cluster # 11462

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Oryza sativa
cluster # 11462 cluster # 11462 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11462#0 length = 1113 sequences # 6
consensus_11462#1 length = 675 sequences # 1

consensus_11462#2 length = 485 sequences # 1
consensus_11462#3 length = 462 sequences # 1

consensusID : consensus_11462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1113
fasta sequence

                              [ATCAAGATGGCTTTGGCCACATAGGAAATC-CATTATTCAAAATAAACATTTAAGATAGGGTTACATAAAGTTATTCACTGTAACCTTCAATATACATTGGTTGGAGCTGGAATAATATCATCCAGCATGATTGCAGATACACATGCTACGTATGAAGCATATGTTTGATTTCTTCTTCATTATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTGAAATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCGAACCCAGTGGCTGCCACCATCATGCCATGCCAAGCTTCCGAACGTGTAGCCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGACAGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCGTC-GTGCAGTTGTCTTGTGAGCCTAGTCCTCCCATGCAGTTGAAGAACTTGAGGTAATCTGATGGGTTGATGTCATAGATGAGGCCTGGATCAGCC-GCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGGGATCGGCAATCTTTGGAACTCTTCCATTAGCTTGCATAGGCATCCCATTGTTGTCAAAGGTATTTGCTGTAGTCATAATTGCAGATTTGAGGGCAGCGGGTGACCATTTAGGATGAAGGGACTTGAGCACCGCAATGATCCCAGATACATGTGGGCAAGCCATAGATGTTCCAGACTGAAAATGGTAGGGAACACCTTTGAACTCTGGAGTATTTGGTGAAGCAGCTAAAATCGCAACCCCTGGTGCAGCAATGTCTGGCTTGAGAACCTCAGGATAGATATAACTAGGGCCCCTCGATGAGAAAGCTGCTATTTTGGGAGCAGAATTTTCACTTCCCACCGTTGTCTTGGTTAATGATATCTTCGCCCTTGGCATGTTACCATTTTCATTAC]

