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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11439#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3037 fasta sequence
[ACTCGAATATACCCATCGCCGCCATCACTGATCCGCCGCTCCCCATCTTCTCCGCCTCCGCGATCTCGCCGCCGCCGCCGCCGCCCCCAAGCTCCCCACTGCTCCCCGCCGACGCCTCCCCCGACCAGGAGCTCCCCGCCGACGAGCGAGCGAGCGAGCCGAGGGGAAGGATGGGGTACATCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGGTGGTGGCCAAGTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTCTTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTCCATCTTGCCCATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGCGCACTAGCTCATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCTGTGCTTTTGAAGCATTAGCCCTTGGAAGCACCTTGATGTGTGGAAGGTTTACTTTCTGTTTCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTCTTTACAAATACACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCCACTCTTTTACCTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATACCCCTTTTAAGTTGGGTACCCCTTCCATTTATTCCAGATATCCCCTTATACATTATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTCAGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGTGGTAAGTTTTTAATTTGTTTTGCCCCTAGCATGGATTTTAATCGATGGTTTAACACAGGATTCTACCTCCTTCCTCAGTGCGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGTTGTCATGCTTATCAGTTCTAACCACATGGTTCCTGCTAGGCCTTGCCTATCCTTAAAAACAGCCACCTGCTATGAGTTCAAATTTCAAAGCAACCAGGGGCACTCCATGCTCCAGTTCTCTTCACTATTTCAGCATTCTTCATGCTTCAGTTAGTGAGAGCCTGAGAGGGCACCAAGGACAAAAATCGTTTTTGAAACCAGCCTTGTTTCAATACCTGAGGGGTGTCAAGTATCCAGTTTTAGAGTTTAGAGTCAAAATGCGGCCTGCTAAGAGTTTAGAGTCAAAATGTGGTCTGCTAAGAGCAAGTAAAAACTTCCTACATTTTGGAAATGGATCTTTGTTA-GTAGGTTACTA-GAAAAACAATAGGCTGCTTCAATCAGGTTTTGATCAACCCATCTAACCTATAAAAATACTATAAACTATATGAAATAATGACCAAATTATACAGAACTGTGCAGCAGAATTGCAAAGGGTCCATATGCAGATAAATCAGGCCAATGGTATTTGGGCATTTGTATCACTGTTGTCTTGTGGCAGCAATTAGTTACGCAACTGAACATGCCTGCCATCAGCTGACCTTGCCTTTTGATCTGGAAAGGGTGGTAAACTGAATACTGTTTAGCTTGTTTTGTGGACGATATATCATATTGGATATTCTTGTGTTCATTAAATGTGGATCAGCATTTCATCAACTTGCAGTTCCTTAATTACTTTCTTATAGTTTTCATTATAGTTTTCATCTTTGCAAAACTTTCTTATGATCTACTTTGATCTATCTGCACAGCAGTTATAAGTCTAGGAATTTTTATCTAACCATCACAAATCACTAATTAGGTTATATCTAACCATCCAAGTTATATTGCGACAATTAAAAACTTGATAGTCCCATTATCCGCCTGGATTTTTATGAAAAGCATTTATGGCTAACATGCACAACATATTGGTACTGATATACTGTTGCTGAAGAAGCACCTAATGCCACTTGGTTCACCTAATGTGCCACTGCGCTTTGTTCTTTACTGAATAGTGATGGAGCATTTTTCTGTAGAGTGAGATTTGCAAACATAGTGCATAATACTAATCTACCATCATCCTTGTTTTTCCTTCCTGGAATTAGTGCTCATATTTTGAGTTGCCATGCATGGACAGGGAAGGATGATACTTGCTCATTTATGTGATGAACCCAAAGGTCTCAAAACTGGAATGTGCATGTCTCTGGTGTTTCTTCCTTTCGCTATTGCAAATGCTCTCACAGCAAAGATCAATGCTGGGATTCCTTTAGTTGATGAGCTGCTGGTTCTTTTCCTGTATTGCGCATACACAGTGGGCCTTTACCTGCATCTTGCCGTTTCTGTTGTGCATGAAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACTAGAAAAGAGGCTTGAATGTGTTCTGAGTTCTTACATAGCAATAGGAGGCATTCTGTCACCTTGTTTCGTTCCAGATATTTTTGCCTTTGGCCATACCAAATCTCATCGGTGTGCATCCTGGGGTCC-TGCCCCTT-GAACACCACAACA-AGCAGTCGTTTGATCTGTTTGAT-GCAGATGGAT-ACTTTTGGAGT-GTAATGCAGAAATATCTTTAGTCCTATATATGTACATGTTGTACACCCAGCT-TTTGACGTACTTTT-GGGTTCCATAGTTAAGGAATCGATA-GGTTTTGTACTATTTAGATGA-CAGGAGGATGAACTATTATTGCA-AGTGTGGAGTCGTG-CCTTGAGCAAACAAAAGCGTTCCATGATTGTAGCTGGTTAATTTGCATGTCTACCATAATGCGTCACCTGTTGTTTCGGCGCCAAAAAAAAAA]
[+] EMBL AK100462 [ACTCGAATATACCCATCGCCGCCATCACTGATCCGCCGCTCCCCATCTTCTCCGCCTCCGCGATCTCGCCGCCGCCGCCGCCGCCCCCAAGCTCCCCACTGCTCCCCGCCGACGCCTCCCCCGACCAGGAGCTCCCCGCCGACGAGCGAGCGAGCGAGCCGAGGGGAAGGATGGGGTACATCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGGTGGTGGCCAAGTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTCTTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTCCATCTTGCCCATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGCGCACTAGCTCATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCTGTGCTTTTGAAGCATTAGCCCTTGGAAGCACCTTGATGTGTGGAAGGTTTACTTTCTGTTTCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTCTTTACAAATACACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCCACTCTTTTACCTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATACCCCTTTTAAGTTGGGTACCCCTTCCATTTATTCCAGATATCCCCTTATACATTATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTCAGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGTGGTAAGTTTTTAATTTGTTTTGCCCCTAGCATGGATTTTAATCGATGGTTTAACACAGGATTCTACCTCCTTCCTCAGTGCGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGTTGTCATGCTTATCAGTTCTAACCACATGGTTCCTGCTAGGCCTTGCCTATCCTTAAAAACAGCCACCTGCTATGAGTTCAAATTTCAAAGCAACCAGGGGCACTCCATGCTCCAGTTCTCTTCACTATTTCAGCATTCTTCATGCTTCAGTTAGTGAGAGCCTGAGAGGGCACCAAGGACAAAAATCGTTTTTGAAACCAGCCTTGTTTCAATACCTGAGGGGTGTCAAGTATCCAGTTTTAGAGTTTAGAGTCAAAATGCGGCCTGCTAAGAGTTTAGAGTCAAAATGTGGTCTGCTAAGAGCAAGTAAAAACTTCCTACATTTTGGAAATGGATCTTTGTTA GTAGGTTACTA GAAAAACAATAGGCTGCTTCAATCAGGTTTTGATCAACCCATCTAACCTATAAAAATACTATAAACTATATGAAATAATGACCAAATTATACAGAACTGTGCAGCAGAATTGCAAAGGGTCCATATGCAGATAAATCAGGCCAATGGTATTTGGGCATTTGTATCACTGTTGTCTTGTGGCAGCAATTAGTTACGCAACTGAACATGCCTGCCATCAGCTGACCTTGCCTTTTGATCTGGAAAGGGTGGTAAACTGAATACTGTTTAGCTTGTTTTGTGGACGATATATCATATTGGATATTCTTGTGTTCATTAAATGTGGATCAGCATTTCATTAACTTGCAGTTCCTTAATTACTTTCTTATAGTTTTCATTATAGTTTTCATCTTTGCAAAACTTTCTTATGATCTACTTTGATCTATCTGCACAGCAGTTATAAGTCTAGGAATTTTTATCTAACCATCACAAATCACTAATTAGGTTATATCTAACCATCCAAGTTATATTGCGACAATTAAAAACTTGATAGTCCCATTATCCGCCTGGATTTTTATGAAAAGCATTTATGGCTAACATGCACAACATATTGGTACTGATATACTGTTGCTGAAGAAGCACCTAATGCCACTTGGTTCACCTAATGTGCCACTGCGCTTTGTTCTTTACTGAATAGTGATGGAGCATTTTTCTGTAGAGTGAGATTTGCAAACATAGTGCATAATACTAATCTACCATCATCCTTGTTTTTCCTTCCTGGAATTAGTGCTCATATTTTGAGTTGCCATGCATGGACAGGGAAGGATGATACTTGCTCATTTATGTGATGAACCCAAAGGTCTCAAAACTGGAATGTGCATGTCTCTGGTGTTTCTTCCTTTCGCTATTGCAAATGCTCTCACAGCAAAGATCAATGCTGGGATTCCTTTAGTTGATGAGCTGCTGGTTCTTTTCCTGTATTGCGCATACACAGTGGGCCTTTACCTGCATCTTGCCGTTTCTGTTGTGCATGAAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACTAGAAAAGAGGCTTGAATGTGTTCTGAGTTCTTACATAGCAATAGGAGGCATTCTGTCACCTTGTTTCGTTCCAGATATTTTTGCCTTTGGCCATACCAAATCTCATCGGTGTGCATCCTGGGGTCC TGCCCCTT GAACACCACAACA AGCAGTCGTTTGATCTGTTTGAT GCAGATGGAT ACTTTTGGAGT GTAATGCAGAAATATCTTTAGTCCTATATATGTACATGTTGTACACCCAGCT TTTGACGTACTTTT GGGTTCCATAGTTAAGGAATCGATA GGTTTTGTACTATTTAGATGA CAGGAGGATGAACTATTATTGCA AGTGTGGAGTCGTG CCTTGAGCAAACAAAAGCGTTCCATGATTGTAGCTGGTTAATTTGCATGTCTACCATAATGCGTCACCTGTTG ]
[+] EMBL AK067531 [ TGGCATTGGCAATGCTCCTTCCTTTCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGTGGTAAGTTTTTAATTTGTTTTGCCCCTAGCATGGATTTTAATCGATGGTTTAACACAGGATTCTACCTCCTTCCTCAGTGCGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGTTGTCATGCTTATCAGTTCTAACCACATGGTTCCTGCTAGGCCTTGCCTATCCTTAAAAACAGCCACCTGCTATGAGTTCAAATTTCAAAGCAACCAGGGGCACTCCATGCTCCAGTTCTCTTCACTATTTCAGCATTCTTCATGCTTCAGTTAGTGAGAGCCTGAGAGGGCACCAAGGACAAAAATCGTTTTTGAAACCAGCCTTGTTTCAATACCTGAGGGGTGTCAAGTATCCAGTTTTAGAGTTTAGAGTCAAAATGCGGCCTGCTAAGAGTTTAGAGTCAAAATGTGGTCTGCTAAGAGCAAGTAAAAACTTCCTACATTTTGGAAATGGATCTTTGTTA GTAGGTTACTA GAAAAACAGTAGGCTGCTTCGATCAGGTTTTGATCAACCCATCTAACCTATAAAAATACTATAAACTATATGAAATAATGACCAAATTATACAGAACTGTGCAGCAGAATTGCAAAGGGTCCATATGCAGATAAATCAGGCCAATGGTATTTGGGCATTTGTATCACTGTTGTCTTGTGGCAGCAATTAGTTACGCAACTGAACATGCCTGCCATCAGCTGACCTTGCCTTTTGATCTGGAAAGGGTGGTAAACTGAATACTGTTTAGCTTGTTTTGTGGACGATATATCATATTGGATATTCTTGTGTTCATTAAATGTGGATCAGCATTTCATCAACTTGCAGTTCCTTAATTACTTTCTTATAGTTTTCATTATAGTTTTCATCTTTGCAAAACTTTCTTATGATCTACTTTGATCTATCTGCACAGCAGTTATAAGTCTAGGAATTTTTATCTAACCATCACAAATCACTAATTAGGTTATATCTAACCATCCAAGTTATATTGCGACAATTAAAAACTTGATAGTCCCATTATCCGCCTGGATTTTTATGAAAAGCATTTATGGCTAACATGCACAACATATTGGTACTGATATACTGTTGCTGAAGAAGCACCTAATGCCACTTGGTTCACCTAATGTGCCACTGCGCTTTGTTCTTTACTGAATAGTGATGGAGCATTTTTCTGTAGAGTGAGATTTGCAAACATAGTGCATAATACTAATCTACCATCATCCTTGTTTTTCCTTCCTGGAATTAGAGCTCATATTTTGAGTTGCCATGCATGGACAGGGAAGGATGATACTTGCTCATTTATGTGATGAACCCAAAGGTCTCAAAACTGGAATGTGCATGTCTCTGGTGTTTCTTCCTTTCGCTATTGCAAATGCTCTCACAGCAAAGATCAATGCTGGGATTCCTTTAGTTGATGAGCTGCTGGTTCTTTTCCTGTATTGCGCATACACAGTGGGCCTTTACCTGCATCTTGCCGTTTCTGTTGTGCATGAAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACTAGAAAAGAGGCTTGAATGTGTTCTGAGTTCTTACATAGCAATAGGAGGCATTCTGTCACCTTGTTTCGTTCCAGATATTTTTGCCTTTGGCCATACCAAATCTCATCGGTGTGCATCCTGGGGTCC TGCCCCTT GAACACCACAACA AGCAGTCGTTTGATCTGTTTGAT GCAGATGGAT ACTTTTGGAGT GTAATGCAGAAATATCTTTAGTCCTATATATGTACATGTTGTACACCCAGCT TTTGACGTACTTTT GGGTTCCATAGTTAAGGAATCGATA GGTTTTGTACTATTTAGATGA CGGGAGGATGAACTATTATTGCA AGTGTGGAGTCG ]
