These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2130 fasta sequence [CTTGCAATAGCAGAGCAGGGTATATAAAATCCGGCGGCGCCGTCGGGGCCACCTTCACCGTCGCGCTCCTCGCCGCCGCGCTGCTCCTCGCCCTCTCCTTGTACGCCTCCTCCCTGCCCCGCGCGCCTACCACGCCCTCCTCCTCCTCTAACCTCGTCGGCCTCACCCTCGTCCGCCGCGCCAAGGAGAAGGGCGCGGTGTGCTTGGATGGGAGCGCGCCGGGGTACCATCTGCAGAGAGGCTCCGGCACTGGATCTCAAAACTGGCTCCTTCACTTGGAGGGCGGAGGCTGGTGCCGGAATCTGAGGTCATGTGCTTCACGTCAAAAATCGGTGTTGGGTTCATCGCAATACATGGAATGCCAGATTGAGTTTGCTGGGATCTTGAGTAATGACAAATTTCAAAACCCAGATTTTTACAATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTCAAGAACGAATTGCAGAATGGCACAAAATTCTTTTTCCGGGGCCAGCGTATCTGGGAGGCAGTAATGAGCGAACTTCTACTAAAGGGACTCAGGCATGCCAAACAGCTTTCAGGCTTTTCTAACAGGATGCTCTGCTGGTGGGCTAGCCACTTTCATTCACTGCGATAATTTCCGTACACTGCTACCAAAGGATTCT-AGGGTTAAGTGTCTTGCGGATGGTGGATTTTTCCTCGATGTAGAGGACATTTCT-GGGCAAAGGACCATGCGAGCATTCTACAACGATGTTGTCCGTCTTCAGGATCTGCGTGGAAGGTTTCCCCATTGTGGTCCAAACATGGATCTGGGCCAGTGCTTCTTCCCAAGTGAAGTTGTAAAGGACATCATCACCCCAGTATTTGTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATGTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGACTGGATATTAGCAAGTGTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATACTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGGTAATGCTTTCATCCTCTAAAAAGAAAACAGAAAGAAAAAAAATGTCTACAGTTCAAGGAACATTATATATTATGTCAAATTGACAAATTGTAGGTTAGCCTGTGTTGAGGGCTAGCCTTTGCAAATTTATGGTGACCGTCAGCTGACTTAACATCTAGTATTTACAGTGATGATGTTCTTGAGATTATTTATGTGTTTTAAACTATTCGATGTACAAGAAAGAAAGGTGTCCTGTTAGTCACAAGATAAGAGTGACTCTATAAATAGTTTGCCGAGGATTCAGCCTATAAAAAAACAGGAAGAAGCTCCTCAGCAGTCAGCTGTGCTACTGCTGTACATGAGTACATCGTCTAAGCCCCATAAATATATTATTTAATGTAACATCACAGGACATCCCTTTGTAGGTCATCTGTTGTAGATTGCATGTCTCCACTACGGCATTACCTCATGTTAGTTTAATTTCCTGCACATGATACTTACTGAGCTAACCATGAAGGTGTCAGTATTCCTCCAATCTTCTTGGTTTACTTCTTCAATATTTTGCTCGTGGTCTAACGTTGAATCTGCTGAATAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATTTATGTAGGATTATAAGTAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTTGTTTTCTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAAAAAAAAAAAAA] [+] EMBL AK068437 [CTTGCAATAGCAGAGCAGGGTATATAAAATCCGGCGGCGCCGTCGGGGCCACCTTCACCGTCGCGCTCCTCGCCGCCGCGCTGCTCCTCGCCCTCTCCTTGTACGCCTCCTCCCTGCCCCGCGCGCCTACCACGCCCTCCTCCTCCTCTAACCTCGTCGGCCTCACCCTCGTCCGCCGCGCCAAGGAGAAGGGCGCGGTGTGCTTGGATGGGAGCGCGCCGGGGTACCATCTGCAGAGAGGCTCCGGCACTGGATCTCAAAACTGGCTCCTTCACTTGGAGGGCGGAGGCTGGTGCCGGAATCTGAGGTCATGTGCTTCACGTCAAAAATCGGTGTTGGGTTCATCGCAATACATGGAATGCCAGATTGAGTTTGCTGGGATCTTGAGTAATGACAAATTTCAAAACCCAGATTTTTACAATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTCAAGAACGAATTGCAGAATGGCACAAAATTCTTTTTCCGGGGCCAGCGTATCTGGGAGGCAGTAATGAGCGAACTTCTACTAAAGGGACTCAGGCATGCCAAACAGCTTTCAGGCTTTTCTAACAGGATGCTCTGCTGGTGGGCTAGCCACTTTCATTCACTGCGATAATTTCCGTACACTGCTACCAAAGGATTCT AGGGTTAAGTGTCTTGCGGATGGTGGATTTTTCCTCGATGTAGAGGACATTTCT GGGCAAAGGACCATGCGAGCATTCTACAACGATGTTGTCCGTCTTCAGGATCTGCGTGGAAGGTTTCCCCATTGTGGTCCAAACATGGATCTGGGCCAGTGCTTCTTCCCAAGTGAAGTTGTAAAGGACATCATCACCCCAGTATTTGTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATGTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGACTGGATATTAGCAAGTGTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATACTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGGTAATGCTTTCATCCTCTAAAAAGAAAACAGAAAGAAAAAAAATGTCTACAGTTCAAGGAACATTATATATTATGTCAAATTGACAAATTGTAGGTTAGCCTGTGTTGAGGGCTAGCCTTTGCAAATTTATGGTGACCGTCAGCTGACTTAACATCTAGTATTTACAGTGATGATGTTCTTGAGATTATTTATGTGTTTTAAACTATTCGATGTACAAGAAAGAAAGGTGTCCTGTTAGTCACAAGATAAGAGTGACTCTATAAATAGTTTGCCGAGGATTCAGCCTATAAAAAAACAGGAAGAAGCTCCTCAGCAGTCAGCTGTGCTACTGCTGTACATGAGTACATCGTCTAAGCCCCATAAATATATTATTTAATGTAACATCACAGGACATCCCTTTGTAGGTCATCTGTTGTAGATTGCATGTCTCCACTACGGCATTACCTCATGTTAGTTTAATTTCCTGCACATGATACTTACTGAGCTAACCATGAAGGTGTCAGTATTCCTCCAATCTTCTTGGTTTACTTCTTCAATATTTTGCTCGTGGTCTAACGTTGAATCTGCTGAATAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATTTATGTAGGATTATAAGTAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTTGTTTTCTATAAAATAAACAAAAAGT ] [+] EMBL AU070514 [ GTCGGGGCCACCTTCACCGTCGCGCTCCTCGCCGCCGCGCTGCTCCTCGCCCTCTCCTTGTACGCCTCCTCCCTGCCCCGCGCGCCTACCACGCCCTCCTCCTCCTCTAACCTCGTCGGCCTCACCCTCGTCCGCCGCGCCAAGGAGAAGGGCGCGGTGTGCTTGGATGGGAGCGCGCCGGGGTACCATCTGCAGAGAGGCTCCGGCACTGGATCTCAAAACTGGCTCCTTCACTTGGAGGGCGGAGGCTGGTGCCGGAATCTGAGGTCATGTGCTTCACGTCAAAAATCGGTGTTGGGTTCATCGCAATACATGGAATGCCAGATTGAGTTTGCTGGGATCTTGAGTAATGACAAATTTCAAAACCCAGATTTTTACAATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTCAAGAACGAATTGCAGAATGGCACAAAATTCTTTTTCCGGGGCCAGCGTATCTGGGAGGCAGTAATGAGCGAACTTCTACTAAAGGGACTCAGGCATGCCAAA CAGGCTTTTCTAACAGGATGCTCTGCTGGTGGGCTAGCCACTTTCATTCACTGCGATAATTTCCGTACACTGCTACCAAAGGATTCTAAGGGTTAAGTGTCTTNCGGATAGTGGATTTTTCCTCGATGTANAGGACA TTCTGGGGCAAAGGACCATGn ] [+] EMBL AU101916 [ GAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATTTATGTAGGATTATAAGTAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTTGTTTTCTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAAAAAAAAAAAAA] consensusID : consensus_11454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 754 fasta sequence [CCCCATTGTGGTCCAAACATGGATCTGGGCCAGTGCTTCTTCCCAAGTGAAGTTGTAAAGGACATCATCACCCCAGTATTTGTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATGTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGACTGGATATTAGCAAGTGTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATACTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATTTATGTAGGATTATAAGTAG-TTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTAG-GTTCTATAAAATAAACAAAAAGTGTA-TTTCTTGTAAAAAAGGGA] [-] EMBL CB678908 [CCCCATTGTGGTCCAAACATGGATCTGGGCCAGTGCTTCTTCCCAAGTGAAGTTGTAAAGGACATCATCACCCCAGTATTTGTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATGTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGACTGGATATTAGCAAGTGTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATACTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATTTATGTAGGATTATAAGTAG TTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTAG GTTCTATAAAATAAACAAAAAGTGTA TTTCTTGTAAAAAAGGGA] [+] EMBL CA766627 [ AAAGGACATCATCACCCCAGTATTTGTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATGTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGACTGGATATTAGCAAGTGTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATACTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATTTATGTAGGATTATAAGTAGNTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTTGNTTTCTATNAAATAAACAAAAAGTGTATTTTCTT ] consensusID : consensus_11454#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 742 fasta sequence [GTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATTTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGATTGGATATTAGCAAGTGTGATTCGAACCAACTTTAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATATTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTTTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTTTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTTTAAACATGTTTTTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTTGGGTGTTTGACACCCAAAATCATACATTTGAGATAATTAGATTGGCGGAATTTTTTTTCGAGGCAATTTATTTAGGATTATAACGCCACCAGAGGCGCAGGTGGTGGCTCGCCGGCGCGGAGGCGGAGGAAGTGGGCGACGCCATGGGGATGGGGGATCCCTCGATTCGATCTGAATTCGAATTGAATTTTAGTGAATTTAATCGAATTGATCGCCTCCTCCTCTCGATTCGCCAGATTTTAT] [-] EMBL CB678907 [GTTCTTAATCCAGCGTATGATGCTTGGCAGGTGCAACATTTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGCAGATTGGATATTAGCAAGTGTGATTCGAACCAACTTTAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATATTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTTTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTTTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTTTAAACATGTTTTTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTTGGGTGTTTGACACCCAAAATCATACATTTGAGATAATTAGATTGGCGGAATTTTTTTTCGAGGCAATTTATTTAGGATTATAACGCCACCAGAGGCGCAGGTGGTGGCTCGCCGGCGCGGAGGCGGAGGAAGTGGGCG ] [-] EMBL CB639371 [ AGGTGGTGGCTCGCCGGCGCGGAGGCGGAGGACGTCGGCGACGCCATGGGGATGGGGGATCCCTCGATTCGATCTGAATTCGAATTGAATTTTAGTGAATTTAATCGAATTGATCGCCTCCTCCTCTCGATTCGCCAGATTTTAT] consensusID : consensus_11454#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence [TCGAGGCCGAGGGGATGTATAAGGTCGTTTAGCTCACCAAGAGGCCCACCCAGGGGGGTAGCATCTGCCCTCCACATTCATGCCTAGAACGCAGACTGTGTATTAGCCAGTGTGATTCGAACCACCTTGAAATTCTCCAAGGTCTTAGGAAAAAGCTACCTGCTACCATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTCCACGCAATTTATGTAGGATTATAAGTAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTTGTTTTCTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAAAAAAA] [-] EMBL CA762226 [TCGAGGCCGAGGGGATGTATAAGGTCGTTTAGCTCACCAAGAGGCCCACCCAGGGGGGTAGCATCTGCCCTCCACATTCATGCCTAGAACGCAGACTGTGTATTAGCCAGTGTGATTCGAACCACCTTGAAATTCTCCAAGGTCTTAGGAAAAAGCTACCTGCTACCATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGACTCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTCAACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAGGAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACAACTTGGTTTTTGCCAAGCCTTTCAAGGCATGATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAACAGGAAATTTTATATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTGACACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTCCACGCAATTTATGTAGGATTATAAGTAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAACTTGTTTTCTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAAAAAAA] consensusID : consensus_11454#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence [GGGATCGCAATACATGGAACGCCAGATTGAGTTTGCTGGGATCTTGAGTAATGACAAATTTCAAAACCCAGATTTTTACAATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTCAAGAACGAATTGCAGAATGGCACAAAATTCTTTTTCCGGGGCCAGCGTATCTGGGAGGCAGTAATGAGCGAACTTCTACTAAAGGGACTCAGGCATGCCAAACAGCTTTCAGGCTTTTCTAACAGGATGCTCTGCTGGTGGGCTAGCCACTTTCATTCACTGCGATAATTTCCGTACACTGCTACCAAAGGATTCTAGGGTTAAGTGTCTTGCGGATGGTGGATTTTTCCTCGATGTGTATGTTTCCAAATCACCTTTGCGCATGCTTTGTGATTTTCAATATTTTTTTCGTGCATGCATGAAGTACTTGCTAGATATTCTGTGTCAATCTGAGTATTTGCAGCTGTAGGCACAAATAGTAACTAGAAGACTTCAAACATCCAAGCTATTTGAGTGTATGAACATTGAANATCTTGTACTGACGTATATATAAAATGAAATCGTCCAACGAGATG] [+] EMBL CA766402 [GGGATCGCAATACATGGAACGCCAGATTGAGTTTGCTGGGATCTTGAGTAATGACAAATTTCAAAACCCAGATTTTTACAATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTCAAGAACGAATTGCAGAATGGCACAAAATTCTTTTTCCGGGGCCAGCGTATCTGGGAGGCAGTAATGAGCGAACTTCTACTAAAGGGACTCAGGCATGCCAAACAGCTTTCAGGCTTTTCTAACAGGATGCTCTGCTGGTGGGCTAGCCACTTTCATTCACTGCGATAATTTCCGTACACTGCTACCAAAGGATTCTAGGGTTAAGTGTCTTGCGGATGGTGGATTTTTCCTCGATGTGTATGTTTCCAAATCACCTTTGCGCATGCTTTGTGATTTTCAATATTTTTTTCGTGCATGCATGAAGTACTTGCTAGATATTCTGTGTCAATCTGAGTATTTGCAGCTGTAGGCACAAATAGTAACTAGAAGACTTCAAACATCCAAGCTATTTGAGTGTATGAACATTGAANATCTTGTACTGACGTATATATAAAATGAAATCGTCCAACGAGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 CTTGCAATAGCAGAGCAGGGTATATAAAATCCGGCGGCGCCGTCGGGGCCACCTTCACCG 60 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 TCGCGCTCCTCGCCGCCGCGCTGCTCCTCGCCCTCTCCTTGTACGCCTCCTCCCTGCCCC 120 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 GCGCGCCTACCACGCCCTCCTCCTCCTCTAACCTCGTCGGCCTCACCCTCGTCCGCCGCG 180 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 CCAAGGAGAAGGGCGCGGTGTGCTTGGATGGGAGCGCGCCGGGGTACCATCTGCAGAGAG 240 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 GCTCCGGCACTGGATCTCAAAACTGGCTCCTTCACTTGGAGGGCGGAGGCTGGTGCCGGA 300 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 ATCTGAGGTCATGTGCTTCACGTCAAAAATCGGTGTTGGGTTCATCGCAATACATGGAAT 360 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 GCCAGATTGAGTTTGCTGGGATCTTGAGTAATGACAAATTTCAAAACCCAGATTTTTACA 420 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 ATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTCAAGA 480 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 ACGAATTGCAGAATGGCACAAAATTCTTTTTCCGGGGCCAGCGTATCTGGGAGGCAGTAA 540 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 TGAGCGAACTTCTACTAAAGGGACTCAGGCATGCCAAACAGCTTTCAGGCTTTTCTAACA 600 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 GGATGCTCTGCTGGTGGGCTAGCCACTTTCATTCACTGCGATAATTTCCGTACACTGCTA 660 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 CCAAAGGATTCTAGGGTTAAGTGTCTTGCGGATGGTGGATTTTTCCTCGATGTAGAGGAC 720 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 ATTTCTGGGCAAAGGACCATGCGAGCATTCTACAACGATGTTGTCCGTCTTCAGGATCTG 780 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 CGTGGAAGGTTTCCCCATTGTGGTCCAAACATGGATCTGGGCCAGTGCTTCTTCCCAAGT 840 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 GAAGTTGTAAAGGACATCATCACCCCAGTATTTGTTCTTAATCCAGCGTATGATGCTTGG 900 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 CAGGTGCAACATGTGTTGAGTCCAGTAGCATCTGACCCTCAACATTCATGGCTAGAATGC 960 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 AGACTGGATATTAGCAAGTGTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAA 1020 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 AAGTTACATGATACTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGAC 1080 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 TCATGCTTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTT 1140 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 AGAGTCAACAACAAGGTAATGCTTTCATCCTCTAAAAAGAAAACAGAAAGAAAAAAAATG 1200 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 TCTACAGTTCAAGGAACATTATATATTATGTCAAATTGACAAATTGTAGGTTAGCCTGTG 1260 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------------ consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 TTGAGGGCTAGCCTTTGCAAATTTATGGTGACCGTCAGCTGACTTAACATCTAGTATTTA 1320 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 -------------------------------------CCCCATTGTGGTCCAAACATGGA 