCTGGCTGGAGAGCCTGGCTGCCAACGGCGCGTGCCAGCAGAGTAGCAGCGCCGCCGCCGCCGCGGACTCTCAGAACGACGAGTTGTAGCATTGCACATTGCTTGATATTAATTCAACAAATTAATTTGATAGCGCTCTTAATTTGCTTGTCACGTGCCGGTGAACCTGGGTGCTTACTTTACGGGCAAACAATGCATTTGTACCATAGTGTGGTTAGTGGCCAGTAGTGCTTAGGCCGGCGGCATTTGCCGTGCCTCTGATAGCTAGAACGAACAACTTCTGTGCCTGTTTGTGGGTGTAATCAT]

[+] EMBL AK121649             [TTCTATAGGGGTTGCTTCCACTTGCCTAGATACGACGCGCCAAGGAAGATGACGCGTCGCGCTGATGATCTCCTGGTTGCCGGAACGCTCGTCATCTCCATCGTCTTCTTCAGGTGCGCCGCTGCCGTGGCAGCCACCGAGTATGTCCGGCCTCCCCCCGGGCGGGTCATCTTCACTGAGCACACCAAGCCCGCCTCACATCCTCAACAGGTTCATGTGTCGCTCGTCGGGGCGAACCATATGAGAGTGTCATGGATCACGGAGGACAAGCACGTCAAGTCCGTGGTGGAGTATGGCAAGGTCTCCGGGAACTACACGGCGTCGGCCACCGGCGAGCACACATCCTACCGCTACTTCCTCTACTCCTCCGGCAAGATCCACCACGTCAAGATCGGACCGCTGGATCCCGGCACGGTGTACTACTACCGGTGCGGCATGGCCGGCGACGAGTTCGGCCTCAGGACCCCGCCGGCCGCGCTCCCAGTCGAGCTCGCCGTCGCGGGGGATCTTGGGCAGACCGAGTGGACGGCGTCGACGCTGTCCCACGTCGGCAGGTCCGACTACGACGTGCTGCTGGTTCCCGGCGACCTGTCCTACGCCGACGCCCAGCAGCCGCTGTGGGACTCGTTCGGCCGGTTCGTGCAGAAGTACGCGAGCCGGCGGCCATGGATGGTCACCGAAGGGAACCACGAGGTGGAGGCCGCGATGGCGCTCCCGGGCTGGCCGCGGCCGTTCACGGCGTACGCCGCGCGGTGGCGGATGCCGTACGAGGAGAGCGGCTCGGGGACCAGCCTCTACTACTCCTTCGACGCCGCCGGCGGCGCCGTCCACGTCGTCATGCTCGGCTCGTACGCCGACTTCAACTCGAGCTCGGAGCAGTACAGGTGGCTGGCCCGCGACCTCGCCGCCGTCGACCGCGGCGCGACGCCCTGGGTCGTGGTGCTGCTGCACGCGCCCTGGTACAACACGAACGCGGCGCACGAGGGGGAGGGCGAGGCCATGAGGAAGGCCATGGAGCGCCTCCTCTACGAGGCCCGCGTCGACATCGTCTTCGCCGGCCATGTCCACGCCTACGAACGCTTCACAAGGGTATATAACAACGAGGCGAACCCGTGTGGACCGGTGCACATCACCATAGGCGACGGCGGCAACAGGGAAGGCCTCGCATTTGACTTTCGGAAGAACCACAAGCTGGCGCCGCTCTCGTTGATGAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGCGTGGTGAACGCGACCGCCGCGCGCTGGACGTGGCACCGCAACGACGACGCCGACTCCACCGTGCGCGACGAGATCTGGCTGGAGAGCCTGGCTGCCAACGGCGCGTGCCAGCAGAGTAGCAGCGCCGCCGCCGCCGCGGACTCTCAGAACGACGAGTTGTAGCATTGCACATTGCTTGATATTAATTCAACAAATTAATTTGATAGCGCTCTTAATTTGCTTGTCACGTGCCGGTGAACCTGGGTGCTTACTTTACGGGCAAACAATGCATTTGTACCATAGTGTGGTTAGTGGCCAGTAGTGCTTAGGCCGGCGGCATTTGCCGTGCCTCTGATAGCTAGAACGAACAACTTCTGTGCCTGTTTGTGGGTGTAATCAT]