[+] EMBL CF306113 [ acgAGGATCCAGTTTTAGACTTTAGAGTCAAAATGCGGCCTGCTAAGAGTTTAGAGTCAAAATGTGGTCTGCTAAGAGCAAGTAAAAACTTCCTACATTTTGGAAATGGATCTTTGTTACGTAGGTTACTATGAAAAACAATAGGTTTTTTCATTCAGGTTTTGATCAACCCATCTAACCTATAAAAATACTTGATACTATATGAAATAATGACCAAATTATACAGAACTGTGCAGCAGAATTGCAAAGGGTCCATATGCAGATAAATCAGGCCAATGGTATTTGGGCATTTGTATCACTGTTGTCTTGTGGCAGCAATTAGTTACGCAACTGAACATGCCTGCCATCAGCTGACCTTGCCTTTTGATCTGGAAAGGGTGGTAAACTGAATACTGTTTAGCTTGTTTTGTGGACGATATATCATATTGGATATTCTTGTGTTCATTAAATGTGGATCAGCATTTCATCAACTTGCAGTTCCTTAATTACTTTCTTATAGTT ]
[+] EMBL CB000959 [ GCCTGCTAAGAGTTTAGAGTCAAAATGTGGTCTGCTAAGAGCAAGTAAAAACTTCCTACATTTTGGAAATGGATCTTTGTTA GTAGGTTACTA GAAAAACAATAGGCTGCTTCAATCAGGTTTTGATCAACCCATCTAACCTATAAAAATACTATAAACTATATGAAATAATGACCAAATTATACAGAACTGTGCAGCAGAATTGCAAAGGGTCCATATGCAGATAAATCAGGCCAATGGTATTTGGGCATTTGTATCACTGTTGTCTTGTGGCAGCAATTAGTTACGCAACTGAACATGCCTGCCATCAGCTGACCTTGCCTTTTGATCTGGAAAGGGTGGTAAACTGAATACTGTTTAGCTTGTTTTGTGGACGATATATCATATTGGATATTCTTGTGTTCATTAAATGTGGATCAGCATTTCAT ]
[+] EMBL BQ906644 [ TATTTTTGCCTTTGGCCATACCNAATCTCATCGGTGTGCATCCTGGGGTCCATGCCCCTTGGAACACCACTACATAGCAGTCGTTTGATCTGTTTGATNGCAGATGGATGACTTTTGGAGTGGTAATGCAGAAATATCTTTAGTCCTATATATGTACATGTTGTACACCCAGCTCTTTGACGTACTTTTCGGGTTCCATAGTTAAGGAATCGATACGGTTTTGTACTATTTAGATGACCAGGAGGATGAACTATTATTGCACAGTGTGGAGTCGTGCCCTTGANCCAAAAAAAaaa ]
[+] EMBL CF331034 [ CTATTTAGATGA CAGGAGGATGAACTATTATTGCA AGTGTGGAGTCGTG CCTTGAGCAAACAAAAGCGTTCCATGATTGTAGCTGGTTAATTTGCATGTCTACCATAATGCGTCACCTGTTGTTTCGGCGCCAAAA ]
[-] EMBL CF331033 [ TATTTAGATGA CAGGAGGATGAACTATTATTGCA AGTGTGGAGTCGTG CCTTGAGCAAACAAAAGCGTTCCATGATTGTAGCTGGTTAATTTGCATGTCTACCATAATGCGTCACCTGTTGTTTCGGCGCCAAAAAAAAAA]
consensusID : consensus_11439#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 424 fasta sequence
[ATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTCAGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGNNNNCGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGTTGTCATGCTTATCANTTCTAACCACATGGTTCCTGCTAGGCCTTGCCTATCCTTAAAAACAGCCACCTGCTATGAGTTNNNNTTTCAAAGCAACCAGGGGCACTCCNNGCTCCAGTTCTCTTCACTATTNNNNNN]
[+] EMBL CF196727 [ATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTCAGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGNNNNCGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGTTGTCATGCTTATCANTTCTAACCACATGGTTCCTGCTAGGCCTTGCCTATCCTTAAAAACAGCCACCTGCTATGAGTTNNNNTTTCAAAGCAACCAGGGGCACTCCNNGCTCCAGTTCTCTTCACTATTNNNNNN]