23 consensus_11454#3 ------------------------------------------------------------ consensus_11454#2 ------------------------------------------------------------ consensus_11454#0 CAGTGATGATGTTCTTGAGATTATTTATGTGTTTTAAACTATTCGATGTACAAGAAAGAA 1380 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 TCTGGGCCAGTGCTTCTTCCCAAGTGAAGTTGTAAAGGACATCATCACCCCAGTATTTGT 83 consensus_11454#3 --------------------------------------------------------TCGA 4 consensus_11454#2 ----------------------------------------------------------GT 2 consensus_11454#0 AGGTGTCCTGTTAGTCACAAGATAAGAGTGACTCTATAAATAGTTTGCCGAGGATTCAGC 1440 consensus_11454#4 ----------------------------------------GGGATCGCAATACATGGAAC 20 consensus_11454#1 TCTTAATCCAGC-GTATGATGCTTGGCAGGTGCAACATGTGTTGA----GTCCA-----G 133 consensus_11454#3 GGCCGAGGGGAT-GTATAAGG-TCGTTTAGCTCACCAAGAGGCCC----ACCCAGGGGGG 58 consensus_11454#2 TCTTAATCCAGC-GTATGATGCTTGGCAGGTGCAACATTTGTTGA----GTCCA-----G 52 consensus_11454#0 CTATAAAAAAACAGGAAGAAGCTCCTCAGCAGTCAGCTGTGCTACTGCTGTACATGAGTA 1500 consensus_11454#4 GCCAGATTGAGT-TTGCTGGGATCTTGAGTAATGACAAATTTCAAA---ACCCAGATTTT 76 * * * ** consensus_11454#1 TAGCATC----TGACCCTCA-ACATT-CATGGCTAGAATGCAG----ACTGGATATTAGC 183 consensus_11454#3 TAGCATC----TG-CCCTCC-ACATT-CATGCCTAGAACGCAG----ACTGTGTATTAGC 107 consensus_11454#2 TAGCATC----TGACCCTCA-ACATT-CATGGCTAGAATGCAG----ATTGGATATTAGC 102 consensus_11454#0 CATCGTC----TAAGCCCCATAAATA-TATTATTT-AATGTAACATCACAGGACATCCCT 1554 consensus_11454#4 TACAATTGGAATAAAGTTAAGATAAGGTATTGTGATGGGGCATCATTTTCTGGAAACGTC 136 * * * * * ** * * * consensus_11454#1 AAGT--GTGATTCGAACCAACTTGAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATA 241 consensus_11454#3 CAGT--GTGATTCGAACCACCTTGAAATTCTCCAAGGTCTTAGGAAAAAGCTACCTGCTA 165 consensus_11454#2 AAGT--GTGATTCGAACCAACTTTAAATTCTCCAAGGTTTTAGGAAAAAGTTACATGATA 160 consensus_11454#0 TTGTAGGTCATCTGTTGTAGATTGCATGTCTCCA-----CTACGGCATTACCTCATGTTA 1609 consensus_11454#4 AAGAACGAATTGCAGAATGGCACAAAATTCTTT----TTCCGGGGCCAGCGTATCTGGGA 192 * * * * *** * ** * consensus_11454#1 -----CTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGAC--TCATGC 294 consensus_11454#3 -----CCATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGAC--TCATGC 218 consensus_11454#2 -----TTATAAGTGAACTTAAGCACAAAAAGGACTGGGGCTTTTTTATCGAC--TCATGC 213 consensus_11454#0 -----GTTTAATT--TCCTGCACATGATACTTACTGAGCTAACCATGAAGGTG-TCAGTA 1661 consensus_11454#4 GGCAGTAATGAGCGAACTTC--TACTAAAGGGACTCAGGCATGCCAAACAGCTTTCAGGC 250 * * * * * * * *** * *** consensus_11454#1 TTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTC 354 consensus_11454#3 TTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTCTCCATCTTCTCTTAGAGTC 278 consensus_11454#2 TTTATACACTGTCAGTCGTTGAACTCCTTGACTTGGCATTTTCCATCTTCTCTTAGAGTC 273 consensus_11454#0 TTCCTCCAATCTTCTTGGTTTACTTCTTCAATATTTTGCTCGTGGTCTAACGTTGAATCT 1721 consensus_11454#4 TTTTCTAACAG---GATGCTCTGCTGGTGGGCTAGCCACTTTC-ATTCACTGCGATAATT 306 ** * * * * * * * * consensus_11454#1 AACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAG 414 consensus_11454#3 AACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAG 338 consensus_11454#2 AACAACAAGACCATTGCAGAGGCGGTTGGAGATTGGTTTTTTGACAGAAGAGAGGTGAAG 333 consensus_11454#0 GCTGAATAGACCATTGCAGAGGCGGTTGGAGATTGGTTCTTTGACAGAAGAGAGGTGAAG 1781 