[+] EMBL CB627086             [ATCAAGATGGCTTTGGCCACATAGGAAATC CACTATTCAAAATAAACATTTAAGATAGGGTTACATAAAGTTATTCACTGTAACCTTCAATATACATTGGTTGGAGCTGGAATAATATCATCCAGCATGATTGCAGATACACATGCTACGTATGAAGCATATGTTTGATTTCTTCTTCATTATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTGAAATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCGAACCCAGTGGCTGCCACCATCATGCCATGCCAAGCTTCCGAACGTGTAGCCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGACAGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCGTC GTGCAGTTGTCTTGTGAGCCTAGTCCTCCCATGCAGTTGAAGAACTTGAGGTAATCTGATGGGTTGATGTCATAGATGAGGCCTGGATCAGCC GCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGGGATCGGCAATCTTTGGAACTCTTCCATTAGCTTGCATAGGCATCCCATT                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB633912             [   AAGATGGCTTTGGCCACATCGTAAAACACATTATTCAAAATAAACATTTAAGATAGGGTTACATAAAGTTATTCACTGTAACCTTCAATATACCTTGGTTGGAGCTGGAATAATATCATCCAGCATGATTGCAGATACACATGCTACGTATGAAGCATATGTTTGATTTCTTCTTCATTATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTGAAATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCAAACCCAGTGGCTGCCACCATCATGCCATGCCAAGCTTCCAAACGTGTAGCCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGACAGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCGTC GTGCAGTTGTCTTGTGAGCCTAGTCCTCCCATGCAGTTGAAAAACTTGAGGTAATCTGATGGGTTGATGTCATATATGAGGCCTGGATCAACC GCCATG                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB633731             [                CCACATAGGAAATC CTTTATTCAAAATAAACATTTAAGATAGGGTTACATAAAGTTATTCACTGTAACCTTCAATATACATTGGTTGCAGCTGGAATAATATCATCCAGCATGATTGCAGATACACATGCTACGTATGAAGCATATGTTTGATTTCTTCTTCATTATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTGAAATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCGAACCCAGTGGCTGCCACCATCATGCCATGCCAAGCTTCCGAACGTGTAGCCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGACAGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCGTC GTGCAGTTGTCTTGTGAGCCTAGTCCTCCCATGCAGTTGAAGAACTTGAGGTAATCTGATGGGTTGATGTCATAGATGAGGCCTGGATCAGCC GCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGGGATCGGCAATCTTTGGAACTCTTCCATTAGCTTGCAT                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB628046             [                                ATTATTCCTTATAAACATTTAAGATAGGGTTACATAAAGTTATTCACTGTAACCTTCAATATACATTGGTTGGAGCTGGAATAATATCATCCAGCATGATTGCAAATACACATGCTACGAATGAAACATATGTTTGATTTCTTCTTCATTATTTATGTTGATCTCTGATCAACTAACATTATATGAAGCTAGCATGTGAAATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCCAACCCAATGGCTGCCACCATCATGCCATGCCAAGCTTCCGAACGTGTAACCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGACAGTGCCCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCCTC GTGCAATTGTCTTGAGAGCCTAATCCTCCCATGCAATTGAAAAACTTGAGGTAATCTGATGGGTTGATGTCATAGATGAGGCCTGGATCAGCC GCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGGGATCG                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB627960             [                                                                                          ATATAAATTGGTTGCCCCTGGAATAATATCATCCAGCATGATTGCAGATACACATGCTACGTATGAAGCATATGTTTGATTTCTTCTTCATTATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTGAAATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCGAACCCAGTGGCTGCCACCATCATGCCATGCCAAGCTTCCGAACGTGTAGCCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGACAGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCGTC GTGCAGTTGTCTTGTGAGCCTAGTCCTCCCATGCAGTTGAAGAACTTGAGGTAATCTGATGGGTTGATGTCATAAATGAGGCCTGGATCAGCC GCCATGATCGGATTAACAAAGCCTGCTCCATAAT                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BI118636             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTGCTGGTCACCAACATTAGTGACAGTGCGCACCGCAGTTTGGGATGTCCTAAGGTTGGGAATGGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCCTTTGTCGCCAGTGCAATTGGCTTGTGAGCCTAGTCCTCCCATGCAGTTGAAGAACTTGAGGTAATCTGATGGGTTGATGTCATAGATGAGGCCTGGATCAGCCGGCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGGGATCGGCAATCTTTGGAACTCTTCCATTAGCTTGAATAGGCATCCCATTGTTGTCAAAGGTATTTGCTGTAGTCATAATTGCAGATTTGAGGGCAGCGGGTGACCATTTAGGATGAAGGGACTTGAGCACCGCAATGATCCCAGATACATGTGGGCAAGCCATAGATGTTCCAGACTGAAAATGGTAGGGAACACCTTTGAACTCTGGAGTATTTGGTGAAGCAGCTAAAATCGCAACCCCTGGTGCAGCAATGTCTGGCTTGAGAACCTCAGGATAGATATAACTAGGGCCCCTCGATGAGAAAGCTGCTATTTTGGGAGCAGAATTTTCACTTCCCACCGTTGTCTTGGTTAATGATATCTTCGCCCTTGGCATGTTACCATTTTCATTAC]