>consensus_11437#1 TTCTATAGGGGTTGCTTCCACTTGCCTAGATACGACGCGCCAAGGAAGATGACGCGTCGC GCTGATGATCTCCTGGTTGCCGGAACGCTCGTCATCTCCATCGTCTTCTTCAGGTGCGCC GCTGCCGTGGCAGCCACCGAGTATGTCCGGCCTCCCCCCGGGCGGGTCATCTTCACTGAG CACACCAAGCCCGCCTCACATCCTCAACAGGTTCATGTGTCGCTCGTCGGGGCGAACCAT ATGAGAGTGTCATGGATCACGGAGGACAAGCACGTCAAGTCCGTGGTGGAGTATGGCAAG GTCTCCGGGAACTACACGGCGTCGGCCACCGGCGAGCACACATCCTACCGCTACTTCCTC TACTCCTCCGGCAAGATCCACCACGTCAAGATCGGACCGCTGGATCCCGGCACGGTGTAC TACTACCGGTGCGGCATGGCCGGCGACGAGTTCGGCCTCAGGACCCCGCCGGCCGCGCTC CCAGTCGAGCTCGCCGTCGCGGGGGATCTTGGGCAGACCGAGTGGACGGCGTCGACGCTG TCCCACGTCGGCAGGTCCGACTACGACGTGCTGCTGGTTCCCGGCGACCTGTCCTACGCC GACGCCCAGCAGCCGCTGTGGGACTCGTTCGGCCGGTTCGTGCAGAAGTACGCGAGCCGG CGGCCATGGATGGTCACCGAAGGGAACCACGAGGTGGAGGCCGCGATGGCGCTCCCGGGC TGGCCGCGGCCGTTCACGGCGTACGCCGCGCGGTGGCGGATGCCGTACGAGGAGAGCGGC TCGGGGACCAGCCTCTACTACTCCTTCGACGCCGCCGGCGGCGCCGTCCACGTCGTCATG CTCGGCTCGTACGCCGACTTCAACTCGAGCTCGGAGCAGTACAGGTGGCTGGCCCGCGAC CTCGCCGCCGTCGACCGCGGCGCGACGCCCTGGGTCGTGGTGCTGCTGCACGCGCCCTGG TACAACACGAACGCGGCGCACGAGGGGGAGGGCGAGGCCATGAGGAAGGCCATGGAGCGC CTCCTCTACGAGGCCCGCGTCGACATCGTCTTCGCCGGCCATGTCCACGCCTACGAACGC TTCACAAGGGTATATAACAACGAGGCGAACCCGTGTGGACCGGTGCACATCACCATAGGC GACGGCGGCAACAGGGAAGGCCTCGCATTTGACTTTCGGAAGAACCACAAGCTGGCGCCG CTCTCGTTGATGAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGCGTGGTGAACGCGACC GCCGCGCGCTGGACGTGGCACCGCAACGACGACGCCGACTCCACCGTGCGCGACGAGATC TGGCTGGAGAGCCTGGCTGCCAACGGCGCGTGCCAGCAGAGTAGCAGCGCCGCCGCCGCC GCGGACTCTCAGAACGACGAGTTGTAGCATTGCACATTGCTTGATATTAATTCAACAAAT TAATTTGATAGCGCTCTTAATTTGCTTGTCACGTGCCGGTGAACCTGGGTGCTTACTTTA CGGGCAAACAATGCATTTGTACCATAGTGTGGTTAGTGGCCAGTAGTGCTTAGGCCGGCG GCATTTGCCGTGCCTCTGATAGCTAGAACGAACAACTTCTGTGCCTGTTTGTGGGTGTAA TCAT