consensus_11454#4 TCCG--TACACTGCTACCAAAGGATTCTAGGGTTAAGTGTCTTGCGGATGGTGGATTTT- 363 * ** * * * * * * ** * * * * ** * * * consensus_11454#1 GAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACA-ACTTGGTTTTTGCCAAG-- 471 consensus_11454#3 GAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACA-ACTTGGTTTTTGCCAAG-- 395 consensus_11454#2 GAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACA-ACTTGGTTTTTGCCAAG-- 390 consensus_11454#0 GAAATTGATTGTGAATATCCCTGCAACCCGACTTGCCACA-ACTTGGTTTTTGCCAAG-- 1838 consensus_11454#4 ----TCCTCGATGTGTATGTTTCCAAATCACCTTTGCGCATGCTTTGTGATTTTCAATAT 419 * ** *** * *** * *** * ** *** ** ** *** consensus_11454#1 CCTTTCAAGGCATG-ATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAA 530 consensus_11454#3 CCTTTCAAGGCATG-ATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAA 454 consensus_11454#2 CCTTTCAAGGCATG-ATGAAGTTTTAAACATGTTTTTCTTTTTGCCATGATATTGTAAAA 449 consensus_11454#0 CCTTTCAAGGCATG-ATGAAGTTCTAAACACGTTTCTCTTTTTGCCATGATATTGTAAAA 1897 consensus_11454#4 TTTTTTCGTGCATGCATGAAGTACTTGCTAGATATTCTGTGTCAATCTGAGTATTTGCAG 479 *** ***** ******* * * * * * * *** * * * consensus_11454#1 CAGGAAATTTTA-TATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTG 589 consensus_11454#3 CAGGAAATTTTA-TATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTG 513 consensus_11454#2 CAGGAAATTTTA-TATCAATCATCGGTCATCATGTAATCTTCAGACTCGTTGGGTGTTTG 508 consensus_11454#0 CAGGAAATTTTA-TATCAATCATCGGTCATCATGTAATCTTCAGACTCGTCGGGTGTTTG 1956 consensus_11454#4 CTGTAGGCACAAATAGTAACTAGAAGACTTCA---AACATCCAAGCTATTTGAGTGTATG 536 * * * * ** ** * * * *** ** * ** ** * * **** ** consensus_11454#1 A-CACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATT 648 consensus_11454#3 A-CACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTT-CCACGCAATT 571 consensus_11454#2 A-CACCCAAAATCATACATTTGAGATAATTAGATTGGCGGAATTTTTTTTCGAGGCAATT 567 consensus_11454#0 A-CACCCAAAATCATACATCTGAGATAGTTAGACTGGCCGAATTTTTTTTCCACGCAATT 2015 consensus_11454#4 AACATTGAANATCTTGTA-CTGACGTATATATAA-AATGAAATCGTCCAACGAGATG--- 591 * ** ** *** * * *** ** ** * *** * * * consensus_11454#1 TATGTAGGATTATAAG--TAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAA 706 consensus_11454#3 TATGTAGGATTATAAG--TAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAA 629 consensus_11454#2 TATTTAGGATTATAACGCCACCAGAGGCGCAGGTGGTGGCTCGCCGGCGCGGAGGCGGAG 627 consensus_11454#0 TATGTAGGATTATAAG--TAGTTTATTCAAAAGTAGAATTGTATGTGCTGTACTTCACAA 2073 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 CTAGGTT-CTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAGGGA----------- 754 consensus_11454#3 CTTGTTTTCTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAAAAAAA--------- 680 consensus_11454#2 GAAGTGGGCGACGCCATGGGGATGGGGGATCCCTCGATTCGATCTGAATTCGAATTGAAT 687 consensus_11454#0 CTTGTTTTCTATAAAATAAACAAAAAGTGTATTTCTTGTAAAAAAAAAAAAAAAAAA--- 2130 consensus_11454#4 ------------------------------------------------------------ consensus_11454#1 ------------------------------------------------------- consensus_11454#3 ------------------------------------------------------- consensus_11454#2 TTTAGTGAATTTAATCGAATTGATCGCCTCCTCCTCTCGATTCGCCAGATTTTAT 742 consensus_11454#0 ------------------------------------------------------- consensus_11454#4 ------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||