>consensus_11462#0
ATCAAGATGGCTTTGGCCACATAGGAAATCCATTATTCAAAATAAACATTTAAGATAGGG
TTACATAAAGTTATTCACTGTAACCTTCAATATACATTGGTTGGAGCTGGAATAATATCA
TCCAGCATGATTGCAGATACACATGCTACGTATGAAGCATATGTTTGATTTCTTCTTCAT
TATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTGAAATCAGGAAA
TATTGGAGTATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCGAACCCAGTGGC
TGCCACCATCATGCCATGCCAAGCTTCCGAACGTGTAGCCCCCCTGGACCTTCCGTGTCG
CCTTGAAGGTCACCTTGAAGCTTTGATCCTTCTTGTCCTTGCTGAACACCAACTCTGATG
GCTCGACGGCCATCTTGATTCCTGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTT
GCTGGTCACCAACGTTAGTGACAGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAA
TAGCAATCGATGGCAGGTTCAAGTCAATCACGGATCCTTTTGTCGTCGTGCAGTTGTCTT
GTGAGCCTAGTCCTCCCATGCAGTTGAAGAACTTGAGGTAATCTGATGGGTTGATGTCAT
AGATGAGGCCTGGATCAGCCGCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGG
GATCGGCAATCTTTGGAACTCTTCCATTAGCTTGCATAGGCATCCCATTGTTGTCAAAGG
TATTTGCTGTAGTCATAATTGCAGATTTGAGGGCAGCGGGTGACCATTTAGGATGAAGGG
ACTTGAGCACCGCAATGATCCCAGATACATGTGGGCAAGCCATAGATGTTCCAGACTGAA
AATGGTAGGGAACACCTTTGAACTCTGGAGTATTTGGTGAAGCAGCTAAAATCGCAACCC
CTGGTGCAGCAATGTCTGGCTTGAGAACCTCAGGATAGATATAACTAGGGCCCCTCGATG
AGAAAGCTGCTATTTTGGGAGCAGAATTTTCACTTCCCACCGTTGTCTTGGTTAATGATA
TCTTCGCCCTTGGCATGTTACCATTTTCATTAC

consensusID : consensus_11462#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence

                              [TTTTTTTTTTTTTTTTAACACAAGATTAGATATATTATTCAACCATAAATTTTAACAGATATACGCCACTTGGATTTGGAATAAGATGCAGCAAGATTCCAGAAACACATATAACATGCTATATATTGGAGCATATGAATTCGCCTTCATTTATTCCATTCGACCATTGATCAACTAGCATCATTAGTAGCTAGCATATATATCCAATATCCAATTAATTAGGAGATCTTGGAGTAGATCTCCTCAATCACGATACGAACGGCGATGGGGATCCGAACCCAGGGGCTGCCTCCATCATGCCATGCCAAGCTTCCAAACCTGTAGTCACCCTGCACCTTTCGTGTAGCCTTGAAGGTCACCCTGAAGCTCTGCACTCTTCTCTGCACTCTTCCGTCCTTGTTGAACACCAGCACTGGTGGCTCGACGGCCATCTCGACACCAGCTGGAGCTTGGAAGAATGCCTTATACACGGCATTAACTTGGCCAACATTGGTGACAGTGCGTGTCATAGCTTGGAATGTCCTAAGGTTAGGGATGGCAATGGATGGGGAGGTTCAGGTCAGTAAGTGATCCTTTCGCTGTGGTGCAATTGTCCCCTGAGCCTAATCCTCCCATGCAGTTGAAGAATTTGAGGTAATCAGATGCGGGGGATGTCGTAAATAAGGCCTGGATCAG]

[+] EMBL CA762787             [TTTTTTTTTTTTTTTTAACACAAGATTAGATATATTATTCAACCATAAATTTTAACAGATATACGCCACTTGGATTTGGAATAAGATGCAGCAAGATTCCAGAAACACATATAACATGCTATATATTGGAGCATATGAATTCGCCTTCATTTATTCCATTCGACCATTGATCAACTAGCATCATTAGTAGCTAGCATATATATCCAATATCCAATTAATTAGGAGATCTTGGAGTAGATCTCCTCAATCACGATACGAACGGCGATGGGGATCCGAACCCAGGGGCTGCCTCCATCATGCCATGCCAAGCTTCCAAACCTGTAGTCACCCTGCACCTTTCGTGTAGCCTTGAAGGTCACCCTGAAGCTCTGCACTCTTCTCTGCACTCTTCCGTCCTTGTTGAACACCAGCACTGGTGGCTCGACGGCCATCTCGACACCAGCTGGAGCTTGGAAGAATGCCTTATACACGGCATTAACTTGGCCAACATTGGTGACAGTGCGTGTCATAGCTTGGAATGTCCTAAGGTTAGGGATGGCAATGGATGGGGAGGTTCAGGTCAGTAAGTGATCCTTTCGCTGTGGTGCAATTGTCCCCTGAGCCTAATCCTCCCATGCAGTTGAAGAATTTGAGGTAATCAGATGCGGGGGATGTCGTAAATAAGGCCTGGATCAG]




