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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11445#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3195 fasta sequence
[AGACGAAACCAACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCGGCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCATCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTCCGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACTCAGCTGAAAATGGTATGTAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCTTCTCTGGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCGTCTTACGCTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCT-GTCCTCTTCAGT-AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT-TGGTAT-GGAGATTC-GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC-TTCTGCAAAAATAGGACT-GAGGACA-GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA-TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACGG]
[+] EMBL AK120818 [AGACGAAACCAACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCGGCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCATCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTCCGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACTCAGCTGAAAATGGTATGTAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCTTCTCTGGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCGTCTTACGCTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCT GTCCTCTTCAGT AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGA ]
[+] EMBL CB669820 [ AACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCGGCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCATCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTCCGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCATGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCTACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCA ]
[+] EMBL CB636668 [ GCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTACTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGGCCGCGTACCGGCGCAAGTCCTCGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTACTGCATGCGCGCCGACCTGCTCAAGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAAGGGAGGCTGCAGGTGC ]
[+] EMBL CB634963 [ AGCTGGACAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCCTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCATCTTACGTTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAA TGTGCTATTGAGCTGGTACTAGATGAAT ]
[+] EMBL AK120009 [ GTATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCT GTCCTCTTCAGT AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACG ]
[+] EMBL AU057376 [ TATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCANGGGTCTTCACTAGAAAATATAAATCTGGCCCTCTTCAGTAAGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGNTATNGGGTATGGGNGATTCGGTCCcaa ]
[-] EMBL CB634964 [ TAGAAAATATAAATCT GTCCTCTTCAGT AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATATACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACGG]
[-] EMBL CB669821 [ CAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACGG]
[+] EMBL BI813211 [ ACGAGA GTCTTTCT C AAAATAGGACTGGAGGACACGTGCATGCAGAATTTATCACCAATCCA GTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTATTTTTTCTC AACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||