consensusID : consensus_11439#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 220 fasta sequence
[TTTCTTTTAGAGTGAGATTTGCAAACATAGTGCATAATAGTAATCCACCATCATCCTTTTTTCCCTTCCTGGAATTAGTGCTCATATTTTAATTTGCCATGCATGGACAGGGAAGGATGATACTGGCCCATTTATGTAATGAACCCAAAGGTCTCAAAACTGGAATTTGCATGTTTCTGGTGTCTCCCTGCCGCAATTGCAAATGTCCTCACAGCAAAGA]
[+] EMBL AA750470 [TTTCTTTTAGAGTGAGATTTGCAAACATAGTGCATAATAGTAATCCACCATCATCCTTTTTTCCCTTCCTGGAATTAGTGCTCATATTTTAATTTGCCATGCATGGACAGGGAAGGATGATACTGGCCCATTTATGTAATGAACCCAAAGGTCTCAAAACTGGAATTTGCATGTTTCTGGTGTCTCCCTGCCGCAATTGCAAATGTCCTCACAGCAAAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11439#0 ACTCGAATATACCCATCGCCGCCATCACTGATCCGCCGCTCCCCATCTTCTCCGCCTCCG 60
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CGATCTCGCCGCCGCCGCCGCCGCCCCCAAGCTCCCCACTGCTCCCCGCCGACGCCTCCC 120
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CCGACCAGGAGCTCCCCGCCGACGAGCGAGCGAGCGAGCCGAGGGGAAGGATGGGGTACA 180
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGG 240
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TGGTGGCCAAGTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCT 300
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTC 360
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTCCATCTTGCCC 420
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGC 480
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GCACTAGCTCATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCT 540
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GTGCTTTTGAAGCATTAGCCCTTGGAAGCACCTTGATGTGTGGAAGGTTTACTTTCTGTT 600
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTCTTTACAAATA 660
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCC 720
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ACTCTTTTACCTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATAC 780
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CCCTTTTAAGTTGGGTACCCCTTCCATTTATTCCAGATATCCCCTTATACATTATTGTGA 840
consensus_11439#1 -----------------------------------------------------ATTGTGA 7
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTCAGCAATGTCC 900
consensus_11439#1 TGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTCAGCAATGTCC 67
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 AAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTT 960
consensus_11439#1 AAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTT 127
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGA-TATTATG 1019
consensus_11439#1 TCATTGCATTGTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGA-TATTATG 186