>consensus_11462#1
TTTTTTTTTTTTTTTTAACACAAGATTAGATATATTATTCAACCATAAATTTTAACAGAT
ATACGCCACTTGGATTTGGAATAAGATGCAGCAAGATTCCAGAAACACATATAACATGCT
ATATATTGGAGCATATGAATTCGCCTTCATTTATTCCATTCGACCATTGATCAACTAGCA
TCATTAGTAGCTAGCATATATATCCAATATCCAATTAATTAGGAGATCTTGGAGTAGATC
TCCTCAATCACGATACGAACGGCGATGGGGATCCGAACCCAGGGGCTGCCTCCATCATGC
CATGCCAAGCTTCCAAACCTGTAGTCACCCTGCACCTTTCGTGTAGCCTTGAAGGTCACC
CTGAAGCTCTGCACTCTTCTCTGCACTCTTCCGTCCTTGTTGAACACCAGCACTGGTGGC
TCGACGGCCATCTCGACACCAGCTGGAGCTTGGAAGAATGCCTTATACACGGCATTAACT
TGGCCAACATTGGTGACAGTGCGTGTCATAGCTTGGAATGTCCTAAGGTTAGGGATGGCA
ATGGATGGGGAGGTTCAGGTCAGTAAGTGATCCTTTCGCTGTGGTGCAATTGTCCCCTGA
GCCTAATCCTCCCATGCAGTTGAAGAATTTGAGGTAATCAGATGCGGGGGATGTCGTAAA
TAAGGCCTGGATCAG

consensusID : consensus_11462#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence

                              [CNCGATGGTTTAGCCACATAGCAAATCCNTTATTTAAGATAGGGTTACCTAAAATTATTCACTGTAACCTTAAATATAGACTGGTTGGAGCTGGAATAATATATATCCAGCATGATTGCAGATACATATGCTATGTATCAAGCTTATGATTGATTTCTTCTTCATTATTTAGATTTGATCAGAGCTAGCATTATATGAAGCTAACATATCGAATTAGGAAATATTGGAATATATCTCTTCAATCACATTGCGAACGGCGATGGGGATGCGAACCCAGTGGCTGCCTCCATCATGCCATGCCAAGCTTCCAAATGTGTAGTCCCCATGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTCTGATCCTTCTTGTCCTTGCTGAACACCAGCTCTGGTGGCTCGACGGCCATCTCGATTCCTGCAGGAGGCTCGAGGAAAGCTTTGTACACAGCATCATGCTGGTCACCAACGTTAGTGACAG]

[-] EMBL BQ908068             [CNCGATGGTTTAGCCACATAGCAAATCCNTTATTTAAGATAGGGTTACCTAAAATTATTCACTGTAACCTTAAATATAGACTGGTTGGAGCTGGAATAATATATATCCAGCATGATTGCAGATACATATGCTATGTATCAAGCTTATGATTGATTTCTTCTTCATTATTTAGATTTGATCAGAGCTAGCATTATATGAAGCTAACATATCGAATTAGGAAATATTGGAATATATCTCTTCAATCACATTGCGAACGGCGATGGGGATGCGAACCCAGTGGCTGCCTCCATCATGCCATGCCAAGCTTCCAAATGTGTAGTCCCCATGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTCTGATCCTTCTTGTCCTTGCTGAACACCAGCTCTGGTGGCTCGACGGCCATCTCGATTCCTGCAGGAGGCTCGAGGAAAGCTTTGTACACAGCATCATGCTGGTCACCAACGTTAGTGACAG]