consensusID : consensus_11437#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1548
fasta sequence
                              [CAATATCGTCGACTGATCGATTTGGGCGAGAGACGACTTTTGTGAGCTTGTGACCATATGGCAATGGCGAGCGTAGCAGCGTTGCGTCTCGTCGTCCTCCTCGCCGCCGCCGTGCCGCTGCTGCCGCCGCCGGCGGCATCGCTGGCCGTGACGTCGACGTACGTGCGGCCGACGGCGAGGGCGACGCTGTCCGTGCTCCACGACGGCTATGGCCGAACGCCGCAGCAGGTGCATATATCAGCTGTAGGCTCTGACAAGATGAGGGTGACGTGGATCACCGACGACGACGCGCCGGCCACCGTGGAGTACGGCACGGTCTCCGGCGAGTACCCATTCTCGGCGGCCGGAAACACCACCACCTACTCCTACGTCCTCTACCACTCCGGCAACATCCACGACGTCGTCATCGGCCCACTCAAACCCAGCACCACCTACTTCTACCGCTGCAGCAACGACACGTCGCGCGAGCTCTCCTTCCGTACGCCGCCGGCGAGCCTCCCGTTCAAGTTCGTCGTCGTCGGCGACCTCGGCCAGACGGGGTGGACGGCGTCGACGCTGCGGCACGTCGCCGCCGACGTCTACGACATGCTGCTCCTCCCCGGCGACCTGTCGTACGCCGACTTCTACCAGCCGCGGTGGGACACGTTCGGCCGCCTCGTCGAGCCGCTGGCGAGCGCGCGGCCATGGATGGTGACGGAGGGCAACCACGAGGTGGAGAGGATCCCGGTCATCCACCCGCGGCCGTTCACGGCGTACGACGCGCGGTGGCGCATGCCGCACGACGCCGGCGCGTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGTCGCCGGCGGCGCCGTGCACGTCGTCATGCTGGGGTCCTACGCCGGCTACGCCGCCGGCTCGGCGCAGCACCGGTGGCTGCGGCGCGACCTCGCGGGGGTCGACCGCGCCAAGACGGCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAGGGCGCACCGCGGCGAGGGCGACGCCATGCGCGCCGCCATGGAGGAGCTCCTCTACGGCGCCCGCGTCGACGCGGTGTTCGCCGGCCACGTCCACGCGTACGAGAGGTTCGCGCGGGTGTACGGCGGCGGCGAGGACGCGTGCGGGCCGGTGCACGTGACCGTCGGCGACGGCGGCAACCGGGAGGGGCTCGCCACGAGGTACGTCGACCCGCAGCCGGCGGCGTCGGCGTTCAGGGAGGCGAGCTTCGGGCACGGCAGGCTGGAGGTGGTGAACGCCACGCACGCGCTGTGGACGTGGCGGCGGAACGACGACGACGAGGCGGTGGTCGCCGACGAGGTGTGGATCACCAGCCTCGCATCCAACCCGGCTTGCAACAAGAAGTATTCCATCAGCTTGTATTGATGTGTGAGAAACTAGGATGACGATAGGTAGTGTGATTCTCTTGATGATTATACTACTTGATAAATCTCTCTCACATAAATTATATAGTATATGGTTAATTTGTAAGTTATGATATGAAACCATATTTTTATTAGCAAAACTAATTTATAAAAA]

[+] EMBL AK107301             [CAATATCGTCGACTGATCGATTTGGGCGAGAGACGACTTTTGTGAGCTTGTGACCATATGGCAATGGCGAGCGTAGCAGCGTTGCGTCTCGTCGTCCTCCTCGCCGCCGCCGTGCCGCTGCTGCCGCCGCCGGCGGCATCGCTGGCCGTGACGTCGACGTACGTGCGGCCGACGGCGAGGGCGACGCTGTCCGTGCTCCACGACGGCTATGGCCGAACGCCGCAGCAGGTGCATATATCAGCTGTAGGCTCTGACAAGATGAGGGTGACGTGGATCACCGACGACGACGCGCCGGCCACCGTGGAGTACGGCACGGTCTCCGGCGAGTACCCATTCTCGGCGGCCGGAAACACCACCACCTACTCCTACGTCCTCTACCACTCCGGCAACATCCACGACGTCGTCATCGGCCCACTCAAACCCAGCACCACCTACTTCTACCGCTGCAGCAACGACACGTCGCGCGAGCTCTCCTTCCGTACGCCGCCGGCGAGCCTCCCGTTCAAGTTCGTCGTCGTCGGCGACCTCGGCCAGACGGGGTGGACGGCGTCGACGCTGCGGCACGTCGCCGCCGACGTCTACGACATGCTGCTCCTCCCCGGCGACCTGTCGTACGCCGACTTCTACCAGCCGCGGTGGGACACGTTCGGCCGCCTCGTCGAGCCGCTGGCGAGCGCGCGGCCATGGATGGTGACGGAGGGCAACCACGAGGTGGAGAGGATCCCGGTCATCCACCCGCGGCCGTTCACGGCGTACGACGCGCGGTGGCGCATGCCGCACGACGCCGGCGCGTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGTCGCCGGCGGCGCCGTGCACGTCGTCATGCTGGGGTCCTACGCCGGCTACGCCGCCGGCTCGGCGCAGCACCGGTGGCTGCGGCGCGACCTCGCGGGGGTCGACCGCGCCAAGACGGCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAGGGCGCACCGCGGCGAGGGCGACGCCATGCGCGCCGCCATGGAGGAGCTCCTCTACGGCGCCCGCGTCGACGCGGTGTTCGCCGGCCACGTCCACGCGTACGAGAGGTTCGCGCGGGTGTACGGCGGCGGCGAGGACGCGTGCGGGCCGGTGCACGTGACCGTCGGCGACGGCGGCAACCGGGAGGGGCTCGCCACGAGGTACGTCGACCCGCAGCCGGCGGCGTCGGCGTTCAGGGAGGCGAGCTTCGGGCACGGCAGGCTGGAGGTGGTGAACGCCACGCACGCGCTGTGGACGTGGCGGCGGAACGACGACGACGAGGCGGTGGTCGCCGACGAGGTGTGGATCACCAGCCTCGCATCCAACCCGGCTTGCAACAAGAAGTATTCCATCAGCTTGTATTGATGTGTGAGAAACTAGGATGACGATAGGTAGTGTGATTCTCTTGATGATTATACTACTTGATAAATCTCTCTCACATAAATTATATAGTATATG                                                            ]
[+] EMBL BI794969             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCGAC CGGTGTTC CC GCCACGTCCACGCGTACGAGAGGTTCGCGCGGGTGTAC GCGGCGGCGAGGACGCGTGCGGGCCGGTGCACGTGACCGTCGGCGA GGCGGCAACCGGGAGGGTCTCGCCACGAGGTACGTCGACCCGCAGCCGGCGGCGTCGGCGTTCAGGGAGGCGAGCTTCGGGCACGGCAGGCTGGAGGTGGTGAACGCCACGCACGCGCTGTGGACGTGGCGGCGGAACGACGACGACGA GCGGTGGTC CCGACGAGGTGTGGATCACCAGCCTCGCATCCAACCCGGCTTGCAACAAGAAGGATTCCATCAGCTTGTATTGATGTGTGAGAAACTAGGATGACGATAGGTAGTGTGATTCTCTTGATGATTATACTACTTGATAAATCTCTCTCACATAAATTATATAGTATATGGTTAATTTGTAAGTTATGATATGAAACCATATTTTTATTAGCAAAACTAATTTATAAAAA]