consensus_11439#2 -----------------------------------------TTTCTTTTAGAGTGAGATT 19
* ** ** *** * **
consensus_11439#0 AGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGTGGTA 1079
consensus_11439#1 AGGAATCAGCCACATCTGCTTGTGATCGGAACTGGTTTTGCTTTTGGATATTTGGNNNN- 245
consensus_11439#2 TGCAAACA-TAGTGCATAATAGTAATCCACCATCATCCTTTTTTCCCTTCCTGGAATTAG 78
* ** ** * * ** *** * * * *** * * *
consensus_11439#0 AGTTTTTAATTTGTTTTGCCCCTAGCATGGATTTTAATCGATGGTTTAACACAGGATTCT 1139
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 TG---------------------------------------------------------- 80
consensus_11439#0 ACCTCCTTCCTCAGTGCGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGT 1199
consensus_11439#1 ----------------CGCAATCACCAATTCACTGGAGCAGCCACTGTCATACCCATTGT 289
consensus_11439#2 ----------------CTCATATTTTAATTTGCCAT-GCATGGACAGGGAAGGATGATAC 123
* ** **** * *** ** * * *
consensus_11439#0 TGTCATGCTTATCAGTTCTAACCACATGGTTCCTG-CTAGGCCTTGCCTATCCTTAAAAA 1258
consensus_11439#1 TGTCATGCTTATCANTTCTAACCACATGGTTCCTG-CTAGGCCTTGCCTATCCTTAAAAA 348
consensus_11439#2 TGGCCCATTTATGTAATGAACCCAAAGGTCTCAAAACTGGAATTTGCATGTTTCTGGTGT 183
** * **** * * *** * * ** ** * **** * * *
consensus_11439#0 CAGCCACCTGCTATGAGTTCAAATTTCAAAGCAACCAGGGGCACTCCATGCTCCAGTTCT 1318
consensus_11439#1 CAGCCACCTGCTATGAGTTNNNNTTTCAAAGCAACCAGGGGCACTCCNNGCTCCAGTTCT 408
consensus_11439#2 CTCCCTGCCGCAATTGCAAATGTCCTCACAGCAAAGA----------------------- 220
* ** * ** ** *** ***** *
consensus_11439#0 CTTCACTATTTCAGCATTCTTCATGCTTCAGTTAGTGAGAGCCTGAGAGGGCACCAAGGA 1378
consensus_11439#1 CTTCACTATTNNNNNN-------------------------------------------- 424
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CAAAAATCGTTTTTGAAACCAGCCTTGTTTCAATACCTGAGGGGTGTCAAGTATCCAGTT 1438
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TTAGAGTTTAGAGTCAAAATGCGGCCTGCTAAGAGTTTAGAGTCAAAATGTGGTCTGCTA 1498
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 AGAGCAAGTAAAAACTTCCTACATTTTGGAAATGGATCTTTGTTAGTAGGTTACTAGAAA 1558
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 AACAATAGGCTGCTTCAATCAGGTTTTGATCAACCCATCTAACCTATAAAAATACTATAA 1618
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ACTATATGAAATAATGACCAAATTATACAGAACTGTGCAGCAGAATTGCAAAGGGTCCAT 1678
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ATGCAGATAAATCAGGCCAATGGTATTTGGGCATTTGTATCACTGTTGTCTTGTGGCAGC 1738
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 AATTAGTTACGCAACTGAACATGCCTGCCATCAGCTGACCTTGCCTTTTGATCTGGAAAG 1798
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GGTGGTAAACTGAATACTGTTTAGCTTGTTTTGTGGACGATATATCATATTGGATATTCT 1858