>consensus_11462#2
CNCGATGGTTTAGCCACATAGCAAATCCNTTATTTAAGATAGGGTTACCTAAAATTATTC
ACTGTAACCTTAAATATAGACTGGTTGGAGCTGGAATAATATATATCCAGCATGATTGCA
GATACATATGCTATGTATCAAGCTTATGATTGATTTCTTCTTCATTATTTAGATTTGATC
AGAGCTAGCATTATATGAAGCTAACATATCGAATTAGGAAATATTGGAATATATCTCTTC
AATCACATTGCGAACGGCGATGGGGATGCGAACCCAGTGGCTGCCTCCATCATGCCATGC
CAAGCTTCCAAATGTGTAGTCCCCATGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAA
GCTCTGATCCTTCTTGTCCTTGCTGAACACCAGCTCTGGTGGCTCGACGGCCATCTCGAT
TCCTGCAGGAGGCTCGAGGAAAGCTTTGTACACAGCATCATGCTGGTCACCAACGTTAGT
GACAG

consensusID : consensus_11462#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence

                              [GGAAATCCCTTATTCCAAATAAACATTTAAAAAAGGGGTACATAAAGTTATTCACTGGAACCTTCAATATACATTGGGTGGAGCTGGAATAATATCCTCCCACATGATTGCAAAAACACATGCTACCTATGAAACATATGTTTGATTTCTTCTTCATTATTTATGGTGATCTCCGATCCACTAACATTATATGAAACTAACATGTGAAATCAGGAAATATTGGAATATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCCAACCCCGGGGGTGCCACCATCATGCCATGCCAAGCTTCCCAACGTGTAACCCCCCTGGACCTTCCCTGTCGCCTTGAAGGGCACCTTGAAACTTTGATCCTTCTTGGCCTTGCTGAACACCAACTCTGATGGGTCCACGGGCATCTTGATTCCTGCAAGAGGGTCAAGGAAAACTTTTTACACCACCCCTTGCTGG]

[+] EMBL CB631497             [GGAAATCCCTTATTCCAAATAAACATTTAAAAAAGGGGTACATAAAGTTATTCACTGGAACCTTCAATATACATTGGGTGGAGCTGGAATAATATCCTCCCACATGATTGCAAAAACACATGCTACCTATGAAACATATGTTTGATTTCTTCTTCATTATTTATGGTGATCTCCGATCCACTAACATTATATGAAACTAACATGTGAAATCAGGAAATATTGGAATATATCTCTTCAATCACAATGCGAACTGCGATGGGGATTCCAACCCCGGGGGTGCCACCATCATGCCATGCCAAGCTTCCCAACGTGTAACCCCCCTGGACCTTCCCTGTCGCCTTGAAGGGCACCTTGAAACTTTGATCCTTCTTGGCCTTGCTGAACACCAACTCTGATGGGTCCACGGGCATCTTGATTCCTGCAAGAGGGTCAAGGAAAACTTTTTACACCACCCCTTGCTGG]




>consensus_11462#3
GGAAATCCCTTATTCCAAATAAACATTTAAAAAAGGGGTACATAAAGTTATTCACTGGAA
CCTTCAATATACATTGGGTGGAGCTGGAATAATATCCTCCCACATGATTGCAAAAACACA
TGCTACCTATGAAACATATGTTTGATTTCTTCTTCATTATTTATGGTGATCTCCGATCCA
CTAACATTATATGAAACTAACATGTGAAATCAGGAAATATTGGAATATATCTCTTCAATC
ACAATGCGAACTGCGATGGGGATTCCAACCCCGGGGGTGCCACCATCATGCCATGCCAAG
CTTCCCAACGTGTAACCCCCCTGGACCTTCCCTGTCGCCTTGAAGGGCACCTTGAAACTT
TGATCCTTCTTGGCCTTGCTGAACACCAACTCTGATGGGTCCACGGGCATCTTGATTCCT
GCAAGAGGGTCAAGGAAAACTTTTTACACCACCCCTTGCTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11462#0      ATCAAGATGGCTTTGGCCACATAGGAAATCCATTATTCAAAATAAAC-ATTTAAGATAGG 59
consensus_11462#3      -----------------------GGAAATCCCTTATTCCAAATAAAC-ATTTAAAAAAGG 36
consensus_11462#2      -----------------CNCGATGGTTTAGCCACATAGCAAATCCNTTATTTAAGATAGG 43
consensus_11462#1      ------------------------------------TTTTTTTTTTTTTTTTAACACAAG 24
                                                                 *      ***** * * *