>consensus_11437#2 CAATATCGTCGACTGATCGATTTGGGCGAGAGACGACTTTTGTGAGCTTGTGACCATATG GCAATGGCGAGCGTAGCAGCGTTGCGTCTCGTCGTCCTCCTCGCCGCCGCCGTGCCGCTG CTGCCGCCGCCGGCGGCATCGCTGGCCGTGACGTCGACGTACGTGCGGCCGACGGCGAGG GCGACGCTGTCCGTGCTCCACGACGGCTATGGCCGAACGCCGCAGCAGGTGCATATATCA GCTGTAGGCTCTGACAAGATGAGGGTGACGTGGATCACCGACGACGACGCGCCGGCCACC GTGGAGTACGGCACGGTCTCCGGCGAGTACCCATTCTCGGCGGCCGGAAACACCACCACC TACTCCTACGTCCTCTACCACTCCGGCAACATCCACGACGTCGTCATCGGCCCACTCAAA CCCAGCACCACCTACTTCTACCGCTGCAGCAACGACACGTCGCGCGAGCTCTCCTTCCGT ACGCCGCCGGCGAGCCTCCCGTTCAAGTTCGTCGTCGTCGGCGACCTCGGCCAGACGGGG TGGACGGCGTCGACGCTGCGGCACGTCGCCGCCGACGTCTACGACATGCTGCTCCTCCCC GGCGACCTGTCGTACGCCGACTTCTACCAGCCGCGGTGGGACACGTTCGGCCGCCTCGTC GAGCCGCTGGCGAGCGCGCGGCCATGGATGGTGACGGAGGGCAACCACGAGGTGGAGAGG ATCCCGGTCATCCACCCGCGGCCGTTCACGGCGTACGACGCGCGGTGGCGCATGCCGCAC GACGCCGGCGCGTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGTCGCCGGCGGC GCCGTGCACGTCGTCATGCTGGGGTCCTACGCCGGCTACGCCGCCGGCTCGGCGCAGCAC CGGTGGCTGCGGCGCGACCTCGCGGGGGTCGACCGCGCCAAGACGGCGTTCGTGGTGGCG CTGGTGCACGCGCCGTGGTACAACAGCAACAGGGCGCACCGCGGCGAGGGCGACGCCATG CGCGCCGCCATGGAGGAGCTCCTCTACGGCGCCCGCGTCGACGCGGTGTTCGCCGGCCAC GTCCACGCGTACGAGAGGTTCGCGCGGGTGTACGGCGGCGGCGAGGACGCGTGCGGGCCG GTGCACGTGACCGTCGGCGACGGCGGCAACCGGGAGGGGCTCGCCACGAGGTACGTCGAC CCGCAGCCGGCGGCGTCGGCGTTCAGGGAGGCGAGCTTCGGGCACGGCAGGCTGGAGGTG GTGAACGCCACGCACGCGCTGTGGACGTGGCGGCGGAACGACGACGACGAGGCGGTGGTC GCCGACGAGGTGTGGATCACCAGCCTCGCATCCAACCCGGCTTGCAACAAGAAGTATTCC ATCAGCTTGTATTGATGTGTGAGAAACTAGGATGACGATAGGTAGTGTGATTCTCTTGAT GATTATACTACTTGATAAATCTCTCTCACATAAATTATATAGTATATGGTTAATTTGTAA GTTATGATATGAAACCATATTTTTATTAGCAAAACTAATTTATAAAAA