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TGTGTTCATTAAATGTGGATCAGCATTTCATCAACTTGCAGTTCCTTAATTACTTTCTTA 1918
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TAGTTTTCATTATAGTTTTCATCTTTGCAAAACTTTCTTATGATCTACTTTGATCTATCT 1978
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GCACAGCAGTTATAAGTCTAGGAATTTTTATCTAACCATCACAAATCACTAATTAGGTTA 2038
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TATCTAACCATCCAAGTTATATTGCGACAATTAAAAACTTGATAGTCCCATTATCCGCCT 2098
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GGATTTTTATGAAAAGCATTTATGGCTAACATGCACAACATATTGGTACTGATATACTGT 2158
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TGCTGAAGAAGCACCTAATGCCACTTGGTTCACCTAATGTGCCACTGCGCTTTGTTCTTT 2218
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ACTGAATAGTGATGGAGCATTTTTCTGTAGAGTGAGATTTGCAAACATAGTGCATAATAC 2278
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TAATCTACCATCATCCTTGTTTTTCCTTCCTGGAATTAGTGCTCATATTTTGAGTTGCCA 2338
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TGCATGGACAGGGAAGGATGATACTTGCTCATTTATGTGATGAACCCAAAGGTCTCAAAA 2398
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CTGGAATGTGCATGTCTCTGGTGTTTCTTCCTTTCGCTATTGCAAATGCTCTCACAGCAA 2458
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 AGATCAATGCTGGGATTCCTTTAGTTGATGAGCTGCTGGTTCTTTTCCTGTATTGCGCAT 2518
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ACACAGTGGGCCTTTACCTGCATCTTGCCGTTTCTGTTGTGCATGAAATCAAGGATGCTC 2578
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 TTGGAATCTATTGCTTCAGGATAACTAGAAAAGAGGCTTGAATGTGTTCTGAGTTCTTAC 2638
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ATAGCAATAGGAGGCATTCTGTCACCTTGTTTCGTTCCAGATATTTTTGCCTTTGGCCAT 2698
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 ACCAAATCTCATCGGTGTGCATCCTGGGGTCCTGCCCCTTGAACACCACAACAAGCAGTC 2758
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GTTTGATCTGTTTGATGCAGATGGATACTTTTGGAGTGTAATGCAGAAATATCTTTAGTC 2818
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CTATATATGTACATGTTGTACACCCAGCTTTTGACGTACTTTTGGGTTCCATAGTTAAGG 2878
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 AATCGATAGGTTTTGTACTATTTAGATGACAGGAGGATGAACTATTATTGCAAGTGTGGA 2938
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 GTCGTGCCTTGAGCAAACAAAAGCGTTCCATGATTGTAGCTGGTTAATTTGCATGTCTAC 2998
consensus_11439#1 ------------------------------------------------------------
consensus_11439#2 ------------------------------------------------------------
consensus_11439#0 CATAATGCGTCACCTGTTGTTTCGGCGCCAAAAAAAAAA 3037
consensus_11439#1 ---------------------------------------
consensus_11439#2 ---------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||