consensus_11462#0      GTTACATAAAGTTATTCACTGTAACCTTCAA----TATACATTGGTTGGAGCTGGAATAA 115
consensus_11462#3      GGTACATAAAGTTATTCACTGGAACCTTCAA----TATACATTGGGTGGAGCTGGAATAA 92
consensus_11462#2      GTTACCTAAAATTATTCACTGTAACCTTAAA----TATAGACTGGTTGGAGCTGGAATAA 99
consensus_11462#1      ATTAGATATATTATTCAACCATAAATTTTAACAGATATACGCCACTTGGATTTGGAATAA 84
                         **  ** * *  *  **   **  ** **    ****       ****  ********

consensus_11462#0      TAT-CATCCAGCATGATTGCAGATACACATGCTACGTATGAAGCAT----ATGTTTGATT 170
consensus_11462#3      TAT-CCTCCCACATGATTGCAAAAACACATGCTACCTATGAAACAT----ATGTTTGATT 147
consensus_11462#2      TATATATCCAGCATGATTGCAGATACATATGCTATGTATCAAGCTT----ATGATTGATT 155
consensus_11462#1      GAT----GCAGCAAGATTCCAGAAACACATATAACATGCTATATATTGGAGCATATGAAT 140
                        **     *  ** **** ** * *** **   *  *   *    *         *** *

consensus_11462#0      TCTTCTTCATT-ATTTATGTTGATCTCTGATCAACTAGCATTATATGAAGCTAGCATGTG 229
consensus_11462#3      TCTTCTTCATT-ATTTATGGTGATCTCCGATCCACTAACATTATATGAAACTAACATGTG 206
consensus_11462#2      TCTTCTTCATT-ATTTA-GATTTGATCAGA---GCTAGCATTATATGAAGCTAACATATC 210
consensus_11462#1      TCGCCTTCATTTATTCCATTCGACCATTGATCAACTAGCATCATTAGTAGCTAGCATATA 200
                       **  ******* ***             **    *** *** **  * * *** *** * 

consensus_11462#0      AA---------------ATCAGGAAATATTGGAGTATATCTCTTCAATCACAATGCGAAC 274
consensus_11462#3      AA---------------ATCAGGAAATATTGGAATATATCTCTTCAATCACAATGCGAAC 251
consensus_11462#2      GA---------------ATTAGGAAATATTGGAATATATCTCTTCAATCACATTGCGAAC 255
consensus_11462#1      TATCCAATATCCAATTAATTAGGAGATCTTGGAGTAGATCTCCTCAATCACGATACGAAC 260
                        *               ** **** ** ***** ** ***** ********  * *****

consensus_11462#0      TGCGATGGGGATTCGAACCCAGTGGCTGCCACCATCATGCCATGCCAAGCTTCCGAACGT 334
consensus_11462#3      TGCGATGGGGATTCCAACCCCGGGGGTGCCACCATCATGCCATGCCAAGCTTCCCAACGT 311
consensus_11462#2      GGCGATGGGGATGCGAACCCAGTGGCTGCCTCCATCATGCCATGCCAAGCTTCCAAATGT 315
consensus_11462#1      GGCGATGGGGATCCGAACCCAGGGGCTGCCTCCATCATGCCATGCCAAGCTTCCAAACCT 320
                        *********** * ***** * ** **** *********************** **  *

consensus_11462#0      GTAGCCCCCCTGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTTTG-ATCCTTCT 393
consensus_11462#3      GTAACCCCCCTGGACCTTCCCTGTCGCCTTGAAGGGCACCTTGAAACTTTG-ATCCTTCT 370
consensus_11462#2      GTAGTCCCCATGGACCTTCCGTGTCGCCTTGAAGGTCACCTTGAAGCTCTG-ATCCTTCT 374
consensus_11462#1      GTAGTCACCCTGCACCTTTCGTGTAGCCTTGAAGGTCACCCTGAAGCTCTGCACTCTTCT 380
                       ***  * ** ** ***** * *** ********** **** **** ** ** *  *****