consensusID : consensus_11437#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence
                              [CACGGCGCTGAGGATCCTGAACGAGACGAGCCGCCGTCTGGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAAGCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGGCGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATATCTCACACTGTTAAGAATGAATGGAAGAAAAGGAAACTTCACCACGTTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAACACTTGTCCACTTTGTCCCTTGTAAATCAAATCGTGATATCGTGTGTTTCAGTTAGTGTACAGTGTTTTTCTTGTGTTAGACACCGTGGTGAAATAGAATTGTATGCTCCTTTTCAGTGTACAAGCCAACACTGATGGGCTCATCTTTTCGCTTATACTATTTATACTTATCATCTAAAAAAA]

[+] EMBL BI797150             [CACGGCGCTGAGGATCCTGAACGAGACGAGCCGCCGTCTGGACGTGGCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAAGCTTGGCCGCCGGCGAGCCAGCTGCTACAGTAGCCTCCGCCGGCGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATATCTCACACTGTTAAGAATGAATGGAAGAAAAGGAAACTTCACCACGTTTAGCATTGTCTTTTATTTTTTTTCTTTTTCATCAGCCATAAACACTTGTCCACTTTGTCCCTTGTAAATCAAATCGTGATATCGTGTGTTTCAGTTAGTGTACAGTGTTTTTCTTGTGTTAGACACCGTGGTGAAATAGAATTGTATGCTCCTTTTCAGTGTACAAGCCAACACTGATGGGCTCATCTTTTCGCTTATACTATTTATACTTATCATCTAAAAAAA]


>consensus_11437#3 CACGGCGCTGAGGATCCTGAACGAGACGAGCCGCCGTCTGGACGTGGCACCGCAACGACG ACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTGCACAAGCTTGGCCGCCGGCGAGCCA GCTGCTACAGTAGCCTCCGCCGGCGCGGCCATCCGGCCGACGAGCTGTAGGCTATATATA TCTCACACTGTTAAGAATGAATGGAAGAAAAGGAAACTTCACCACGTTTAGCATTGTCTT TTATTTTTTTTCTTTTTCATCAGCCATAAACACTTGTCCACTTTGTCCCTTGTAAATCAA ATCGTGATATCGTGTGTTTCAGTTAGTGTACAGTGTTTTTCTTGTGTTAGACACCGTGGT GAAATAGAATTGTATGCTCCTTTTCAGTGTACAAGCCAACACTGATGGGCTCATCTTTTC GCTTATACTATTTATACTTATCATCTAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11437#0      TCCTCNCCCAGGTCGTCTCCNCCNCCGGGCTCANCCCAGNCTGGCCACCGATGATGATNG 60
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CGACGGCCGCGATGGCGGCGAGCTCGTGCGATCGAGGCGACACGCGTAAGAAGCTGCAGA 120
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      TAACTGTAGTTTTCCTCGTCCGCACGCTACNGCTCGCGTGTATAATAGCCCGCGGGGTGC 180
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      TCGCGCTGATACGGGTTGCGTTCCGCGTCGCCGTGGTTGCTCCGGCGAGAAGCCTCGTCG 240
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CCGTCGCGGGCGCCGCCTTCTCCGCCGTGAACNCGCGGTGCGCGTGGTGCCTGGAACAGG 300
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CGGCGCTCGGGCGGAGCTGCACGGGGACGGTCCTCGGCGACGCGGTGGTGGGCGCCATGG 360
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CGAGCTCGTGGAGGCTGCTGCTGCAGGGGATCACGTCGCTGGTGTTCCTGTGCGCGCGTG 420
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      GCGCCGACGAGTACGTCCGGCCGCCACCGAGCCCGCTGGTGCTCACGGCGCACGGCAAGC 480
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CGGCGTCGCATCCTCAGCAGGTGCACATTTCGATGGTGGGGGAGAAGAACATGAGGATTT 540
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CATGGGTGACCGACGACCTGAACGCGCCGTCCGTGGTGGAGTACGGGACGTCGCCGGGGA 600
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      AGTACACGGCGTCGGCGACCGGCGACCACACCACGTACCGCTACTTCCTCTACAAGTCCG 660
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      GCGCGATCCACCACGCCACCATCGGCCCGCTCGAGGCGAGCACGACGTACCACTACCGGT 720
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      GCGGCAAGGCCGGCGACGAGTTCACCCTCAGGACGCCTCCGGCGAGGCTGCCTGTGGAGT 780
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      TCGTCGTGGTCGGCGACCTCGGGCAGACGAAGTGGACGGCGTCGACGCTGTCCCACATCG 840
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      GCGGCGGCGGCGGCGACTACGACGTGCTGCTGCTCCCCGGCGACCTGTCGTACGCCGACA 900
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CGCAGCAGCCGCTGTGGGACACGTTCGGGCGGCTGGTGCAGCCGCTGGCGAGCGCGCGGC 960
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ------------------------------------------------------------
consensus_11437#2      ------------------------------------------------------------
                                                                                   

consensus_11437#0      CGTGGATGGTGACGGAGGGGAACCACGAGATCGAGGCGCTGCCGGTGGTGGGGATCGCGC 1020
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      -----------------------------TTCTATAGGGGTTGCTTCCACTTGCCTAGAT 31
consensus_11437#2      --------CAATATCGTCGACTGATCGATTTGGGCGAGAGACGACTTTTGTGAGCTTGTG 52
                                                                                   

consensus_11437#0      CGTTCGCGGCGTACAACGCGCGGTGGCGGATGCCGCGGGAGGAGAGCGGCTCGCCGTCGA 1080
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ACGACGCGCCAAGGAAGATGACGCGTCGCGCTGATG-ATCTCCTGGTTGCCGGAACGCTC 90
consensus_11437#2      ACCATATGGCAATGGCGA----GCGTAGCAGCGTTGCGTCTCGTCGTCCTCCTCGCCGCC 108
                                                                                   

consensus_11437#0      ACCTCTACTACTCGTTCGACGCGGCGGGCGGCGCGGCGCACGTGGTGATGCTGGGATCCT 1140
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      GTCAT--CTCCATCGTCTTCTTCAGGTGCGCCGCTG-CCGTGGCAGCCACCGAGTATGTC 147
consensus_11437#2      GCCGTGCCGCTGCTGCCGCCGCCGGCGGCATCGCTGGCCGTGACGTCGAC---GTACGTG 165
                                                                                   

consensus_11437#0      ACGCGGAGTTCGAGGAAGGGTCGCCGCAGCGGGCGTGGCTGGAGCGGGACCTCGCCGGCG 1200
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      CGGCCTCCCCCCGGGCGGGTCATCTTCACTGAGCACACCAAGCCCGCCTCACATCCTCAA 207
consensus_11437#2      CGGCCGACGGCGAGGGCGACGCTGTCCGTGCTCCACGACGGCTATGGCCGAACGCCGCAG 225
                                                                                   

consensus_11437#0      TCGACCGGCGGCGGACGCCGTGGCTGCTGGCGCTGGTGCACGCGCCGTGGTACAACACGA 1260
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      CAGGTTCATGTGTCGCTCGTCGGGGCGAACCATATGAGAGTGTCATGGATCACGGAGGAC 267
consensus_11437#2      CAGGTGCATATATCAGCTGTAGGCTCTGACAAGATGAGGGTGACGTGGATCACCGACGAC 285
                                                                                   

consensus_11437#0      ACGAGGCGCACCAGGGCGAGGGCGAGCGGATGCGCCGCGCCATGGAGAGCCTCCTCTACG 1320
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      AAGCACGTCAAGTCCGTGGTGGAGTATGGCAAGGTCTCCGGGAACTACACGGCGTCGGCC 327
consensus_11437#2      GA-CGCGCCGG--CCACCGTGGAGTACGGCACGGTCTCCGGCGAGTACCCATTCTCGGCG 342
                                                                                   

consensus_11437#0      AGGCCCGCGTCGACGTCGTCTTCGCCGGCCACGTCCACGCCTACGAGCGCTTCACGAGGA 1380
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ACCGGCGAGCACACATCCTACCGCTACTTCCTCTACTCCTCCGGCAAGATCCACCACGTC 387
consensus_11437#2      GCCGGAAACACCACCACCTACTCCTACGTCCTCTACCACTCCGGCAACATCCACGACGTC 402
                                                                                   

consensus_11437#0      TCTACGACAACGAGGCTGACAGCCGGGGCCCAATGTACATCACCATTGGCGACGGGGGCA 1440
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      AAGATCGGACCGCTGGATCCCGGCACGGTGTACTACTACCGGTGCGGCA-TGGC-CGGCG 445
consensus_11437#2      GTCATCGGCCCACTCAAACCCAGCACCACCTACTTCTACCGCTGCAGCAACGACACGTCG 462
                                                                                   

consensus_11437#0      ACAGGGAAGGCCTTGCTCTCAAGTTCATCAAGGGGCACAAGTCGGCGCACCTGTCGGAGT 1500
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      -ACGAGTTCGGCCTCAGGACCCCGCCGGCCGCGCTCCCAGTCGAGCTCGCCGTCGCGGGG 504
consensus_11437#2      CGCGAGCTCTCCTTCCGTACGCCGCCGGCGAGCCTCCCGTTCAAGTTCGTCGTCGTCGGC 522
                                                                                   