consensus_11462#0      T-----------GTCCTTGCTGAACACCAACTCTGATGGCTCGACGGCCATCTTGATTCC 442
consensus_11462#3      T-----------GGCCTTGCTGAACACCAACTCTGATGGGTCCACGGGCATCTTGATTCC 419
consensus_11462#2      T-----------GTCCTTGCTGAACACCAGCTCTGGTGGCTCGACGGCCATCTCGATTCC 423
consensus_11462#1      CTGCACTCTTCCGTCCTTGTTGAACACCAGCACTGGTGGCTCGACGGCCATCTCGACACC 440
                                   * ***** ********* * *** *** ** **** ***** **  **

consensus_11462#0      TGCAGGAGGCTCAAGGAAAGCTTTGTACACGACCTCTTGCTGGTCACCAACGTTAGTGAC 502
consensus_11462#3      TGCAAGAGGGTCAAGGAAAACTTTTTACACCACCCCTTGCTGG----------------- 462
consensus_11462#2      TGCAGGAGGCTCGAGGAAAGCTTTGTACACAGCATCATGCTGGTCACCAACGTTAGTGAC 483
consensus_11462#1      AGCTGGAGCTTGGAAGAATGCCTTATACACGGCATTAACTTGG---CCAACATTGGTGAC 497
                        **  ***  *  * ***  * ** *****  *       ***                 

consensus_11462#0      AGTGCGCACCGCAGTTTGTGATGTCCTAAGGTTGGGAATAGCAATCGATGGC-AGGTTCA 561
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      AG---------------------------------------------------------- 485
consensus_11462#1      AGTGCGTGTCATAGCTTGGAATGTCCTAAGGTTAGGGATGGCAATGGATGGGGAGGTTCA 557
                                                                                   

consensus_11462#0      AGTCAATCACGGATCCTTTTGTCGTCGTGCAGTTGTCTTGTGAGCCTAGTCCTCCCATGC 621
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      GGTCAGTAAGTGATCCTTTCGCTGTGGTGCAATTGTCCCCTGAGCCTAATCCTCCCATGC 617
                                                                                   

consensus_11462#0      AGTTGAAGAACTTGAGGTAATCTGATG-GGTTGATGTCATAGATGAGGCCTGGATCAGCC 680
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      AGTTGAAGAATTTGAGGTAATCAGATGCGGGGGATGTCGTAAATAAGGCCTGGATCAG-- 675
                                                                                   

consensus_11462#0      GCCATGATCGGATTAACAAAGCCTGCTCCATAATCAAAGGGATCGGCAATCTTTGGAACT 740
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      CTTCCATTAGCTTGCATAGGCATCCCATTGTTGTCAAAGGTATTTGCTGTAGTCATAATT 800
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      GCAGATTTGAGGGCAGCGGGTGACCATTTAGGATGAAGGGACTTGAGCACCGCAATGATC 860
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      CCAGATACATGTGGGCAAGCCATAGATGTTCCAGACTGAAAATGGTAGGGAACACCTTTG 920
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      AACTCTGGAGTATTTGGTGAAGCAGCTAAAATCGCAACCCCTGGTGCAGCAATGTCTGGC 980
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      TTGAGAACCTCAGGATAGATATAACTAGGGCCCCTCGATGAGAAAGCTGCTATTTTGGGA 1040
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      GCAGAATTTTCACTTCCCACCGTTGTCTTGGTTAATGATATCTTCGCCCTTGGCATGTTA 1100
consensus_11462#3      ------------------------------------------------------------
consensus_11462#2      ------------------------------------------------------------
consensus_11462#1      ------------------------------------------------------------
                                                                                   

consensus_11462#0      CCATTTTCATTAC 1113
consensus_11462#3      -------------
consensus_11462#2      -------------
consensus_11462#1      -------------