consensus_11437#0      TCAGGGAGGCGAGCTTCGGGCACGGGCGGCTGAGGGTCCTGAACGAGACGAGC-GCCGTC 1559
consensus_11437#3      --------------------CACGGC--GCTGAGGATCCTGAACGAGACGAGCCGCCGTC 38
consensus_11437#1      GATCTTGGGCAGACCGAGTGGACGGC--GTCGACGCTGTCCCACGTCGGCAGG-TCCGAC 561
consensus_11437#2      GACCTCGGCCAGACGGGGTGGACGGC--GTCGACGCTGCGGCACGTCGCCGCC-GACGTC 579
                                            ****   *  ** * *     ***           ** *

consensus_11437#0      TG-GACGTG--GCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTG 1616
consensus_11437#3      TG-GACGTG--GCACCGCAACGACGACCAGTTCGCCACCGTCCGCGACGAGGTCTGGCTG 95
consensus_11437#1      TACGACGTGCTGCTGGTTCCCGGCGACCTGTCCTACGCCGACGCCCAGCAGCCGCTGTGG 621
consensus_11437#2      TACGACATGCTGCTCCTCCCCGGCGACCTGTCGTACGCCGACTTCTACCAGCCGCGGTGG 639
                       *  *** **  **       ** ***** **    * *** *  * *  **     *  *

consensus_11437#0      CACA-GCTTGGCCGCC-------------GGCGAGCCAGCTGCTACAG-TAGCCTCCGCC 1661
consensus_11437#3      CACAAGCTTGGCCGCC-------------GGCGAGCCAGCTGCTACAG-TAGCCTCCGCC 141
consensus_11437#1      GACTCGTTCGGCCGGTTCGTGCAGAAGTACGCGAGCCGGCGGCCATGGATGGTCACCGAA 681
consensus_11437#2      GACACGTTCGGCCGCCTCGTCGAGCCGCTGGCGAGCGCGCGGCCATGGATGGTGACGGAG 699
                        **  * * *****                ******  ** ** *  * * *   * *  

consensus_11437#0      GCCGGCGGCGGCGGCGGCC-----ATCCGGCCGACGAGCTGTA---GGCTATATATATCT 1713
consensus_11437#3      GGCG----------CGGCC-----ATCCGGCCGACGAGCTGTA---GGCTATATATATCT 183
consensus_11437#1      GGGAACCACGAGGTGGAGGCCGCGATGGCGCTCCCGGGCTGGCCGCGGCCGTTCACGGCG 741
consensus_11437#2      GGCAACCACGAGGTGGAGA---GGATCCCGGTCAT---CCACCCGCGGCCGTTCACGGCG 753
                       *              *        **   *        *       ***  *  *   * 

consensus_11437#0      CACACTGTTAAG-AATGAATGGAAGAAAAGGAAACTTCACCAC-ATTTAGCATTGTCTTT 1771
consensus_11437#3      CACACTGTTAAG-AATGAATGGAAGAAAAGGAAACTTCACCAC-GTTTAGCATTGTCTTT 241
consensus_11437#1      TACGCCGCGCGGTGGCGGATGCCGTACGAGGAGAGCG----GC--TCGGGGACCAGCCTC 795
consensus_11437#2      TACGACGCGCGGTGGCGCATGCCGCACGACGCCGGCGCGTCGCCGTCGGGGTCCAACCTC 813
                        **   *    *    * ***    *  * *           *  *   *      * * 

consensus_11437#0      TATT-TTTTTTCTTTTTCATCAGC-----CATAAACA-TTGTCCA-TTTG--TCC-TTGT 1820
consensus_11437#3      TATT-TTTTTTCTTTTTCATCAGC-----CATAAACACTTGTCCACTTTG--TCCCTTGT 293
consensus_11437#1      TACTACTCCTTCGACGCCGCCGGCGGCGCCGTCCACG-TCGTCATGCTCGGCTCGTACGC 854
consensus_11437#2      TACTACTCCTTCGACGTCGCCGGCGGCGCCGTGCACG-TCGTCATGCTGGGGTCCTACGC 872
                       ** *  *  ***     *  * **     * *  **  * ***    * *  **    * 

consensus_11437#0      AAATCAA-TCGTGATATCG-TGTGTTTCAGCTAG-TGTACAGTGTTTTTCTTGTGTTAGA 1877
consensus_11437#3      AAATCAAATCGTGATATCG-TGTGTTTCAGTTAG-TGTACAGTGTTTTTCTTGTGTTAGA 351
consensus_11437#1      CGACTTCAACTCGAGCTCGGAGCAGTACAGGTGGCTGGCCCGCGACCTCGCCGCCGTCGA 914
consensus_11437#2      CGGCTACGCCGCCGGCTCGGCGCAGCACCGGTGGCTGCGGCGCGACCTCGCGGGGGTCGA 932
                                *      ***  *     * * * * **    * *   *    *   * **

consensus_11437#0      CAC-GTGGTGAAATAGAATT------------TCAGTGTACA--AGGCCAACACTGATG- 1921
consensus_11437#3      CACCGTGGTGAAATAGAATTGTATGCTCCTTTTCAGTGTACA--AG-CCAACACTGATG- 407
consensus_11437#1      CCGCGGCGCGACGCCCTGGGTCGTGGTGCTGCTGCACGCGCCCTGGTACAACACGAACGC 974
consensus_11437#2      CCGCGCCAAGACGGCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAG 992
                       *   *    **                     *    *  *    *  *****   *   

consensus_11437#0      GGCTCATCTTTTCGCTTATACTATTTATACTTATCATCCAAAATTTGAAGTTTCAGCTTT 1981
consensus_11437#3      GGCTCATCTTTTCGCTTATACTATTTATACTTATCATCTAAAAAAA-------------- 453
consensus_11437#1      GGCGCACGAGGGGGAGGGCGAGGCC-ATGAGGAAGGCCATGGAGCGCCTCCTCTACGAGG 1033
consensus_11437#2      GGCGCACCGCGGCGAGGGCGACGCC-ATGCGCGCCGCCATGGAGGAGCTCCTCTACGGCG 1051
                       *** **       *            **         *    *                 

consensus_11437#0      CAAAAAAAA--------------------------------------------------- 1990
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      CCCGCGTCGACATCGTCTTCGCCGGCCATGTCCACGCCTACGAACGCTTCACAAGGGTAT 1093
consensus_11437#2      CCCGCGTCGACGCGGTGTTCGCCGGCCACGTCCACGCGTACGAGAGGTTCGCGCGGGTGT 1111
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      ATAACAACGAGGCGAACCCGTGTGGACCGGTGCACATCACCATAGGCGACGGCGGCAACA 1153
consensus_11437#2      ACGGCGGCGGCGAGGACGCGTGCGGGCCGGTGCACGTGACCGTCGGCGACGGCGGCAACC 1171
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      GGGAAGGCCTCGCATTTGACTTTCGGAAGAACCACAAGCTGGCGCCGCTCTCGTTGATGA 1213
consensus_11437#2      GGGAGGGGCTCGC-CACGAGGTACGTC-GACCCGCA-GCCGGCGGCG---TCGGCGTTCA 1225
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      GGGAGGCGAGCTTCGGGCACGGGCGGCTGAGCGTGGTGAACGCGACCGCCGCGCGCTGGA 1273
consensus_11437#2      GGGAGGCGAGCTTCGGGCACGGCAGGCTGGAGGTGGTGAACGCCACGCACGCGCTGTGGA 1285
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      CGTGGCACCGCAACGACGACGCCGACTCCACCGTGCGCGACGAGATCTGGCTGGAGAGCC 1333
consensus_11437#2      CGTGGCGGCGGAACGACGACGACGAGGCGGTGGTCGCCGACGAGGTGTGGATCACCAGCC 1345
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      TGGCTGCCAACGGCGCGTGCCAGCAGAGTAGCAGCGCCGCCGCCGCCGCGGACTCTCAGA 1393
consensus_11437#2      TCGCATCCAACCCGGCTTGCAACAAGAAGTATTCCATCAGC-TTGTATTGATGTGTGAGA 1404
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      AC----GACGAGTTGTAGCATTGCACATTGCTTGATATTAATTCAACAAATTAATTTGAT 1449
consensus_11437#2      AACTAGGATGACGATAGGTAGTGTGATTCTCTTGATGATTATACTACTTGATAAATCTCT 1464
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      AGCGCTCTTAATTTGCTTGTCACGTGCCGGTGAACCTGGGTGCTTACTTTACGGGCAAAC 1509
consensus_11437#2      --CTCACATAAATTATATAGTATAT---GGTTAATTTGTAAG-TTATGATATG---AAAC 1515
                                                                                   

consensus_11437#0      ------------------------------------------------------------
consensus_11437#3      ------------------------------------------------------------
consensus_11437#1      AATGCATTTGTACCATAGTGTGGTTAGTGGCCAGTAGTGCTTAGGCCGGCGGCATTTGCC 1569
consensus_11437#2      CATATTTTTAT----TAGCAAAACTAATTTATAAAAA----------------------- 1548
                                                                                   

consensus_11437#0      -------------------------------------------------------
consensus_11437#3      -------------------------------------------------------
consensus_11437#1      GTGCCTCTGATAGCTAGAACGAACAACTTCTGTGCCTGTTTGTGGGTGTAATCAT 1624
consensus_11437#2      -------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)